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05c335cb06-Jul-2023 nbeams <246972+nbeams@users.noreply.github.com>

Add headers missed by IWYU to hip-ref


backends/hip-ref/ceed-hip-ref-qfunction-load.cpp
backends/hip-ref/ceed-hip-ref.h
2e31f39606-Jul-2023 James Wright <james@jameswright.xyz>

fluids: Extract simulation printing to function


examples/fluids/navierstokes.c
examples/fluids/navierstokes.h
examples/fluids/src/misc.c
f6f49adb30-Jun-2023 nbeams <246972+nbeams@users.noreply.github.com>

Ensure initialization for new L1 norm handling in GPU backends


backends/cuda-ref/ceed-cuda-ref-vector.c
backends/hip-ref/ceed-hip-ref-vector.c
f7c1b51730-Jun-2023 nbeams <246972+nbeams@users.noreply.github.com>

CUDA: improvements for handling large CeedVectors requiring CeedSize for length


backends/cuda-ref/ceed-cuda-ref-operator.c
backends/cuda-ref/ceed-cuda-ref-vector.c
backends/cuda-ref/kernels/cuda-ref-vector.cu
include/ceed/jit-source/cuda/cuda-ref-operator-assemble-diagonal.h
include/ceed/jit-source/cuda/cuda-ref-operator-assemble.h
3d13c0f229-Jun-2023 nbeams <246972+nbeams@users.noreply.github.com>

Force use of CeedSize in calculating global idx


backends/hip-ref/kernels/hip-ref-vector.hip.cpp
90709ca629-Jun-2023 nbeams <246972+nbeams@users.noreply.github.com>

simplify logic of hipblas use for norm


backends/hip-ref/ceed-hip-ref-vector.c
9330daec28-Jun-2023 nbeams <246972+nbeams@users.noreply.github.com>

HIP: Improve support for CeedVectors that are longer than the max size of 32 bit integers


backends/hip-ref/ceed-hip-ref-operator.c
backends/hip-ref/ceed-hip-ref-vector.c
backends/hip-ref/kernels/hip-ref-vector.hip.cpp
include/ceed/jit-source/hip/hip-ref-operator-assemble-diagonal.h
include/ceed/jit-source/hip/hip-ref-operator-assemble.h
b94338b923-Jun-2023 Jed Brown <jed@jedbrown.org>

CeedVector/Preconditioning: fix CeedInt loop vars to CeedSize

While 32-bit is sufficient for CeedElemRestriction, a Vector is used
to store matrix entries and the number of entries can overflow 32-b

CeedVector/Preconditioning: fix CeedInt loop vars to CeedSize

While 32-bit is sufficient for CeedElemRestriction, a Vector is used
to store matrix entries and the number of entries can overflow 32-bit
even for a small number of dofs. For example, 85k Q3 fluid elements is
enough to overflow.

Reported-by: Ken Jansen

show more ...


interface/ceed-preconditioning.c
interface/ceed-vector.c
6f7ff1d203-Jul-2023 James Wright <james@jameswright.xyz>

fluids: Add partition statistics to standard output


examples/fluids/include/petsc_ops.h
examples/fluids/navierstokes.c
3f46b22403-Jul-2023 Sebastian Grimberg <sebastiangrimb@gmail.com>

Merge pull request #1246 from sebastiangrimberg/sjg/minor-junit-fix

Fix a few missing default output/messages for junit/tap


tests/junit.py
18f23d8515-Jun-2023 Sebastian Grimberg <sjg@amazon.com>

Fix missed cases from 6e6d197


tests/junit.py
7ade40ab03-Jul-2023 Sebastian Grimberg <sebastiangrimb@gmail.com>

Merge pull request #1244 from sebastiangrimberg/sjg/minor-backend-style

Minor whitespace consistency fixes in backends


backends/cuda-gen/ceed-cuda-gen-operator.c
backends/cuda-ref/ceed-cuda-ref-restriction.c
backends/cuda-ref/ceed-cuda-ref-vector.c
backends/hip-ref/ceed-hip-ref-vector.c
backends/hip-ref/ceed-hip-ref.h
backends/sycl-ref/ceed-sycl-ref-basis.sycl.cpp
backends/sycl-ref/ceed-sycl-ref-qfunction-load.sycl.cpp
backends/sycl-ref/ceed-sycl-ref-qfunction.sycl.cpp
backends/sycl-ref/ceed-sycl-ref-qfunctioncontext.sycl.cpp
backends/sycl-ref/ceed-sycl-ref.sycl.cpp
backends/sycl-ref/ceed-sycl-vector.sycl.cpp
backends/sycl-shared/ceed-sycl-shared-basis.sycl.cpp
backends/sycl-shared/ceed-sycl-shared.sycl.cpp
include/ceed/jit-source/sycl/sycl-ref-qfunction.h
ff1e712015-Jun-2023 Sebastian Grimberg <sjg@amazon.com>

Very minor backend style and whitespace fixes


backends/cuda-gen/ceed-cuda-gen-operator.c
backends/cuda-ref/ceed-cuda-ref-restriction.c
backends/cuda-ref/ceed-cuda-ref-vector.c
backends/hip-ref/ceed-hip-ref-vector.c
backends/hip-ref/ceed-hip-ref.h
backends/sycl-ref/ceed-sycl-ref-basis.sycl.cpp
backends/sycl-ref/ceed-sycl-ref-qfunction-load.sycl.cpp
backends/sycl-ref/ceed-sycl-ref-qfunction.sycl.cpp
backends/sycl-ref/ceed-sycl-ref-qfunctioncontext.sycl.cpp
backends/sycl-ref/ceed-sycl-ref.sycl.cpp
backends/sycl-ref/ceed-sycl-vector.sycl.cpp
backends/sycl-shared/ceed-sycl-shared-basis.sycl.cpp
backends/sycl-shared/ceed-sycl-shared.sycl.cpp
include/ceed/jit-source/sycl/sycl-ref-qfunction.h
7bd8c1e130-Jun-2023 Jed Brown <jed@jedbrown.org>

Merge pull request #1243 from CEED/jed/fix-asan-bugs

Fix -fsanitize=address bugs


.github/workflows/c-fortran-test-linux-osx.yml
Makefile
backends/memcheck/ceed-memcheck-qfunction.c
tests/t568-operator.c
fb65186628-Jun-2023 Jed Brown <jed@jedbrown.org>

CI: upgrade actions to gcc-12 and enable address sanitizer


.github/workflows/c-fortran-test-linux-osx.yml
Makefile
62e4d60228-Jun-2023 Jed Brown <jed@jedbrown.org>

Merge pull request #1234 from CEED/jrwrigh/fluids_64int

fluids: Compatability for PETSc w/ 64bit ints


examples/fluids/navierstokes.c
examples/fluids/navierstokes.h
examples/fluids/problems/advection.c
examples/fluids/problems/advection2d.c
examples/fluids/problems/blasius.c
examples/fluids/problems/eulervortex.c
examples/fluids/problems/newtonian.c
examples/fluids/problems/sgs_dd_model.c
examples/fluids/problems/shocktube.c
examples/fluids/problems/stg_shur14.c
examples/fluids/src/differential_filter.c
examples/fluids/src/grid_anisotropy_tensor.c
examples/fluids/src/misc.c
examples/fluids/src/setupdm.c
examples/fluids/src/setuplibceed.c
examples/fluids/src/setupts.c
examples/fluids/src/turb_spanstats.c
examples/fluids/src/velocity_gradient_projection.c
8e6aa22628-Jun-2023 Jed Brown <jed@jedbrown.org>

Fix -fsanitize=address bugs

note: ‘snprintf’ output between 21 and 31 bytes into a destination of size 30

The assembly test had inconsistent ordering of arguments between the
qfunction itself and t

Fix -fsanitize=address bugs

note: ‘snprintf’ output between 21 and 31 bytes into a destination of size 30

The assembly test had inconsistent ordering of arguments between the
qfunction itself and the call to CeedQFunctionAddInput.

show more ...


backends/memcheck/ceed-memcheck-qfunction.c
tests/t568-operator.c
0de6a49f19-Jun-2023 James Wright <james@jameswright.xyz>

fluids: Use 32bit integer for file token

- Also code into the token whether PETSc was coded using 32 or 64 bit
integers


examples/fluids/navierstokes.h
examples/fluids/src/misc.c
examples/fluids/src/setupts.c
8213d10119-Jun-2023 James Wright <james@jameswright.xyz>

fluids: Remove problem->bc function pointers

- Not needed, as essential boundary conditions go through
`DMPlexInsertBoundaryValues_NS` or
`DMPlexInsertBoundaryValues_StrongBC`


examples/fluids/navierstokes.h
examples/fluids/problems/advection.c
examples/fluids/problems/advection2d.c
examples/fluids/problems/eulervortex.c
examples/fluids/problems/newtonian.c
examples/fluids/problems/shocktube.c
examples/fluids/src/setupdm.c
457e73b219-Jun-2023 James Wright <james@jameswright.xyz>

fluids: Compatability for PETSc w/ 64bit ints


examples/fluids/navierstokes.c
examples/fluids/navierstokes.h
examples/fluids/problems/blasius.c
examples/fluids/problems/sgs_dd_model.c
examples/fluids/problems/stg_shur14.c
examples/fluids/src/differential_filter.c
examples/fluids/src/grid_anisotropy_tensor.c
examples/fluids/src/misc.c
examples/fluids/src/setuplibceed.c
examples/fluids/src/setupts.c
examples/fluids/src/turb_spanstats.c
examples/fluids/src/velocity_gradient_projection.c
d1ca5d5e26-Jun-2023 James Wright <james@jameswright.xyz>

Merge pull request #1242 from CEED/jeremy/contract-destroy-cleanup

Remove unneeded guard in BasisDestroy


interface/ceed-basis.c
9831d45a23-Jun-2023 Jeremy L Thompson <jeremy@jeremylt.org>

minor - destroying null object is always safe


interface/ceed-basis.c
f2910f1122-Jun-2023 Jeremy L Thompson <jeremy@jeremylt.org>

Merge pull request #1240 from CEED/jeremy/small-typo

readme - fix typo


README.md
82b3672722-Jun-2023 Jeremy L Thompson <jeremy@jeremylt.org>

readme - fix typo


README.md
f95bab6c21-Jun-2023 Jeremy L Thompson <jeremy@jeremylt.org>

Merge pull request #1238 from CEED/jeremy/fix-return

Minor - add missing return statement


interface/ceed.c

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