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c17a2b5826-Mar-2012 Satish Balay <balay@mcs.anl.gov>

fix ptscotch build error on ubuntu 12.04 [with -lm]

Hg-commit: 774b2d6a6157d4844a13baf66da41a07a9de1691


/petsc/bin/maint/generatefortranstubs.py
/petsc/conf/test
packages/PTScotch.py
/petsc/config/builder.py
/petsc/config/builder2.py
/petsc/config/examples/arch-cuda-double.py
/petsc/include/finclude/petscsys.h
/petsc/include/petsc-private/characteristicimpl.h
/petsc/include/petsc-private/compleximpl.h
/petsc/include/petsc-private/daimpl.h
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petsc-private/fortranimpl.h
/petsc/include/petsc-private/igaimpl.h
/petsc/include/petsc-private/isimpl.h
/petsc/include/petsc-private/kspimpl.h
/petsc/include/petsc-private/linesearchimpl.h
/petsc/include/petsc-private/logimpl.h
/petsc/include/petsc-private/makefile
/petsc/include/petsc-private/matimpl.h
/petsc/include/petsc-private/meshimpl.h
/petsc/include/petsc-private/pcimpl.h
/petsc/include/petsc-private/petscaxpy.h
/petsc/include/petsc-private/petscimpl.h
/petsc/include/petsc-private/sfimpl.h
/petsc/include/petsc-private/snesimpl.h
/petsc/include/petsc-private/tsimpl.h
/petsc/include/petsc-private/vecimpl.h
/petsc/include/petsc-private/viewerimpl.h
/petsc/include/petscblaslapack_stdcall.h
/petsc/include/petscdm.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/include/petscsys.h
/petsc/include/petscvec.h
/petsc/src/contrib/fun3d/comp/user.h
/petsc/src/contrib/fun3d/incomp/user.h
/petsc/src/dm/ao/impls/basic/ftn-custom/zaobasicf.c
/petsc/src/dm/ao/impls/mapping/ftn-custom/zaomappingf.c
/petsc/src/dm/ao/interface/dlregisdm.c
/petsc/src/dm/ao/interface/ftn-custom/zaof.c
/petsc/src/dm/examples/tests/ex21.c
/petsc/src/dm/examples/tests/ex36.c
/petsc/src/dm/impls/adda/addaimpl.h
/petsc/src/dm/impls/cartesian/cartesian.c
/petsc/src/dm/impls/complex/complex.c
/petsc/src/dm/impls/complex/complexcreate.c
/petsc/src/dm/impls/complex/ctetgen.c
/petsc/src/dm/impls/complex/examples/tests/ex1.c
/petsc/src/dm/impls/composite/ftn-custom/zfddaf.c
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/composite/packimpl.h
/petsc/src/dm/impls/da/da.c
/petsc/src/dm/impls/da/da1.c
/petsc/src/dm/impls/da/da2.c
/petsc/src/dm/impls/da/da3.c
/petsc/src/dm/impls/da/dacorn.c
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/da/dadestroy.c
/petsc/src/dm/impls/da/dadist.c
/petsc/src/dm/impls/da/dagetelem.c
/petsc/src/dm/impls/da/daghost.c
/petsc/src/dm/impls/da/dagtol.c
/petsc/src/dm/impls/da/dagtona.c
/petsc/src/dm/impls/da/daindex.c
/petsc/src/dm/impls/da/dainterp.c
/petsc/src/dm/impls/da/dalocal.c
/petsc/src/dm/impls/da/daltol.c
/petsc/src/dm/impls/da/dapf.c
/petsc/src/dm/impls/da/dareg.c
/petsc/src/dm/impls/da/dascatter.c
/petsc/src/dm/impls/da/dasub.c
/petsc/src/dm/impls/da/daview.c
/petsc/src/dm/impls/da/fdda.c
/petsc/src/dm/impls/da/ftn-custom/zda.c
/petsc/src/dm/impls/da/ftn-custom/zda1f.c
/petsc/src/dm/impls/da/ftn-custom/zda2f.c
/petsc/src/dm/impls/da/ftn-custom/zda3f.c
/petsc/src/dm/impls/da/ftn-custom/zdacornf.c
/petsc/src/dm/impls/da/ftn-custom/zdagetscatterf.c
/petsc/src/dm/impls/da/ftn-custom/zdaindexf.c
/petsc/src/dm/impls/da/ftn-custom/zdaviewf.c
/petsc/src/dm/impls/da/gr2.c
/petsc/src/dm/impls/da/grvtk.c
/petsc/src/dm/impls/da/hypre/mhyp.c
/petsc/src/dm/impls/da/makefile
/petsc/src/dm/impls/da/usfft/matusfft.c
/petsc/src/dm/impls/iga/iga.c
/petsc/src/dm/impls/iga/igacreate.c
/petsc/src/dm/impls/mesh/examples/tests/ex1.c
/petsc/src/dm/impls/mesh/f90-custom/zmeshf90.c
/petsc/src/dm/impls/mesh/f90-custom/zsectionf90.c
/petsc/src/dm/impls/mesh/ftn-custom/zmesh.c
/petsc/src/dm/impls/mesh/ftn-custom/zsection.c
/petsc/src/dm/impls/mesh/mesh.c
/petsc/src/dm/impls/mesh/meshcreate.c
/petsc/src/dm/impls/mesh/meshlagrit.c
/petsc/src/dm/impls/mesh/section.c
/petsc/src/dm/impls/redundant/dmredundant.c
/petsc/src/dm/impls/shell/dmshell.c
/petsc/src/dm/impls/sliced/sliced.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/ftn-custom/zdmf.c
/petsc/src/docs/tex/manual/developers.tex
/petsc/src/docs/website/documentation/changes/231.html
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/ksp/examples/tutorials/ex42.c
/petsc/src/ksp/ksp/examples/tutorials/ex8.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/impls/bcgs/bcgs.c
/petsc/src/ksp/ksp/impls/bcgsl/bcgsl.c
/petsc/src/ksp/ksp/impls/bicg/bicg.c
/petsc/src/ksp/ksp/impls/broyden/broydenimpl.h
/petsc/src/ksp/ksp/impls/cg/cgimpl.h
/petsc/src/ksp/ksp/impls/cg/gltr/gltr.c
/petsc/src/ksp/ksp/impls/cg/nash/nash.c
/petsc/src/ksp/ksp/impls/cg/stcg/stcg.c
/petsc/src/ksp/ksp/impls/cgs/cgs.c
/petsc/src/ksp/ksp/impls/cheby/cheby.c
/petsc/src/ksp/ksp/impls/cr/cr.c
/petsc/src/ksp/ksp/impls/gcr/gcr.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmresimpl.h
/petsc/src/ksp/ksp/impls/gmres/fgmres/fgmresimpl.h
/petsc/src/ksp/ksp/impls/gmres/fgmres/ftn-custom/zmodpcff.c
/petsc/src/ksp/ksp/impls/gmres/gmresimpl.h
/petsc/src/ksp/ksp/impls/gmres/lgmres/lgmresimpl.h
/petsc/src/ksp/ksp/impls/ibcgs/ibcgs.c
/petsc/src/ksp/ksp/impls/lcd/lcdimpl.h
/petsc/src/ksp/ksp/impls/lsqr/lsqr.c
/petsc/src/ksp/ksp/impls/lsqr/lsqr_converged.c
/petsc/src/ksp/ksp/impls/minres/minres.c
/petsc/src/ksp/ksp/impls/preonly/preonly.c
/petsc/src/ksp/ksp/impls/python/ftn-custom/zpythonkf.c
/petsc/src/ksp/ksp/impls/python/pythonK.c
/petsc/src/ksp/ksp/impls/qcg/qcg.c
/petsc/src/ksp/ksp/impls/rich/rich.c
/petsc/src/ksp/ksp/impls/rich/richscale.c
/petsc/src/ksp/ksp/impls/specest/specest.c
/petsc/src/ksp/ksp/impls/symmlq/symmlq.c
/petsc/src/ksp/ksp/impls/tcqmr/tcqmr.c
/petsc/src/ksp/ksp/impls/tfqmr/tfqmr.c
/petsc/src/ksp/ksp/interface/dlregisksp.c
/petsc/src/ksp/ksp/interface/dmksp.c
/petsc/src/ksp/ksp/interface/eige.c
/petsc/src/ksp/ksp/interface/ftn-custom/zdmkspf.c
/petsc/src/ksp/ksp/interface/ftn-custom/zitclf.c
/petsc/src/ksp/ksp/interface/ftn-custom/zitcreatef.c
/petsc/src/ksp/ksp/interface/ftn-custom/zitfuncf.c
/petsc/src/ksp/ksp/interface/ftn-custom/zxonf.c
/petsc/src/ksp/ksp/interface/iguess.c
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/ksp/ksp/interface/iterativ.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/interface/itregis.c
/petsc/src/ksp/ksp/interface/itres.c
/petsc/src/ksp/ksp/interface/kspams.c
/petsc/src/ksp/ksp/interface/xmon.c
/petsc/src/ksp/ksp/makefile
/petsc/src/ksp/ksp/utils/schurm.c
/petsc/src/ksp/pc/impls/ainvcusp/ainvcusp.cu
/petsc/src/ksp/pc/impls/asa/asa.c
/petsc/src/ksp/pc/impls/asa/asa.h
/petsc/src/ksp/pc/impls/asm/asm.c
/petsc/src/ksp/pc/impls/asm/ftn-custom/zasmf.c
/petsc/src/ksp/pc/impls/bicgstabcusp/bicgstabcusp.cu
/petsc/src/ksp/pc/impls/bjacobi/bjacobi.c
/petsc/src/ksp/pc/impls/bjacobi/bjacobi.h
/petsc/src/ksp/pc/impls/bjacobi/ftn-custom/zbjacobif.c
/petsc/src/ksp/pc/impls/composite/composite.c
/petsc/src/ksp/pc/impls/composite/ftn-custom/zcompositef.c
/petsc/src/ksp/pc/impls/cp/cp.c
/petsc/src/ksp/pc/impls/eisens/eisen.c
/petsc/src/ksp/pc/impls/factor/factor.h
/petsc/src/ksp/pc/impls/factor/ftn-custom/zluf.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/galerkin/galerkin.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/gamg.h
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/gamg/tools.c
/petsc/src/ksp/pc/impls/gasm/gasm.c
/petsc/src/ksp/pc/impls/hypre/ftn-custom/zhypref.c
/petsc/src/ksp/pc/impls/hypre/hypre.c
/petsc/src/ksp/pc/impls/is/pcis.h
/petsc/src/ksp/pc/impls/jacobi/jacobi.c
/petsc/src/ksp/pc/impls/ksp/pcksp.c
/petsc/src/ksp/pc/impls/lsc/lsc.c
/petsc/src/ksp/pc/impls/mat/pcmat.c
/petsc/src/ksp/pc/impls/mg/ftn-custom/zmgf.c
/petsc/src/ksp/pc/impls/mg/ftn-custom/zmgfuncf.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/mg/mgimpl.h
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/ksp/pc/impls/none/none.c
/petsc/src/ksp/pc/impls/openmp/openmp.c
/petsc/src/ksp/pc/impls/parms/parms.c
/petsc/src/ksp/pc/impls/pbjacobi/pbjacobi.c
/petsc/src/ksp/pc/impls/prometheus/petscprom.c
/petsc/src/ksp/pc/impls/python/ftn-custom/zpythonpf.c
/petsc/src/ksp/pc/impls/python/pythonP.c
/petsc/src/ksp/pc/impls/redistribute/redistribute.c
/petsc/src/ksp/pc/impls/redundant/redundant.c
/petsc/src/ksp/pc/impls/sacusp/sacusp.cu
/petsc/src/ksp/pc/impls/sacusp/sacusppoly.cu
/petsc/src/ksp/pc/impls/shell/ftn-custom/zshellpcf.c
/petsc/src/ksp/pc/impls/shell/shellpc.c
/petsc/src/ksp/pc/impls/sor/sor.c
/petsc/src/ksp/pc/impls/spai/ispai.c
/petsc/src/ksp/pc/impls/supportgraph/lowstretch.cpp
/petsc/src/ksp/pc/impls/supportgraph/supportgraph.c
/petsc/src/ksp/pc/impls/svd/svd.c
/petsc/src/ksp/pc/impls/tfs/tfs.c
/petsc/src/ksp/pc/interface/ftn-custom/zpcsetf.c
/petsc/src/ksp/pc/interface/ftn-custom/zpreconf.c
/petsc/src/ksp/pc/interface/pcregis.c
/petsc/src/ksp/pc/interface/pcset.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/ksp/pc/makefile
/petsc/src/mat/coarsen/coarsen.c
/petsc/src/mat/coarsen/impls/hem/hem.c
/petsc/src/mat/coarsen/impls/mis/mis.c
/petsc/src/mat/color/color.c
/petsc/src/mat/color/ftn-custom/zcolorf.c
/petsc/src/mat/examples/tests/ex162.c
/petsc/src/mat/examples/tests/ex22.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tutorials/ex13.c
/petsc/src/mat/ftn-custom/zmat.c
/petsc/src/mat/impls/adic/matadic.c
/petsc/src/mat/impls/adic/nladic.c
/petsc/src/mat/impls/adj/mpi/ftn-custom/zmpiadjf.c
/petsc/src/mat/impls/adj/mpi/mpiadj.h
/petsc/src/mat/impls/aij/aij/aijtype.c
/petsc/src/mat/impls/aij/mpi/ftn-custom/zmpiaijf.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpicusp/mpiaijAssemble.cu
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/ftn-custom/zaijf.c
/petsc/src/mat/impls/aij/seq/seqcusp/aijAssemble.cu
/petsc/src/mat/impls/aij/seq/seqcusp/aijcusp.cu
/petsc/src/mat/impls/aij/seq/seqpthread/seqaijpthread.c
/petsc/src/mat/impls/aij/seq/spooles/spooles.h
/petsc/src/mat/impls/baij/mpi/ftn-custom/zmpibaijf.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/baij/seq/baij.h
/petsc/src/mat/impls/baij/seq/baijfact2.c
/petsc/src/mat/impls/baij/seq/ftn-custom/zbaijf.c
/petsc/src/mat/impls/blockmat/seq/blockmat.c
/petsc/src/mat/impls/composite/mcomposite.c
/petsc/src/mat/impls/cufft/cufft.cu
/petsc/src/mat/impls/dense/mpi/ftn-custom/zmpidensef.c
/petsc/src/mat/impls/dense/seq/dense.h
/petsc/src/mat/impls/dense/seq/ftn-custom/zdensef.c
/petsc/src/mat/impls/fft/fft.h
/petsc/src/mat/impls/fft/fftw/fftw.c
/petsc/src/mat/impls/ij/matij.c
/petsc/src/mat/impls/ij/stashij.h
/petsc/src/mat/impls/is/matis.h
/petsc/src/mat/impls/localref/mlocalref.c
/petsc/src/mat/impls/lrc/lrc.c
/petsc/src/mat/impls/maij/maij.c
/petsc/src/mat/impls/mffd/ftn-custom/zmffdf.c
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/mffd/mffddef.c
/petsc/src/mat/impls/mffd/wp.c
/petsc/src/mat/impls/nest/matnestimpl.h
/petsc/src/mat/impls/normal/normm.c
/petsc/src/mat/impls/python/ftn-custom/zpythonmf.c
/petsc/src/mat/impls/python/pythonmat.c
/petsc/src/mat/impls/sbaij/mpi/ftn-custom/zmpisbaijf.c
/petsc/src/mat/impls/sbaij/mpi/mpiaijsbaij.c
/petsc/src/mat/impls/sbaij/seq/ftn-custom/zsbaijf.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.h
/petsc/src/mat/impls/scatter/mscatter.c
/petsc/src/mat/impls/shell/ftn-custom/zshellf.c
/petsc/src/mat/impls/shell/shell.c
/petsc/src/mat/impls/shell/shellcnv.c
/petsc/src/mat/impls/submat/submat.c
/petsc/src/mat/impls/transpose/transm.c
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/ftn-custom/zmatregf.c
/petsc/src/mat/interface/ftn-custom/zmatrixf.c
/petsc/src/mat/interface/matnull.c
/petsc/src/mat/interface/matreg.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/interface/mhas.c
/petsc/src/mat/makefile
/petsc/src/mat/matfd/fdmatrix.c
/petsc/src/mat/matfd/ftn-custom/zfdmatrixf.c
/petsc/src/mat/order/ftn-custom/zsorderf.c
/petsc/src/mat/order/sorder.c
/petsc/src/mat/order/sregis.c
/petsc/src/mat/partition/ftn-custom/zpartitionf.c
/petsc/src/mat/partition/impls/party/ftn-custom/zpartyf.c
/petsc/src/mat/partition/partition.c
/petsc/src/mat/utils/axpy.c
/petsc/src/mat/utils/compressedrow.c
/petsc/src/mat/utils/convert.c
/petsc/src/mat/utils/gcreate.c
/petsc/src/mat/utils/getcolv.c
/petsc/src/mat/utils/matstash.c
/petsc/src/mat/utils/matstashspace.c
/petsc/src/mat/utils/multequal.c
/petsc/src/mat/utils/zerodiag.c
/petsc/src/snes/examples/tutorials/ex22.c
/petsc/src/snes/examples/tutorials/ex48.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex44_0.out
/petsc/src/snes/examples/tutorials/output/ex45_0.out
/petsc/src/snes/ftn-custom/zdmmg.c
/petsc/src/snes/impls/fas/fasimpls.h
/petsc/src/snes/impls/gs/snesgs.c
/petsc/src/snes/impls/ksponly/ksponly.c
/petsc/src/snes/impls/ls/lsimpl.h
/petsc/src/snes/impls/ms/ms.c
/petsc/src/snes/impls/multiblock/multiblock.c
/petsc/src/snes/impls/ncg/snesncgimpl.h
/petsc/src/snes/impls/ngmres/snesngmres.h
/petsc/src/snes/impls/python/ftn-custom/zpythonsf.c
/petsc/src/snes/impls/python/pythonsnes.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/impls/richardson/snesrichardsonimpl.h
/petsc/src/snes/impls/shell/snesshell.c
/petsc/src/snes/impls/sorqn/sorqn.c
/petsc/src/snes/impls/test/snestest.c
/petsc/src/snes/impls/tr/trimpl.h
/petsc/src/snes/impls/vi/rs/virs.c
/petsc/src/snes/impls/vi/rs/virsimpl.h
/petsc/src/snes/impls/vi/rsaug/virsaug.c
/petsc/src/snes/impls/vi/rsaug/virsaugimpl.h
/petsc/src/snes/impls/vi/ss/viss.c
/petsc/src/snes/impls/vi/ss/vissimpl.h
/petsc/src/snes/impls/vi/viimpl.h
/petsc/src/snes/interface/dlregissnes.c
/petsc/src/snes/interface/ftn-custom/zsnesf.c
/petsc/src/snes/interface/noise/snesmfj2.c
/petsc/src/snes/interface/noise/snesnoise.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesj.c
/petsc/src/snes/interface/snesj2.c
/petsc/src/snes/interface/snesregi.c
/petsc/src/snes/interface/snesut.c
/petsc/src/snes/linesearch/impls/basic/linesearchbasic.c
/petsc/src/snes/linesearch/impls/bt/linesearchbt.c
/petsc/src/snes/linesearch/impls/cp/linesearchcp.c
/petsc/src/snes/linesearch/impls/l2/linesearchl2.c
/petsc/src/snes/linesearch/impls/shell/ftn-custom/zlinesearchshellf.c
/petsc/src/snes/linesearch/impls/shell/linesearchshell.c
/petsc/src/snes/linesearch/interface/ftn-custom/zlinesearchf.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/snes/linesearch/interface/linesearchregi.c
/petsc/src/snes/linesearch/makefile
/petsc/src/snes/makefile
/petsc/src/snes/mf/snesmfj.c
/petsc/src/snes/utils/damg.c
/petsc/src/snes/utils/damgsnes.c
/petsc/src/snes/utils/dmdasnes.c
/petsc/src/snes/utils/dmsnes.c
/petsc/src/snes/utils/ftn-custom/zdamgf.c
/petsc/src/snes/utils/ftn-custom/zdamgsnesf.c
/petsc/src/sys/bag/f90-custom/zbagf90.c
/petsc/src/sys/comm/examples/tests/ex1.c
/petsc/src/sys/comm/sectioncopy.c
/petsc/src/sys/draw/impls/x/ftn-custom/zdrawopenxf.c
/petsc/src/sys/draw/interface/ftn-custom/zdrawf.c
/petsc/src/sys/draw/interface/ftn-custom/zdrawregf.c
/petsc/src/sys/draw/interface/ftn-custom/zdtextf.c
/petsc/src/sys/draw/interface/ftn-custom/zdtextvf.c
/petsc/src/sys/draw/interface/ftn-custom/zdtrif.c
/petsc/src/sys/draw/utils/ftn-custom/zaxisf.c
/petsc/src/sys/draw/utils/ftn-custom/zzoomf.c
/petsc/src/sys/error/ftn-custom/zerrf.c
/petsc/src/sys/f90-src/f90impl.h
/petsc/src/sys/fileio/ftn-custom/zghomef.c
/petsc/src/sys/fileio/ftn-custom/zmpiuopenf.c
/petsc/src/sys/fileio/ftn-custom/zmprintf.c
/petsc/src/sys/fileio/ftn-custom/zsysiof.c
/petsc/src/sys/ftn-custom/makefile
/petsc/src/sys/ftn-custom/zplog.c
/petsc/src/sys/ftn-custom/zstart.c
/petsc/src/sys/ftn-custom/zstartf.c
/petsc/src/sys/ftn-custom/zsys.c
/petsc/src/sys/ftn-custom/zutils.c
/petsc/src/sys/matlabengine/ftn-custom/zmatlabf.c
/petsc/src/sys/memory/ftn-custom/zmtrf.c
/petsc/src/sys/objects/ftn-custom/zdestroyf.c
/petsc/src/sys/objects/ftn-custom/zgcommf.c
/petsc/src/sys/objects/ftn-custom/zoptionsf.c
/petsc/src/sys/objects/ftn-custom/zpgnamef.c
/petsc/src/sys/objects/ftn-custom/zpnamef.c
/petsc/src/sys/objects/ftn-custom/zprefixf.c
/petsc/src/sys/plog/ftn-custom/zplogf.c
/petsc/src/sys/plog/makefile
/petsc/src/sys/plog/plog.c
/petsc/src/sys/plog/utils/classLog.c
/petsc/src/sys/plog/utils/eventLog.c
/petsc/src/sys/plog/utils/stack.c
/petsc/src/sys/plog/utils/stageLog.c
/petsc/src/sys/python/ftn-custom/zpythonf.c
/petsc/src/sys/sf/dlregissf.c
/petsc/src/sys/sf/makefile
/petsc/src/sys/sf/sf.c
/petsc/src/sys/utils/ftn-custom/zarchf.c
/petsc/src/sys/utils/ftn-custom/zpbarrierf.c
/petsc/src/sys/utils/ftn-custom/zstrf.c
/petsc/src/sys/verbose/ftn-custom/zverboseinfof.c
/petsc/src/sys/viewer/impls/ams/ams.c
/petsc/src/sys/viewer/impls/ams/amsopen.c
/petsc/src/sys/viewer/impls/ascii/asciiimpl.h
/petsc/src/sys/viewer/impls/ascii/ftn-custom/zfilevf.c
/petsc/src/sys/viewer/impls/ascii/ftn-custom/zvcreatef.c
/petsc/src/sys/viewer/impls/binary/binv.c
/petsc/src/sys/viewer/impls/binary/f90-custom/zbinvf90.c
/petsc/src/sys/viewer/impls/binary/ftn-custom/zbinvf.c
/petsc/src/sys/viewer/impls/draw/ftn-custom/zdrawvf.c
/petsc/src/sys/viewer/impls/draw/vdraw.h
/petsc/src/sys/viewer/impls/hdf5/ftn-custom/zhdf5f.c
/petsc/src/sys/viewer/impls/hdf5/hdf5v.c
/petsc/src/sys/viewer/impls/mathematica/mathematica.c
/petsc/src/sys/viewer/impls/mathematica/mathematica.h
/petsc/src/sys/viewer/impls/matlab/ftn-custom/zvmatlabf.c
/petsc/src/sys/viewer/impls/matlab/vmatlab.c
/petsc/src/sys/viewer/impls/socket/ftn-custom/zsendf.c
/petsc/src/sys/viewer/impls/socket/socket.h
/petsc/src/sys/viewer/impls/string/ftn-custom/zstringvf.c
/petsc/src/sys/viewer/impls/string/stringv.c
/petsc/src/sys/viewer/impls/vtk/ftn-custom/zvtkvf.c
/petsc/src/sys/viewer/impls/vtk/vtkvimpl.h
/petsc/src/sys/viewer/impls/vu/petscvu.c
/petsc/src/sys/viewer/interface/dupl.c
/petsc/src/sys/viewer/interface/flush.c
/petsc/src/sys/viewer/interface/ftn-custom/zviewaf.c
/petsc/src/sys/viewer/interface/view.c
/petsc/src/sys/viewer/interface/viewa.c
/petsc/src/sys/viewer/interface/viewreg.c
/petsc/src/sys/viewer/interface/viewregall.c
/petsc/src/sys/viewer/makefile
/petsc/src/ts/adapt/impls/basic/adaptbasic.c
/petsc/src/ts/adapt/impls/cfl/adaptcfl.c
/petsc/src/ts/adapt/impls/none/adaptnone.c
/petsc/src/ts/adapt/interface/tsadapt.c
/petsc/src/ts/adapt/makefile
/petsc/src/ts/characteristic/impls/da/slda.h
/petsc/src/ts/characteristic/interface/characteristic.c
/petsc/src/ts/characteristic/interface/mocregis.c
/petsc/src/ts/characteristic/interface/slregis.c
/petsc/src/ts/characteristic/makefile
/petsc/src/ts/examples/tutorials/util2.c
/petsc/src/ts/impls/arkimex/arkimex.c
/petsc/src/ts/impls/arkimex/ftn-custom/zarkimexf.c
/petsc/src/ts/impls/explicit/euler/euler.c
/petsc/src/ts/impls/explicit/rk/rk.c
/petsc/src/ts/impls/explicit/ssp/ftn-custom/zsspf.c
/petsc/src/ts/impls/explicit/ssp/ssp.c
/petsc/src/ts/impls/implicit/alpha/alpha.c
/petsc/src/ts/impls/implicit/gl/gl.h
/petsc/src/ts/impls/implicit/sundials/ftn-custom/zsundialsf.c
/petsc/src/ts/impls/implicit/sundials/sundials.h
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/impls/pseudo/posindep.c
/petsc/src/ts/impls/python/ftn-custom/zpythontf.c
/petsc/src/ts/impls/python/pythonts.c
/petsc/src/ts/impls/rosw/ftn-custom/zroswf.c
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/ts/interface/dlregists.c
/petsc/src/ts/interface/ftn-custom/ztscreatef.c
/petsc/src/ts/interface/ftn-custom/ztsf.c
/petsc/src/ts/interface/ftn-custom/ztsregf.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tscreate.c
/petsc/src/ts/interface/tsreg.c
/petsc/src/ts/interface/tsregall.c
/petsc/src/ts/makefile
/petsc/src/vec/ftn-custom/zis.c
/petsc/src/vec/is/impls/block/block.c
/petsc/src/vec/is/impls/block/ftn-custom/zblockf.c
/petsc/src/vec/is/impls/general/general.h
/petsc/src/vec/is/impls/stride/stride.c
/petsc/src/vec/is/interface/ftn-custom/zindexf.c
/petsc/src/vec/is/interface/index.c
/petsc/src/vec/is/interface/isreg.c
/petsc/src/vec/is/interface/isregall.c
/petsc/src/vec/is/makefile
/petsc/src/vec/is/utils/ftn-custom/ziscoloringf.c
/petsc/src/vec/is/utils/ftn-custom/zisltogf.c
/petsc/src/vec/is/utils/isdiff.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/vec/examples/tutorials/ex7.c
/petsc/src/vec/vec/examples/tutorials/makefile
/petsc/src/vec/vec/examples/tutorials/output/ex1_pthread.out
/petsc/src/vec/vec/impls/dvecimpl.h
/petsc/src/vec/vec/impls/hypre/vhyp.c
/petsc/src/vec/vec/impls/mpi/ftn-custom/zpbvecf.c
/petsc/src/vec/vec/impls/mpi/mpipthread/mpivecpthread.c
/petsc/src/vec/vec/impls/mpi/pmap.c
/petsc/src/vec/vec/impls/mpi/pvec2.c
/petsc/src/vec/vec/impls/mpi/pvecimpl.h
/petsc/src/vec/vec/impls/nest/vecnest.c
/petsc/src/vec/vec/impls/nest/vecnestimpl.h
/petsc/src/vec/vec/impls/seq/bvec1.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/impls/seq/bvec3.c
/petsc/src/vec/vec/impls/seq/dvec2.c
/petsc/src/vec/vec/impls/seq/ftn-custom/zbvec2f.c
/petsc/src/vec/vec/impls/seq/seqcusp/cuspvecimpl.h
/petsc/src/vec/vec/impls/seq/seqcusp/veccusp.cu
/petsc/src/vec/vec/impls/seq/seqpthread/tmap.c
/petsc/src/vec/vec/impls/seq/seqpthread/vecpthread.c
/petsc/src/vec/vec/impls/seq/seqpthread/vecpthreadimpl.h
/petsc/src/vec/vec/impls/seq/vsection.c
/petsc/src/vec/vec/impls/seq/vseqcr.c
/petsc/src/vec/vec/interface/ftn-custom/zvecregf.c
/petsc/src/vec/vec/interface/ftn-custom/zvectorf.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/veccreate.c
/petsc/src/vec/vec/interface/vecreg.c
/petsc/src/vec/vec/interface/vecregall.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/makefile
/petsc/src/vec/vec/utils/comb.c
/petsc/src/vec/vec/utils/ftn-custom/zvscatf.c
/petsc/src/vec/vec/utils/veccusp/vscatcusp.c
/petsc/src/vec/vec/utils/vecio.c
/petsc/src/vec/vec/utils/vecmpitoseq.c
/petsc/src/vec/vec/utils/vecstash.c
/petsc/src/vec/vec/utils/vinv.c
/petsc/src/vec/vec/utils/vpscat.c
/petsc/src/vec/vec/utils/vscat.c
/petsc/tutorials/python/ex1.c
/petsc/tutorials/python/ex1.py
/petsc/tutorials/python/ex1f.F
0d654bb323-Mar-2012 Matthew G Knepley <knepley@gmail.com>

3D tests working for ex52 (GPU residuals), fixed many bugs
- Fixed bug in FEM.py when generating inline basis structs
- Fixed bug in ex52 f1_elasticity()
- Use SPATIAL_DIM_0 macro for dimension in ex

3D tests working for ex52 (GPU residuals), fixed many bugs
- Fixed bug in FEM.py when generating inline basis structs
- Fixed bug in ex52 f1_elasticity()
- Use SPATIAL_DIM_0 macro for dimension in ex52

Hg-commit: fb8de26a2b86995bb87ec8f988397647a9a8e294

show more ...


FEM.py
/petsc/config/builder.py
/petsc/config/configure.py
/petsc/src/ksp/pc/impls/asa/asa.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/snes/examples/tutorials/ex52.c
/petsc/src/snes/examples/tutorials/ex52_integrateElement.cu
/petsc/src/snes/examples/tutorials/output/ex52_21.out
/petsc/src/snes/examples/tutorials/output/ex52_22.out
/petsc/src/snes/examples/tutorials/output/ex52_23.out
/petsc/src/snes/examples/tutorials/output/ex52_24.out
/petsc/src/snes/examples/tutorials/output/ex52_25.out
/petsc/src/snes/examples/tutorials/output/ex52_26.out
/petsc/src/snes/examples/tutorials/output/ex52_27.out
/petsc/src/snes/examples/tutorials/output/ex52_28.out
/petsc/src/snes/examples/tutorials/output/ex52_29.out
/petsc/src/snes/examples/tutorials/output/ex52_30.out
/petsc/src/snes/examples/tutorials/output/ex52_31.out
/petsc/src/snes/examples/tutorials/output/ex58_1.out
/petsc/src/snes/examples/tutorials/output/ex58_2.out
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/vi/vi.c
/petsc/src/sys/viewer/impls/binary/binv.c
e86c656023-Mar-2012 Matthew G Knepley <knepley@gmail.com>

3D tests passing for ex52 (Laplacian on GPU), Fixed bug with real type in DMComplex refinement
- Separated GPU information into 2 headers
- Made changes for 3D in ex52_integrateElement.cu

Hg-commit:

3D tests passing for ex52 (Laplacian on GPU), Fixed bug with real type in DMComplex refinement
- Separated GPU information into 2 headers
- Made changes for 3D in ex52_integrateElement.cu

Hg-commit: 7560c0783bda009dfb967ad02d913c48a6df10b9

show more ...


/petsc/.hgignore
/petsc/bin/matlab/@PetscOpenSocket/read.m
FEM.py
/petsc/config/builder.py
/petsc/config/cmakeboot.py
/petsc/include/finclude/petscsnes.h
/petsc/include/finclude/petscsnesdef.h
/petsc/include/petscerror.h
/petsc/src/dm/impls/complex/complex.c
/petsc/src/docs/website/documentation/tutorials/index.html
/petsc/src/ksp/ksp/impls/gmres/gmreig.c
/petsc/src/ksp/ksp/interface/eige.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/svd/svd.c
/petsc/src/snes/examples/tutorials/ex52.c
/petsc/src/snes/examples/tutorials/ex52_integrateElement.cu
/petsc/src/snes/examples/tutorials/output/ex52_18.out
/petsc/src/snes/examples/tutorials/output/ex52_19.out
/petsc/src/snes/examples/tutorials/output/ex52_20.out
/petsc/src/snes/examples/tutorials/output/ex52_21.out
/petsc/src/snes/linesearch/impls/cp/linesearchcp.c
/petsc/src/snes/linesearch/impls/l2/linesearchl2.c
/petsc/src/sys/error/fp.c
/petsc/src/sys/viewer/impls/socket/matlab/bread.c
5816802f22-Mar-2012 Barry Smith <bsmith@mcs.anl.gov>

commit after merge

Hg-commit: 91990355ddeed5e72c092253865a33777b722adc


/petsc/.hgignore
Configure.py
/petsc/config/builder.py
/petsc/include/finclude/petscsnes.h
/petsc/include/petscdmmesh.h
/petsc/include/petscsnes.h
/petsc/include/private/linesearchimpl.h
/petsc/include/private/petscimpl.h
/petsc/include/private/snesimpl.h
/petsc/include/private/vecimpl.h
/petsc/include/sieve/ISieve.hh
/petsc/src/dm/impls/complex/complex.c
/petsc/src/dm/impls/complex/ctetgen.c
/petsc/src/dm/impls/mesh/mesh.c
/petsc/src/ksp/ksp/examples/tests/ex33.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/snes/examples/tutorials/ex10d/ex10.c
/petsc/src/snes/examples/tutorials/ex15.c
/petsc/src/snes/examples/tutorials/ex30.c
/petsc/src/snes/examples/tutorials/output/ex62_43.out
/petsc/src/snes/examples/tutorials/output/ex62_45.out
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/gs/snesgs.c
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/impls/richardson/snesrichardson.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesregi.c
/petsc/src/snes/interface/snesut.c
/petsc/src/snes/linesearch/impls/bt/linesearchbt.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/sys/random/examples/tutorials/ex2.c
/petsc/src/ts/characteristic/examples/tutorials/ex1.c
/petsc/src/ts/characteristic/examples/tutorials/ex2.c
/petsc/src/ts/characteristic/examples/tutorials/ex4.c
dbb482c722-Mar-2012 Barry Smith <bsmith@mcs.anl.gov>

two indpendent fixes: Linus will not like me
1) cleaned up use of afterimage to produce .gif files and or movies from PetscDraw for X windows
2) fixed bugs in petsc viewer for binary files that are

two indpendent fixes: Linus will not like me
1) cleaned up use of afterimage to produce .gif files and or movies from PetscDraw for X windows
2) fixed bugs in petsc viewer for binary files that are also called for sockets but gave incorrect reads and hence subtle errors

Hg-commit: 349a8af9d47d3d5eab27b651e8772016c0e7ff6b

show more ...


/petsc/bin/matlab/@PetscOpenSocket/read.m
/petsc/include/petscdraw.h
/petsc/src/ksp/pc/examples/tests/ex5.c
/petsc/src/sys/draw/drawimpl.h
/petsc/src/sys/draw/impls/x/xinit.c
/petsc/src/sys/draw/impls/x/xops.c
/petsc/src/sys/draw/interface/draw.c
/petsc/src/sys/draw/interface/drawreg.c
/petsc/src/sys/draw/interface/drect.c
/petsc/src/sys/viewer/impls/binary/binv.c
/petsc/src/sys/viewer/impls/socket/matlab/bread.c
91f9b90622-Mar-2012 Satish Balay <balay@mcs.anl.gov>

fix cmake/absoft f90 build

Hg-commit: c66ce3bdd321c518ab670d430482c1f7a79c15ad


/petsc/.hgignore
Configure.py
/petsc/config/builder.py
/petsc/include/finclude/petscsnes.h
/petsc/include/petscdmmesh.h
/petsc/include/petscsnes.h
/petsc/include/private/linesearchimpl.h
/petsc/include/private/petscimpl.h
/petsc/include/private/snesimpl.h
/petsc/include/private/vecimpl.h
/petsc/include/sieve/ISieve.hh
/petsc/src/dm/impls/complex/complex.c
/petsc/src/dm/impls/complex/ctetgen.c
/petsc/src/dm/impls/mesh/mesh.c
/petsc/src/ksp/ksp/examples/tests/ex33.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/pc/examples/tests/ex5.c
/petsc/src/snes/examples/tutorials/ex10d/ex10.c
/petsc/src/snes/examples/tutorials/ex15.c
/petsc/src/snes/examples/tutorials/ex30.c
/petsc/src/snes/examples/tutorials/output/ex62_43.out
/petsc/src/snes/examples/tutorials/output/ex62_45.out
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/gs/snesgs.c
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/impls/richardson/snesrichardson.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesregi.c
/petsc/src/snes/interface/snesut.c
/petsc/src/snes/linesearch/impls/bt/linesearchbt.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/sys/random/examples/tutorials/ex2.c
/petsc/src/ts/characteristic/examples/tutorials/ex1.c
/petsc/src/ts/characteristic/examples/tutorials/ex2.c
/petsc/src/ts/characteristic/examples/tutorials/ex4.c
b4d43a9f20-Mar-2012 Sean Farley <sean@mcs.anl.gov>

metis: update both packages to newest patched version which addresses the __thread issue

Hg-commit: 7d27e5d2ba94577543eab68ca07ab72e00411102


/petsc/bin/maint/generateetags.py
/petsc/bin/matlab/@PetscOpenSocket/PetscOpenSocket.m
/petsc/bin/matlab/@PetscOpenSocket/read.m
/petsc/conf/rules
packages/metis.py
packages/parmetis.py
/petsc/config/builder.py
/petsc/config/cmakeboot.py
/petsc/config/cmakegen.py
/petsc/config/configure.py
/petsc/include/finclude/ftn-custom/petscdmmesh.h90
/petsc/include/finclude/petscdraw.h
/petsc/include/finclude/petscpc.h
/petsc/include/finclude/petscpcdef.h
/petsc/include/finclude/petscsnes.h
/petsc/include/finclude/petscsnesdef.h
/petsc/include/petscdmcomplex.h
/petsc/include/petscdmmesh.h
/petsc/include/petscdraw.h
/petsc/include/petscksp.h
/petsc/include/petsclog.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/include/petscsnes.h
/petsc/include/petscsys.h
/petsc/include/petsctime.h
/petsc/include/petscvec.h
/petsc/include/private/compleximpl.h
/petsc/include/private/kspimpl.h
/petsc/include/private/linesearchimpl.h
/petsc/include/private/logimpl.h
/petsc/include/private/snesimpl.h
/petsc/include/private/vecimpl.h
/petsc/makefile
/petsc/src/benchmarks/streams/PthreadVersion.c
/petsc/src/dm/impls/complex/complex.c
/petsc/src/dm/impls/complex/complexcreate.c
/petsc/src/dm/impls/complex/ctetgen.c
/petsc/src/dm/impls/complex/examples/tests/ex1.c
/petsc/src/dm/impls/complex/examples/tests/output/ex1_0.out
/petsc/src/dm/impls/complex/examples/tests/output/ex1_1.out
/petsc/src/dm/impls/complex/makefile
/petsc/src/dm/impls/complex/predicates.c
/petsc/src/dm/impls/mesh/f90-custom/zmeshf90.c
/petsc/src/dm/impls/mesh/ftn-custom/zmesh.c
/petsc/src/dm/impls/mesh/mesh.c
/petsc/src/dm/impls/mesh/meshexodus.c
/petsc/src/dm/impls/mesh/section.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/website/documentation/changes/32.html
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/index.html
/petsc/src/docs/website/style.css
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tutorials/ex10.c
/petsc/src/ksp/ksp/examples/tutorials/ex25.c
/petsc/src/ksp/ksp/examples/tutorials/ex28.c
/petsc/src/ksp/ksp/examples/tutorials/ex29.c
/petsc/src/ksp/ksp/examples/tutorials/ex31.c
/petsc/src/ksp/ksp/examples/tutorials/ex32.c
/petsc/src/ksp/ksp/examples/tutorials/ex34.c
/petsc/src/ksp/ksp/examples/tutorials/ex42-fsschur.opts
/petsc/src/ksp/ksp/examples/tutorials/ex42-mgschur.opts
/petsc/src/ksp/ksp/examples/tutorials/ex42-mgschur_nestedfs.opts
/petsc/src/ksp/ksp/examples/tutorials/ex45.c
/petsc/src/ksp/ksp/examples/tutorials/ex45f.F
/petsc/src/ksp/ksp/examples/tutorials/ex50.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex25_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex25_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex50_2.out
/petsc/src/ksp/ksp/interface/dmksp.c
/petsc/src/ksp/ksp/interface/ftn-custom/makefile
/petsc/src/ksp/ksp/interface/ftn-custom/zdmkspf.c
/petsc/src/ksp/ksp/interface/ftn-custom/zitfuncf.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/ksp/ksp/interface/iterativ.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/interface/makefile
/petsc/src/ksp/pc/impls/ainvcusp/ainvcusp.cu
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/sacusp/sacusp.cu
/petsc/src/ksp/pc/impls/shell/ftn-custom/zshellpcf.c
/petsc/src/ksp/pc/impls/shell/shellpc.c
/petsc/src/ksp/pc/impls/tfs/bitmask.c
/petsc/src/ksp/pc/impls/tfs/comm.c
/petsc/src/ksp/pc/impls/tfs/gs.c
/petsc/src/ksp/pc/impls/tfs/ivec.c
/petsc/src/ksp/pc/impls/tfs/tfs.h
/petsc/src/ksp/pc/impls/tfs/xxt.c
/petsc/src/ksp/pc/impls/tfs/xyt.c
/petsc/src/mat/examples/tests/ex37.c
/petsc/src/mat/impls/aij/mpi/mmaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/inode.c
/petsc/src/mat/impls/aij/seq/inode2.c
/petsc/src/mat/impls/aij/seq/seqpthread/seqaijpthread.c
/petsc/src/mat/impls/aij/seq/seqpthread/seqaijpthread.h
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/ij/matij.c
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/utils/axpy.c
/petsc/src/snes/examples/tutorials/ex15.c
/petsc/src/snes/examples/tutorials/ex1f.F
/petsc/src/snes/examples/tutorials/ex3.c
/petsc/src/snes/examples/tutorials/ex39f90.F
/petsc/src/snes/examples/tutorials/ex52.c
/petsc/src/snes/examples/tutorials/ex62.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex62_18.out
/petsc/src/snes/examples/tutorials/output/ex62_19.out
/petsc/src/snes/examples/tutorials/output/ex62_20.out
/petsc/src/snes/examples/tutorials/output/ex62_21.out
/petsc/src/snes/examples/tutorials/output/ex62_22.out
/petsc/src/snes/examples/tutorials/output/ex62_23.out
/petsc/src/snes/examples/tutorials/output/ex62_24.out
/petsc/src/snes/examples/tutorials/output/ex62_25.out
/petsc/src/snes/examples/tutorials/output/ex62_26.out
/petsc/src/snes/examples/tutorials/output/ex62_27.out
/petsc/src/snes/examples/tutorials/output/ex62_28.out
/petsc/src/snes/examples/tutorials/output/ex62_29.out
/petsc/src/snes/examples/tutorials/output/ex62_30.out
/petsc/src/snes/examples/tutorials/output/ex62_31.out
/petsc/src/snes/examples/tutorials/output/ex62_32.out
/petsc/src/snes/examples/tutorials/output/ex62_33.out
/petsc/src/snes/examples/tutorials/output/ex62_34.out
/petsc/src/snes/examples/tutorials/output/ex62_36.out
/petsc/src/snes/examples/tutorials/output/ex62_37.out
/petsc/src/snes/examples/tutorials/output/ex62_38.out
/petsc/src/snes/examples/tutorials/output/ex62_39.out
/petsc/src/snes/examples/tutorials/output/ex62_40.out
/petsc/src/snes/examples/tutorials/output/ex62_41.out
/petsc/src/snes/examples/tutorials/output/ex62_42.out
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/fas/fasimpls.h
/petsc/src/snes/impls/ls/ls.c
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/ngmres/snesngmres.h
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/impls/richardson/snesrichardson.c
/petsc/src/snes/impls/vi/makefile
/petsc/src/snes/impls/vi/rs/virs.c
/petsc/src/snes/impls/vi/ss/viss.c
/petsc/src/snes/impls/vi/vi.c
/petsc/src/snes/impls/vi/viimpl.h
/petsc/src/snes/interface/dlregissnes.c
/petsc/src/snes/interface/ftn-custom/makefile
/petsc/src/snes/interface/ftn-custom/zsnesf.c
/petsc/src/snes/interface/makefile
/petsc/src/snes/interface/noise/snesdnest.c
/petsc/src/snes/interface/noise/snesnoise.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/linesearch/impls/basic/linesearchbasic.c
/petsc/src/snes/linesearch/impls/bt/linesearchbt.c
/petsc/src/snes/linesearch/impls/cp/linesearchcp.c
/petsc/src/snes/linesearch/impls/l2/linesearchl2.c
/petsc/src/snes/linesearch/impls/shell/ftn-custom/zlinesearchshellf.c
/petsc/src/snes/linesearch/impls/shell/linesearchshell.c
/petsc/src/snes/linesearch/interface/ftn-custom/zlinesearchf.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/snes/linesearch/interface/linesearchregi.c
/petsc/src/snes/linesearch/makefile
/petsc/src/snes/utils/dmsnes.c
/petsc/src/sys/dll/dl.c
/petsc/src/sys/dll/reg.c
/petsc/src/sys/draw/impls/win32/win32draw.c
/petsc/src/sys/draw/impls/x/xinit.c
/petsc/src/sys/draw/impls/x/xops.c
/petsc/src/sys/draw/interface/dmouse.c
/petsc/src/sys/draw/interface/draw.c
/petsc/src/sys/draw/utils/axisc.c
/petsc/src/sys/draw/utils/axisimpl.h
/petsc/src/sys/draw/utils/dscatter.c
/petsc/src/sys/draw/utils/hists.c
/petsc/src/sys/draw/utils/lg.c
/petsc/src/sys/draw/utils/lgc.c
/petsc/src/sys/draw/utils/zoom.c
/petsc/src/sys/fileio/mprint.c
/petsc/src/sys/fileio/mprint.h
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/objects/pthread/lockfree.c
/petsc/src/sys/objects/pthread/makefile
/petsc/src/sys/objects/pthread/nopool.c
/petsc/src/sys/objects/pthread/pthread.c
/petsc/src/sys/objects/pthread/pthreadimpl.h
/petsc/src/sys/objects/pthread/pthreadpool_chain.c
/petsc/src/sys/objects/pthread/pthreadpool_main.c
/petsc/src/sys/objects/pthread/pthreadpool_tree.c
/petsc/src/sys/objects/pthread/pthreadpool_true.c
/petsc/src/sys/plog/plog.c
/petsc/src/sys/plog/utils/classLog.c
/petsc/src/sys/plog/utils/eventLog.c
/petsc/src/sys/plog/utils/stageLog.c
/petsc/src/sys/sf/sf.c
/petsc/src/sys/viewer/impls/ascii/filev.c
/petsc/src/sys/viewer/impls/socket/matlab/bread.c
/petsc/src/sys/viewer/impls/socket/matlab/makefile
/petsc/src/ts/examples/tutorials/ex9.c
/petsc/src/vec/is/utils/isdiff.c
/petsc/src/vec/vec/examples/tests/ex28.c
/petsc/src/vec/vec/examples/tests/ex42.c
/petsc/src/vec/vec/examples/tests/makefile
/petsc/src/vec/vec/examples/tests/output/ex37_2.out
/petsc/src/vec/vec/impls/mpi/mpipthread/makefile
/petsc/src/vec/vec/impls/mpi/mpipthread/mpivecpthread.c
/petsc/src/vec/vec/impls/mpi/pmap.c
/petsc/src/vec/vec/impls/seq/seqpthread/tmap.c
/petsc/src/vec/vec/impls/seq/seqpthread/vecpthread.c
/petsc/src/vec/vec/impls/seq/seqpthread/vecpthreadimpl.h
/petsc/src/vec/vec/interface/dlregisvec.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/comb.c
/petsc/tutorials/multiphysics/makefile
c454683620-Mar-2012 Jed Brown <jed@59A2.org>

Update FFTW download

Hg-commit: e7023ed1205ee115f9a27391097268d128e0e72b


packages/fftw.py
/petsc/include/petscversion.h
/petsc/src/dm/impls/da/fdda.c
/petsc/src/docs/website/download/index.html
/petsc/src/sys/objects/options.c
d32e318816-Mar-2012 Satish Balay <balay@mcs.anl.gov>

fix metis build on opensolaris

Hg-commit: 7b63204824bd5a6f4a31b39543d615adc7fa5516


packages/metis.py
c75df4bc16-Mar-2012 Satish Balay <balay@mcs.anl.gov>

update to latest cmake

Hg-commit: 02503143e73ebeba830a4fc585bd253f1072cf1c


packages/cmake.py
/petsc/include/finclude/petscsnesdef.h
/petsc/include/petscsnes.h
/petsc/include/private/linesearchimpl.h
/petsc/src/dm/interface/dm.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/snes/examples/tutorials/ex15.c
/petsc/src/snes/examples/tutorials/ex1f.F
/petsc/src/snes/examples/tutorials/ex3.c
/petsc/src/snes/examples/tutorials/ex39f90.F
/petsc/src/snes/impls/vi/makefile
/petsc/src/snes/impls/vi/rs/virs.c
/petsc/src/snes/impls/vi/ss/viss.c
/petsc/src/snes/impls/vi/vi.c
/petsc/src/snes/impls/vi/viimpl.h
/petsc/src/snes/interface/ftn-custom/zsnesf.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/linesearch/impls/basic/linesearchbasic.c
/petsc/src/snes/linesearch/impls/bt/linesearchbt.c
/petsc/src/snes/linesearch/impls/cp/linesearchcp.c
/petsc/src/snes/linesearch/impls/l2/linesearchl2.c
/petsc/src/snes/linesearch/impls/shell/ftn-custom/makefile
/petsc/src/snes/linesearch/impls/shell/ftn-custom/zlinesearchshellf.c
/petsc/src/snes/linesearch/interface/ftn-custom/makefile
/petsc/src/snes/linesearch/interface/ftn-custom/zlinesearchf.c
/petsc/src/snes/linesearch/interface/linesearch.c
040257f216-Mar-2012 Jed Brown <jed@59A2.org>

Update generation of PETScConfig.cmake, remove /usr/local/include because FreeBSD does not find it by default

Hg-commit: 5b69421d6124b43c56dcf7a5563538e2c3076b3f


Configure.py
/petsc/include/petscdm.h
/petsc/include/private/dmimpl.h
/petsc/src/dm/impls/complex/complex.c
/petsc/src/dm/impls/complex/complexcreate.c
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/interface/dm.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex28_3.out
/petsc/src/snes/examples/tutorials/output/ex28_4.out
b8859c2416-Mar-2012 Jed Brown <jed@59A2.org>

X.py: pkg.include should not have '-I' in the name

Hg-commit: a267a0809fb5b81a8a4c27a6f39e11792790466a


packages/X.py
cdb3745316-Mar-2012 Jed Brown <jed@59A2.org>

Enable MUMPS, SCALAPACK, and BLACS on Windows because user Pham Van <pham_ha@yahoo.com> reports that it works

Hg-commit: a84104ee1744756d16c49ade9b1215813e595674


/petsc/bin/maint/generateetags.py
packages/MUMPS.py
packages/SCALAPACK.py
packages/blacs.py
/petsc/include/petscis.h
/petsc/src/dm/impls/redundant/dmredundant.c
/petsc/src/dm/interface/dm.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex25_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex43_3.out
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/snes/examples/tutorials/ex15.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex15_1.out
/petsc/src/snes/examples/tutorials/output/ex15_2.out
/petsc/src/snes/examples/tutorials/output/ex18_1.out
/petsc/src/snes/examples/tutorials/output/ex28_0.out
/petsc/src/snes/examples/tutorials/output/ex28_1.out
/petsc/src/snes/examples/tutorials/output/ex28_2.out
/petsc/src/snes/examples/tutorials/output/ex48_1.out
/petsc/src/snes/examples/tutorials/output/ex48_2.out
/petsc/src/snes/examples/tutorials/output/ex48_3.out
/petsc/src/snes/examples/tutorials/output/ex48_4.out
/petsc/src/snes/examples/tutorials/output/ex5_1.out
/petsc/src/snes/examples/tutorials/output/ex5_2.out
/petsc/src/snes/examples/tutorials/output/ex5_3.out
/petsc/src/snes/examples/tutorials/output/ex5_4.out
/petsc/src/snes/examples/tutorials/output/ex5_6.out
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/tutorials/multiphysics/makefile
/petsc/tutorials/multiphysics/output/mp_5.out
/petsc/tutorials/multiphysics/output/mp_8.out
/petsc/tutorials/multiphysics/output/mp_9.out
968a269116-Mar-2012 Satish Balay <balay@mcs.anl.gov>

get the nightly builds going

Hg-commit: 035633be7d6c4ea890046b6b8e0f0febee75af1c


/petsc/conf/rules
packages/Prometheus.py
/petsc/include/petscsnes.h
/petsc/include/private/linesearchimpl.h
/petsc/include/private/snesimpl.h
/petsc/makefile
/petsc/src/snes/examples/tutorials/ex15.c
/petsc/src/snes/examples/tutorials/ex3.c
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/fas/fasimpls.h
/petsc/src/snes/impls/ls/ls.c
/petsc/src/snes/impls/ls/lsimpl.h
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/impls/ncg/snesncgimpl.h
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/ngmres/snesngmres.h
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/impls/richardson/snesrichardson.c
/petsc/src/snes/impls/richardson/snesrichardsonimpl.h
/petsc/src/snes/interface/snes.c
/petsc/src/snes/linesearch/impls/shell/linesearchshell.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/snes/linesearch/interface/linesearchregi.c
/petsc/src/sys/objects/pthread/lockfree.c
/petsc/src/sys/objects/pthread/nopool.c
/petsc/src/sys/objects/pthread/pthreadpool_chain.c
/petsc/src/sys/objects/pthread/pthreadpool_main.c
/petsc/src/sys/objects/pthread/pthreadpool_tree.c
/petsc/src/sys/objects/pthread/pthreadpool_true.c
309df62915-Mar-2012 Satish Balay <balay@mcs.anl.gov>

remove workarround code that adds cmake to PATH [and directly invoke
cmake set by configure]

Hg-commit: be0162813bffa633e2e13c33607e00a50227f18d


packages/cmake.py
packages/metis.py
packages/parmetis.py
/petsc/config/cmakeboot.py
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/impls/aij/mpi/mpiaij.h
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/aij/seq/seqpthread/seqaijpthread.c
/petsc/src/mat/impls/aij/seq/seqpthread/seqaijpthread.h
9334defc15-Mar-2012 Satish Balay <balay@mcs.anl.gov>

merge from 32

Hg-commit: 4428540858c38abfd8f7e013d605344901df49ff


packages/afterimage.py
packages/imagemagick.py
/petsc/include/petscversion.h
/petsc/src/dm/impls/da/fdda.c
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/download/index.html
/petsc/src/ksp/pc/impls/gamg/tools.c
/petsc/src/sys/draw/impls/x/xinit.c
4a3893bb15-Mar-2012 Satish Balay <balay@mcs.anl.gov>

update mumps tarball [merge prior patches with Sean's]

Hg-commit: ce1d5480147357dd18bc60a61d3dfa6b6f2c32f1


/petsc/bin/maint/confignightly/steamroller3
packages/MUMPS.py
/petsc/config/builder.py
/petsc/config/examples/arch-linux-mpich1.py
/petsc/include/finclude/petscsys.h
/petsc/include/petscdmcomplex.h
/petsc/include/petsclinesearch.h
/petsc/include/petscsys.h
/petsc/include/private/fortranimpl.h
/petsc/include/private/linesearchimpl.h
/petsc/src/dm/impls/complex/complex.c
/petsc/src/dm/impls/complex/examples/tests/ex1.c
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/fas/fasimpls.h
/petsc/src/snes/impls/ls/ls.c
/petsc/src/snes/impls/ls/lsimpl.h
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/impls/ncg/snesncgimpl.h
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/ngmres/snesngmres.h
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/impls/richardson/snesrichardson.c
/petsc/src/snes/impls/richardson/snesrichardsonimpl.h
/petsc/src/snes/impls/test/snestest.c
/petsc/src/snes/interface/dlregissnes.c
/petsc/src/snes/linesearch/impls/basic/linesearchbasic.c
/petsc/src/snes/linesearch/impls/bt/linesearchbt.c
/petsc/src/snes/linesearch/impls/bt/makefile
/petsc/src/snes/linesearch/impls/cp/linesearchcp.c
/petsc/src/snes/linesearch/impls/l2/linesearchl2.c
/petsc/src/snes/linesearch/impls/makefile
/petsc/src/snes/linesearch/impls/shell/linesearchshell.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/snes/linesearch/interface/linesearchregi.c
/petsc/src/sys/f90-src/f90_cwrap.c
/petsc/src/sys/fsrc/somefort.F
/petsc/src/sys/ftn-custom/zstartf.c
/petsc/src/sys/ftn-custom/zutils.c
/petsc/src/sys/objects/ftn-custom/zoptionsf.c
/petsc/src/sys/objects/options.c
/petsc/src/sys/viewer/impls/vtk/ftn-custom/makefile
/petsc/src/sys/viewer/impls/vtk/ftn-custom/zvtkvf.c
/petsc/src/ts/impls/arkimex/arkimex.c
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/vec/is/interface/f90-custom/zindexf90.c
d63f7f1d14-Mar-2012 Satish Balay <balay@mcs.anl.gov>

#109130 __thread in parmetis breaks with some compilers. So instead of
selectively disabling it - change to *always* disable.

Hg-commit: 5502346cf582b8e3dcde72dd30c224744c0dc53c


packages/metis.py
packages/parmetis.py
/petsc/config/builder.py
/petsc/src/dm/impls/complex/complex.c
/petsc/src/dm/impls/complex/examples/tests/ex1.c
/petsc/src/ksp/ksp/utils/schurm.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/sys/bag/bag.c
/petsc/src/ts/interface/ftn-custom/ztsf.c
/petsc/src/vec/vec/impls/seq/vsection.c
fc7c747313-Mar-2012 Matthew G Knepley <knepley@gmail.com>

Check for Clang compiler when adding workaround flag to Metis

Hg-commit: 4f41d3f98a2992dcf3acc7403884bcbc1c1a19a8


/petsc/bin/maint/generateetags.py
/petsc/bin/matlab/PetscBagRead.m
/petsc/bin/matlab/PetscBinaryRead.m
packages/metis.py
/petsc/config/builder.py
/petsc/include/petscdmcomplex.h
/petsc/include/petscerror.h
/petsc/include/petscmath.h
/petsc/src/dm/impls/complex/complex.c
/petsc/src/dm/impls/complex/complexcreate.c
/petsc/src/dm/impls/complex/examples/tests/ex1.c
/petsc/src/dm/impls/complex/examples/tests/predicates.c
/petsc/src/dm/impls/da/fdda.c
/petsc/src/dm/impls/mesh/mesh.c
/petsc/src/dm/impls/shell/dmshell.c
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/ksp/ksp/utils/schurm.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/galerkin/galerkin.c
/petsc/src/ksp/pc/impls/lsc/lsc.c
/petsc/src/mat/coarsen/impls/hem/hem.c
/petsc/src/mat/examples/tests/ex94.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/impls/fft/fftw/fftw.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tutorials/ex52.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/impls/vi/rsaug/virsaug.c
/petsc/src/snes/interface/snes.c
/petsc/src/sys/bag/bag.c
/petsc/src/sys/sf/sf.c
/petsc/src/ts/interface/ts.c
41dabd5209-Mar-2012 Satish Balay <balay@mcs.anl.gov>

update hypre tarball with local patches

Hg-commit: ab0cd5d90c4eedc54323f55a6b78ef832cf57879


packages/hypre.py
4ddd07fc09-Mar-2012 Jed Brown <jed@59A2.org>

Update Hypre to 2.8.0b and add support for 64-bit int

Hg-commit: 5d03e530c1f830fb05b572b0b2d592af05604486


/petsc/bin/matlab/classes/PetscDM.m
/petsc/bin/matlab/classes/examples/tutorials/exSNES_DVI.m
/petsc/bin/matlab/classes/examples/tutorials/exSNES_DVI2.m
/petsc/bin/matlab/classes/matlabheader.h
/petsc/conf/rules
packages/hypre.py
/petsc/config/builder.py
/petsc/config/builder2.py
/petsc/include/petscdmcomplex.h
/petsc/include/petscdmmesh.h
/petsc/include/petsclinesearch.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/include/petscsnes.h
/petsc/include/petscvec.h
/petsc/include/private/linesearchimpl.h
/petsc/include/private/snesimpl.h
/petsc/include/private/vecimpl.h
/petsc/include/sieve/Mesh.hh
/petsc/include/sieve/Partitioner.hh
/petsc/src/benchmarks/streams/makefile
/petsc/src/contrib/fun3d/comp/flow.c
/petsc/src/contrib/fun3d/incomp/flow.c
/petsc/src/contrib/keyes/ex15.c
/petsc/src/dm/examples/tests/ex23.c
/petsc/src/dm/examples/tests/makefile
/petsc/src/dm/impls/complex/complex.c
/petsc/src/dm/impls/da/dainterp.c
/petsc/src/dm/impls/da/gr2.c
/petsc/src/dm/impls/da/hypre/mhyp.c
/petsc/src/dm/impls/mesh/examples/tests/makefile
/petsc/src/dm/impls/mesh/ftn-custom/zmesh.c
/petsc/src/dm/impls/mesh/mesh.c
/petsc/src/dm/impls/mesh/meshexodus.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/manual/developers.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/ksp/examples/tests/ex14.c
/petsc/src/ksp/ksp/examples/tests/ex19.c
/petsc/src/ksp/ksp/examples/tests/ex26.c
/petsc/src/ksp/ksp/examples/tests/ex29.c
/petsc/src/ksp/ksp/examples/tutorials/ex14f.F
/petsc/src/ksp/ksp/examples/tutorials/ex38.c
/petsc/src/ksp/ksp/examples/tutorials/ex43.c
/petsc/src/ksp/ksp/examples/tutorials/ex5.c
/petsc/src/ksp/ksp/examples/tutorials/ex54.c
/petsc/src/ksp/ksp/examples/tutorials/ex55.c
/petsc/src/ksp/ksp/examples/tutorials/ex56.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/utils/schurm.c
/petsc/src/ksp/pc/impls/asa/asa.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/gamg.h
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/gamg/tools.c
/petsc/src/ksp/pc/impls/hypre/hypre.c
/petsc/src/ksp/pc/impls/wb/wb.c
/petsc/src/mat/coarsen/impls/hem/hem.c
/petsc/src/mat/coarsen/impls/mis/mis.c
/petsc/src/mat/examples/tests/ex110.c
/petsc/src/mat/examples/tests/ex12.c
/petsc/src/mat/examples/tests/ex159.c
/petsc/src/mat/examples/tests/ex16.c
/petsc/src/mat/examples/tests/ex16f90.F
/petsc/src/mat/examples/tests/ex19.c
/petsc/src/mat/examples/tests/ex2.c
/petsc/src/mat/examples/tests/ex25.c
/petsc/src/mat/examples/tests/ex30.c
/petsc/src/mat/examples/tests/ex31.c
/petsc/src/mat/examples/tests/ex37.c
/petsc/src/mat/examples/tests/ex48.c
/petsc/src/mat/examples/tests/ex51.c
/petsc/src/mat/examples/tests/ex52.c
/petsc/src/mat/examples/tests/ex54.c
/petsc/src/mat/examples/tests/ex55.c
/petsc/src/mat/examples/tests/ex56.c
/petsc/src/mat/examples/tests/ex58.c
/petsc/src/mat/examples/tests/ex59.c
/petsc/src/mat/examples/tests/ex60.c
/petsc/src/mat/examples/tests/ex7.c
/petsc/src/mat/examples/tests/ex73.c
/petsc/src/mat/examples/tests/ex75.c
/petsc/src/mat/examples/tests/ex95.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex95_2.out
/petsc/src/mat/examples/tutorials/ex17.c
/petsc/src/mat/impls/aij/aij/aijtype.c
/petsc/src/mat/impls/aij/mpi/ftn-custom/zmpiaijf.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpicusp/mpiaijcusp.cu
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/seqcusp/aijcusp.cu
/petsc/src/mat/impls/aij/seq/seqpthread/makefile
/petsc/src/mat/impls/aij/seq/seqpthread/seqaijpthread.c
/petsc/src/mat/impls/aij/seq/seqpthread/seqaijpthread.h
/petsc/src/mat/impls/baij/mpi/ftn-custom/zmpibaijf.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/dense/mpi/ftn-custom/zmpidensef.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/ij/matij.c
/petsc/src/mat/impls/maij/maij.c
/petsc/src/mat/impls/sbaij/mpi/ftn-custom/zmpisbaijf.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/utils/gcreate.c
/petsc/src/snes/examples/tests/ex11.c
/petsc/src/snes/examples/tests/ex12f.F
/petsc/src/snes/examples/tests/ex14f.F
/petsc/src/snes/examples/tests/ex5.c
/petsc/src/snes/examples/tutorials/ex10.c
/petsc/src/snes/examples/tutorials/ex15.c
/petsc/src/snes/examples/tutorials/ex21.c
/petsc/src/snes/examples/tutorials/ex22.c
/petsc/src/snes/examples/tutorials/ex25.c
/petsc/src/snes/examples/tutorials/ex28.c
/petsc/src/snes/examples/tutorials/ex30.c
/petsc/src/snes/examples/tutorials/ex31.c
/petsc/src/snes/examples/tutorials/ex35.c
/petsc/src/snes/examples/tutorials/ex48.c
/petsc/src/snes/examples/tutorials/ex52.c
/petsc/src/snes/examples/tutorials/ex58.c
/petsc/src/snes/examples/tutorials/ex59.c
/petsc/src/snes/examples/tutorials/ex5s.c
/petsc/src/snes/examples/tutorials/ex61view.c
/petsc/src/snes/examples/tutorials/ex62.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex5_5_fas_additive.out
/petsc/src/snes/examples/tutorials/output/ex5_5_ls.out
/petsc/src/snes/examples/tutorials/output/ex5_5_ncg.out
/petsc/src/snes/examples/tutorials/output/ex5_5_ngmres.out
/petsc/src/snes/examples/tutorials/output/ex5_5_ngmres_ngs.out
/petsc/src/snes/examples/tutorials/output/ex5_5_ngmres_richardson.out
/petsc/src/snes/examples/tutorials/output/ex5_5_nrichardson.out
/petsc/src/snes/examples/tutorials/output/ex5_5_qn.out
/petsc/src/snes/examples/tutorials/output/ex62_37.out
/petsc/src/snes/examples/tutorials/output/ex62_38.out
/petsc/src/snes/examples/tutorials/output/ex62_39.out
/petsc/src/snes/examples/tutorials/output/ex62_40.out
/petsc/src/snes/examples/tutorials/output/ex62_41.out
/petsc/src/snes/examples/tutorials/output/ex62_42.out
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/fas/fasimpls.h
/petsc/src/snes/impls/ksponly/ksponly.c
/petsc/src/snes/impls/ls/ls.c
/petsc/src/snes/impls/ms/ms.c
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/impls/ncg/snesncgimpl.h
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/ngmres/snesngmres.h
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/impls/richardson/snesrichardson.c
/petsc/src/snes/impls/richardson/snesrichardsonimpl.h
/petsc/src/snes/impls/test/snestest.c
/petsc/src/snes/impls/tr/tr.c
/petsc/src/snes/impls/vi/ss/viss.c
/petsc/src/snes/impls/vi/vi.c
/petsc/src/snes/interface/dlregissnes.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesls.c
/petsc/src/snes/linesearch/impls/basic/basicimpls.h
/petsc/src/snes/linesearch/impls/basic/linesearchbasic.c
/petsc/src/snes/linesearch/impls/basic/makefile
/petsc/src/snes/linesearch/impls/cp/linesearchcp.c
/petsc/src/snes/linesearch/impls/cp/makefile
/petsc/src/snes/linesearch/impls/l2/l2impls.h
/petsc/src/snes/linesearch/impls/l2/linesearchl2.c
/petsc/src/snes/linesearch/impls/l2/makefile
/petsc/src/snes/linesearch/impls/makefile
/petsc/src/snes/linesearch/impls/shell/linesearchshell.c
/petsc/src/snes/linesearch/impls/shell/makefile
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/snes/linesearch/interface/linesearchregi.c
/petsc/src/snes/linesearch/interface/makefile
/petsc/src/snes/linesearch/makefile
/petsc/src/snes/makefile
/petsc/src/snes/utils/damgsnes.c
/petsc/src/snes/utils/dmdasnes.c
/petsc/src/snes/utils/dmsnes.c
/petsc/src/snes/utils/makefile
/petsc/src/sys/objects/inherit.c
/petsc/src/sys/objects/pthread/lockfree.c
/petsc/src/sys/objects/pthread/nopool.c
/petsc/src/sys/objects/pthread/pthread.c
/petsc/src/sys/objects/pthread/pthreadimpl.h
/petsc/src/sys/objects/pthread/pthreadpool_chain.c
/petsc/src/sys/objects/pthread/pthreadpool_main.c
/petsc/src/sys/objects/pthread/pthreadpool_tree.c
/petsc/src/sys/objects/pthread/pthreadpool_true.c
/petsc/src/sys/sf/makefile
/petsc/src/sys/viewer/examples/makefile
/petsc/src/sys/viewer/impls/vtk/vtkv.c
/petsc/src/ts/examples/tutorials/ex10.c
/petsc/src/ts/examples/tutorials/ex14.c
/petsc/src/ts/examples/tutorials/ex18.c
/petsc/src/ts/examples/tutorials/ex22.c
/petsc/src/ts/examples/tutorials/ex22f_mf.F90
/petsc/src/ts/examples/tutorials/ex25.c
/petsc/src/ts/examples/tutorials/ex8.c
/petsc/src/vec/vec/impls/mpi/mpipthread/mpivecpthread.c
/petsc/src/vec/vec/impls/mpi/pmap.c
/petsc/src/vec/vec/impls/seq/seqpthread/makefile
/petsc/src/vec/vec/impls/seq/seqpthread/tmap.c
/petsc/src/vec/vec/impls/seq/seqpthread/vecpthread.c
/petsc/src/vec/vec/impls/seq/seqpthread/vecpthreadimpl.h
/petsc/src/vec/vec/interface/vector.c
7dbde84803-Mar-2012 Jed Brown <jed@59A2.org>

Fixes for libAfterImage compilation, ImageMagick is still just a stub

Hg-commit: fb79e104b74267c74aa64f125e7eb6a64bce4b14


packages/afterimage.py
packages/imagemagick.py
/petsc/include/petscversion.h
/petsc/src/docs/website/documentation/changes/32.html
/petsc/src/docs/website/download/index.html
/petsc/src/docs/website/style.css
/petsc/src/ksp/pc/impls/pbjacobi/pbjacobi.c
/petsc/src/mat/examples/tests/ex73.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/seq/crl/crl.c
/petsc/src/mat/impls/fft/fftw/fftw.c
/petsc/src/mat/impls/sbaij/seq/relax.h
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/utils/adutils/damgsnesad.c
/petsc/src/sys/draw/impls/x/xinit.c
/petsc/src/vec/vec/impls/mpi/mpicusp/mpicusp.cu
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/interface/rvector.c
954a84d001-Mar-2012 Sean Farley <sean@mcs.anl.gov>

parmetis: fix cflags string to escape quote

Hg-commit: d33f3ccece60317183d74292b21fdf2390c952ee


packages/parmetis.py
f064ce5401-Mar-2012 Sean Farley <sean@mcs.anl.gov>

metis: fix cflags string to escape quote

Hg-commit: 6a8e32e4e93d9e40790f8923c6a73907872bf458


packages/metis.py
/petsc/include/petscdm.h
/petsc/include/petscdmmg.h
/petsc/include/petscdmshell.h
/petsc/include/petscdmsliced.h
/petsc/include/private/dmimpl.h
/petsc/src/dm/impls/complex/complexcreate.c
/petsc/src/dm/impls/iga/igacreate.c
/petsc/src/dm/impls/makefile
/petsc/src/dm/impls/mesh/meshcreate.c
/petsc/src/dm/impls/shell/dmshell.c
/petsc/src/dm/impls/shell/makefile
/petsc/src/dm/impls/sliced/sliced.c
/petsc/src/dm/interface/dmregall.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/mat/impls/aij/mpi/mpiptap.c
/petsc/src/mat/impls/aij/seq/seqpthread/seqaijpthread.c
/petsc/src/snes/utils/damgsnes.c
/petsc/src/sys/objects/pthread/pthread.c
/petsc/src/ts/examples/tutorials/ex8.c
/petsc/src/ts/examples/tutorials/ex9.c
/petsc/src/vec/vec/impls/mpi/pmap.c
5d74ee1829-Feb-2012 Sean Farley <sean@mcs.anl.gov>

parmetis: pass cflags to cmake

Hg-commit: 56fd62d0214667227b02254a07a3700b7fecc9ed


packages/parmetis.py

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