Add building for xSDKTrilinos test examples

Funded-by: IDEAS
Project: xSDK
Time: .1 hour

Enable complex scalars with VECCUDA

Merge branch 'pr421/alex/feature-veccuda'

* pr421/alex/feature-veccuda
The rationale of this pull request is to have GPU-enabled vectors purely based on CUDA,
and with the possibility of placing a u

Merge branch 'pr421/alex/feature-veccuda'

* pr421/alex/feature-veccuda
The rationale of this pull request is to have GPU-enabled vectors purely based on CUDA,
and with the possibility of placing a user-provided array on the GPU side.

Conflicts:
src/vec/vec/impls/seq/seqcusp/cuspvecimpl.h
src/vec/vec/impls/seq/seqviennacl/viennaclvecimpl.h

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Update hypre to its release version

Funded-by: IDEAS
Project: xSDK
Time: 0 hours

Updates for xSDKTrilinos builds

Funded-by: IDEAS
Project: xSDK
Time: 2 hours testing

Added --download-xsdktrilinos

Funded-by: IDEAS
Project: xSDK
Time: 1.5 hours

Metis tries to use backtrace which requires -lexecinfo on some systems such as freebsd
Remove -lexecinfo from freebsd configure files since it is only needed by metis

configure: improve handling of optional package dependencies [odeps]

There are 2 parts to this.
- handle dependencies during the link test for the package
- enable this depencency feature in the e

configure: improve handling of optional package dependencies [odeps]

There are 2 parts to this.
- handle dependencies during the link test for the package
- enable this depencency feature in the externalpackage.

Previously this was done only by GNUPackage. Now move the first part into
the common Package() class - so that CMakePackage can also use the
dependencies correctly during the link test

And update Trilinos to use odeps [aka the first feature]. The second part
is implemented manually in Trilinos.py

Reported-by: "Klinvex, Alicia Marie" <amklinv@sandia.gov>
Funded-by: IDEAS

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Added --download-PACKAGENAME-cmake-arguments="options"

Funded-by: IDEAS
Project: xSDK
Time: .1 hour
Thanks-to: James M. Willenbring <jmwille@sandia.gov>

xsdk: switch trilinos back to tracking 12.6 release branch [as it now has the superlu_dist patch[

Funded-by: IDEAS

xsdk: update superlu_dist and trilinos to snapshots that are compatible with each other [and petsc]

Reported-by: "Klinvex, Alicia Marie" <amklinv@sandia.gov>
Funded-by: IDEAS

trilinos: LDFLAGS from PETSc configure should be given to cmake packages as CMAKE_EXE_LINKER_FLAGS

Reported-by: "Klinvex, Alicia Marie" <amklinv@sandia.gov>
Funded-by: IDEAS

configure: when building externalpackages via git - do a 'git clean' so that all temp files [including generated configure] get deleted
Also add additional checks to make sure the externalpackage dir

configure: when building externalpackages via git - do a 'git clean' so that all temp files [including generated configure] get deleted
Also add additional checks to make sure the externalpackage dir is indeed a git repo. [before invoking clean]

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configure: fix bug with using -with-visibility=0

nightlybuilds: check for petsc4py failure - before skipping testexamples.
This reverts cdd1d3f5de181ea9389560cde7c14a230e58cc12

Merge branch 'balay/update-superlu_dist_mar-16-294e2d0'

Merge remote-tracking branch 'origin/balay/fix-externalpackage-build-shared'

Merge branch 'maint'

metis: update with fix for Xcode 7.3 thread issue

ld: section __DATA/__thread_bss extends beyond end of file, file 'CMakeFiles/metis.dir/__/GKlib/error.c.o' for architecture x86_64

Reported-by: Pet

metis: update with fix for Xcode 7.3 thread issue

ld: section __DATA/__thread_bss extends beyond end of file, file 'CMakeFiles/metis.dir/__/GKlib/error.c.o' for architecture x86_64

Reported-by: Peter Lichtner <peter.lichtner@gmail.com>
Reported-by: Bastien Chaudet <bastien.chaudet.1@ulaval.ca>

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switch chombo, saws to use a tested gitcommit

superlu_dist: update to snapshot with superlu_dist_options_t, superlu_dist_mem_usage_t changes

superlu_dist: use a working snapshot.

updated to latest hypre prelease version

Funded-by: IDEAS
Project: xSDK
Time: 0 hours
Reported-by: Ulrike Meier Yang <yang11@llnl.gov>

Added os.path.expanduser() for uses of ~ in --prefix

Thanks-to: Alicia Marie Klinvex <amklinv@sandia.gov>

externalpackages: add checkSharedLibrariesEnabled() so all packages check this routine
consistantly to enable or disable sharedbuild.

Also flag --with-shared-libraries=0 --with-packages-shared=1 is

externalpackages: add checkSharedLibrariesEnabled() so all packages check this routine
consistantly to enable or disable sharedbuild.

Also flag --with-shared-libraries=0 --with-packages-shared=1 is not supported because
fPIC check cannot be enabled for this case. [which is a requirement to work correctly]

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