src - OpenGrok history log for /honee/src

Revision	Date	Author	Comments (<<< Hide modified files) (Show modified files >>>)
b6fc2dcf	02-Apr-2024	James Wright <james@jameswright.xyz>	fluids: Cleanup SetupStrongSTG_Ceed a bit strong_boundary_conditions.c
c2376cc9	02-Apr-2024	James Wright <james@jameswright.xyz>	fix(fluids): Enable strong STG for explicit timestepping Also add error catching if SGS is requested for explicit; it's not implemented at the moment. setuplibceed.c
0f1db789	02-Apr-2024	James Wright <james@jameswright.xyz>	fix(fluids): Catch SetupStrongStg_QF strong_boundary_conditions.c
5faddc94	20-Feb-2024	James Wright <james@jameswright.xyz>	fix(fluids): Update to new isoperiodic API Dependent on changes in https://gitlab.com/petsc/petsc/-/merge_requests/7305 /honee/navierstokes.h /honee/qfunctions/advection.h /honee/qfunctions/advection_types.h /honee/qfunctions/bc_freestream.h /honee/qfunctions/bc_freestream_type.h /honee/qfunctions/bc_slip.h /honee/qfunctions/blasius.h /honee/qfunctions/channel.h /honee/qfunctions/densitycurrent.h /honee/qfunctions/differential_filter.h /honee/qfunctions/eulervortex.h /honee/qfunctions/gaussianwave.h /honee/qfunctions/grid_anisotropy_tensor.h /honee/qfunctions/inverse_multiplicity.h /honee/qfunctions/mass.h /honee/qfunctions/newtonian.h /honee/qfunctions/newtonian_state.h /honee/qfunctions/newtonian_types.h /honee/qfunctions/riemann_solver.h /honee/qfunctions/setupgeo.h /honee/qfunctions/setupgeo2d.h /honee/qfunctions/setupgeo_helpers.h /honee/qfunctions/sgs_dd_model.h /honee/qfunctions/sgs_dd_training.h /honee/qfunctions/sgs_dd_utils.h /honee/qfunctions/shocktube.h /honee/qfunctions/stabilization.h /honee/qfunctions/stabilization_types.h /honee/qfunctions/stg_shur14.h /honee/qfunctions/stg_shur14_type.h /honee/qfunctions/strong_boundary_conditions.h /honee/qfunctions/taylorgreen.h /honee/qfunctions/turb_spanstats.h /honee/qfunctions/turb_stats_types.h /honee/qfunctions/utils.h /honee/qfunctions/utils_eigensolver_jacobi.h /honee/qfunctions/velocity_gradient_projection.h turb_spanstats.c
dc936754	27-Mar-2024	Jeremy L Thompson <jeremy@jeremylt.org>	minor - update copyright headers /honee/LICENSE /honee/include/ceed-utils.h /honee/include/mat-ceed-impl.h /honee/include/mat-ceed.h /honee/include/petsc_ops.h /honee/include/smartsim.h /honee/navierstokes.c /honee/navierstokes.h /honee/problems/advection.c /honee/problems/bc_freestream.c /honee/problems/bc_slip.c /honee/problems/blasius.c /honee/problems/channel.c /honee/problems/densitycurrent.c /honee/problems/eulervortex.c /honee/problems/gaussianwave.c /honee/problems/newtonian.c /honee/problems/sgs_dd_model.c /honee/problems/shocktube.c /honee/problems/stg_shur14.c /honee/problems/stg_shur14.h /honee/problems/taylorgreen.c /honee/qfunctions/advection.h /honee/qfunctions/advection_types.h /honee/qfunctions/bc_freestream.h /honee/qfunctions/bc_freestream_type.h /honee/qfunctions/bc_slip.h /honee/qfunctions/blasius.h /honee/qfunctions/channel.h /honee/qfunctions/densitycurrent.h /honee/qfunctions/differential_filter.h /honee/qfunctions/differential_filter_enums.h /honee/qfunctions/eulervortex.h /honee/qfunctions/gaussianwave.h /honee/qfunctions/grid_anisotropy_tensor.h /honee/qfunctions/mass.h /honee/qfunctions/newtonian.h /honee/qfunctions/newtonian_state.h /honee/qfunctions/newtonian_types.h /honee/qfunctions/riemann_solver.h /honee/qfunctions/setupgeo.h /honee/qfunctions/setupgeo2d.h /honee/qfunctions/setupgeo_helpers.h /honee/qfunctions/sgs_dd_model.h /honee/qfunctions/sgs_dd_training.h /honee/qfunctions/sgs_dd_utils.h /honee/qfunctions/shocktube.h /honee/qfunctions/stabilization.h /honee/qfunctions/stabilization_types.h /honee/qfunctions/stg_shur14.h /honee/qfunctions/stg_shur14_type.h /honee/qfunctions/strong_boundary_conditions.h /honee/qfunctions/taylorgreen.h /honee/qfunctions/turb_spanstats.h /honee/qfunctions/turb_stats_types.h /honee/qfunctions/utils.h /honee/qfunctions/utils_eigensolver_jacobi.h /honee/qfunctions/velocity_gradient_projection.h /honee/smartsim_regression_framework.py cloptions.c differential_filter.c dm_utils.c grid_anisotropy_tensor.c misc.c petsc_ops.c setupdm.c setuplibceed.c setupts.c smartsim/sgs_dd_training.c smartsim/smartsim.c smartsim_weak.c strong_boundary_conditions.c turb_spanstats.c velocity_gradient_projection.c
601c5b70	22-Mar-2024	James Wright <james@jameswright.xyz>	Merge pull request #1530 from CEED/jrwrigh/matceed_errors Fluids/MatCeed: Print lengths in PetscChecks mat-ceed.c
4c17272b	22-Mar-2024	James Wright <james@jameswright.xyz>	fluids(matceed): Print lengths in PetscChecks mat-ceed.c
795c5782	22-Mar-2024	James Wright <james@jameswright.xyz>	Merge pull request #1529 from CEED/jrwrigh/fix_multiplicity_training fluids: Fix SmartSim training multiplicity, add GetInverseMultiplicity /honee/.clang-tidy /honee/navierstokes.h /honee/problems/sgs_dd_model.c /honee/qfunctions/inverse_multiplicity.h /honee/qfunctions/sgs_dd_training.h /honee/qfunctions/sgs_dd_utils.h /honee/smartsim_regression_framework.py dm_utils.c inverse_multiplicity.c smartsim/sgs_dd_training.c /honee/tests-output/y0_output.npy
5930f037	21-Mar-2024	James Wright <james@jameswright.xyz>	fluids: Add GetInverseMultiplicity /honee/navierstokes.h /honee/problems/sgs_dd_model.c /honee/qfunctions/inverse_multiplicity.h /honee/qfunctions/sgs_dd_utils.h dm_utils.c inverse_multiplicity.c smartsim/sgs_dd_training.c
ee6b0099	21-Mar-2024	James Wright <james@jameswright.xyz>	fluids: Fix multiplicity for SGS training Multiplicity needs to account for GlobalToLocal multiplicity as well, since we put the global Vec into the training database smartsim/sgs_dd_training.c
990f1db0	18-Mar-2024	Jed Brown <jed@jedbrown.org>	fluids: enable reading checkpoint files as i32 or i64 (#1520) * fluids: enable reading checkpoint files as i32 or i64 Depends on https://gitlab.com/petsc/petsc/-/merge_requests/7377 * Apply su fluids: enable reading checkpoint files as i32 or i64 (#1520) * fluids: enable reading checkpoint files as i32 or i64 Depends on https://gitlab.com/petsc/petsc/-/merge_requests/7377 * Apply suggestions from code review Co-authored-by: James Wright <james@jameswright.xyz> --------- Co-authored-by: James Wright <james@jameswright.xyz> show more ... misc.c
47683d52	15-Mar-2024	James Wright <james@jameswright.xyz>	Merge pull request #1519 from lindsayad/update-dmplex-filter Update to DMPlexFilter in PETSc 3.21 /honee/navierstokes.h turb_spanstats.c
56aab853	14-Mar-2024	Alex Lindsay <alexander.lindsay@inl.gov>	Update to DMPlexFilter in PETSc 3.21 /honee/navierstokes.c /honee/navierstokes.h turb_spanstats.c
c05653ab	14-Mar-2024	James Wright <james@jameswright.xyz>	Merge pull request #1517 from CEED/jrwrigh/ratel_sync fluids: Sync with Ratel changes /honee/include/ceed-utils.h /honee/include/mat-ceed-impl.h /honee/include/petsc_ops.h /honee/navierstokes.h /honee/problems/sgs_dd_model.c dm_utils.c grid_anisotropy_tensor.c mat-ceed.c misc.c petsc_ops.c setuplibceed.c setupts.c smartsim/sgs_dd_training.c turb_spanstats.c
b1489633	14-Mar-2024	James Wright <james@jameswright.xyz>	fluids: Catch if no options passed /honee/navierstokes.c /honee/navierstokes.h cloptions.c
95327578	14-Mar-2024	James Wright <james@jameswright.xyz>	fluids: Fix docstring petsc_ops.c
a7dac1d5	14-Mar-2024	James Wright <james@jameswright.xyz>	fluids: Sync with Ratel, get ceed-utils.h /honee/README.md /honee/include/ceed-utils.h /honee/include/mat-ceed-impl.h /honee/include/petsc_ops.h /honee/index.md /honee/navierstokes.c /honee/navierstokes.h /honee/problems/advection.c /honee/problems/sgs_dd_model.c /honee/qfunctions/advection.h /honee/qfunctions/advection_types.h /honee/qfunctions/stabilization_types.h dm_utils.c grid_anisotropy_tensor.c mat-ceed.c misc.c petsc_ops.c setuplibceed.c setupts.c smartsim/sgs_dd_training.c turb_spanstats.c /honee/tests-output/fluids-navierstokes-adv-skew.bin /honee/tests-output/fluids-navierstokes-adv2d-rotation-explicit-stab-su-consistent-mass.bin
25a38295	14-Mar-2024	James Wright <james@jameswright.xyz>	fluids: Fix issues with 64 bit PetscInt builds /honee/README.md /honee/index.md /honee/navierstokes.c /honee/navierstokes.h /honee/problems/advection.c /honee/qfunctions/advection.h /honee/qfunctions/advection_types.h /honee/qfunctions/stabilization_types.h smartsim/smartsim.c /honee/tests-output/fluids-navierstokes-adv-skew.bin /honee/tests-output/fluids-navierstokes-adv2d-rotation-explicit-stab-su-consistent-mass.bin
50f50432	13-Mar-2024	James Wright <james@jameswright.xyz>	fluids(MatCeed): PetscCeedCall -> PetscCallCeed /honee/include/mat-ceed-impl.h mat-ceed.c
1024319b	13-Mar-2024	James Wright <james@jameswright.xyz>	fluids: Add -pmat_pbdiagonal warning cloptions.c
1030794f	13-Mar-2024	James Wright <james@jameswright.xyz>	fluids: Remove old CreateMatShell_Ceed This is fully replaced by MatCeed /honee/include/petsc_ops.h petsc_ops.c
3170c09f	12-Mar-2024	James Wright <james@jameswright.xyz>	fluids: Add KSPSetFromOptions_WithMatCeed /honee/include/petsc_ops.h differential_filter.c grid_anisotropy_tensor.c misc.c petsc_ops.c setupts.c turb_spanstats.c velocity_gradient_projection.c
ebfabadf	12-Mar-2024	James Wright <james@jameswright.xyz>	fluids: Use MatCeed for Jacobian /honee/navierstokes.c /honee/navierstokes.h cloptions.c setupdm.c setuplibceed.c setupts.c
58600ac3	12-Mar-2024	James Wright <james@jameswright.xyz>	fluids: Add MatCeed Code from Ratel /honee/include/mat-ceed-impl.h /honee/include/mat-ceed.h mat-ceed.c
45101827	12-Mar-2024	James Wright <james@jameswright.xyz>	fluids: Make MatShell functions static This is done primarily to allow MatCeed to coexist with the context operators for right now. This has the nasty side-effect of forcing `Mat` objects to be NUL fluids: Make MatShell functions static This is done primarily to allow MatCeed to coexist with the context operators for right now. This has the nasty side-effect of forcing `Mat` objects to be NULL when they're passed into CreateMatShell_Ceed, but that will soon be replaced with MatCeed, so it is only temporary for the transition in this PR show more ... /honee/Makefile /honee/blasius.yaml /honee/include/petsc_ops.h /honee/navierstokes.c differential_filter.c grid_anisotropy_tensor.c petsc_ops.c setupts.c turb_spanstats.c velocity_gradient_projection.c /honee/tests-output/fluids-navierstokes-blasius-bc_slip.bin
1...<<1112 13 14 15 16 17 18 19 20 21