History log of /petsc/config/BuildSystem/ (Results 2551 – 2575 of 4739)
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31cf479b04-Sep-2019 Barry Smith <bsmith@mcs.anl.gov>

When failure occurs running configure on external package save the results of config.log into the configure.log

Commit-type: configure debugging-aid

a9acdec722-Aug-2019 Barry Smith <bsmith@mcs.anl.gov>

Many fixes to get PETSc and --download-fblaslapack working with nagfor compiler

Works with --download-fblaslapack, --download-scalapack, --download-mpich (does not work with --download-mumps)

Uses

Many fixes to get PETSc and --download-fblaslapack working with nagfor compiler

Works with --download-fblaslapack, --download-scalapack, --download-mpich (does not work with --download-mumps)

Uses lib/petsc/bin/petscnagfor as wrapper compiler since nagfor cannot work natively with the PETSc/standard Unix build environment

Required fixes/modernizations for BLAS/LAPACK source code (updated in the branch used by this branch, need to make it a tag when done)

Found a couple of portability issues with PETSc mpif.h

When package build fails they will no longer dump all the (huge amount) build output to the screeen

Commit-type: portability-fix

show more ...

f24d37d405-Sep-2019 Satish Balay <balay@mcs.anl.gov>

Merge branch 'balay/with-cudac' into 'master'

cuda: add --with-cudac to help.

See merge request petsc/petsc!2007

cd6fc57205-Sep-2019 Satish Balay <balay@mcs.anl.gov>

Merge branch 'barry/2019-09-03/fix-checkcxxlibaries' into 'master'

Fix checkcxxlibraries to properly check -lstdc++ if -lc++ fails; also check...

See merge request petsc/petsc!2003

d442097522-Aug-2019 Satish Balay <balay@mcs.anl.gov>

cuda: add --with-cudac to help.

And fix API to use '--with-cudac=0' to disable cuda [and not 'with-cuda=0'].

Also the comparison "self.argDB['with-cuda'] == '0'" is buggy - as its a bool - not stri

cuda: add --with-cudac to help.

And fix API to use '--with-cudac=0' to disable cuda [and not 'with-cuda=0'].

Also the comparison "self.argDB['with-cuda'] == '0'" is buggy - as its a bool - not string.

So cudac => cuda-compiler. cuda => cuda-library.

Reported-by: "Schanen, Michel" <mschanen@anl.gov>

show more ...

660dac7e04-Sep-2019 Satish Balay <balay@mcs.anl.gov>

Merge branch 'jed/gitlab-ci'


/petsc/.gitlab-ci.yml
config/package.py
config/packages/ADIOS.py
config/packages/BlasLapack.py
config/packages/PTScotch.py
config/packages/PaStiX.py
config/packages/mpi4py.py
config/packages/petsc4py.py
config/packages/pthread.py
script.py
/petsc/config/PETSc/options/arch.py
/petsc/config/examples/arch-ci-freebsd-c-single-opt.py
/petsc/config/examples/arch-ci-freebsd-cxx-cmplx-64idx-dbg.py
/petsc/config/examples/arch-ci-freebsd-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-ci-freebsd-cxx-pkgs-opt.py
/petsc/config/examples/arch-ci-freebsd-pkgs-opt.py
/petsc/config/examples/arch-ci-linux-IPL64.py
/petsc/config/examples/arch-ci-linux-analyzer.py
/petsc/config/examples/arch-ci-linux-c-exodus-dbg.py
/petsc/config/examples/arch-ci-linux-clang-avx.py
/petsc/config/examples/arch-ci-linux-cmplx-gcov.py
/petsc/config/examples/arch-ci-linux-cmplx-single.py
/petsc/config/examples/arch-ci-linux-cuda-double.py
/petsc/config/examples/arch-ci-linux-cuda-single.py
/petsc/config/examples/arch-ci-linux-cxx-cmplx-pkgs-64idx.py
/petsc/config/examples/arch-ci-linux-gcc-complex-opt.py
/petsc/config/examples/arch-ci-linux-gcc-cxx-avx2.py
/petsc/config/examples/arch-ci-linux-gcc-ifc-cmplx.py
/petsc/config/examples/arch-ci-linux-gcc-pkgs-opt.py
/petsc/config/examples/arch-ci-linux-gcc-quad-64idx-dbg.py
/petsc/config/examples/arch-ci-linux-gcov.py
/petsc/config/examples/arch-ci-linux-knl.py
/petsc/config/examples/arch-ci-linux-matlab-ilp64-gcov.py
/petsc/config/examples/arch-ci-linux-opt-cxx-quad.py
/petsc/config/examples/arch-ci-linux-opt-misc.py
/petsc/config/examples/arch-ci-linux-pardiso.py
/petsc/config/examples/arch-ci-linux-pgi.py
/petsc/config/examples/arch-ci-linux-pkgs-64idx.py
/petsc/config/examples/arch-ci-linux-pkgs-cxx-mlib.py
/petsc/config/examples/arch-ci-linux-pkgs-dbg-ftn-interfaces.py
/petsc/config/examples/arch-ci-linux-pkgs-gcov.py
/petsc/config/examples/arch-ci-linux-pkgs-opt.py
/petsc/config/examples/arch-ci-linux-pkgs-valgrind.py
/petsc/config/examples/arch-ci-linux-viennacl.py
/petsc/config/examples/arch-ci-linux-without-fc.py
/petsc/config/examples/arch-ci-linux-xsdk-dbg.py
/petsc/config/examples/arch-ci-mswin-intel-cxx-cmplx.py
/petsc/config/examples/arch-ci-mswin-intel.py
/petsc/config/examples/arch-ci-mswin-opt-impi.py
/petsc/config/examples/arch-ci-mswin-uni.py
/petsc/config/examples/arch-ci-opensolaris-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-ci-opensolaris-misc.py
/petsc/config/examples/arch-ci-opensolaris-pkgs-opt.py
/petsc/config/examples/arch-ci-osx-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-ci-osx-cxx-pkgs-opt.py
/petsc/config/examples/arch-ci-osx-dbg.py
/petsc/config/examples/arch-ci-osx-prefix.py
/petsc/config/examples/arch-ci-osx-xsdk-opt.py
/petsc/config/examples/tmp/arch-c-exodus-dbg-builder.csh
/petsc/config/examples/tmp/arch-ci-mswin-cxx-complex-dbg.py
/petsc/config/examples/tmp/arch-ci-mswin-double-opt.py
/petsc/config/examples/tmp/arch-ci-osx-cxx-pkgs-opt.py
/petsc/config/examples/tmp/arch-cuda-double.csh
/petsc/config/examples/tmp/arch-cuda-single.csh
/petsc/config/examples/tmp/arch-freebsd-cxx-pkgs-opt.csh
/petsc/config/examples/tmp/arch-linux-c89.py
/petsc/config/examples/tmp/arch-linux-cmplx-gcov.csh
/petsc/config/examples/tmp/arch-linux-dbg-quad.py
/petsc/config/examples/tmp/arch-linux-pkgs-cxx-mlib.csh
/petsc/config/examples/tmp/arch-linux-pkgs-opt.csh
/petsc/config/examples/tmp/arch-linux-uni.py
/petsc/config/examples/tmp/arch-mswin-gnu.py
/petsc/config/examples/tmp/arch-opensolaris-cmplx-pkgs-dbg.py
/petsc/config/examples/tmp/arch-osx-10.6-cxx-pkgs-opt.csh
/petsc/config/examples/tmp/arch-osx-pgi-pkgs-opt.py
/petsc/config/gmakegentest.py
/petsc/config/petsc_harness.sh
/petsc/gmakefile.test
/petsc/include/petsc/private/kspimpl.h
/petsc/include/petscis.h
/petsc/lib/petsc/bin/maint/petsc-val.supp
/petsc/lib/petsc/conf/test.common
/petsc/src/dm/impls/plex/examples/tests/ex36.c
/petsc/src/dm/label/dmlabel.c
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/ksp/ksp/examples/tutorials/ex100f.F90
/petsc/src/ksp/ksp/interface/dlregisksp.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/pc/impls/tfs/gs.c
/petsc/src/ksp/pc/impls/tfs/tfs.h
/petsc/src/ksp/pc/impls/tfs/xxt.c
/petsc/src/ksp/pc/impls/tfs/xyt.c
/petsc/src/mat/examples/tests/ex32.c
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/snes/examples/tutorials/ex19.c
/petsc/src/snes/examples/tutorials/output/ex48_4.out
/petsc/src/snes/examples/tutorials/output/ex5_3_alt.out
/petsc/src/sys/error/examples/tests/ex2.c
/petsc/src/sys/examples/tests/ex1.c
/petsc/src/sys/examples/tests/ex2.c
/petsc/src/sys/examples/tests/ex3.c
/petsc/src/sys/examples/tests/ex32.c
/petsc/src/sys/examples/tutorials/ex19.c
/petsc/src/sys/examples/tutorials/ex5.c
/petsc/src/sys/python/pythonsys.c
/petsc/src/tao/bound/impls/bnk/bnk.c
/petsc/src/tao/leastsquares/examples/tutorials/chwirut2.c
/petsc/src/tao/leastsquares/examples/tutorials/output/chwirut2_1_alt_5.out
/petsc/src/tao/unconstrained/impls/nls/nls.c
/petsc/src/tao/unconstrained/impls/ntl/ntl.c
/petsc/src/tao/unconstrained/impls/ntr/ntr.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex5adj.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex5opt_ic.c
/petsc/src/ts/examples/tutorials/ex16.c
/petsc/src/ts/examples/tutorials/ex20.c
/petsc/src/ts/examples/tutorials/ex20adj.c
/petsc/src/ts/examples/tutorials/ex20opt_ic.c
/petsc/src/ts/examples/tutorials/ex20opt_p.c
/petsc/src/ts/examples/tutorials/multirate/output/ex6_1_alt.out
/petsc/src/ts/examples/tutorials/multirate/output/ex7_1_alt.out
/petsc/src/ts/examples/tutorials/multirate/output/ex7_3_alt.out
/petsc/src/ts/examples/tutorials/optimal_control/ex1.c
/petsc/src/ts/examples/tutorials/output/ex31_4_alt_2.out
/petsc/src/ts/examples/tutorials/power_grid/ex9adj.c
/petsc/src/ts/examples/tutorials/power_grid/ex9opt.c
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/interface/sensitivity/tssen.c
/petsc/src/vec/is/is/examples/tests/ex10.c
/petsc/src/vec/is/is/examples/tests/output/ex10_1_start--2_end-2.out
/petsc/src/vec/is/is/examples/tests/output/ex10_1_start--2_end-6.out
/petsc/src/vec/is/is/examples/tests/output/ex10_1_start-4_end-2.out
/petsc/src/vec/is/is/examples/tests/output/ex10_1_start-4_end-6.out
/petsc/src/vec/is/is/impls/general/general.c
e71ddac903-Sep-2019 Barry Smith <bsmith@mcs.anl.gov>

Fix checkcxxlibraries to properly check -lstdc++ if -lc++ fails; also check for -lc++ with FC link issues

Commit-type: bug-fix, portability-fix
Reported-by: Brad Aagaard <baagaard@usgs.gov>

8ceee6fd03-Sep-2019 Satish Balay <balay@mcs.anl.gov>

Merge remote-tracking branch 'origin/maint'

dd439c7403-Sep-2019 Satish Balay <balay@mcs.anl.gov>

Merge branch 'knepley/fix-configure-ml' into 'master'

Configure: Fix ML test link

See merge request petsc/petsc!1980

95512e6627-Aug-2019 Satish Balay <balay@mcs.anl.gov>

pastix: upstream tarball has a .git clone in a subdir - so remove it [to make it 'git clean' safe for ci tests]


/petsc/.gitlab-ci.yml
config/packages/PaStiX.py
/petsc/config/examples/arch-ci-freebsd-c-single-opt.py
/petsc/config/examples/arch-ci-freebsd-cxx-cmplx-64idx-dbg.py
/petsc/config/examples/arch-ci-freebsd-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-ci-freebsd-cxx-pkgs-opt.py
/petsc/config/examples/arch-ci-freebsd-pkgs-opt.py
/petsc/config/examples/arch-ci-linux-IPL64.py
/petsc/config/examples/arch-ci-linux-analyzer.py
/petsc/config/examples/arch-ci-linux-c-exodus-dbg.py
/petsc/config/examples/arch-ci-linux-clang-avx.py
/petsc/config/examples/arch-ci-linux-cmplx-gcov.py
/petsc/config/examples/arch-ci-linux-cmplx-single.py
/petsc/config/examples/arch-ci-linux-cuda-double.py
/petsc/config/examples/arch-ci-linux-cuda-single.py
/petsc/config/examples/arch-ci-linux-cxx-cmplx-pkgs-64idx.py
/petsc/config/examples/arch-ci-linux-gcc-complex-opt.py
/petsc/config/examples/arch-ci-linux-gcc-cxx-avx2.py
/petsc/config/examples/arch-ci-linux-gcc-ifc-cmplx.py
/petsc/config/examples/arch-ci-linux-gcc-pkgs-opt.py
/petsc/config/examples/arch-ci-linux-gcc-quad-64idx-dbg.py
/petsc/config/examples/arch-ci-linux-gcov.py
/petsc/config/examples/arch-ci-linux-knl.py
/petsc/config/examples/arch-ci-linux-matlab-ilp64-gcov.py
/petsc/config/examples/arch-ci-linux-opt-cxx-quad.py
/petsc/config/examples/arch-ci-linux-opt-misc.py
/petsc/config/examples/arch-ci-linux-pardiso.py
/petsc/config/examples/arch-ci-linux-pgi.py
/petsc/config/examples/arch-ci-linux-pkgs-64idx.py
/petsc/config/examples/arch-ci-linux-pkgs-cxx-mlib.py
/petsc/config/examples/arch-ci-linux-pkgs-dbg-ftn-interfaces.py
/petsc/config/examples/arch-ci-linux-pkgs-gcov.py
/petsc/config/examples/arch-ci-linux-pkgs-opt.py
/petsc/config/examples/arch-ci-linux-pkgs-valgrind.py
/petsc/config/examples/arch-ci-linux-viennacl.py
/petsc/config/examples/arch-ci-linux-without-fc.py
/petsc/config/examples/arch-ci-linux-xsdk-dbg.py
/petsc/config/examples/arch-ci-mswin-intel-cxx-cmplx.py
/petsc/config/examples/arch-ci-mswin-intel.py
/petsc/config/examples/arch-ci-mswin-opt-impi.py
/petsc/config/examples/arch-ci-mswin-uni.py
/petsc/config/examples/arch-ci-opensolaris-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-ci-opensolaris-misc.py
/petsc/config/examples/arch-ci-opensolaris-pkgs-opt.py
/petsc/config/examples/arch-ci-osx-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-ci-osx-cxx-pkgs-opt.py
/petsc/config/examples/arch-ci-osx-dbg.py
/petsc/config/examples/arch-ci-osx-prefix.py
/petsc/config/examples/arch-ci-osx-xsdk-opt.py
/petsc/config/examples/tmp/arch-c-exodus-dbg-builder.csh
/petsc/config/examples/tmp/arch-ci-mswin-cxx-complex-dbg.py
/petsc/config/examples/tmp/arch-ci-mswin-double-opt.py
/petsc/config/examples/tmp/arch-ci-osx-cxx-pkgs-opt.py
/petsc/config/examples/tmp/arch-cuda-double.csh
/petsc/config/examples/tmp/arch-cuda-single.csh
/petsc/config/examples/tmp/arch-freebsd-cxx-pkgs-opt.csh
/petsc/config/examples/tmp/arch-linux-c89.py
/petsc/config/examples/tmp/arch-linux-cmplx-gcov.csh
/petsc/config/examples/tmp/arch-linux-dbg-quad.py
/petsc/config/examples/tmp/arch-linux-pkgs-cxx-mlib.csh
/petsc/config/examples/tmp/arch-linux-pkgs-opt.csh
/petsc/config/examples/tmp/arch-linux-uni.py
/petsc/config/examples/tmp/arch-mswin-gnu.py
/petsc/config/examples/tmp/arch-opensolaris-cmplx-pkgs-dbg.py
/petsc/config/examples/tmp/arch-osx-10.6-cxx-pkgs-opt.csh
/petsc/config/examples/tmp/arch-osx-pgi-pkgs-opt.py
/petsc/config/petsc_harness.sh
/petsc/gmakefile.test
/petsc/lib/petsc/conf/test.common
/petsc/src/ksp/ksp/examples/tutorials/ex100f.F90
/petsc/src/sys/examples/tests/ex1.c
/petsc/src/sys/examples/tests/ex2.c
/petsc/src/sys/examples/tests/ex3.c
/petsc/src/sys/examples/tests/ex32.c
/petsc/src/sys/examples/tutorials/ex19.c
/petsc/src/ts/examples/tutorials/output/ex31_4_alt_2.out
7f0ff1af28-Aug-2019 Barry Smith <bsmith@mcs.anl.gov>

Reverted to changes from Commit 2475b7ca HAVE_C99 flag and HAVE_PACKAGE when package is not used by PETSc

Commit-type: feature, reversion-of-code-that-should-not-have-been-removed
Reported-by: Jed

Reverted to changes from Commit 2475b7ca HAVE_C99 flag and HAVE_PACKAGE when package is not used by PETSc

Commit-type: feature, reversion-of-code-that-should-not-have-been-removed
Reported-by: Jed Brown <jed@jedbrown.org>
Reported-by: tabrezali@gmail.com

show more ...


/petsc/CONTRIBUTING
/petsc/README.md
config/compilers.py
/petsc/config/PETSc/Configure.py
/petsc/lib/petsc/bin/maint/checkBuilds.py
/petsc/lib/petsc/bin/maint/confignightly/default
/petsc/lib/petsc/bin/petsc-performance-view
/petsc/lib/petsc/bin/petscnagupgrade.py
/petsc/setup.py
/petsc/src/docs/website/developers/index.html
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/documentation/license.html
/petsc/src/docs/website/download/index.html
/petsc/src/mat/examples/tests/ex235.c
/petsc/src/mat/examples/tests/output/ex230_1.out
/petsc/src/mat/examples/tests/output/ex235_1.out
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/mffd/mffdimpl.h
/petsc/src/mat/impls/shell/shell.c
/petsc/src/snes/examples/tests/ex69.c
/petsc/src/snes/examples/tests/ex7.c
/petsc/src/snes/examples/tests/output/ex7_3.out
/petsc/src/snes/examples/tests/output/ex7_3_alt.out
/petsc/src/snes/examples/tests/output/ex7_4.out
/petsc/src/snes/examples/tests/output/ex7_4_alt.out
/petsc/src/snes/examples/tutorials/ex15.c
/petsc/src/snes/examples/tutorials/ex17.c
/petsc/src/snes/examples/tutorials/ex21.c
/petsc/src/snes/examples/tutorials/ex5f.F90
/petsc/src/snes/examples/tutorials/ex5f90.F90
/petsc/src/snes/examples/tutorials/ex5f90t.F90
/petsc/src/snes/examples/tutorials/output/ex17_2d_p1_axial_elas.out
/petsc/src/snes/examples/tutorials/output/ex17_2d_p2_axial_elas.out
/petsc/src/snes/examples/tutorials/output/ex17_2d_p3_axial_elas.out
/petsc/src/snes/examples/tutorials/output/ex17_2d_q1_axial_elas.out
/petsc/src/snes/examples/tutorials/output/ex17_2d_q2_axial_elas.out
/petsc/src/snes/examples/tutorials/output/ex17_2d_q3_axial_elas.out
/petsc/src/snes/examples/tutorials/output/ex19_10.out
/petsc/src/snes/examples/tutorials/output/ex19_13.out
/petsc/src/snes/examples/tutorials/output/ex19_6.out
/petsc/src/snes/examples/tutorials/output/ex19_7.out
/petsc/src/snes/examples/tutorials/output/ex19_8.out
/petsc/src/snes/examples/tutorials/output/ex19_9.out
/petsc/src/snes/examples/tutorials/output/ex19_bcgsl.out
/petsc/src/snes/examples/tutorials/output/ex19_ibcgs.out
/petsc/src/snes/examples/tutorials/output/ex19_kaczmarz.out
/petsc/src/snes/examples/tutorials/output/ex19_mpibaijmkl.out
/petsc/src/snes/examples/tutorials/output/ex19_ngmres_fas_ms.out
/petsc/src/snes/examples/tutorials/output/ex19_ngs.out
/petsc/src/snes/examples/tutorials/output/ex19_ngs_fd.out
/petsc/src/snes/examples/tutorials/output/ex19_parms.out
/petsc/src/snes/examples/tutorials/output/ex19_parms_alt.out
/petsc/src/snes/examples/tutorials/output/ex19_parms_alt_2.out
/petsc/src/snes/examples/tutorials/output/ex19_seqbaijmkl.out
/petsc/src/snes/examples/tutorials/output/ex19_tut_1.out
/petsc/src/snes/examples/tutorials/output/ex19_tut_2.out
/petsc/src/snes/examples/tutorials/output/ex19_tut_3.out
/petsc/src/snes/examples/tutorials/output/ex19_tut_3_alt.out
/petsc/src/snes/examples/tutorials/output/ex19_tut_8.out
/petsc/src/snes/examples/tutorials/output/ex19_tut_8_alt.out
/petsc/src/snes/examples/tutorials/output/ex19_umfpack.out
/petsc/src/snes/examples/tutorials/output/ex40f90_1.out
/petsc/src/snes/examples/tutorials/output/ex46_1.out
/petsc/src/snes/examples/tutorials/output/ex46_1_alt.out
/petsc/src/snes/examples/tutorials/output/ex5_1.out
/petsc/src/snes/examples/tutorials/output/ex5_2.out
/petsc/src/snes/examples/tutorials/output/ex5_2_alt.out
/petsc/src/snes/examples/tutorials/output/ex5_3.out
/petsc/src/snes/examples/tutorials/output/ex5_4.out
/petsc/src/snes/examples/tutorials/output/ex5_4_alt.out
/petsc/src/snes/examples/tutorials/output/ex5_5_aspin.out
/petsc/src/snes/examples/tutorials/output/ex5_asm_0.out
/petsc/src/snes/examples/tutorials/output/ex5_asm_1.out
/petsc/src/snes/examples/tutorials/output/ex5_asm_2.out
/petsc/src/snes/examples/tutorials/output/ex5_asm_3.out
/petsc/src/snes/examples/tutorials/output/ex5_asm_4.out
/petsc/src/snes/examples/tutorials/output/ex5_asm_5.out
/petsc/src/snes/examples/tutorials/output/ex5_asm_5_alt.out
/petsc/src/snes/examples/tutorials/output/ex5_msm_0.out
/petsc/src/snes/examples/tutorials/output/ex5_msm_1.out
/petsc/src/snes/examples/tutorials/output/ex5_msm_2.out
/petsc/src/snes/examples/tutorials/output/ex5_msm_3.out
/petsc/src/snes/examples/tutorials/output/ex5_msm_4.out
/petsc/src/snes/examples/tutorials/output/ex5_msm_5.out
/petsc/src/snes/examples/tutorials/output/ex5_msm_5_alt.out
/petsc/src/snes/interface/snes.c
/petsc/src/snes/mf/snesmfj.c
/petsc/src/ts/examples/tutorials/ex26.c
/petsc/src/ts/examples/tutorials/ex7.c
/petsc/src/ts/examples/tutorials/power_grid/ex7.c
58c0e50726-Aug-2019 Satish Balay <balay@mcs.anl.gov>

fix petsc4py for --package-prefix-hash

And Packages installed after PETSc (like petsc4py) should not go in package-prefix-hash

3bdb793a20-Aug-2019 Barry Smith <bsmith@mcs.anl.gov>

Remove '-std=c89 -predantic' flags since we don't want to build external packages with them. They are just for testing PETSc

Commit-type: portability-fix
Reported-by: gitlab CI

also disable -predan

Remove '-std=c89 -predantic' flags since we don't want to build external packages with them. They are just for testing PETSc

Commit-type: portability-fix
Reported-by: gitlab CI

also disable -predantic

show more ...

a952ef1304-Aug-2019 Barry Smith <bsmith@mcs.anl.gov>

Add use of --package-prefix-hash for testing

Commit-type: testing

adios: fix pthread dependency

PTScotch: correctly list zlib, pthread as optional dependencies [and not hard-code the libraries her

Add use of --package-prefix-hash for testing

Commit-type: testing

adios: fix pthread dependency

PTScotch: correctly list zlib, pthread as optional dependencies [and not hard-code the libraries here]

configure hash: sort the hash of config files - this way its independent of the order of files listed by 'os.walk'

BlasLapack should use self.blaslapack.directory instead of self.libDir since this will be correct with -package-prefix-hash

Correctly handle saving hashvalue to prefix directory when --force is used

Packages that are built after PETSc configure finishes, postProcess() should never go in hash prefix location; just get rebuilt each time

Commit-type: bug-fix
Reported-by: Satish Balay <balay@mcs.anl.gov>

Need to encode hash information before passing to hash library in python3

Commit-type: portability-fix
Reported-by: gitlab CI

show more ...


/petsc/CONTRIBUTING
/petsc/README.md
config/package.py
config/packages/ADIOS.py
config/packages/BlasLapack.py
config/packages/PTScotch.py
config/packages/pthread.py
script.py
/petsc/config/PETSc/options/arch.py
/petsc/config/examples/arch-linux-pkgs-cxx-mlib.py
/petsc/lib/petsc/bin/maint/checkBuilds.py
/petsc/lib/petsc/bin/maint/confignightly/default
/petsc/lib/petsc/bin/petsc-performance-view
/petsc/lib/petsc/bin/petscnagupgrade.py
/petsc/setup.py
/petsc/src/docs/website/developers/index.html
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/documentation/license.html
/petsc/src/docs/website/download/index.html
/petsc/src/mat/examples/tests/ex235.c
/petsc/src/mat/examples/tests/output/ex230_1.out
/petsc/src/mat/examples/tests/output/ex235_1.out
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/mffd/mffdimpl.h
/petsc/src/mat/impls/shell/shell.c
/petsc/src/snes/examples/tests/ex69.c
/petsc/src/snes/examples/tests/ex7.c
/petsc/src/snes/examples/tests/output/ex7_3.out
/petsc/src/snes/examples/tests/output/ex7_3_alt.out
/petsc/src/snes/examples/tests/output/ex7_4.out
/petsc/src/snes/examples/tests/output/ex7_4_alt.out
/petsc/src/snes/examples/tutorials/ex15.c
/petsc/src/snes/examples/tutorials/ex17.c
/petsc/src/snes/examples/tutorials/ex21.c
/petsc/src/snes/examples/tutorials/ex5f.F90
/petsc/src/snes/examples/tutorials/ex5f90.F90
/petsc/src/snes/examples/tutorials/ex5f90t.F90
/petsc/src/snes/examples/tutorials/output/ex17_2d_p1_axial_elas.out
/petsc/src/snes/examples/tutorials/output/ex17_2d_p2_axial_elas.out
/petsc/src/snes/examples/tutorials/output/ex17_2d_p3_axial_elas.out
/petsc/src/snes/examples/tutorials/output/ex17_2d_q1_axial_elas.out
/petsc/src/snes/examples/tutorials/output/ex17_2d_q2_axial_elas.out
/petsc/src/snes/examples/tutorials/output/ex17_2d_q3_axial_elas.out
/petsc/src/snes/examples/tutorials/output/ex19_10.out
/petsc/src/snes/examples/tutorials/output/ex19_13.out
/petsc/src/snes/examples/tutorials/output/ex19_6.out
/petsc/src/snes/examples/tutorials/output/ex19_7.out
/petsc/src/snes/examples/tutorials/output/ex19_8.out
/petsc/src/snes/examples/tutorials/output/ex19_9.out
/petsc/src/snes/examples/tutorials/output/ex19_bcgsl.out
/petsc/src/snes/examples/tutorials/output/ex19_ibcgs.out
/petsc/src/snes/examples/tutorials/output/ex19_kaczmarz.out
/petsc/src/snes/examples/tutorials/output/ex19_mpibaijmkl.out
/petsc/src/snes/examples/tutorials/output/ex19_ngmres_fas_ms.out
/petsc/src/snes/examples/tutorials/output/ex19_ngs.out
/petsc/src/snes/examples/tutorials/output/ex19_ngs_fd.out
/petsc/src/snes/examples/tutorials/output/ex19_parms.out
/petsc/src/snes/examples/tutorials/output/ex19_parms_alt.out
/petsc/src/snes/examples/tutorials/output/ex19_parms_alt_2.out
/petsc/src/snes/examples/tutorials/output/ex19_seqbaijmkl.out
/petsc/src/snes/examples/tutorials/output/ex19_tut_1.out
/petsc/src/snes/examples/tutorials/output/ex19_tut_2.out
/petsc/src/snes/examples/tutorials/output/ex19_tut_3.out
/petsc/src/snes/examples/tutorials/output/ex19_tut_3_alt.out
/petsc/src/snes/examples/tutorials/output/ex19_tut_8.out
/petsc/src/snes/examples/tutorials/output/ex19_tut_8_alt.out
/petsc/src/snes/examples/tutorials/output/ex19_umfpack.out
/petsc/src/snes/examples/tutorials/output/ex40f90_1.out
/petsc/src/snes/examples/tutorials/output/ex46_1.out
/petsc/src/snes/examples/tutorials/output/ex46_1_alt.out
/petsc/src/snes/examples/tutorials/output/ex5_1.out
/petsc/src/snes/examples/tutorials/output/ex5_2.out
/petsc/src/snes/examples/tutorials/output/ex5_2_alt.out
/petsc/src/snes/examples/tutorials/output/ex5_3.out
/petsc/src/snes/examples/tutorials/output/ex5_4.out
/petsc/src/snes/examples/tutorials/output/ex5_4_alt.out
/petsc/src/snes/examples/tutorials/output/ex5_5_aspin.out
/petsc/src/snes/examples/tutorials/output/ex5_asm_0.out
/petsc/src/snes/examples/tutorials/output/ex5_asm_1.out
/petsc/src/snes/examples/tutorials/output/ex5_asm_2.out
/petsc/src/snes/examples/tutorials/output/ex5_asm_3.out
/petsc/src/snes/examples/tutorials/output/ex5_asm_4.out
/petsc/src/snes/examples/tutorials/output/ex5_asm_5.out
/petsc/src/snes/examples/tutorials/output/ex5_asm_5_alt.out
/petsc/src/snes/examples/tutorials/output/ex5_msm_0.out
/petsc/src/snes/examples/tutorials/output/ex5_msm_1.out
/petsc/src/snes/examples/tutorials/output/ex5_msm_2.out
/petsc/src/snes/examples/tutorials/output/ex5_msm_3.out
/petsc/src/snes/examples/tutorials/output/ex5_msm_4.out
/petsc/src/snes/examples/tutorials/output/ex5_msm_5.out
/petsc/src/snes/examples/tutorials/output/ex5_msm_5_alt.out
/petsc/src/snes/interface/snes.c
/petsc/src/snes/mf/snesmfj.c
/petsc/src/ts/examples/tutorials/ex26.c
/petsc/src/ts/examples/tutorials/ex7.c
/petsc/src/ts/examples/tutorials/power_grid/ex7.c
8f767eab26-Aug-2019 Hong Zhang <hongzhang@anl.gov>

Update revolve.py

C compiler was picked to compile the CXX file in Revolve. Changing setCompilers to framework solves this problem.

f783774b22-Aug-2019 Barry Smith <bsmith@mcs.anl.gov>

Confirmed Matt's MR change and removed old-fashion code that checked manually for CXX while configuring

f09ea17e22-Aug-2019 Matthew Knepley <knepley@gmail.com>

Configure: Fix ML test link
- At least on my Mac, this was necessary to link ML


config/packages/ml.py
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/mat/examples/tests/ex235.c
/petsc/src/mat/examples/tests/output/ex230_1.out
/petsc/src/mat/examples/tests/output/ex235_1.out
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/mffd/mffdimpl.h
/petsc/src/mat/impls/shell/shell.c
/petsc/src/snes/examples/tests/ex69.c
/petsc/src/snes/examples/tests/ex7.c
/petsc/src/snes/examples/tests/output/ex7_3.out
/petsc/src/snes/examples/tests/output/ex7_3_alt.out
/petsc/src/snes/examples/tests/output/ex7_4.out
/petsc/src/snes/examples/tests/output/ex7_4_alt.out
/petsc/src/snes/examples/tutorials/ex15.c
/petsc/src/snes/examples/tutorials/ex17.c
/petsc/src/snes/examples/tutorials/ex21.c
/petsc/src/snes/examples/tutorials/ex5f.F90
/petsc/src/snes/examples/tutorials/ex5f90.F90
/petsc/src/snes/examples/tutorials/ex5f90t.F90
/petsc/src/snes/examples/tutorials/output/ex17_2d_p1_axial_elas.out
/petsc/src/snes/examples/tutorials/output/ex17_2d_p2_axial_elas.out
/petsc/src/snes/examples/tutorials/output/ex17_2d_p3_axial_elas.out
/petsc/src/snes/examples/tutorials/output/ex17_2d_q1_axial_elas.out
/petsc/src/snes/examples/tutorials/output/ex17_2d_q2_axial_elas.out
/petsc/src/snes/examples/tutorials/output/ex17_2d_q3_axial_elas.out
/petsc/src/snes/examples/tutorials/output/ex19_10.out
/petsc/src/snes/examples/tutorials/output/ex19_13.out
/petsc/src/snes/examples/tutorials/output/ex19_6.out
/petsc/src/snes/examples/tutorials/output/ex19_7.out
/petsc/src/snes/examples/tutorials/output/ex19_8.out
/petsc/src/snes/examples/tutorials/output/ex19_9.out
/petsc/src/snes/examples/tutorials/output/ex19_bcgsl.out
/petsc/src/snes/examples/tutorials/output/ex19_ibcgs.out
/petsc/src/snes/examples/tutorials/output/ex19_kaczmarz.out
/petsc/src/snes/examples/tutorials/output/ex19_mpibaijmkl.out
/petsc/src/snes/examples/tutorials/output/ex19_ngmres_fas_ms.out
/petsc/src/snes/examples/tutorials/output/ex19_ngs.out
/petsc/src/snes/examples/tutorials/output/ex19_ngs_fd.out
/petsc/src/snes/examples/tutorials/output/ex19_parms.out
/petsc/src/snes/examples/tutorials/output/ex19_parms_alt.out
/petsc/src/snes/examples/tutorials/output/ex19_parms_alt_2.out
/petsc/src/snes/examples/tutorials/output/ex19_seqbaijmkl.out
/petsc/src/snes/examples/tutorials/output/ex19_tut_1.out
/petsc/src/snes/examples/tutorials/output/ex19_tut_2.out
/petsc/src/snes/examples/tutorials/output/ex19_tut_3.out
/petsc/src/snes/examples/tutorials/output/ex19_tut_3_alt.out
/petsc/src/snes/examples/tutorials/output/ex19_tut_8.out
/petsc/src/snes/examples/tutorials/output/ex19_tut_8_alt.out
/petsc/src/snes/examples/tutorials/output/ex19_umfpack.out
/petsc/src/snes/examples/tutorials/output/ex40f90_1.out
/petsc/src/snes/examples/tutorials/output/ex46_1.out
/petsc/src/snes/examples/tutorials/output/ex46_1_alt.out
/petsc/src/snes/examples/tutorials/output/ex5_1.out
/petsc/src/snes/examples/tutorials/output/ex5_2.out
/petsc/src/snes/examples/tutorials/output/ex5_2_alt.out
/petsc/src/snes/examples/tutorials/output/ex5_3.out
/petsc/src/snes/examples/tutorials/output/ex5_4.out
/petsc/src/snes/examples/tutorials/output/ex5_4_alt.out
/petsc/src/snes/examples/tutorials/output/ex5_5_aspin.out
/petsc/src/snes/examples/tutorials/output/ex5_asm_0.out
/petsc/src/snes/examples/tutorials/output/ex5_asm_1.out
/petsc/src/snes/examples/tutorials/output/ex5_asm_2.out
/petsc/src/snes/examples/tutorials/output/ex5_asm_3.out
/petsc/src/snes/examples/tutorials/output/ex5_asm_4.out
/petsc/src/snes/examples/tutorials/output/ex5_asm_5.out
/petsc/src/snes/examples/tutorials/output/ex5_asm_5_alt.out
/petsc/src/snes/examples/tutorials/output/ex5_msm_0.out
/petsc/src/snes/examples/tutorials/output/ex5_msm_1.out
/petsc/src/snes/examples/tutorials/output/ex5_msm_2.out
/petsc/src/snes/examples/tutorials/output/ex5_msm_3.out
/petsc/src/snes/examples/tutorials/output/ex5_msm_4.out
/petsc/src/snes/examples/tutorials/output/ex5_msm_5.out
/petsc/src/snes/examples/tutorials/output/ex5_msm_5_alt.out
/petsc/src/snes/interface/snes.c
/petsc/src/snes/mf/snesmfj.c
/petsc/src/ts/examples/tutorials/ex26.c
/petsc/src/ts/examples/tutorials/ex7.c
/petsc/src/ts/examples/tutorials/power_grid/ex7.c
a5e7a95c18-Aug-2019 Karl Rupp <me@karlrupp.net>

Merge branch 'barry/2019-08-17/improve-openmp-handling' [PR #1972]

* barry/2019-08-17/improve-openmp-handling:
Check OpenMP flags separatedly for C, C++, FC, check the option actually works, error i

Merge branch 'barry/2019-08-17/improve-openmp-handling' [PR #1972]

* barry/2019-08-17/improve-openmp-handling:
Check OpenMP flags separatedly for C, C++, FC, check the option actually works, error if any don't work. Mumps uses OpenMP.

show more ...

4760e3ec18-Aug-2019 Karl Rupp <me@karlrupp.net>

Merge branch 'barry/2019-09-01/robustify-version-check' [PR #1963]

2bd8934b17-Aug-2019 Barry Smith <bsmith@mcs.anl.gov>

Check OpenMP flags separatedly for C, C++, FC, check the option actually works, error if any don't work. Mumps uses OpenMP

Commit-type: portability-fix, feature

f3ae25fa02-Aug-2019 Barry Smith <bsmith@mcs.anl.gov>

When detecting version info handle blanks introducted by preprocessor, error if needed version cannot be detected for packages that PETSc requires version information

Commit-type: bug-fix, porta

When detecting version info handle blanks introducted by preprocessor, error if needed version cannot be detected for packages that PETSc requires version information

Commit-type: bug-fix, portability-fix
Reported-by: Mark Adams <mfadams@lbl.gov>

show more ...


config/base.py
config/package.py
config/packages/cuda.py
config/packages/hypre.py
/petsc/include/petscsys.h
/petsc/share/petsc/datafiles/meshes/hybrid_hexwedge.exo
/petsc/share/petsc/datafiles/meshes/hybrid_hexwedge.msh
/petsc/src/benchmarks/benchmarkExample.py
/petsc/src/dm/impls/plex/examples/tests/ex1.c
/petsc/src/dm/impls/plex/examples/tests/ex18.c
/petsc/src/dm/impls/plex/examples/tests/output/ex18_1_quad_dist1_interpolate-none.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_1_quad_dist1_interpolate-parallel.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_1_tri_dist1_interpolate-none.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_1_tri_dist1_interpolate-parallel.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_2c.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_4_hex_dist1_interpolate-none.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_4_hex_dist1_interpolate-parallel.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_4_tet_dist1_interpolate-none.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_4_tet_dist1_interpolate-parallel.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_exodus_17_hyb3d_interp_ascii.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_gmsh_17_hyb3d_ascii.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_gmsh_17_hyb3d_interp_ascii.out
/petsc/src/dm/impls/plex/ftn-custom/makefile
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexexodusii.c
/petsc/src/dm/impls/plex/plexgmsh.c
/petsc/src/dm/impls/plex/plexinterpolate.c
/petsc/src/ksp/ksp/examples/tutorials/output/ex74_1_alt_4.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex74_3_alt_3.out
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/impls/sell/seq/sell.c
/petsc/src/sys/examples/tests/ex49f.F90
/petsc/src/sys/examples/tests/makefile
/petsc/src/sys/examples/tests/output/ex49f_1.out
/petsc/src/sys/utils/sorti.c
/petsc/src/tao/linesearch/impls/morethuente/morethuente.c
8e42635015-Aug-2019 Satish Balay <balay@mcs.anl.gov>

pnetcdf: update download URL


config/packages/pnetcdf.py
/petsc/include/petscdm.h
/petsc/src/dm/examples/tutorials/ex20.c
/petsc/src/dm/examples/tutorials/ex21.c
/petsc/src/dm/field/impls/ds/dmfieldds.c
/petsc/src/dm/impls/forest/examples/tests/ex2.c
/petsc/src/dm/impls/forest/p4est/pforest.c
/petsc/src/dm/impls/network/network.c
/petsc/src/dm/impls/plex/examples/tests/ex10.c
/petsc/src/dm/impls/plex/examples/tests/ex11.c
/petsc/src/dm/impls/plex/examples/tests/ex15.c
/petsc/src/dm/impls/plex/examples/tests/ex19.c
/petsc/src/dm/impls/plex/examples/tests/ex26.c
/petsc/src/dm/impls/plex/examples/tests/ex27.c
/petsc/src/dm/impls/plex/examples/tests/ex3.c
/petsc/src/dm/impls/plex/examples/tests/ex36.c
/petsc/src/dm/impls/plex/examples/tests/ex9.c
/petsc/src/dm/impls/plex/examples/tutorials/ex1.c
/petsc/src/dm/impls/plex/examples/tutorials/ex1f90.F90
/petsc/src/dm/impls/plex/examples/tutorials/ex6.c
/petsc/src/dm/impls/plex/examples/tutorials/ex7.c
/petsc/src/dm/impls/plex/examples/tutorials/ex8.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexadapt.c
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/plex/plexdistribute.c
/petsc/src/dm/impls/plex/plexfem.c
/petsc/src/dm/impls/plex/plexgeometry.c
/petsc/src/dm/impls/plex/plexglvis.c
/petsc/src/dm/impls/plex/plexhdf5.c
/petsc/src/dm/impls/plex/plexindices.c
/petsc/src/dm/impls/plex/plexnatural.c
/petsc/src/dm/impls/plex/plexpartition.c
/petsc/src/dm/impls/plex/plexpoint.c
/petsc/src/dm/impls/plex/plexpreallocate.c
/petsc/src/dm/impls/plex/plexproject.c
/petsc/src/dm/impls/plex/plexreorder.c
/petsc/src/dm/impls/plex/plexsection.c
/petsc/src/dm/impls/plex/plextree.c
/petsc/src/dm/impls/plex/plexvtk.c
/petsc/src/dm/impls/swarm/examples/tests/ex2.c
/petsc/src/dm/impls/swarm/swarm.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmi.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/documentation/changes/38.html
/petsc/src/docs/website/documentation/changes/39.html
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/patch/pcpatch.c
/petsc/src/ksp/pc/impls/redundant/redundant.c
/petsc/src/snes/examples/tutorials/ex13.c
/petsc/src/snes/examples/tutorials/ex56.c
/petsc/src/snes/examples/tutorials/ex77.c
/petsc/src/snes/interface/snesut.c
/petsc/src/snes/utils/convest.c
/petsc/src/snes/utils/dmadapt.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/tao/examples/tutorials/ex3.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/ex11_sa.c
/petsc/src/ts/examples/tutorials/ex18.c
/petsc/src/ts/impls/mimex/mimex.c
1ac5c60413-Aug-2019 Satish Balay <balay@mcs.anl.gov>

Merged in balay/updated-med-4.0.0/master (pull request #1662)

Balay/updated med 4.0.0/master

Approved-by: BarryFSmith <bsmith@mcs.anl.gov>


config/packages/med.py
/petsc/config/examples/arch-linux-pkgs-gcov.py
/petsc/config/examples/arch-osx-10.6-cxx-pkgs-opt.py
/petsc/include/petscviewerhdf5.h
/petsc/lib/petsc/bin/maint/buildtest
/petsc/src/dm/impls/plex/examples/tests/ex1.c
/petsc/src/dm/impls/plex/examples/tests/ex18.c
/petsc/src/dm/impls/plex/examples/tests/ex24.c
/petsc/src/dm/impls/plex/examples/tests/output/ex18_9_hdf5.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_9_hdf5_repart.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_9_hdf5_repart_ppu.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_9_hdf5_seqload.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_9_hdf5_seqload_metis.out
/petsc/src/dm/impls/plex/examples/tutorials/ex5.c
/petsc/src/dm/impls/plex/examples/tutorials/output/ex5_9_hdf5.out
/petsc/src/dm/impls/plex/examples/tutorials/output/ex5_9_hdf5_repart.out
/petsc/src/dm/impls/plex/examples/tutorials/output/ex5_9_hdf5_repart_ppu.out
/petsc/src/dm/impls/plex/examples/tutorials/output/ex5_9_hdf5_seqload.out
/petsc/src/dm/impls/plex/examples/tutorials/output/ex5_9_hdf5_seqload_metis.out
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/miscellaneous/mailing-lists.html
/petsc/src/ksp/ksp/examples/tutorials/output/ex72_aijcusparse.out
/petsc/src/ksp/pc/examples/tests/ex6.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/hmg/hmg.c
/petsc/src/mat/examples/tests/ex89.c
/petsc/src/mat/examples/tests/ex90.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex89_1.out
/petsc/src/mat/examples/tests/output/ex90_1.out
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpiptap.c
/petsc/src/mat/impls/aij/seq/inode.c
/petsc/src/mat/impls/maij/maij.c
/petsc/src/snes/impls/nasm/nasm.c
/petsc/src/snes/linesearch/impls/bt/linesearchbt.c
/petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c
/petsc/src/vec/vec/examples/tests/ex48.c
db04d98708-Aug-2019 Satish Balay <balay@mcs.anl.gov>

configure: fix .libraries.toStringNoDupes() to correctly handle mpi.lib

Reported-by: Pierre Jolivet <pierre.jolivet@enseeiht.fr>


/petsc/.travis.yml
/petsc/bitbucket-pipelines.yml
config/libraries.py
/petsc/config/configure.py
/petsc/include/petsc/finclude/petscsnes.h
/petsc/include/petsccxxcomplexfix.h
/petsc/include/petscmat.h
/petsc/include/petscmath.h
/petsc/include/petscsnes.h
/petsc/include/petscsys.h
/petsc/include/petscsystypes.h
/petsc/lib/petsc/conf/test
/petsc/makefile
/petsc/share/petsc/datafiles/meshes/hybrid_hexwedge.exo
/petsc/share/petsc/datafiles/meshes/hybrid_hexwedge.msh
/petsc/src/benchmarks/benchmarkExample.py
/petsc/src/benchmarks/streams/MPIVersion.c
/petsc/src/benchmarks/streams/OpenMPVersion.c
/petsc/src/benchmarks/streams/makefile
/petsc/src/benchmarks/streams/process.py
/petsc/src/dm/examples/tests/ex1f.F90
/petsc/src/dm/examples/tests/makefile
/petsc/src/dm/examples/tests/output/ex1f_1.out
/petsc/src/dm/examples/tutorials/ex10.c
/petsc/src/dm/impls/plex/examples/tests/ex1.c
/petsc/src/dm/impls/plex/examples/tests/ex18.c
/petsc/src/dm/impls/plex/examples/tests/ex32.c
/petsc/src/dm/impls/plex/examples/tests/output/ex18_1_1d_dist1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_1_quad_dist1_interpolate-none.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_1_quad_dist1_interpolate-parallel.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_1_tri_dist1_interpolate-none.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_1_tri_dist1_interpolate-parallel.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_2c.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_4_hex_dist1_interpolate-none.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_4_hex_dist1_interpolate-parallel.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_4_tet_dist1_interpolate-none.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_4_tet_dist1_interpolate-parallel.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_7_exo_metis.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_7_hdf5_repart.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_7_hdf5_repart_ppu.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_7_hdf5_seqload.out
/petsc/src/dm/impls/plex/examples/tests/output/ex18_7_hdf5_seqload_metis.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_exodus_17_hyb3d_interp_ascii.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_gmsh_17_hyb3d_ascii.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_gmsh_17_hyb3d_interp_ascii.out
/petsc/src/dm/impls/plex/ftn-custom/makefile
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexexodusii.c
/petsc/src/dm/impls/plex/plexgmsh.c
/petsc/src/dm/impls/plex/plexinterpolate.c
/petsc/src/dm/impls/plex/plexmed.c
/petsc/src/ksp/ksp/examples/tutorials/ex6.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex6_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex6_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex6_3.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex73_mg_2lv_2mg_alt.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex74_1_alt_4.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex74_3_alt_3.out
/petsc/src/ksp/pc/impls/shell/shellpc.c
/petsc/src/mat/examples/tests/ex134.c
/petsc/src/mat/examples/tests/ex231.cxx
/petsc/src/mat/examples/tests/ex232.c
/petsc/src/mat/examples/tests/ex233.c
/petsc/src/mat/examples/tests/ex234.c
/petsc/src/mat/examples/tests/ex28.c
/petsc/src/mat/examples/tests/ex74.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex134_1.out
/petsc/src/mat/examples/tests/output/ex232_1.out
/petsc/src/mat/examples/tests/output/ex233_aijbaij_csr.out
/petsc/src/mat/examples/tests/output/ex233_sbaij_csr.out
/petsc/src/mat/examples/tests/output/ex234_1.out
/petsc/src/mat/examples/tests/output/ex28_1.out
/petsc/src/mat/examples/tests/output/ex28_2.out
/petsc/src/mat/examples/tests/output/ex28_3.out
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/baij/seq/baij.h
/petsc/src/mat/impls/dense/seq/cuda/densecuda.cu
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/mpi/sbaijov.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij2.c
/petsc/src/mat/impls/sell/seq/sell.c
/petsc/src/mat/matfd/fdmatrix.c
/petsc/src/snes/examples/tutorials/output/ex19_cuda_2_alt_4.out
/petsc/src/snes/examples/tutorials/output/ex19_ngmres_fas_ms.out
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/linesearch/interface/linesearchregi.c
/petsc/src/sys/examples/tests/ex15.c
/petsc/src/sys/examples/tests/ex25.c
/petsc/src/sys/examples/tests/ex4.c
/petsc/src/sys/examples/tests/ex49f.F90
/petsc/src/sys/examples/tests/makefile
/petsc/src/sys/examples/tests/output/ex25_1.out
/petsc/src/sys/examples/tests/output/ex49f_1.out
/petsc/src/sys/utils/mpimesg.c
/petsc/src/sys/utils/sorti.c
/petsc/src/tao/leastsquares/examples/tutorials/output/chwirut2_1_alt_4.out
/petsc/src/tao/linesearch/impls/morethuente/morethuente.c
/petsc/src/ts/examples/tests/output/ex21_1_bdf_ngmres_fas_ms.out
/petsc/src/ts/examples/tests/output/ex21_1_bdf_ngmres_fas_ngs.out
/petsc/src/ts/examples/tests/output/ex21_2_bdf_ngmres_fas_ms.out
/petsc/src/ts/examples/tests/output/ex21_2_bdf_ngmres_fas_ngs.out
/petsc/src/ts/examples/tutorials/power_grid/ex8.c
/petsc/src/vec/is/ao/examples/tests/ex3d/ex3.cxx
/petsc/src/vec/vec/impls/mpi/mpicuda/mpicuda.cu
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu
/petsc/src/vec/vec/impls/seq/seqcuda/vecscattercuda.cu
/petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx
6b804ed230-Jul-2019 Karl Rupp <me@karlrupp.net>

Merge branch 'stefano_zampini/GPU-matdensecuda' [PR #1911]

* stefano_zampini/GPU-matdensecuda:
GPU: Initial implementation for SeqDense class on GPUs.


config/packages/cuda.py
/petsc/include/petsc/finclude/petscmat.h
/petsc/include/petsc/private/matimpl.h
/petsc/include/petscmat.h
/petsc/include/petscsys.h
/petsc/src/dm/dt/fe/impls/opencl/feopencl.c
/petsc/src/docs/website/documentation/installation.html
/petsc/src/mat/examples/tests/ex1.c
/petsc/src/mat/examples/tests/ex24.c
/petsc/src/mat/examples/tests/ex32.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex1_2.out
/petsc/src/mat/impls/aij/mpi/fdmpiaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/fdaij.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/aij/seq/seqviennacl/aijviennacl.cxx
/petsc/src/mat/impls/dense/seq/cuda/densecuda.cu
/petsc/src/mat/impls/dense/seq/cuda/makefile
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/dense/seq/dense.h
/petsc/src/mat/impls/dense/seq/makefile
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/matregis.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/utils/axpy.c
/petsc/src/snes/examples/tutorials/ex77.c
/petsc/src/snes/utils/dmdasnes.c
/petsc/src/tao/examples/tutorials/ex4.c
/petsc/src/vec/vec/impls/seq/seqcuda/cudavecimpl.h
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu
/petsc/src/vec/vscat/examples/ex9.c
/petsc/src/vec/vscat/examples/output/ex9_1.out
/petsc/src/vec/vscat/examples/output/ex9_2.out
/petsc/src/vec/vscat/examples/output/ex9_3.out

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