History log of /petsc/config/BuildSystem/ (Results 4526 – 4550 of 4739)
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5c606b2517-Jun-2014 Satish Balay <balay@mcs.anl.gov>

Merge branch 'balay/chk-optflags-in-cflags'


config/compilerFlags.py
/petsc/config/PETSc/utilities/libraryOptions.py
/petsc/include/finclude/petscisdef.h
/petsc/include/finclude/petscsysdef.h
95b11c9d16-Jun-2014 Satish Balay <balay@mcs.anl.gov>

moab: update to version 4.6.3


/petsc/conf/test
config/packages/MOAB.py
/petsc/config/PETSc/packages/cuda.py
/petsc/config/PETSc/packages/elemental.py
/petsc/config/PETSc/packages/viennacl.py
/petsc/config/PETSc/utilities/Regression.py
/petsc/config/examples/arch-freebsd-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-linux-gcc-ifc-cmplx.py
/petsc/config/examples/arch-linux-pkgs-opt.py
/petsc/config/examples/arch-linux-pkgs-valgrind.py
/petsc/config/examples/arch-osx-10.6-cxx-cmplx-pkgs-dbg.py
/petsc/include/finclude/ftn-custom/petscis.h90
/petsc/include/finclude/ftn-custom/petscisdef.h90
/petsc/include/finclude/ftn-custom/petscishide.h90
/petsc/include/finclude/ftn-custom/petscvec.h90
/petsc/include/finclude/ftn-custom/petscvecdef.h90
/petsc/include/finclude/ftn-custom/petscvechide.h90
/petsc/include/finclude/petscdmdef.h
/petsc/include/finclude/petscvecdef.h
/petsc/include/mpiuni/mpif.h
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petsc-private/dmpleximpl.h
/petsc/include/petsc-private/petscdsimpl.h
/petsc/include/petsc-private/petscfeimpl.h
/petsc/include/petsc-private/petscimpl.h
/petsc/include/petsc-private/taoimpl.h
/petsc/include/petsc-private/taolinesearchimpl.h
/petsc/include/petscdm.h
/petsc/include/petscdmda.h
/petsc/include/petscdmplex.h
/petsc/include/petscds.h
/petsc/include/petscdstypes.h
/petsc/include/petscfe.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/include/petscsnes.h
/petsc/include/petsctao.h
/petsc/include/petsctaolinesearch.h
/petsc/src/dm/dt/interface/dtds.c
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/dt/interface/dtfv.c
/petsc/src/dm/dt/interface/makefile
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/da/dalocal.c
/petsc/src/dm/impls/plex/examples/tests/ex3.c
/petsc/src/dm/impls/plex/examples/tutorials/ex1.c
/petsc/src/dm/impls/plex/examples/tutorials/ex3f90.F
/petsc/src/dm/impls/plex/ftn-custom/makefile
/petsc/src/dm/impls/plex/ftn-custom/zplexexodusii.c
/petsc/src/dm/impls/plex/ftn-custom/zplexsubmesh.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexfem.c
/petsc/src/dm/impls/plex/plexhdf5.c
/petsc/src/dm/impls/plex/plexrefine.c
/petsc/src/dm/interface/dlregisdmdm.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmi.c
/petsc/src/dm/interface/dmregall.c
/petsc/src/docs/tex/manual/intro.tex
/petsc/src/docs/tex/manual/manual.tex
/petsc/src/docs/tex/manual/part1.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/referencing.html
/petsc/src/ksp/ksp/examples/tutorials/ex52.c
/petsc/src/ksp/ksp/examples/tutorials/ex54.c
/petsc/src/ksp/ksp/examples/tutorials/ex59.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddc.h
/petsc/src/ksp/pc/impls/bddc/bddcfetidp.c
/petsc/src/ksp/pc/impls/bddc/bddcgraph.c
/petsc/src/ksp/pc/impls/bddc/bddcnullspace.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.h
/petsc/src/ksp/pc/impls/bddc/bddcstructs.h
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/ksp/pc/impls/redundant/redundant.c
/petsc/src/ksp/pc/impls/shell/ftn-custom/zshellpcf.c
/petsc/src/mat/color/impls/makefile
/petsc/src/mat/color/impls/power/makefile
/petsc/src/mat/color/impls/power/power.c
/petsc/src/mat/color/interface/matcoloringregi.c
/petsc/src/mat/examples/tests/ex169.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex169_1.out
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/is/matis.c
/petsc/src/mat/impls/maij/maij.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/snes/examples/tutorials/ex12.c
/petsc/src/snes/examples/tutorials/ex16.c
/petsc/src/snes/examples/tutorials/ex54.c
/petsc/src/snes/examples/tutorials/ex55.c
/petsc/src/snes/examples/tutorials/ex62.c
/petsc/src/snes/examples/tutorials/ex74f.F90
/petsc/src/snes/examples/tutorials/ex74fcomd.h
/petsc/src/snes/examples/tutorials/ex74ftube.h
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/network/pflow/datafiles/case9.m
/petsc/src/snes/examples/tutorials/network/pflow/makefile
/petsc/src/snes/examples/tutorials/network/pflow/pf.c
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/fas/fasfunc.c
/petsc/src/snes/impls/fas/fasimpls.h
/petsc/src/snes/interface/snes.c
/petsc/src/sys/classes/viewer/interface/viewa.c
/petsc/src/sys/logging/plog.c
/petsc/src/sys/logging/utils/eventlog.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/utils/hash.h
/petsc/src/tao/interface/dlregistao.c
/petsc/src/tao/interface/taosolver.c
/petsc/src/tao/linesearch/interface/taolinesearch.c
/petsc/src/tao/makefile
/petsc/src/ts/event/tsevent.c
/petsc/src/ts/examples/tutorials/ex20.c
/petsc/src/ts/examples/tutorials/ex40.c
/petsc/src/ts/examples/tutorials/ex41.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/interface/ts.c
/petsc/src/ts/utils/dmplexts.c
/petsc/src/vec/is/utils/f90-custom/zvsectionisf.c
/petsc/src/vec/is/utils/vsectionis.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/vector.c
7acc164816-Jun-2014 Satish Balay <balay@mcs.anl.gov>

configure: if user specifies optimization flags [-g or -O or equivalent] via CFLAGS
then do not set default optimzation flags


/petsc/conf/test
config/compilerFlags.py
/petsc/config/PETSc/packages/cuda.py
/petsc/config/PETSc/packages/elemental.py
/petsc/config/PETSc/packages/viennacl.py
/petsc/config/PETSc/utilities/Regression.py
/petsc/config/examples/arch-freebsd-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-linux-gcc-ifc-cmplx.py
/petsc/config/examples/arch-linux-pkgs-opt.py
/petsc/config/examples/arch-linux-pkgs-valgrind.py
/petsc/config/examples/arch-osx-10.6-cxx-cmplx-pkgs-dbg.py
/petsc/include/finclude/ftn-custom/petscis.h90
/petsc/include/finclude/ftn-custom/petscisdef.h90
/petsc/include/finclude/ftn-custom/petscishide.h90
/petsc/include/finclude/ftn-custom/petscvec.h90
/petsc/include/finclude/ftn-custom/petscvecdef.h90
/petsc/include/finclude/ftn-custom/petscvechide.h90
/petsc/include/finclude/petscdmdef.h
/petsc/include/finclude/petscvecdef.h
/petsc/include/mpiuni/mpif.h
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petsc-private/dmpleximpl.h
/petsc/include/petsc-private/petscdsimpl.h
/petsc/include/petsc-private/petscfeimpl.h
/petsc/include/petsc-private/petscimpl.h
/petsc/include/petsc-private/taoimpl.h
/petsc/include/petsc-private/taolinesearchimpl.h
/petsc/include/petscdm.h
/petsc/include/petscdmda.h
/petsc/include/petscdmplex.h
/petsc/include/petscds.h
/petsc/include/petscdstypes.h
/petsc/include/petscfe.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/include/petscsnes.h
/petsc/include/petsctao.h
/petsc/include/petsctaolinesearch.h
/petsc/src/dm/dt/interface/dtds.c
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/dt/interface/dtfv.c
/petsc/src/dm/dt/interface/makefile
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/da/dalocal.c
/petsc/src/dm/impls/plex/examples/tests/ex3.c
/petsc/src/dm/impls/plex/examples/tutorials/ex1.c
/petsc/src/dm/impls/plex/examples/tutorials/ex3f90.F
/petsc/src/dm/impls/plex/ftn-custom/makefile
/petsc/src/dm/impls/plex/ftn-custom/zplexexodusii.c
/petsc/src/dm/impls/plex/ftn-custom/zplexsubmesh.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexfem.c
/petsc/src/dm/impls/plex/plexhdf5.c
/petsc/src/dm/impls/plex/plexrefine.c
/petsc/src/dm/interface/dlregisdmdm.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmi.c
/petsc/src/dm/interface/dmregall.c
/petsc/src/docs/tex/manual/intro.tex
/petsc/src/docs/tex/manual/manual.tex
/petsc/src/docs/tex/manual/part1.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/referencing.html
/petsc/src/ksp/ksp/examples/tutorials/ex52.c
/petsc/src/ksp/ksp/examples/tutorials/ex54.c
/petsc/src/ksp/ksp/examples/tutorials/ex59.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddc.h
/petsc/src/ksp/pc/impls/bddc/bddcfetidp.c
/petsc/src/ksp/pc/impls/bddc/bddcgraph.c
/petsc/src/ksp/pc/impls/bddc/bddcnullspace.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.h
/petsc/src/ksp/pc/impls/bddc/bddcstructs.h
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/ksp/pc/impls/redundant/redundant.c
/petsc/src/ksp/pc/impls/shell/ftn-custom/zshellpcf.c
/petsc/src/mat/color/impls/makefile
/petsc/src/mat/color/impls/power/makefile
/petsc/src/mat/color/impls/power/power.c
/petsc/src/mat/color/interface/matcoloringregi.c
/petsc/src/mat/examples/tests/ex169.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex169_1.out
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/is/matis.c
/petsc/src/mat/impls/maij/maij.c
/petsc/src/snes/examples/tutorials/ex12.c
/petsc/src/snes/examples/tutorials/ex16.c
/petsc/src/snes/examples/tutorials/ex54.c
/petsc/src/snes/examples/tutorials/ex55.c
/petsc/src/snes/examples/tutorials/ex62.c
/petsc/src/snes/examples/tutorials/ex74f.F90
/petsc/src/snes/examples/tutorials/ex74fcomd.h
/petsc/src/snes/examples/tutorials/ex74ftube.h
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/network/pflow/datafiles/case9.m
/petsc/src/snes/examples/tutorials/network/pflow/makefile
/petsc/src/snes/examples/tutorials/network/pflow/pf.c
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/fas/fasfunc.c
/petsc/src/snes/impls/fas/fasimpls.h
/petsc/src/snes/interface/snes.c
/petsc/src/sys/classes/viewer/interface/viewa.c
/petsc/src/sys/logging/plog.c
/petsc/src/sys/logging/utils/eventlog.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/utils/hash.h
/petsc/src/tao/interface/dlregistao.c
/petsc/src/tao/interface/taosolver.c
/petsc/src/tao/linesearch/interface/taolinesearch.c
/petsc/src/tao/makefile
/petsc/src/ts/event/tsevent.c
/petsc/src/ts/examples/tutorials/ex20.c
/petsc/src/ts/examples/tutorials/ex40.c
/petsc/src/ts/examples/tutorials/ex41.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/interface/ts.c
/petsc/src/ts/utils/dmplexts.c
/petsc/src/vec/is/utils/f90-custom/zvsectionisf.c
/petsc/src/vec/is/utils/vsectionis.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/vector.c
8c25fe2307-Jun-2014 Barry Smith <bsmith@mcs.anl.gov>

Merge branch 'barry/elemental'


/petsc/bin/maint/findvisibleprivatefunctions
/petsc/conf/test
config/compilers.py
/petsc/config/PETSc/packages/elemental.py
/petsc/config/PETSc/utilities/Regression.py
/petsc/include/mpiuni/mpi.h
/petsc/include/petsc-private/dmnetworkimpl.h
/petsc/include/petsc-private/vecimpl.h
/petsc/include/petscdm.h
/petsc/include/petscdmnetwork.h
/petsc/include/petscsys.h
/petsc/src/benchmarks/streams/MPIVersion.c
/petsc/src/contrib/nightlysummary/runhtml.py
/petsc/src/dm/impls/makefile
/petsc/src/dm/impls/network/makefile
/petsc/src/dm/impls/network/network.c
/petsc/src/dm/impls/network/networkcreate.c
/petsc/src/dm/interface/dmregall.c
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/linearsolvertable.html
/petsc/src/ksp/ksp/examples/tutorials/ex52f.F
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex52f_1.out
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/seq/klu/klu.c
/petsc/src/mat/impls/elemental/matelem.cxx
/petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/network/makefile
/petsc/src/snes/examples/tutorials/network/pflow/PFReadData.c
/petsc/src/snes/examples/tutorials/network/pflow/datafiles/case9.m
/petsc/src/snes/examples/tutorials/network/pflow/makefile
/petsc/src/snes/examples/tutorials/network/pflow/pf.c
/petsc/src/snes/examples/tutorials/network/pflow/pf.h
/petsc/src/snes/examples/tutorials/network/pflow/pfoptions
/petsc/src/snes/impls/fas/fasfunc.c
/petsc/src/sys/mpiuni/mpi.c
/petsc/src/sys/mpiuni/mpitime.c
/petsc/src/sys/totalview/tv_data_display.c
/petsc/src/sys/totalview/tv_data_display.h
ab62d6dc05-Jun-2014 Satish Balay <balay@mcs.anl.gov>

Merge branch 'balay/check-mkl-before-acml'


/petsc/bin/maint/update-docs.py
config/packages/BlasLapack.py
/petsc/config/PETSc/packages/sowing.py
/petsc/include/finclude/ftn-custom/petscdmda.h90
/petsc/include/petsc-private/vecimpl.h
/petsc/include/petscdmda.h
/petsc/include/petscis.h
/petsc/include/petscpc.h
/petsc/include/petsctao.h
/petsc/include/petscvec.h
/petsc/src/benchmarks/streams/BasicVersion.c
/petsc/src/benchmarks/streams/MPIVersion.c
/petsc/src/benchmarks/streams/PthreadVersion.c
/petsc/src/benchmarks/streams/SSEVersion.c
/petsc/src/dm/examples/tests/ex4.c
/petsc/src/dm/examples/tests/ex6.c
/petsc/src/dm/examples/tests/makefile
/petsc/src/dm/impls/da/da3.c
/petsc/src/dm/impls/da/daindex.c
/petsc/src/dm/impls/da/dainterp.c
/petsc/src/dm/impls/da/f90-custom/makefile
/petsc/src/dm/impls/da/ftn-custom/makefile
/petsc/src/dm/impls/da/hypre/mhyp.c
/petsc/src/dm/impls/plex/plexdistribute.c
/petsc/src/dm/impls/plex/plexlabel.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/documentation/installation.html
/petsc/src/docs/website/documentation/taosolvertable.html
/petsc/src/ksp/ksp/examples/tests/ex14.c
/petsc/src/ksp/ksp/examples/tests/ex19.c
/petsc/src/ksp/ksp/examples/tests/ex26.c
/petsc/src/ksp/ksp/examples/tests/ex29.c
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tests/output/ex14_1.out
/petsc/src/ksp/ksp/examples/tutorials/ex14f.F
/petsc/src/ksp/ksp/examples/tutorials/ex43.c
/petsc/src/ksp/ksp/examples/tutorials/ex49.c
/petsc/src/ksp/ksp/examples/tutorials/ex52.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/utils/schurm.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/is/matis.c
/petsc/src/mat/impls/localref/mlocalref.c
/petsc/src/snes/examples/tests/ex5.c
/petsc/src/snes/examples/tests/makefile
/petsc/src/snes/examples/tutorials/ex5f.F
/petsc/src/snes/examples/tutorials/ex5f90.F
/petsc/src/snes/examples/tutorials/ex5f90t.F
/petsc/src/sys/objects/pinit.c
/petsc/src/tao/bound/examples/tutorials/plate2f.F
/petsc/src/tao/bound/impls/blmvm/blmvm.c
/petsc/src/tao/bound/impls/blmvm/makefile
/petsc/src/tao/bound/impls/bqpip/bqpip.c
/petsc/src/tao/bound/impls/bqpip/makefile
/petsc/src/tao/bound/impls/gpcg/gpcg.c
/petsc/src/tao/bound/impls/gpcg/makefile
/petsc/src/tao/bound/impls/tron/makefile
/petsc/src/tao/bound/impls/tron/tron.c
/petsc/src/tao/bound/utils/isutil.c
/petsc/src/tao/complementarity/impls/asls/asfls.c
/petsc/src/tao/complementarity/impls/asls/asils.c
/petsc/src/tao/complementarity/impls/asls/makefile
/petsc/src/tao/complementarity/impls/ssls/makefile
/petsc/src/tao/complementarity/impls/ssls/ssfls.c
/petsc/src/tao/complementarity/impls/ssls/ssils.c
/petsc/src/tao/constrained/impls/ipm/ipm.c
/petsc/src/tao/constrained/impls/ipm/makefile
/petsc/src/tao/interface/makefile
/petsc/src/tao/interface/taosolver.c
/petsc/src/tao/leastsquares/examples/tutorials/output/chwirut1_1.out
/petsc/src/tao/leastsquares/impls/pounders/makefile
/petsc/src/tao/leastsquares/impls/pounders/pounders.c
/petsc/src/tao/pde_constrained/impls/lcl/lcl.c
/petsc/src/tao/pde_constrained/impls/lcl/makefile
/petsc/src/tao/unconstrained/examples/tutorials/eptorsion1.c
/petsc/src/tao/unconstrained/impls/bmrm/bmrm.c
/petsc/src/tao/unconstrained/impls/bmrm/makefile
/petsc/src/tao/unconstrained/impls/cg/makefile
/petsc/src/tao/unconstrained/impls/cg/taocg.c
/petsc/src/tao/unconstrained/impls/lmvm/lmvm.c
/petsc/src/tao/unconstrained/impls/lmvm/makefile
/petsc/src/tao/unconstrained/impls/neldermead/makefile
/petsc/src/tao/unconstrained/impls/neldermead/neldermead.c
/petsc/src/tao/unconstrained/impls/nls/makefile
/petsc/src/tao/unconstrained/impls/nls/nls.c
/petsc/src/tao/unconstrained/impls/ntl/makefile
/petsc/src/tao/unconstrained/impls/ntl/ntl.c
/petsc/src/tao/unconstrained/impls/ntr/makefile
/petsc/src/tao/unconstrained/impls/ntr/ntr.c
/petsc/src/tao/unconstrained/impls/owlqn/makefile
/petsc/src/tao/unconstrained/impls/owlqn/owlqn.c
/petsc/src/vec/is/is/examples/tutorials/ex4.c
/petsc/src/vec/is/is/examples/tutorials/ex5.c
/petsc/src/vec/is/is/examples/tutorials/makefile
/petsc/src/vec/is/is/examples/tutorials/output/ex4_1.out
/petsc/src/vec/is/is/examples/tutorials/output/ex5_1.out
/petsc/src/vec/is/is/interface/ftn-custom/zindexf.c
/petsc/src/vec/is/utils/f90-custom/makefile
/petsc/src/vec/is/utils/f90-custom/zisltogf.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/is/utils/makefile
/petsc/src/vec/is/utils/pmap.c
/petsc/src/vec/vec/examples/tests/ex45.c
/petsc/src/vec/vec/examples/tests/makefile
/petsc/src/vec/vec/examples/tests/output/ex45_1.out
/petsc/src/vec/vec/impls/mpi/pbvec.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/utils/vinv.c
0c18141c04-Jun-2014 Barry Smith <bsmith@mcs.anl.gov>

updates from Jack


/petsc/bin/maint/update-docs.py
config/compilers.py
/petsc/config/PETSc/packages/elemental.py
/petsc/config/builder.py
/petsc/include/finclude/ftn-custom/petscdmda.h90
/petsc/include/petsc-private/dmdaimpl.h
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petsc-private/isimpl.h
/petsc/include/petsc-private/petscfeimpl.h
/petsc/include/petsc-private/vecimpl.h
/petsc/include/petscbag.h
/petsc/include/petscdm.h
/petsc/include/petscdmda.h
/petsc/include/petscfe.h
/petsc/include/petscis.h
/petsc/include/petscmat.h
/petsc/include/petscsys.h
/petsc/include/petscvec.h
/petsc/src/benchmarks/streams/BasicVersion.c
/petsc/src/benchmarks/streams/MPIVersion.c
/petsc/src/benchmarks/streams/PthreadVersion.c
/petsc/src/benchmarks/streams/SSEVersion.c
/petsc/src/contrib/fun3d/comp/flow.c
/petsc/src/contrib/fun3d/comp/makefile
/petsc/src/contrib/fun3d/incomp/flow.c
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/examples/tests/ex11.c
/petsc/src/dm/examples/tests/ex20.c
/petsc/src/dm/examples/tests/ex4.c
/petsc/src/dm/examples/tests/ex6.c
/petsc/src/dm/examples/tests/makefile
/petsc/src/dm/examples/tests/output/ex11_1.out
/petsc/src/dm/examples/tests/output/ex11_2.out
/petsc/src/dm/examples/tests/output/ex11_3.out
/petsc/src/dm/impls/circuit/circuitcreate.c
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/composite/packm.c
/petsc/src/dm/impls/da/da1.c
/petsc/src/dm/impls/da/da2.c
/petsc/src/dm/impls/da/da3.c
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/da/dadestroy.c
/petsc/src/dm/impls/da/dadist.c
/petsc/src/dm/impls/da/dagtol.c
/petsc/src/dm/impls/da/daindex.c
/petsc/src/dm/impls/da/dainterp.c
/petsc/src/dm/impls/da/dascatter.c
/petsc/src/dm/impls/da/f90-custom/makefile
/petsc/src/dm/impls/da/fdda.c
/petsc/src/dm/impls/da/ftn-custom/makefile
/petsc/src/dm/impls/da/ftn-custom/zdagetscatterf.c
/petsc/src/dm/impls/da/hypre/mhyp.c
/petsc/src/dm/impls/moab/dmmoab.cxx
/petsc/src/dm/impls/patch/patchcreate.c
/petsc/src/dm/impls/plex/examples/tests/output/ex1_6.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_8.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_25.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_26.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_27.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_28.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_29.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_30.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_17.out
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/plex/plexdistribute.c
/petsc/src/dm/impls/plex/plexlabel.c
/petsc/src/dm/impls/redundant/dmredundant.c
/petsc/src/dm/impls/sliced/sliced.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmi.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/ksp/ksp/examples/tests/ex14.c
/petsc/src/ksp/ksp/examples/tests/ex19.c
/petsc/src/ksp/ksp/examples/tests/ex26.c
/petsc/src/ksp/ksp/examples/tests/ex29.c
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tests/output/ex14_1.out
/petsc/src/ksp/ksp/examples/tutorials/ex14f.F
/petsc/src/ksp/ksp/examples/tutorials/ex43.c
/petsc/src/ksp/ksp/examples/tutorials/ex49.c
/petsc/src/ksp/ksp/examples/tutorials/ex52.c
/petsc/src/ksp/ksp/examples/tutorials/ex59.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/interface/iterativ.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/mat/examples/tests/ex139.c
/petsc/src/mat/examples/tests/ex159.c
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/baij/mpi/mmbaij.c
/petsc/src/mat/impls/elemental/matelem.cxx
/petsc/src/mat/impls/is/matis.c
/petsc/src/mat/impls/localref/mlocalref.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tests/ex5.c
/petsc/src/snes/examples/tests/makefile
/petsc/src/snes/examples/tutorials/ex10d/ex10.c
/petsc/src/snes/examples/tutorials/ex48.c
/petsc/src/snes/examples/tutorials/ex5f.F
/petsc/src/snes/examples/tutorials/ex5f90.F
/petsc/src/snes/examples/tutorials/ex5f90t.F
/petsc/src/snes/interface/snes.c
/petsc/src/sys/classes/bag/bag.c
/petsc/src/sys/memory/mal.c
/petsc/src/sys/objects/pinit.c
/petsc/src/tao/bound/examples/tutorials/plate2f.F
/petsc/src/ts/examples/tutorials/ex30.cxx
/petsc/src/vec/is/is/examples/tests/ex5.c
/petsc/src/vec/is/is/examples/tutorials/ex4.c
/petsc/src/vec/is/is/examples/tutorials/ex5.c
/petsc/src/vec/is/is/examples/tutorials/makefile
/petsc/src/vec/is/is/examples/tutorials/output/ex4_1.out
/petsc/src/vec/is/is/examples/tutorials/output/ex5_1.out
/petsc/src/vec/is/is/impls/block/block.c
/petsc/src/vec/is/is/interface/ftn-custom/zindexf.c
/petsc/src/vec/is/utils/f90-custom/makefile
/petsc/src/vec/is/utils/f90-custom/zisltogf.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/is/utils/makefile
/petsc/src/vec/is/utils/pmap.c
/petsc/src/vec/vec/examples/tests/ex45.c
/petsc/src/vec/vec/examples/tests/makefile
/petsc/src/vec/vec/examples/tests/output/ex45_1.out
/petsc/src/vec/vec/examples/tutorials/ex8.c
/petsc/src/vec/vec/impls/mpi/pbvec.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/vinv.c
/petsc/src/vec/vec/utils/vpscat.c
/petsc/src/vec/vec/utils/vpscat.h
/petsc/src/vec/vec/utils/vscat.c
1f60f29504-Jun-2014 Satish Balay <balay@mcs.anl.gov>

configure: check ACML after MKL [as ACML can be found in system location]


/petsc/bin/maint/update-docs.py
config/packages/BlasLapack.py
/petsc/config/builder.py
/petsc/include/finclude/ftn-custom/petscdmda.h90
/petsc/include/petsc-private/dmdaimpl.h
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petsc-private/isimpl.h
/petsc/include/petsc-private/petscfeimpl.h
/petsc/include/petsc-private/vecimpl.h
/petsc/include/petscbag.h
/petsc/include/petscdm.h
/petsc/include/petscdmda.h
/petsc/include/petscfe.h
/petsc/include/petscis.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/include/petscsys.h
/petsc/include/petsctao.h
/petsc/include/petscvec.h
/petsc/src/benchmarks/streams/BasicVersion.c
/petsc/src/benchmarks/streams/MPIVersion.c
/petsc/src/benchmarks/streams/PthreadVersion.c
/petsc/src/benchmarks/streams/SSEVersion.c
/petsc/src/contrib/fun3d/comp/flow.c
/petsc/src/contrib/fun3d/comp/makefile
/petsc/src/contrib/fun3d/incomp/flow.c
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/examples/tests/ex11.c
/petsc/src/dm/examples/tests/ex20.c
/petsc/src/dm/examples/tests/ex4.c
/petsc/src/dm/examples/tests/ex6.c
/petsc/src/dm/examples/tests/makefile
/petsc/src/dm/examples/tests/output/ex11_1.out
/petsc/src/dm/examples/tests/output/ex11_2.out
/petsc/src/dm/examples/tests/output/ex11_3.out
/petsc/src/dm/impls/circuit/circuitcreate.c
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/composite/packm.c
/petsc/src/dm/impls/da/da1.c
/petsc/src/dm/impls/da/da2.c
/petsc/src/dm/impls/da/da3.c
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/da/dadestroy.c
/petsc/src/dm/impls/da/dadist.c
/petsc/src/dm/impls/da/dagtol.c
/petsc/src/dm/impls/da/daindex.c
/petsc/src/dm/impls/da/dainterp.c
/petsc/src/dm/impls/da/dascatter.c
/petsc/src/dm/impls/da/f90-custom/makefile
/petsc/src/dm/impls/da/fdda.c
/petsc/src/dm/impls/da/ftn-custom/makefile
/petsc/src/dm/impls/da/ftn-custom/zdagetscatterf.c
/petsc/src/dm/impls/da/hypre/mhyp.c
/petsc/src/dm/impls/moab/dmmoab.cxx
/petsc/src/dm/impls/patch/patchcreate.c
/petsc/src/dm/impls/plex/examples/tests/output/ex1_6.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_8.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_25.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_26.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_27.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_28.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_29.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_30.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_17.out
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/plex/plexdistribute.c
/petsc/src/dm/impls/plex/plexlabel.c
/petsc/src/dm/impls/redundant/dmredundant.c
/petsc/src/dm/impls/sliced/sliced.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmi.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/documentation/taosolvertable.html
/petsc/src/ksp/ksp/examples/tests/ex14.c
/petsc/src/ksp/ksp/examples/tests/ex19.c
/petsc/src/ksp/ksp/examples/tests/ex26.c
/petsc/src/ksp/ksp/examples/tests/ex29.c
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tests/output/ex14_1.out
/petsc/src/ksp/ksp/examples/tutorials/ex14f.F
/petsc/src/ksp/ksp/examples/tutorials/ex43.c
/petsc/src/ksp/ksp/examples/tutorials/ex49.c
/petsc/src/ksp/ksp/examples/tutorials/ex52.c
/petsc/src/ksp/ksp/examples/tutorials/ex59.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/interface/iterativ.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/utils/schurm.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/mat/examples/tests/ex139.c
/petsc/src/mat/examples/tests/ex159.c
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/baij/mpi/mmbaij.c
/petsc/src/mat/impls/is/matis.c
/petsc/src/mat/impls/localref/mlocalref.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tests/ex5.c
/petsc/src/snes/examples/tests/makefile
/petsc/src/snes/examples/tutorials/ex10d/ex10.c
/petsc/src/snes/examples/tutorials/ex48.c
/petsc/src/snes/examples/tutorials/ex5f.F
/petsc/src/snes/examples/tutorials/ex5f90.F
/petsc/src/snes/examples/tutorials/ex5f90t.F
/petsc/src/snes/interface/snes.c
/petsc/src/sys/classes/bag/bag.c
/petsc/src/sys/memory/mal.c
/petsc/src/sys/objects/pinit.c
/petsc/src/tao/bound/examples/tutorials/plate2f.F
/petsc/src/tao/bound/impls/blmvm/blmvm.c
/petsc/src/tao/bound/impls/blmvm/makefile
/petsc/src/tao/bound/impls/bqpip/bqpip.c
/petsc/src/tao/bound/impls/bqpip/makefile
/petsc/src/tao/bound/impls/gpcg/gpcg.c
/petsc/src/tao/bound/impls/gpcg/makefile
/petsc/src/tao/bound/impls/tron/makefile
/petsc/src/tao/bound/impls/tron/tron.c
/petsc/src/tao/bound/utils/isutil.c
/petsc/src/tao/complementarity/impls/asls/asfls.c
/petsc/src/tao/complementarity/impls/asls/asils.c
/petsc/src/tao/complementarity/impls/asls/makefile
/petsc/src/tao/complementarity/impls/ssls/makefile
/petsc/src/tao/complementarity/impls/ssls/ssfls.c
/petsc/src/tao/complementarity/impls/ssls/ssils.c
/petsc/src/tao/constrained/impls/ipm/ipm.c
/petsc/src/tao/constrained/impls/ipm/makefile
/petsc/src/tao/interface/makefile
/petsc/src/tao/interface/taosolver.c
/petsc/src/tao/leastsquares/examples/tutorials/output/chwirut1_1.out
/petsc/src/tao/leastsquares/impls/pounders/makefile
/petsc/src/tao/leastsquares/impls/pounders/pounders.c
/petsc/src/tao/pde_constrained/impls/lcl/lcl.c
/petsc/src/tao/pde_constrained/impls/lcl/makefile
/petsc/src/tao/unconstrained/examples/tutorials/eptorsion1.c
/petsc/src/tao/unconstrained/impls/bmrm/bmrm.c
/petsc/src/tao/unconstrained/impls/bmrm/makefile
/petsc/src/tao/unconstrained/impls/cg/makefile
/petsc/src/tao/unconstrained/impls/cg/taocg.c
/petsc/src/tao/unconstrained/impls/lmvm/lmvm.c
/petsc/src/tao/unconstrained/impls/lmvm/makefile
/petsc/src/tao/unconstrained/impls/neldermead/makefile
/petsc/src/tao/unconstrained/impls/neldermead/neldermead.c
/petsc/src/tao/unconstrained/impls/nls/makefile
/petsc/src/tao/unconstrained/impls/nls/nls.c
/petsc/src/tao/unconstrained/impls/ntl/makefile
/petsc/src/tao/unconstrained/impls/ntl/ntl.c
/petsc/src/tao/unconstrained/impls/ntr/makefile
/petsc/src/tao/unconstrained/impls/ntr/ntr.c
/petsc/src/tao/unconstrained/impls/owlqn/makefile
/petsc/src/tao/unconstrained/impls/owlqn/owlqn.c
/petsc/src/ts/examples/tutorials/ex30.cxx
/petsc/src/vec/is/is/examples/tests/ex5.c
/petsc/src/vec/is/is/examples/tutorials/ex4.c
/petsc/src/vec/is/is/examples/tutorials/ex5.c
/petsc/src/vec/is/is/examples/tutorials/makefile
/petsc/src/vec/is/is/examples/tutorials/output/ex4_1.out
/petsc/src/vec/is/is/examples/tutorials/output/ex5_1.out
/petsc/src/vec/is/is/impls/block/block.c
/petsc/src/vec/is/is/interface/ftn-custom/zindexf.c
/petsc/src/vec/is/utils/f90-custom/makefile
/petsc/src/vec/is/utils/f90-custom/zisltogf.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/is/utils/makefile
/petsc/src/vec/is/utils/pmap.c
/petsc/src/vec/vec/examples/tests/ex45.c
/petsc/src/vec/vec/examples/tests/makefile
/petsc/src/vec/vec/examples/tests/output/ex45_1.out
/petsc/src/vec/vec/examples/tutorials/ex8.c
/petsc/src/vec/vec/impls/mpi/pbvec.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/vinv.c
/petsc/src/vec/vec/utils/vpscat.c
/petsc/src/vec/vec/utils/vpscat.h
/petsc/src/vec/vec/utils/vscat.c
64abde3c30-May-2014 Satish Balay <balay@mcs.anl.gov>

configure: remove worksonWindows flag - as we don't know if users can
install a given external package by themselves
[eventhough its not supported on windows]


config/package.py
config/packages/BlasLapack.py
config/packages/MPI.py
config/packages/boost.py
config/packages/cusp.py
config/packages/f2cblaslapack.py
config/packages/fblaslapack.py
config/packages/fiat.py
config/packages/hdf5.py
config/packages/make.py
config/packages/scientificpython.py
config/packages/thrust.py
/petsc/config/PETSc/packages/Chaco.py
/petsc/config/PETSc/packages/Generator.py
/petsc/config/PETSc/packages/MUMPS.py
/petsc/config/PETSc/packages/SuperLU.py
/petsc/config/PETSc/packages/SuperLU_DIST.py
/petsc/config/PETSc/packages/X.py
/petsc/config/PETSc/packages/c2html.py
/petsc/config/PETSc/packages/clique.py
/petsc/config/PETSc/packages/cmake.py
/petsc/config/PETSc/packages/cuda.py
/petsc/config/PETSc/packages/elemental.py
/petsc/config/PETSc/packages/glut.py
/petsc/config/PETSc/packages/hwloc.py
/petsc/config/PETSc/packages/hypre.py
/petsc/config/PETSc/packages/metis.py
/petsc/config/PETSc/packages/ml.py
/petsc/config/PETSc/packages/opencl.py
/petsc/config/PETSc/packages/opengl.py
/petsc/config/PETSc/packages/openmp.py
/petsc/config/PETSc/packages/parmetis.py
/petsc/config/PETSc/packages/pcbddc.py
/petsc/config/PETSc/packages/pthread.py
/petsc/config/PETSc/packages/scalapack.py
/petsc/config/PETSc/packages/sowing.py
/petsc/config/PETSc/packages/ssl.py
/petsc/config/PETSc/packages/valgrind.py
/petsc/config/PETSc/packages/viennacl.py
/petsc/config/builder.py
/petsc/include/petsc-private/dmdaimpl.h
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petsc-private/isimpl.h
/petsc/include/petsc-private/petscfeimpl.h
/petsc/include/petscbag.h
/petsc/include/petscdm.h
/petsc/include/petscdmda.h
/petsc/include/petscfe.h
/petsc/include/petscis.h
/petsc/include/petscmat.h
/petsc/include/petscsys.h
/petsc/include/petscvec.h
/petsc/src/contrib/fun3d/comp/flow.c
/petsc/src/contrib/fun3d/comp/makefile
/petsc/src/contrib/fun3d/incomp/flow.c
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/examples/tests/ex11.c
/petsc/src/dm/examples/tests/ex20.c
/petsc/src/dm/examples/tests/makefile
/petsc/src/dm/examples/tests/output/ex11_1.out
/petsc/src/dm/examples/tests/output/ex11_2.out
/petsc/src/dm/examples/tests/output/ex11_3.out
/petsc/src/dm/impls/circuit/circuitcreate.c
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/composite/packm.c
/petsc/src/dm/impls/da/da1.c
/petsc/src/dm/impls/da/da2.c
/petsc/src/dm/impls/da/da3.c
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/da/dadestroy.c
/petsc/src/dm/impls/da/dadist.c
/petsc/src/dm/impls/da/dagtol.c
/petsc/src/dm/impls/da/daindex.c
/petsc/src/dm/impls/da/dainterp.c
/petsc/src/dm/impls/da/dascatter.c
/petsc/src/dm/impls/da/fdda.c
/petsc/src/dm/impls/da/ftn-custom/zdagetscatterf.c
/petsc/src/dm/impls/moab/dmmoab.cxx
/petsc/src/dm/impls/patch/patchcreate.c
/petsc/src/dm/impls/plex/examples/tests/output/ex1_6.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_8.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_25.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_26.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_27.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_28.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_29.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_30.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_17.out
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/redundant/dmredundant.c
/petsc/src/dm/impls/sliced/sliced.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmi.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/ksp/examples/tutorials/ex59.c
/petsc/src/ksp/ksp/interface/iterativ.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/mat/examples/tests/ex139.c
/petsc/src/mat/examples/tests/ex159.c
/petsc/src/mat/impls/baij/mpi/mmbaij.c
/petsc/src/mat/impls/localref/mlocalref.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tutorials/ex10d/ex10.c
/petsc/src/snes/examples/tutorials/ex48.c
/petsc/src/snes/interface/snes.c
/petsc/src/sys/classes/bag/bag.c
/petsc/src/sys/memory/mal.c
/petsc/src/ts/examples/tutorials/ex30.cxx
/petsc/src/vec/is/is/examples/tests/ex5.c
/petsc/src/vec/is/is/examples/tutorials/ex4.c
/petsc/src/vec/is/is/impls/block/block.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/is/utils/pmap.c
/petsc/src/vec/vec/examples/tutorials/ex8.c
/petsc/src/vec/vec/impls/mpi/pbvec.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/vpscat.c
/petsc/src/vec/vec/utils/vpscat.h
/petsc/src/vec/vec/utils/vscat.c
93c771e630-May-2014 Satish Balay <balay@mcs.anl.gov>

configure: check if the compiler returns zero error code on link failure


config/setCompilers.py
/petsc/config/builder.py
/petsc/include/petsc-private/dmdaimpl.h
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petsc-private/isimpl.h
/petsc/include/petsc-private/petscfeimpl.h
/petsc/include/petscbag.h
/petsc/include/petscdm.h
/petsc/include/petscdmda.h
/petsc/include/petscfe.h
/petsc/include/petscis.h
/petsc/include/petscmat.h
/petsc/include/petscsys.h
/petsc/include/petscvec.h
/petsc/src/contrib/fun3d/comp/flow.c
/petsc/src/contrib/fun3d/comp/makefile
/petsc/src/contrib/fun3d/incomp/flow.c
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/examples/tests/ex11.c
/petsc/src/dm/examples/tests/ex20.c
/petsc/src/dm/examples/tests/makefile
/petsc/src/dm/examples/tests/output/ex11_1.out
/petsc/src/dm/examples/tests/output/ex11_2.out
/petsc/src/dm/examples/tests/output/ex11_3.out
/petsc/src/dm/impls/circuit/circuitcreate.c
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/composite/packm.c
/petsc/src/dm/impls/da/da1.c
/petsc/src/dm/impls/da/da2.c
/petsc/src/dm/impls/da/da3.c
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/da/dadestroy.c
/petsc/src/dm/impls/da/dadist.c
/petsc/src/dm/impls/da/dagtol.c
/petsc/src/dm/impls/da/daindex.c
/petsc/src/dm/impls/da/dainterp.c
/petsc/src/dm/impls/da/dascatter.c
/petsc/src/dm/impls/da/fdda.c
/petsc/src/dm/impls/da/ftn-custom/zdagetscatterf.c
/petsc/src/dm/impls/moab/dmmoab.cxx
/petsc/src/dm/impls/patch/patchcreate.c
/petsc/src/dm/impls/plex/examples/tests/output/ex1_6.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_8.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_25.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_26.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_27.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_28.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_29.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_30.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_17.out
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/redundant/dmredundant.c
/petsc/src/dm/impls/sliced/sliced.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmi.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/ksp/examples/tutorials/ex59.c
/petsc/src/ksp/ksp/interface/iterativ.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/mat/examples/tests/ex139.c
/petsc/src/mat/examples/tests/ex159.c
/petsc/src/mat/impls/baij/mpi/mmbaij.c
/petsc/src/mat/impls/localref/mlocalref.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tutorials/ex10d/ex10.c
/petsc/src/snes/examples/tutorials/ex48.c
/petsc/src/snes/interface/snes.c
/petsc/src/sys/classes/bag/bag.c
/petsc/src/sys/memory/mal.c
/petsc/src/ts/examples/tutorials/ex30.cxx
/petsc/src/vec/is/is/examples/tests/ex5.c
/petsc/src/vec/is/is/examples/tutorials/ex4.c
/petsc/src/vec/is/is/impls/block/block.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/is/utils/pmap.c
/petsc/src/vec/vec/examples/tutorials/ex8.c
/petsc/src/vec/vec/impls/mpi/pbvec.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/vpscat.c
/petsc/src/vec/vec/utils/vpscat.h
/petsc/src/vec/vec/utils/vscat.c
5410928221-May-2014 Satish Balay <balay@mcs.anl.gov>

gfortran: remove 132 char limit from f90 free-form


/petsc/bin/maint/getpdflabels.py
/petsc/conf/rules
config/compilerOptions.py
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/packages/openmp.py
/petsc/config/PETSc/packages/pthreadclasses.py
/petsc/config/builder.py
/petsc/include/finclude/petscdmdef.h
/petsc/include/petsc-private/dmpleximpl.h
/petsc/include/petsc-private/petscfeimpl.h
/petsc/include/petsc-private/petscfvimpl.h
/petsc/include/petscdmplex.h
/petsc/include/petscdt.h
/petsc/include/petscfe.h
/petsc/include/petscfv.h
/petsc/include/petscfvtypes.h
/petsc/include/petscmat.h
/petsc/include/petscsnes.h
/petsc/include/petscsys.h
/petsc/include/petsctime.h
/petsc/include/petscts.h
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/dt/interface/dtfv.c
/petsc/src/dm/dt/interface/makefile
/petsc/src/dm/impls/da/da2.c
/petsc/src/dm/impls/da/daindex.c
/petsc/src/dm/impls/plex/examples/tests/ex3.c
/petsc/src/dm/impls/plex/examples/tests/output/ex3_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_15.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_18.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_25.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_26.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_27.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_28.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_29.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_3.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_30.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_6.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_9.out
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/plex/plexdistribute.c
/petsc/src/dm/impls/plex/plexfem.c
/petsc/src/dm/impls/plex/plexgmsh.c
/petsc/src/dm/impls/plex/plexlabel.c
/petsc/src/dm/impls/plex/plexpreallocate.c
/petsc/src/dm/impls/plex/plexrefine.c
/petsc/src/dm/impls/plex/plexsubmesh.c
/petsc/src/dm/impls/shell/ftn-custom/zdmshellf.c
/petsc/src/dm/interface/dlregisdmdm.c
/petsc/src/dm/interface/dmregall.c
/petsc/src/docs/tex/manual/developers.tex
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/website/developers/index.html
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/tutorials/index.html
/petsc/src/ksp/ksp/examples/tutorials/ex52.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex52_1.out
/petsc/src/ksp/ksp/impls/gmres/fgmres/ftn-custom/zmodpcff.c
/petsc/src/ksp/ksp/interface/ftn-custom/zitfuncf.c
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/mat/examples/tests/ex125.c
/petsc/src/mat/examples/tests/ex68.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex125_mumps.out
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/mpi/pastix/pastix.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/aijfact.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/baij/seq/baijfact.c
/petsc/src/mat/impls/baij/seq/baijfact3.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/elemental/matelem.cxx
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact2.c
/petsc/src/mat/interface/matnull.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/utils/gcreate.c
/petsc/src/snes/examples/tutorials/ex12.c
/petsc/src/snes/examples/tutorials/ex62.c
/petsc/src/snes/examples/tutorials/output/ex12_10.out
/petsc/src/snes/examples/tutorials/output/ex12_11.out
/petsc/src/snes/examples/tutorials/output/ex12_12.out
/petsc/src/snes/examples/tutorials/output/ex12_3.out
/petsc/src/snes/examples/tutorials/output/ex12_34.out
/petsc/src/snes/examples/tutorials/output/ex12_35.out
/petsc/src/snes/examples/tutorials/output/ex12_36.out
/petsc/src/snes/examples/tutorials/output/ex12_7.out
/petsc/src/snes/examples/tutorials/output/ex12_8.out
/petsc/src/snes/examples/tutorials/output/ex12_9.out
/petsc/src/snes/examples/tutorials/output/ex12_periodic_0.out
/petsc/src/snes/examples/tutorials/output/ex12_restart_0.out
/petsc/src/snes/examples/tutorials/output/ex12_restart_1.out
/petsc/src/snes/examples/tutorials/output/ex62_0.out
/petsc/src/snes/examples/tutorials/output/ex62_1.out
/petsc/src/snes/examples/tutorials/output/ex62_10.out
/petsc/src/snes/examples/tutorials/output/ex62_11.out
/petsc/src/snes/examples/tutorials/output/ex62_12.out
/petsc/src/snes/examples/tutorials/output/ex62_13.out
/petsc/src/snes/examples/tutorials/output/ex62_14.out
/petsc/src/snes/examples/tutorials/output/ex62_15.out
/petsc/src/snes/examples/tutorials/output/ex62_16.out
/petsc/src/snes/examples/tutorials/output/ex62_17.out
/petsc/src/snes/examples/tutorials/output/ex62_18.out
/petsc/src/snes/examples/tutorials/output/ex62_19.out
/petsc/src/snes/examples/tutorials/output/ex62_2.out
/petsc/src/snes/examples/tutorials/output/ex62_20.out
/petsc/src/snes/examples/tutorials/output/ex62_21.out
/petsc/src/snes/examples/tutorials/output/ex62_22.out
/petsc/src/snes/examples/tutorials/output/ex62_23.out
/petsc/src/snes/examples/tutorials/output/ex62_24.out
/petsc/src/snes/examples/tutorials/output/ex62_25.out
/petsc/src/snes/examples/tutorials/output/ex62_28.out
/petsc/src/snes/examples/tutorials/output/ex62_29.out
/petsc/src/snes/examples/tutorials/output/ex62_3.out
/petsc/src/snes/examples/tutorials/output/ex62_36.out
/petsc/src/snes/examples/tutorials/output/ex62_6.out
/petsc/src/snes/examples/tutorials/output/ex62_7.out
/petsc/src/snes/examples/tutorials/output/ex62_8.out
/petsc/src/snes/examples/tutorials/output/ex62_9.out
/petsc/src/snes/examples/tutorials/output/ex62_quad_q2p1_full.out
/petsc/src/snes/examples/tutorials/output/ex62_quad_q2q1_full.out
/petsc/src/snes/impls/composite/snescomposite.c
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/interface/ftn-custom/zsnesf.c
/petsc/src/snes/interface/noise/snesmfj2.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snespc.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/sys/objects/ftn-custom/makefile
/petsc/src/sys/objects/options.c
/petsc/src/sys/objects/pinit.c
/petsc/src/tao/examples/tutorials/ex1.c
/petsc/src/tao/pde_constrained/impls/lcl/lcl.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/output/ex11_7.out
/petsc/src/ts/examples/tutorials/output/ex11_8.out
/petsc/src/ts/examples/tutorials/output/ex11_9.out
/petsc/src/ts/utils/dmlocalts.c
/petsc/src/ts/utils/dmplexts.c
/petsc/src/ts/utils/makefile
/petsc/src/vec/is/is/utils/iscoloring.c
/petsc/src/vec/is/utils/vsectionis.c
55ae81b503-May-2014 Karl Rupp <rupp@iue.tuwien.ac.at>

Merge branch 'karlrupp/fix-sacusp-cusp-0.4.0'

* karlrupp/fix-sacusp-cusp-0.4.0:
Fixes issues with the smoothed aggregation preconditioner in CUSP
due to a change in the source file hierarchy fro

Merge branch 'karlrupp/fix-sacusp-cusp-0.4.0'

* karlrupp/fix-sacusp-cusp-0.4.0:
Fixes issues with the smoothed aggregation preconditioner in CUSP
due to a change in the source file hierarchy from 0.3.x to 0.4.0.

show more ...


/petsc/bin/pythonscripts/petsc_gen_xdmf.py
config/packages/cusp.py
/petsc/include/petsc-private/dmpleximpl.h
/petsc/include/petsc-private/isimpl.h
/petsc/include/petscdmplex.h
/petsc/include/petscis.h
/petsc/include/petscviewerhdf5.h
/petsc/src/dm/impls/plex/makefile
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexdistribute.c
/petsc/src/dm/impls/plex/plexhdf5.c
/petsc/src/ksp/pc/impls/sacusp/sacusp.cu
/petsc/src/ksp/pc/impls/sacusp/sacusppoly.cu
/petsc/src/mat/examples/tests/ex78.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/impls/test/snestest.c
/petsc/src/sys/objects/ftn-custom/zoptionsf.c
/petsc/src/sys/objects/options.c
/petsc/src/vec/is/is/impls/block/block.c
/petsc/src/vec/is/is/impls/general/general.c
/petsc/src/vec/is/is/impls/stride/stride.c
/petsc/src/vec/is/is/interface/index.c
/petsc/src/vec/is/utils/isio.c
/petsc/src/vec/vec/utils/vecio.c
/petsc/systems/Apple/OSX/bin/arch-osx-debug.py
/petsc/systems/Apple/OSX/bin/makeall
022787cb29-Apr-2014 Matthew G. Knepley <knepley@gmail.com>

Config: Allow plain string for -with-search-dirs


/petsc/bin/maint/confignightly/churn2
/petsc/conf/test
config/base.py
/petsc/config/PETSc/packages/metis.py
/petsc/config/PETSc/packages/parmetis.py
/petsc/config/examples/arch-linux-cxx-cmplx-pkgs-64idx.py
/petsc/include/petscdm.h
/petsc/include/petscksp.h
/petsc/include/petscsnes.h
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/ksp/examples/tests/ex14.c
/petsc/src/ksp/ksp/interface/eige.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/mat/examples/tests/ex72.c
/petsc/src/mat/examples/tests/output/ex152_1.out
/petsc/src/mat/examples/tests/output/ex152_2.out
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/order/wbm.c
/petsc/src/snes/impls/nasm/aspin.c
/petsc/src/snes/impls/nasm/nasm.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/tao/leastsquares/examples/tutorials/chwirut2.c
/petsc/src/tao/leastsquares/examples/tutorials/chwirut2f.F
/petsc/src/ts/examples/tests/ex3.c
802a8dd122-Apr-2014 Karl Rupp <rupp@iue.tuwien.ac.at>

sacusp: Fixed includes to correctly deal with Cusp 0.4.0.

The relevant source file has been moved from
cusp/precond/smoothed_aggregation.h
to
cusp/precond/aggregation/smoothed_aggregation.h
in Cus

sacusp: Fixed includes to correctly deal with Cusp 0.4.0.

The relevant source file has been moved from
cusp/precond/smoothed_aggregation.h
to
cusp/precond/aggregation/smoothed_aggregation.h
in Cusp 0.4.0. The preconditioner class moved from namespace
cusp::precond::smoothed_aggregation
to
cusp::precond::aggregation::smoothed_aggregation
Since this only affects two .cu files (plus BuildSystem), I refrained
from introducing a separate header file.

show more ...


/petsc/bin/maint/confignightly/churn2
config/packages/cusp.py
/petsc/config/examples/arch-linux-cxx-cmplx-pkgs-64idx.py
/petsc/src/docs/tex/petsc.bib
/petsc/src/ksp/pc/impls/sacusp/sacusp.cu
/petsc/src/ksp/pc/impls/sacusp/sacusppoly.cu
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
effad6e021-Apr-2014 Satish Balay <balay@mcs.anl.gov>

osx-pgi: add in a testcase and add a workarround in check*Libraries for: -rpath 'foo bar'


/petsc/bin/maint/confignightly/petsc-mini4
/petsc/bin/maint/generatefortranstubs.py
config/compilers.py
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/packages/sowing.py
/petsc/config/builder.py
/petsc/config/examples/arch-osx-pgi-pkgs-opt.py
/petsc/include/finclude/petscmatdef.h
/petsc/include/mpiuni/mpi.h
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petsc-private/dmpleximpl.h
/petsc/include/petsc-private/fortranimpl.h
/petsc/include/petsc-private/matimpl.h
/petsc/include/petsc-private/petscfeimpl.h
/petsc/include/petscdm.h
/petsc/include/petscdmplex.h
/petsc/include/petscfe.h
/petsc/include/petscmat.h
/petsc/include/petsctao.h
/petsc/include/petsctime.h
/petsc/include/petscversion.h
/petsc/src/benchmarks/benchmarkExample.py
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/impls/plex/examples/tests/output/ex1_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_12.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_2.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_3.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_4.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_5.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_6.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_7.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_8.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_9.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_10.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_11.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_12.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_13.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_14.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_15.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_16.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_17.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_18.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_19.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_2.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_20.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_21.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_22.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_23.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_24.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_25.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_26.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_27.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_28.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_3.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_4.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_5.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_6.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_7.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_8.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_9.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_10.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_11.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_12.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_2.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_3.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_4.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_5.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_6.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_7.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_8.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_9.out
/petsc/src/dm/impls/plex/examples/tests/output/ex7_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex7_1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex7_10.out
/petsc/src/dm/impls/plex/examples/tests/output/ex7_11.out
/petsc/src/dm/impls/plex/examples/tests/output/ex7_2.out
/petsc/src/dm/impls/plex/examples/tests/output/ex7_3.out
/petsc/src/dm/impls/plex/examples/tests/output/ex7_4.out
/petsc/src/dm/impls/plex/examples/tests/output/ex7_5.out
/petsc/src/dm/impls/plex/examples/tests/output/ex7_6.out
/petsc/src/dm/impls/plex/examples/tests/output/ex7_7.out
/petsc/src/dm/impls/plex/examples/tests/output/ex7_8.out
/petsc/src/dm/impls/plex/examples/tests/output/ex7_9.out
/petsc/src/dm/impls/plex/examples/tests/output/ex8_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex8_1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex8_4.out
/petsc/src/dm/impls/plex/examples/tests/output/ex8_5.out
/petsc/src/dm/impls/plex/examples/tutorials/output/ex1_0.out
/petsc/src/dm/impls/plex/examples/tutorials/output/ex1_1.out
/petsc/src/dm/impls/plex/examples/tutorials/output/ex1f90_0.out
/petsc/src/dm/impls/plex/examples/tutorials/output/ex1f90_1.out
/petsc/src/dm/impls/plex/examples/tutorials/output/ex3f90_0.out
/petsc/src/dm/impls/plex/f90-custom/zplexf90.c
/petsc/src/dm/impls/plex/ftn-custom/makefile
/petsc/src/dm/impls/plex/ftn-custom/zplexinterpolate.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/plex/plexdistribute.c
/petsc/src/dm/impls/plex/plexfem.c
/petsc/src/dm/impls/plex/plexgeometry.c
/petsc/src/dm/impls/plex/plexinterpolate.c
/petsc/src/dm/impls/plex/plexrefine.c
/petsc/src/dm/impls/plex/plexsubmesh.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tao_tex/manual/part2.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/documentation/saws.html
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/mat/color/impls/greedy/greedy.c
/petsc/src/mat/color/impls/jp/jp.c
/petsc/src/mat/color/impls/makefile
/petsc/src/mat/color/interface/ftn-custom/zmatcoloringf.c
/petsc/src/mat/color/interface/matcoloring.c
/petsc/src/mat/color/interface/matcoloringregi.c
/petsc/src/mat/color/utils/makefile
/petsc/src/mat/color/utils/weights.c
/petsc/src/mat/examples/tests/ex125.c
/petsc/src/mat/examples/tests/ex15.c
/petsc/src/mat/examples/tests/ex30.c
/petsc/src/mat/examples/tests/ex68.c
/petsc/src/mat/examples/tests/ex7.c
/petsc/src/mat/examples/tests/output/ex15_1.out
/petsc/src/mat/examples/tests/output/ex30_1.out
/petsc/src/mat/examples/tests/output/ex30_2.out
/petsc/src/mat/examples/tests/output/ex68_1.out
/petsc/src/mat/examples/tests/output/ex7_1.out
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/blockmat/seq/blockmat.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tutorials/ex12.c
/petsc/src/snes/examples/tutorials/ex16.c
/petsc/src/snes/examples/tutorials/ex31.c
/petsc/src/snes/examples/tutorials/ex62.c
/petsc/src/snes/examples/tutorials/ex67.c
/petsc/src/snes/examples/tutorials/ex72.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex12_39.out
/petsc/src/snes/examples/tutorials/output/ex12_41.out
/petsc/src/snes/examples/tutorials/output/ex12_42.out
/petsc/src/snes/examples/tutorials/output/ex19_greedy_coloring.out
/petsc/src/snes/examples/tutorials/output/ex62_26.out
/petsc/src/snes/examples/tutorials/output/ex62_27.out
/petsc/src/snes/examples/tutorials/output/ex62_28.out
/petsc/src/snes/examples/tutorials/output/ex62_29.out
/petsc/src/snes/examples/tutorials/output/ex62_30.out
/petsc/src/snes/examples/tutorials/output/ex62_31.out
/petsc/src/snes/examples/tutorials/output/ex62_32.out
/petsc/src/snes/examples/tutorials/output/ex62_33.out
/petsc/src/snes/examples/tutorials/output/ex62_34.out
/petsc/src/snes/examples/tutorials/output/ex62_35.out
/petsc/src/snes/impls/test/snestest.c
/petsc/src/sys/classes/draw/interface/dline.c
/petsc/src/sys/error/err.c
/petsc/src/sys/error/errtrace.c
/petsc/src/sys/mpiuni/makefile
/petsc/src/sys/mpiuni/mpitime.c
/petsc/src/sys/objects/aoptions.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/time/ftn-custom/zptimef.c
/petsc/src/sys/time/makefile
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/interface/ts.c
ea11756309-Apr-2014 Satish Balay <balay@mcs.anl.gov>

configure: ignore AR, MAKEFLAGS [if set in env]


/petsc/bin/maint/confignightly/crank2
/petsc/bin/maint/confignightly/imav
/petsc/bin/maint/confignightly/petsc-mini
/petsc/bin/maint/confignightly/petsc-mini2
/petsc/bin/maint/confignightly/petsc-mini3
config/setCompilers.py
/petsc/config/examples/arch-linux-gcc-ifc-cmplx.py
/petsc/src/benchmarks/sizeof.c
/petsc/src/benchmarks/streams/MPIVersion.c
/petsc/src/benchmarks/streams/makefile
/petsc/src/benchmarks/streams/process.py
/petsc/src/contrib/nightlysummary/runhtml.sh
/petsc/src/ksp/ksp/examples/tests/ex14.c
/petsc/src/ksp/ksp/examples/tutorials/ex42.c
/petsc/src/snes/examples/tutorials/ex16.c
/petsc/src/snes/examples/tutorials/ex4.c
/petsc/src/snes/examples/tutorials/ex70.c
808f760207-Apr-2014 Barry Smith <bsmith@mcs.anl.gov>

barry is an idiot who doesn't have a clue as to what he is doing (and git's unfriendlyness doesn't help matters)


config/compilerFlags.py
/petsc/include/finclude/petscmat.h
/petsc/include/petsclog.h
/petsc/include/petscmat.h
/petsc/src/benchmarks/streams/MPIVersion.c
/petsc/src/contrib/nightlysummary/runhtml.sh
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/examples/tests/makefile
/petsc/src/dm/examples/tests/output/ex16_1.out
/petsc/src/dm/examples/tests/output/ex16_2.out
/petsc/src/dm/examples/tests/output/ex1_1.out
/petsc/src/dm/examples/tests/output/ex24_1.out
/petsc/src/dm/examples/tests/output/ex24_2.out
/petsc/src/dm/examples/tests/output/ex25_1.out
/petsc/src/dm/examples/tests/output/ex25_2.out
/petsc/src/dm/examples/tests/output/ex2_1.out
/petsc/src/dm/examples/tests/output/ex30_1.out
/petsc/src/dm/examples/tests/output/ex30_2.out
/petsc/src/dm/examples/tests/output/ex30_3.out
/petsc/src/dm/examples/tests/output/ex34_1.out
/petsc/src/dm/examples/tests/output/ex4_1.out
/petsc/src/dm/examples/tutorials/output/ex3_1.out
/petsc/src/dm/examples/tutorials/output/ex3_2.out
/petsc/src/dm/examples/tutorials/output/ex3_3.out
/petsc/src/dm/impls/plex/examples/tests/output/ex2f90_0.out
/petsc/src/dm/interface/dm.c
/petsc/src/ksp/ksp/examples/tests/ex35.c
/petsc/src/ksp/ksp/examples/tests/output/ex11_1.out
/petsc/src/ksp/ksp/examples/tests/output/ex11_2.out
/petsc/src/ksp/ksp/examples/tests/output/ex22_2.out
/petsc/src/ksp/ksp/examples/tests/output/ex35_1.out
/petsc/src/ksp/ksp/examples/tests/output/ex35_2.out
/petsc/src/ksp/ksp/examples/tutorials/ex54.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_seqcrl.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_seqcsrperm.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex43_3.out
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/coarsen/coarsen.c
/petsc/src/mat/examples/tests/ex136.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex114_2.out
/petsc/src/mat/examples/tests/output/ex114_3.out
/petsc/src/mat/examples/tests/output/ex134_1.out
/petsc/src/mat/examples/tests/output/ex136_1.out
/petsc/src/mat/examples/tests/output/ex136_2.out
/petsc/src/mat/examples/tests/output/ex136_3.out
/petsc/src/mat/examples/tests/output/ex136_4.out
/petsc/src/mat/examples/tests/output/ex136_5.out
/petsc/src/mat/examples/tests/output/ex136_6.out
/petsc/src/mat/examples/tests/output/ex137_1.out
/petsc/src/mat/examples/tests/output/ex139_1.out
/petsc/src/mat/examples/tests/output/ex13_1.out
/petsc/src/mat/examples/tests/output/ex151_1.out
/petsc/src/mat/examples/tests/output/ex151_2.out
/petsc/src/mat/examples/tests/output/ex151_2b.out
/petsc/src/mat/examples/tests/output/ex151_3.out
/petsc/src/mat/examples/tests/output/ex151_3b.out
/petsc/src/mat/examples/tests/output/ex159_1.out
/petsc/src/mat/examples/tests/output/ex159_nest.out
/petsc/src/mat/examples/tests/output/ex15_1.out
/petsc/src/mat/examples/tests/output/ex16_1.out
/petsc/src/mat/examples/tests/output/ex16f90_1.out
/petsc/src/mat/examples/tests/output/ex17_1.out
/petsc/src/mat/examples/tests/output/ex18_1.out
/petsc/src/mat/examples/tests/output/ex18_10.out
/petsc/src/mat/examples/tests/output/ex18_11.out
/petsc/src/mat/examples/tests/output/ex18_13.out
/petsc/src/mat/examples/tests/output/ex18_14.out
/petsc/src/mat/examples/tests/output/ex18_2.out
/petsc/src/mat/examples/tests/output/ex18_4.out
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/petsc/src/mat/examples/tests/output/ex18_7.out
/petsc/src/mat/examples/tests/output/ex18_8.out
/petsc/src/mat/examples/tests/output/ex22_1.out
/petsc/src/mat/examples/tests/output/ex52_1.out
/petsc/src/mat/examples/tests/output/ex52_2.out
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/petsc/src/mat/examples/tests/output/ex52_4.out
/petsc/src/mat/examples/tests/output/ex59_2.out
/petsc/src/mat/examples/tests/output/ex59_3.out
/petsc/src/mat/examples/tests/output/ex5_21.out
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/petsc/src/mat/examples/tests/output/ex5_32.out
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/petsc/src/mat/examples/tests/output/ex5_34.out
/petsc/src/mat/examples/tests/output/ex60_1.out
/petsc/src/mat/examples/tests/output/ex63_1.out
/petsc/src/mat/examples/tests/output/ex68_1.out
/petsc/src/mat/examples/tests/output/ex6_1.out
/petsc/src/mat/examples/tests/output/ex79f_1.out
/petsc/src/mat/examples/tests/output/ex7_1.out
/petsc/src/mat/examples/tests/output/ex93_2.out
/petsc/src/mat/examples/tests/output/ex98.out
/petsc/src/mat/examples/tests/output/ex9_2.out
/petsc/src/mat/examples/tests/output/ex9_3.out
/petsc/src/mat/examples/tutorials/output/ex15_2.out
/petsc/src/mat/impls/aij/mpi/clique/clique.cxx
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/elemental/matelem.cxx
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/order/sorder.c
/petsc/src/snes/examples/tutorials/ex3.c
/petsc/src/snes/examples/tutorials/ex42.c
/petsc/src/snes/examples/tutorials/ex48.c
/petsc/src/snes/examples/tutorials/output/ex19_10.out
/petsc/src/snes/examples/tutorials/output/ex19_6.out
/petsc/src/snes/examples/tutorials/output/ex19_7.out
/petsc/src/snes/examples/tutorials/output/ex19_8.out
/petsc/src/snes/examples/tutorials/output/ex19_9.out
/petsc/src/snes/examples/tutorials/output/ex1_2_sol.out
/petsc/src/snes/examples/tutorials/output/ex5_4.out
/petsc/src/sys/classes/draw/interface/drawreg.c
/petsc/src/sys/classes/draw/utils/hists.c
/petsc/src/sys/classes/draw/utils/lgc.c
/petsc/src/sys/classes/random/interface/randomc.c
/petsc/src/sys/classes/viewer/interface/view.c
/petsc/src/sys/error/errtrace.c
/petsc/src/sys/examples/tests/output/ex1_1.out
/petsc/src/sys/objects/pname.c
/petsc/src/vec/is/ao/examples/tests/output/ex1_1.out
/petsc/src/vec/is/ao/examples/tests/output/ex1_2.out
/petsc/src/vec/is/ao/examples/tests/output/ex1_3.out
/petsc/src/vec/is/ao/examples/tests/output/ex2_1.out
/petsc/src/vec/is/ao/examples/tests/output/ex2_2.out
/petsc/src/vec/is/ao/examples/tests/output/ex2_3.out
/petsc/src/vec/is/ao/examples/tests/output/ex7_1.out
/petsc/src/vec/is/ao/interface/ao.c
/petsc/src/vec/is/is/examples/tests/output/ex6_3.out
/petsc/src/vec/is/is/examples/tutorials/output/ex1.out
/petsc/src/vec/is/is/examples/tutorials/output/ex1f.out
/petsc/src/vec/is/is/examples/tutorials/output/ex1f90.out
/petsc/src/vec/is/is/examples/tutorials/output/ex2.out
/petsc/src/vec/is/is/examples/tutorials/output/ex2f.out
/petsc/src/vec/is/is/examples/tutorials/output/ex3.out
/petsc/src/vec/is/is/examples/tutorials/output/ex3f90.out
/petsc/src/vec/is/is/interface/index.c
/petsc/src/vec/is/is/utils/iscoloring.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/is/utils/vsectionis.c
/petsc/src/vec/vec/examples/tests/makefile
/petsc/src/vec/vec/examples/tests/output/ex37_1.out
/petsc/src/vec/vec/examples/tests/output/ex37_2.out
/petsc/src/vec/vec/examples/tests/output/ex37_3.out
/petsc/src/vec/vec/examples/tests/output/ex37_4.out
/petsc/src/vec/vec/examples/tests/output/ex38_1.out
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/impls/nest/vecnest.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/interface/vector.c
45e40e4707-Apr-2014 Barry Smith <bsmith@mcs.anl.gov>

added gcc progma for ignoring deprecated SSL


/petsc/bin/maint/confignightly/imav
config/compilerFlags.py
/petsc/config/PETSc/utilities/libraryOptions.py
/petsc/config/examples/arch-osx-cxx-cmplx-pkgs-64idx.py
/petsc/include/petscdmplex.h
/petsc/include/petscsys.h
/petsc/include/petscts.h
/petsc/share/petsc/datafiles/meshes/doublet-tet.msh
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexfem.c
/petsc/src/dm/impls/plex/plexsubmesh.c
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/snes/examples/tutorials/ex12.c
/petsc/src/snes/examples/tutorials/output/ex12_10.out
/petsc/src/snes/examples/tutorials/output/ex12_12.out
/petsc/src/snes/examples/tutorials/output/ex12_3.out
/petsc/src/snes/examples/tutorials/output/ex12_43.out
/petsc/src/snes/examples/tutorials/output/ex12_44.out
/petsc/src/snes/examples/tutorials/output/ex12_7.out
/petsc/src/snes/examples/tutorials/output/ex62_38.out
/petsc/src/snes/examples/tutorials/output/ex62_39.out
/petsc/src/snes/examples/tutorials/output/ex62_40.out
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/webclient/box.c
/petsc/src/sys/webclient/client.c
/petsc/src/sys/webclient/globus.c
/petsc/src/sys/webclient/google.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/utils/dmlocalts.c
/petsc/src/ts/utils/makefile
f897e38602-Apr-2014 Jed Brown <jed@jedbrown.org>

config: fix isIBM compiler test


config/setCompilers.py
/petsc/config/PETSc/packages/hypre.py
/petsc/config/PETSc/packages/openmp.py
/petsc/include/petscfe.h
/petsc/include/petscmath.h
/petsc/src/ksp/ksp/examples/tutorials/ex10.c
009e9cf502-Apr-2014 Jed Brown <jed@jedbrown.org>

Merge branch 'jed/lib-remove-dups'

* jed/lib-remove-dups:
config libraries.toStringNoDups: remove duplicate entries appearing in sequence


config/libraries.py
/petsc/src/vec/is/sf/interface/dlregissf.c
7dab7c1a02-Apr-2014 Jed Brown <jed@jedbrown.org>

Merge branch 'jed/sf-contig-op'

* jed/sf-contig-op:
SF: guard MPI_COMBINER_DUP
SF: add arithmetic op types for contiguous types


config/packages/MPI.py
/petsc/config/PETSc/packages/fftw.py
/petsc/config/PETSc/utilities/sharedLibraries.py
/petsc/config/install.py
/petsc/gmakefile
/petsc/include/petsc-private/matimpl.h
/petsc/include/petsc-private/sfimpl.h
/petsc/include/petscmat.h
/petsc/include/petscmath.h
/petsc/makefile
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexrefine.c
/petsc/src/dm/interface/dmi.c
/petsc/src/docs/website/developers/index.html
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/impls/cg/gltr/gltr.c
/petsc/src/ksp/ksp/impls/cg/nash/nash.c
/petsc/src/ksp/ksp/impls/cg/stcg/stcg.c
/petsc/src/ksp/ksp/impls/cheby/cheby.c
/petsc/src/ksp/ksp/impls/cheby/chebyshevimpl.h
/petsc/src/ksp/ksp/impls/gmres/agmres/agmres.c
/petsc/src/ksp/ksp/impls/gmres/agmres/agmresorthog.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/interface/xmon.c
/petsc/src/ksp/pc/impls/gamg/classical.c
/petsc/src/ksp/pc/impls/tfs/xxt.c
/petsc/src/ksp/pc/impls/tfs/xyt.c
/petsc/src/mat/coarsen/impls/mis/mis.c
/petsc/src/mat/color/impls/greedy/greedy.c
/petsc/src/mat/color/impls/greedy/makefile
/petsc/src/mat/color/impls/makefile
/petsc/src/mat/color/interface/matcoloring.c
/petsc/src/mat/color/interface/matcoloringregi.c
/petsc/src/mat/color/utils/valid.c
/petsc/src/mat/examples/tests/ex112.c
/petsc/src/mat/examples/tests/ex142.c
/petsc/src/mat/examples/tests/ex143.c
/petsc/src/mat/examples/tests/ex144.c
/petsc/src/mat/examples/tests/ex146.c
/petsc/src/mat/examples/tests/ex147.c
/petsc/src/mat/examples/tests/ex148.c
/petsc/src/mat/examples/tests/ex153.c
/petsc/src/mat/examples/tests/ex155.c
/petsc/src/mat/examples/tests/ex157.c
/petsc/src/mat/examples/tests/ex158.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex142.out
/petsc/src/mat/examples/tests/output/ex148.out
/petsc/src/mat/examples/tests/output/ex158.out
/petsc/src/mat/examples/tests/output/ex158_2.out
/petsc/src/mat/impls/aij/seq/umfpack/umfpack.c
/petsc/src/mat/impls/fft/fftw/fftw.c
/petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/partition/impls/scotch/scotch.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/utils/dmdasnes.c
/petsc/src/sys/classes/draw/impls/win32/win32draw.c
/petsc/src/sys/classes/draw/utils/axis.c
/petsc/src/sys/classes/draw/utils/hue.c
/petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c
/petsc/src/sys/examples/tests/ex25.c
/petsc/src/sys/examples/tests/makefile
/petsc/src/sys/examples/tests/output/ex25.out
/petsc/src/sys/objects/aoptions.c
/petsc/src/tao/leastsquares/impls/pounders/pounders.c
/petsc/src/tao/linesearch/impls/morethuente/morethuente.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/utils/dmdats.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
/petsc/src/vec/is/sf/impls/window/sfwindow.c
/petsc/src/vec/is/sf/interface/sftype.c
/petsc/src/vec/vec/interface/rvector.c
b028818630-Mar-2014 Matthew G. Knepley <knepley@gmail.com>

Merge branch 'knepley/feature-plex-hdf5'

* knepley/feature-plex-hdf5: (63 commits)
DMPlex ex2: Added an example that checks a mesh
DMPlex: #ifdef support functions for HDF5
TS: Fix output sequ

Merge branch 'knepley/feature-plex-hdf5'

* knepley/feature-plex-hdf5: (63 commits)
DMPlex ex2: Added an example that checks a mesh
DMPlex: #ifdef support functions for HDF5
TS: Fix output sequence
DMPlex: Check for HDF5 attributes before writing them
DMPlex: Label with timestep number since we do not have times
Viewer+HDF5: Added PetscViewerHDF5HasAttribute()
TS: Set output sequence for timesteps
DMPlex: Handle output sequences - Added static to some functions
DM: Add idea of an output sequence - Added DMGet/SetOutputSequenceNumber() - Added doc for outputDM
REVERT TS: Timestep gets set into DMTS
DMPlex: Fix up HDF5 segregation
DMPlex: Replace MAXPATHLEN with PETSC_MAX_PATH_LEN
DMPlex: Fix HDF5 timestep handling
DMPlex: Set correct block size on HDF5 field vectors
TS: Timestep gets set into DMTS
DMTS: Added timestep
DMPlex: Fix output of fields - Corrected name - Fixed vector type
DMPlex: Return errors from HDF5 function
DMPlex+Viewer: Now output separate fields for viz - Added the PETSC_VIEWER_HDF5_VIZ format for creating viz fields - Added field type determination
Sys+HDF5: Added PetscDataType string and HDF5 support for it
...

Conflicts:
config/BuildSystem/config/packages/__init__.py
src/ts/interface/ts.c

show more ...


/petsc/conf/test
config/packages/__init__.py
config/packages/cgns.py
/petsc/config/PETSc/packages/ssl.py
/petsc/config/builder.py
/petsc/include/finclude/ftn-custom/petscdmplex.h90
/petsc/include/mpiuni/mpi.h
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petsc-private/dmpleximpl.h
/petsc/include/petsc-private/isimpl.h
/petsc/include/petsc-private/petscfeimpl.h
/petsc/include/petsc-private/tsimpl.h
/petsc/include/petscdm.h
/petsc/include/petscdmplex.h
/petsc/include/petscerror.h
/petsc/include/petscfe.h
/petsc/include/petscis.h
/petsc/include/petscmath.h
/petsc/include/petscsys.h
/petsc/include/petscts.h
/petsc/include/petscviewer.h
/petsc/include/petscviewerhdf5.h
/petsc/include/petscwebclient.h
/petsc/makefile
/petsc/src/benchmarks/streams/BasicVersion.c
/petsc/src/benchmarks/streams/MPIVersion.c
/petsc/src/benchmarks/streams/PthreadVersion.c
/petsc/src/benchmarks/streams/makefile
/petsc/src/benchmarks/streams/process.py
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/impls/plex/examples/tests/ex1.c
/petsc/src/dm/impls/plex/examples/tests/ex10.c
/petsc/src/dm/impls/plex/examples/tests/ex4.c
/petsc/src/dm/impls/plex/examples/tests/ex5.c
/petsc/src/dm/impls/plex/examples/tests/ex7.c
/petsc/src/dm/impls/plex/examples/tests/ex8.c
/petsc/src/dm/impls/plex/examples/tests/ex9.c
/petsc/src/dm/impls/plex/examples/tutorials/ex1.c
/petsc/src/dm/impls/plex/examples/tutorials/ex1f90.F
/petsc/src/dm/impls/plex/examples/tutorials/ex2.c
/petsc/src/dm/impls/plex/examples/tutorials/ex3f90.F
/petsc/src/dm/impls/plex/examples/tutorials/output/ex3f90_0.out
/petsc/src/dm/impls/plex/f90-custom/zplexf90.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexcgns.c
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/plex/plexdistribute.c
/petsc/src/dm/impls/plex/plexexodusii.c
/petsc/src/dm/impls/plex/plexfem.c
/petsc/src/dm/impls/plex/plexgmsh.c
/petsc/src/dm/impls/plex/plexinterpolate.c
/petsc/src/dm/impls/plex/plexlabel.c
/petsc/src/dm/impls/plex/plexpartition.c
/petsc/src/dm/impls/plex/plexpoint.c
/petsc/src/dm/impls/plex/plexrefine.c
/petsc/src/dm/impls/plex/plexsubmesh.c
/petsc/src/dm/impls/shell/dmshell.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/documentation/tutorials/index.html
/petsc/src/ksp/ksp/examples/tutorials/ex3.c
/petsc/src/ksp/ksp/impls/cg/stcg/stcg.c
/petsc/src/ksp/ksp/interface/iterativ.c
/petsc/src/mat/examples/tutorials/ex11.c
/petsc/src/snes/examples/tutorials/ex12.c
/petsc/src/snes/examples/tutorials/ex16.c
/petsc/src/snes/examples/tutorials/ex52.c
/petsc/src/snes/examples/tutorials/ex62.c
/petsc/src/snes/examples/tutorials/ex70.c
/petsc/src/snes/examples/tutorials/ex72.c
/petsc/src/snes/examples/tutorials/output/ex12_0.out
/petsc/src/snes/examples/tutorials/output/ex12_1.out
/petsc/src/snes/examples/tutorials/output/ex12_10.out
/petsc/src/snes/examples/tutorials/output/ex12_11.out
/petsc/src/snes/examples/tutorials/output/ex12_12.out
/petsc/src/snes/examples/tutorials/output/ex12_13.out
/petsc/src/snes/examples/tutorials/output/ex12_14.out
/petsc/src/snes/examples/tutorials/output/ex12_15.out
/petsc/src/snes/examples/tutorials/output/ex12_16.out
/petsc/src/snes/examples/tutorials/output/ex12_17.out
/petsc/src/snes/examples/tutorials/output/ex12_18.out
/petsc/src/snes/examples/tutorials/output/ex12_19.out
/petsc/src/snes/examples/tutorials/output/ex12_2.out
/petsc/src/snes/examples/tutorials/output/ex12_20.out
/petsc/src/snes/examples/tutorials/output/ex12_21.out
/petsc/src/snes/examples/tutorials/output/ex12_22.out
/petsc/src/snes/examples/tutorials/output/ex12_23.out
/petsc/src/snes/examples/tutorials/output/ex12_24.out
/petsc/src/snes/examples/tutorials/output/ex12_25.out
/petsc/src/snes/examples/tutorials/output/ex12_26.out
/petsc/src/snes/examples/tutorials/output/ex12_27.out
/petsc/src/snes/examples/tutorials/output/ex12_28.out
/petsc/src/snes/examples/tutorials/output/ex12_29.out
/petsc/src/snes/examples/tutorials/output/ex12_3.out
/petsc/src/snes/examples/tutorials/output/ex12_30.out
/petsc/src/snes/examples/tutorials/output/ex12_31.out
/petsc/src/snes/examples/tutorials/output/ex12_32.out
/petsc/src/snes/examples/tutorials/output/ex12_33.out
/petsc/src/snes/examples/tutorials/output/ex12_34.out
/petsc/src/snes/examples/tutorials/output/ex12_35.out
/petsc/src/snes/examples/tutorials/output/ex12_36.out
/petsc/src/snes/examples/tutorials/output/ex12_39.out
/petsc/src/snes/examples/tutorials/output/ex12_4.out
/petsc/src/snes/examples/tutorials/output/ex12_40.out
/petsc/src/snes/examples/tutorials/output/ex12_41.out
/petsc/src/snes/examples/tutorials/output/ex12_42.out
/petsc/src/snes/examples/tutorials/output/ex12_5.out
/petsc/src/snes/examples/tutorials/output/ex12_6.out
/petsc/src/snes/examples/tutorials/output/ex12_7.out
/petsc/src/snes/examples/tutorials/output/ex12_8.out
/petsc/src/snes/examples/tutorials/output/ex12_9.out
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/interface/snes.c
/petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c
/petsc/src/sys/classes/viewer/impls/socket/send.c
/petsc/src/sys/classes/viewer/interface/viewreg.c
/petsc/src/sys/fileio/sysio.c
/petsc/src/sys/makefile
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/webclient/box.c
/petsc/src/sys/webclient/client.c
/petsc/src/sys/webclient/examples/makefile
/petsc/src/sys/webclient/examples/tutorials/boxobtainrefreshtoken.c
/petsc/src/sys/webclient/examples/tutorials/boxupload.c
/petsc/src/sys/webclient/examples/tutorials/globusobtaintransfers.c
/petsc/src/sys/webclient/examples/tutorials/googledriveupload.c
/petsc/src/sys/webclient/examples/tutorials/googleobtainrefreshtoken.c
/petsc/src/sys/webclient/examples/tutorials/makefile
/petsc/src/sys/webclient/examples/tutorials/urlshorten.c
/petsc/src/sys/webclient/globus.c
/petsc/src/sys/webclient/google.c
/petsc/src/sys/webclient/makefile
/petsc/src/sys/webclient/textbelt.c
/petsc/src/tao/bound/impls/tron/tron.c
/petsc/src/ts/event/makefile
/petsc/src/ts/event/tsevent.c
/petsc/src/ts/examples/tests/ex21.c
/petsc/src/ts/examples/tests/ex22.c
/petsc/src/ts/examples/tests/ex23.c
/petsc/src/ts/examples/tests/makefile
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/impls/arkimex/arkimex.c
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/makefile
/petsc/src/vec/is/is/impls/block/block.c
/petsc/src/vec/is/is/impls/general/general.c
/petsc/src/vec/is/is/impls/general/general.h
/petsc/src/vec/is/is/impls/stride/stride.c
/petsc/src/vec/is/is/interface/index.c
/petsc/src/vec/is/is/interface/isreg.c
/petsc/src/vec/is/utils/isio.c
/petsc/src/vec/is/utils/makefile
/petsc/src/vec/is/utils/vsectionis.c
/petsc/src/vec/vec/utils/vecio.c
/petsc/src/vec/vec/utils/vsection.c
58128b4d30-Mar-2014 Jed Brown <jed@jedbrown.org>

config libraries.toStringNoDups: remove duplicate entries appearing in sequence


/petsc/conf/test
config/libraries.py
/petsc/config/PETSc/packages/ssl.py
/petsc/include/petsc-private/dmpleximpl.h
/petsc/include/petsc-private/petscfeimpl.h
/petsc/include/petsc-private/tsimpl.h
/petsc/include/petscdmplex.h
/petsc/include/petscerror.h
/petsc/include/petscfe.h
/petsc/include/petscmath.h
/petsc/include/petscsys.h
/petsc/include/petscts.h
/petsc/include/petscwebclient.h
/petsc/makefile
/petsc/src/benchmarks/streams/BasicVersion.c
/petsc/src/benchmarks/streams/MPIVersion.c
/petsc/src/benchmarks/streams/PthreadVersion.c
/petsc/src/benchmarks/streams/makefile
/petsc/src/benchmarks/streams/process.py
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/impls/plex/examples/tests/ex1.c
/petsc/src/dm/impls/plex/examples/tests/ex7.c
/petsc/src/dm/impls/plex/examples/tests/ex8.c
/petsc/src/dm/impls/plex/plexcgns.c
/petsc/src/dm/impls/plex/plexexodusii.c
/petsc/src/dm/impls/plex/plexfem.c
/petsc/src/dm/impls/plex/plexgmsh.c
/petsc/src/dm/impls/plex/plexrefine.c
/petsc/src/dm/impls/plex/plexsubmesh.c
/petsc/src/dm/impls/shell/dmshell.c
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/ksp/ksp/examples/tutorials/ex3.c
/petsc/src/ksp/ksp/impls/cg/stcg/stcg.c
/petsc/src/ksp/ksp/interface/iterativ.c
/petsc/src/mat/examples/tutorials/ex11.c
/petsc/src/snes/examples/tutorials/ex12.c
/petsc/src/snes/examples/tutorials/ex16.c
/petsc/src/snes/examples/tutorials/ex70.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/interface/snes.c
/petsc/src/sys/classes/viewer/impls/socket/send.c
/petsc/src/sys/fileio/sysio.c
/petsc/src/sys/makefile
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/webclient/box.c
/petsc/src/sys/webclient/client.c
/petsc/src/sys/webclient/examples/makefile
/petsc/src/sys/webclient/examples/tutorials/boxobtainrefreshtoken.c
/petsc/src/sys/webclient/examples/tutorials/boxupload.c
/petsc/src/sys/webclient/examples/tutorials/globusobtaintransfers.c
/petsc/src/sys/webclient/examples/tutorials/googledriveupload.c
/petsc/src/sys/webclient/examples/tutorials/googleobtainrefreshtoken.c
/petsc/src/sys/webclient/examples/tutorials/makefile
/petsc/src/sys/webclient/examples/tutorials/urlshorten.c
/petsc/src/sys/webclient/globus.c
/petsc/src/sys/webclient/google.c
/petsc/src/sys/webclient/makefile
/petsc/src/sys/webclient/textbelt.c
/petsc/src/tao/bound/impls/tron/tron.c
/petsc/src/ts/event/makefile
/petsc/src/ts/event/tsevent.c
/petsc/src/ts/examples/tests/ex21.c
/petsc/src/ts/examples/tests/ex22.c
/petsc/src/ts/examples/tests/ex23.c
/petsc/src/ts/examples/tests/makefile
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/impls/arkimex/arkimex.c
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/makefile
a7da843127-Mar-2014 Jed Brown <jed@jedbrown.org>

SF: guard MPI_COMBINER_DUP

Also trust MPI_VERSION to avoid confusing memory corruption if a user
forgets to reconfigure after getting this patch.


/petsc/bin/petsclogformat.py
config/packages/MPI.py
/petsc/config/PETSc/Configure.py
/petsc/config/builder.py
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petsc-private/dmpleximpl.h
/petsc/include/petsc-private/dtimpl.h
/petsc/include/petsc-private/petscfeimpl.h
/petsc/include/petsc-private/sfimpl.h
/petsc/include/petsc-private/snesimpl.h
/petsc/include/petsc-private/taodmimpl.h
/petsc/include/petscbt.h
/petsc/include/petsccusp.h
/petsc/include/petscdm.h
/petsc/include/petscdmda.h
/petsc/include/petscdmplex.h
/petsc/include/petscdt.h
/petsc/include/petscfe.h
/petsc/include/petscis.h
/petsc/include/petscmat.h
/petsc/include/petscmath.h
/petsc/include/petscpc.h
/petsc/include/petscsnes.h
/petsc/include/petsctao.h
/petsc/include/petsctaolinesearch.h
/petsc/include/petscversion.h
/petsc/include/petscviennacl.h
/petsc/makefile
/petsc/src/contrib/style/include-graph.sh
/petsc/src/dm/dt/examples/tests/ex1.c
/petsc/src/dm/dt/examples/tests/output/ex1_1.out
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/da/dadestroy.c
/petsc/src/dm/impls/da/dageometry.c
/petsc/src/dm/impls/da/dalocal.c
/petsc/src/dm/impls/da/gr2.c
/petsc/src/dm/impls/plex/examples/tests/ex3.c
/petsc/src/dm/impls/plex/examples/tests/output/ex3_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_2.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_6.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_7.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_8.out
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexcgns.c
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/plex/plexfem.c
/petsc/src/dm/impls/plex/plexgeometry.c
/petsc/src/dm/impls/plex/plexlabel.c
/petsc/src/dm/impls/plex/plexpreallocate.c
/petsc/src/dm/impls/plex/plexrefine.c
/petsc/src/dm/impls/plex/plexsubmesh.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmi.c
/petsc/src/dm/interface/dmregall.c
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/documentation/index.html
/petsc/src/docs/website/documentation/installation.html
/petsc/src/docs/website/documentation/linearsolvertable.html
/petsc/src/docs/website/documentation/nonlinearsolvertable.html
/petsc/src/docs/website/download/index.html
/petsc/src/docs/website/features/details.html
/petsc/src/docs/website/features/diagram.html
/petsc/src/docs/website/features/gpus.html
/petsc/src/docs/website/index.html
/petsc/src/docs/website/miscellaneous/external.html
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex56_0.out
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/utils/schurm.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/lsc/lsc.c
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/mat/color/impls/jp/jp.c
/petsc/src/mat/color/impls/mis/miscoloring.c
/petsc/src/mat/color/utils/valid.c
/petsc/src/mat/examples/tests/ex126f.F
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/transpose/transm.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/order/spectral.c
/petsc/src/snes/examples/tutorials/ex12.c
/petsc/src/snes/examples/tutorials/ex15.c
/petsc/src/snes/examples/tutorials/ex16.c
/petsc/src/snes/examples/tutorials/ex19.c
/petsc/src/snes/examples/tutorials/ex31.c
/petsc/src/snes/examples/tutorials/ex35.c
/petsc/src/snes/examples/tutorials/ex5.c
/petsc/src/snes/examples/tutorials/ex52.c
/petsc/src/snes/examples/tutorials/ex62.c
/petsc/src/snes/examples/tutorials/ex7.c
/petsc/src/snes/examples/tutorials/ex70.c
/petsc/src/snes/examples/tutorials/ex72.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex12_31.out
/petsc/src/snes/examples/tutorials/output/ex12_32.out
/petsc/src/snes/examples/tutorials/output/ex12_36.out
/petsc/src/snes/examples/tutorials/output/ex16_3.out
/petsc/src/snes/examples/tutorials/output/ex58_1.out
/petsc/src/snes/impls/composite/snescomposite.c
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/gs/gsimpl.h
/petsc/src/snes/impls/gs/gssecant.c
/petsc/src/snes/impls/gs/snesgs.c
/petsc/src/snes/impls/ls/ls.c
/petsc/src/snes/impls/nasm/aspin.c
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/impls/ngmres/anderson.c
/petsc/src/snes/impls/ngmres/ngmresfunc.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/impls/richardson/snesrichardson.c
/petsc/src/snes/interface/dlregissnes.c
/petsc/src/snes/interface/ftn-custom/zsnesf.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snespc.c
/petsc/src/snes/interface/snesregi.c
/petsc/src/snes/mf/snesmfj.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/snes/utils/dmsnes.c
/petsc/src/sys/error/err.c
/petsc/src/sys/error/errtrace.c
/petsc/src/sys/error/pstack.c
/petsc/src/sys/logging/plog.c
/petsc/src/sys/objects/inherit.c
/petsc/src/sys/objects/pinit.c
/petsc/src/tao/complementarity/impls/asls/asfls.c
/petsc/src/tao/complementarity/impls/asls/asils.c
/petsc/src/tao/complementarity/impls/ssls/ssls.c
/petsc/src/tao/util/tao_util.c
/petsc/src/ts/examples/tutorials/ex10.c
/petsc/src/ts/examples/tutorials/ex25.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
/petsc/src/vec/is/sf/interface/sftype.c
/petsc/src/vec/is/utils/isltog.c
908aa86320-Jun-2013 Jed Brown <jedbrown@mcs.anl.gov>

config cgns: add --with-cgns, but no --download-cgns


/petsc/bin/matlab/classes/PetscKSP.m
/petsc/bin/matlab/classes/PetscPC.m
/petsc/bin/matlab/classes/matlabheader.h
/petsc/bin/petsclogformat.py
config/packages/__init__.py
config/packages/cgns.py
/petsc/config/PETSc/Configure.py
/petsc/config/builder.py
/petsc/include/finclude/ftn-custom/petscdmplex.h90
/petsc/include/finclude/petscdmdef.h
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petsc-private/dmpleximpl.h
/petsc/include/petsc-private/dtimpl.h
/petsc/include/petsc-private/petscfeimpl.h
/petsc/include/petsc-private/snesimpl.h
/petsc/include/petsc-private/taodmimpl.h
/petsc/include/petscbt.h
/petsc/include/petsccusp.h
/petsc/include/petscdm.h
/petsc/include/petscdmda.h
/petsc/include/petscdmplex.h
/petsc/include/petscdt.h
/petsc/include/petscfe.h
/petsc/include/petscis.h
/petsc/include/petscmat.h
/petsc/include/petscmath.h
/petsc/include/petscpc.h
/petsc/include/petscsnes.h
/petsc/include/petscsys.h
/petsc/include/petsctao.h
/petsc/include/petsctaolinesearch.h
/petsc/include/petscversion.h
/petsc/include/petscviennacl.h
/petsc/include/petscviewer.h
/petsc/include/petscviewerhdf5.h
/petsc/makefile
/petsc/src/contrib/style/include-graph.sh
/petsc/src/dm/dt/examples/tests/ex1.c
/petsc/src/dm/dt/examples/tests/output/ex1_1.out
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/da/dadestroy.c
/petsc/src/dm/impls/da/dageometry.c
/petsc/src/dm/impls/da/dalocal.c
/petsc/src/dm/impls/da/gr2.c
/petsc/src/dm/impls/plex/examples/tests/ex3.c
/petsc/src/dm/impls/plex/examples/tests/output/ex1_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_2.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_4.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_5.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_6.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_8.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_9.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_10.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_11.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_15.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_16.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_17.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_18.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_19.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_2.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_20.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_3.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_4.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_5.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_6.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_7.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_8.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_9.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_11.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_15.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_17.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_19.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_21.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_23.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_9.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_11.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_12.out
/petsc/src/dm/impls/plex/examples/tutorials/ex3f90.F
/petsc/src/dm/impls/plex/examples/tutorials/output/ex3f90_0.out
/petsc/src/dm/impls/plex/f90-custom/zplexf90.c
/petsc/src/dm/impls/plex/makefile
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexcgns.c
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/plex/plexdistribute.c
/petsc/src/dm/impls/plex/plexfem.c
/petsc/src/dm/impls/plex/plexgeometry.c
/petsc/src/dm/impls/plex/plexlabel.c
/petsc/src/dm/impls/plex/plexpartition.c
/petsc/src/dm/impls/plex/plexpreallocate.c
/petsc/src/dm/impls/plex/plexrefine.c
/petsc/src/dm/impls/plex/plexsubmesh.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmi.c
/petsc/src/dm/interface/dmregall.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/documentation/index.html
/petsc/src/docs/website/documentation/installation.html
/petsc/src/docs/website/documentation/linearsolvertable.html
/petsc/src/docs/website/documentation/nonlinearsolvertable.html
/petsc/src/docs/website/download/index.html
/petsc/src/docs/website/features/details.html
/petsc/src/docs/website/features/diagram.html
/petsc/src/docs/website/features/gpus.html
/petsc/src/docs/website/index.html
/petsc/src/docs/website/miscellaneous/external.html
/petsc/src/ksp/ksp/examples/tests/ex14.c
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tutorials/ex4.c
/petsc/src/ksp/ksp/examples/tutorials/ex42.c
/petsc/src/ksp/ksp/examples/tutorials/ex54.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex56_0.out
/petsc/src/ksp/ksp/impls/gmres/agmres/agmres.c
/petsc/src/ksp/ksp/impls/gmres/agmres/makefile
/petsc/src/ksp/ksp/impls/lsqr/lsqr.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/utils/schurm.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/lsc/lsc.c
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/ksp/pc/impls/parms/parms.c
/petsc/src/mat/color/impls/jp/jp.c
/petsc/src/mat/color/impls/mis/miscoloring.c
/petsc/src/mat/color/utils/valid.c
/petsc/src/mat/examples/tests/ex126f.F
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/transpose/transm.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/order/spectral.c
/petsc/src/snes/examples/tutorials/ex12.c
/petsc/src/snes/examples/tutorials/ex15.c
/petsc/src/snes/examples/tutorials/ex16.c
/petsc/src/snes/examples/tutorials/ex19.c
/petsc/src/snes/examples/tutorials/ex31.c
/petsc/src/snes/examples/tutorials/ex35.c
/petsc/src/snes/examples/tutorials/ex5.c
/petsc/src/snes/examples/tutorials/ex52.c
/petsc/src/snes/examples/tutorials/ex62.c
/petsc/src/snes/examples/tutorials/ex7.c
/petsc/src/snes/examples/tutorials/ex70.c
/petsc/src/snes/examples/tutorials/ex72.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex12_31.out
/petsc/src/snes/examples/tutorials/output/ex12_32.out
/petsc/src/snes/examples/tutorials/output/ex12_36.out
/petsc/src/snes/examples/tutorials/output/ex16_3.out
/petsc/src/snes/examples/tutorials/output/ex58_1.out
/petsc/src/snes/examples/tutorials/output/ex62_31.out
/petsc/src/snes/examples/tutorials/output/ex62_32.out
/petsc/src/snes/examples/tutorials/output/ex62_33.out
/petsc/src/snes/examples/tutorials/output/ex62_34.out
/petsc/src/snes/examples/tutorials/output/ex62_35.out
/petsc/src/snes/examples/tutorials/output/ex62_36.out
/petsc/src/snes/impls/composite/snescomposite.c
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/gs/gsimpl.h
/petsc/src/snes/impls/gs/gssecant.c
/petsc/src/snes/impls/gs/snesgs.c
/petsc/src/snes/impls/ls/ls.c
/petsc/src/snes/impls/nasm/aspin.c
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/impls/ngmres/anderson.c
/petsc/src/snes/impls/ngmres/ngmresfunc.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/impls/richardson/snesrichardson.c
/petsc/src/snes/impls/vi/rsaug/makefile
/petsc/src/snes/impls/vi/rsaug/virsaug.c
/petsc/src/snes/interface/dlregissnes.c
/petsc/src/snes/interface/ftn-custom/zsnesf.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snespc.c
/petsc/src/snes/interface/snesregi.c
/petsc/src/snes/mf/snesmfj.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/snes/utils/dmsnes.c
/petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c
/petsc/src/sys/classes/viewer/interface/viewreg.c
/petsc/src/sys/error/err.c
/petsc/src/sys/error/errtrace.c
/petsc/src/sys/error/pstack.c
/petsc/src/sys/logging/plog.c
/petsc/src/sys/objects/inherit.c
/petsc/src/sys/objects/pinit.c
/petsc/src/tao/complementarity/impls/asls/asfls.c
/petsc/src/tao/complementarity/impls/asls/asils.c
/petsc/src/tao/complementarity/impls/ssls/ssls.c
/petsc/src/tao/util/tao_util.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/makefile
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/output/ex5_1.out
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/output/ex7_1.out
/petsc/src/ts/examples/tutorials/ex10.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/ex25.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/is/utils/vsectionis.c
c22361cb20-Mar-2014 Barry Smith <bsmith@mcs.anl.gov>

Merge branch 'barry/check-external-libs-compatable-shared'

Conflicts:
config/BuildSystem/config/packages/__init__.py
config/configure.py


/petsc/bin/FASTMathInstaller.py
config/package.py
config/packages/BlasLapack.py
config/packages/__init__.py
config/packages/f2cblaslapack.py
config/packages/fblaslapack.py
config/setCompilers.py
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/packages/SuperLU.py
/petsc/config/PETSc/packages/SuperLU_DIST.py
/petsc/config/PETSc/packages/scalapack.py
/petsc/config/PETSc/packages/spai.py
/petsc/config/configure.py
/petsc/config/examples/arch-freebsd-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-freebsd-cxx-pkgs-opt.py
/petsc/config/examples/arch-freebsd-pkgs-opt.py
/petsc/config/examples/arch-linux-gcc-absoft.py
/petsc/config/examples/arch-linux-gcc-ifc.py
/petsc/config/examples/arch-linux-gcc-pgf90.py
/petsc/config/examples/arch-linux-gcc-real-opt.py
/petsc/config/examples/arch-linux-gcc-real.py
/petsc/config/examples/arch-linux-gxx-complex.py
/petsc/config/examples/arch-linux-pkgs-cxx-mlib.py
/petsc/config/examples/arch-linux-pkgs-dbg-ftn-interfaces.py
/petsc/config/examples/arch-linux-pkgs-gcov.py
/petsc/config/examples/arch-linux-pkgs-opt-threadcomm.py
/petsc/config/examples/arch-linux-pkgs-opt.py
/petsc/config/examples/arch-linux-pkgs-threadcomm.py
/petsc/config/examples/arch-linux-pkgs-valgrind.py
/petsc/config/examples/arch-opensolaris-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-opensolaris-pkgs-opt.py
/petsc/config/examples/arch-osx-10.6-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-osx-10.6-cxx-pkgs-opt.py
/petsc/config/examples/basic/arch-gcc-complex-O.py
/petsc/config/examples/basic/arch-gcc-complex.py
/petsc/config/examples/basic/arch-gcc-real-O.py
/petsc/config/examples/basic/arch-gcc-real.py
/petsc/config/examples/basic/arch-gcc64-complex-O.py
/petsc/config/examples/basic/arch-gcc64-complex.py
/petsc/config/examples/basic/arch-gcc64-real-O.py
/petsc/config/examples/basic/arch-gcc64-real.py
/petsc/config/examples/basic/arch-gxx-complex-O.py
/petsc/config/examples/basic/arch-gxx-complex.py
/petsc/config/examples/basic/arch-gxx-real-O.py
/petsc/config/examples/basic/arch-gxx-real.py
/petsc/config/examples/basic/arch-gxx64-complex-O.py
/petsc/config/examples/basic/arch-gxx64-complex.py
/petsc/config/examples/basic/arch-gxx64-real-O.py
/petsc/config/examples/basic/arch-gxx64-real.py
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/installation.html

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