History log of /petsc/config/PETSc/ (Results 426 – 450 of 1914)
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fc78d35d04-Feb-2015 Satish Balay <balay@mcs.anl.gov>

ml: update to use tarball with build fix for osx (old versions)


/petsc/bin/maint/buildtest
/petsc/bin/maint/generatefortranstubs.py
/petsc/bin/pythonscripts/PetscBinaryIO.py
packages/ml.py
/petsc/include/finclude/ftn-custom/petscmat.h90
/petsc/include/petsc-private/pcimpl.h
/petsc/include/petscpc.h
/petsc/include/petscversion.h
/petsc/makefile
/petsc/setup.py
/petsc/src/dm/impls/da/dagtol.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/website/download/index.html
/petsc/src/ksp/ksp/impls/cg/cgeig.c
/petsc/src/ksp/ksp/impls/lsqr/lsqr.c
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/pc/impls/bjacobi/bjacobi.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/ts/adapt/interface/tsadapt.c
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/ts/interface/ts.c
/petsc/src/vec/is/is/utils/isdiff.c
/petsc/src/vec/vec/examples/tutorials/ex6.c
/petsc/src/vec/vec/interface/ftn-custom/zvectorf.c
/petsc/src/vec/vec/interface/rvector.c
7f9e0b0a26-Jan-2015 Barry Smith <bsmith@mcs.anl.gov>

Merge branch 'karpeev/fix-ksp-matgetschurcomplement-pmatreuse' into barry/experiment

Conflicts:
src/ksp/ksp/utils/schurm.c


/petsc/bin/maint/buildtest
/petsc/bin/maint/generatefortranstubs.py
/petsc/bin/maint/wwwindex.py
/petsc/bin/petsc-pythonscripts/petsc_gen_xdmf.py
/petsc/config/BuildSystem/config/packages/ctetgen.py
/petsc/config/BuildSystem/config/packages/f2cblaslapack.py
/petsc/config/BuildSystem/config/packages/openmp.py
/petsc/config/BuildSystem/config/packages/openmpclasses.py
/petsc/config/BuildSystem/config/packages/sowing.py
Configure.py
/petsc/config/builder.py
/petsc/config/gmakegen.py
/petsc/config/install.py
/petsc/gmakefile
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petsc-private/kspimpl.h
/petsc/include/petsc-private/linesearchimpl.h
/petsc/include/petsc-private/matimpl.h
/petsc/include/petsc-private/pcgamgimpl.h
/petsc/include/petsc-private/pcimpl.h
/petsc/include/petsc-private/pcmgimpl.h
/petsc/include/petsc-private/petscfeimpl.h
/petsc/include/petsc-private/petscfvimpl.h
/petsc/include/petsc-private/sfimpl.h
/petsc/include/petsc-private/snesimpl.h
/petsc/include/petsc-private/taoimpl.h
/petsc/include/petsc-private/taolinesearchimpl.h
/petsc/include/petsc-private/tsimpl.h
/petsc/include/petsc-private/vecimpl.h
/petsc/include/petsc-private/viewerimpl.h
/petsc/include/petsc.h
/petsc/include/petscdmplex.h
/petsc/include/petscds.h
/petsc/include/petscdt.h
/petsc/include/petscfe.h
/petsc/include/petscfv.h
/petsc/include/petscksp.h
/petsc/include/petscoptions.h
/petsc/include/petscpc.h
/petsc/include/petscsnes.h
/petsc/include/petscsys.h
/petsc/include/petscts.h
/petsc/include/petscvec.h
/petsc/include/petscviewer.h
/petsc/lib/petsc-conf/bfort-base.txt
/petsc/lib/petsc-conf/bfort-mpi.txt
/petsc/lib/petsc-conf/bfort-petsc.txt
/petsc/makefile
/petsc/setup.py
/petsc/src/contrib/fun3d/comp/flow.c
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/dt/interface/dtds.c
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/dt/interface/dtfv.c
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/da/dagtol.c
/petsc/src/dm/impls/da/hypre/mhyp.c
/petsc/src/dm/impls/da/hypre/mhyp.h
/petsc/src/dm/impls/moab/dmmoab.cxx
/petsc/src/dm/impls/network/networkcreate.c
/petsc/src/dm/impls/patch/patchcreate.c
/petsc/src/dm/impls/plex/examples/tests/ex1.c
/petsc/src/dm/impls/plex/ftn-custom/makefile
/petsc/src/dm/impls/plex/ftn-custom/zplexgmsh.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/plex/plexdistribute.c
/petsc/src/dm/impls/plex/plexexodusii.c
/petsc/src/dm/impls/plex/plexfem.c
/petsc/src/dm/impls/plex/plexgenerate.c
/petsc/src/dm/impls/plex/plexgeometry.c
/petsc/src/dm/impls/plex/plexgmsh.c
/petsc/src/dm/impls/plex/plexhdf5.c
/petsc/src/dm/impls/plex/plexlabel.c
/petsc/src/dm/impls/plex/plexpoint.c
/petsc/src/dm/impls/plex/plexrefine.c
/petsc/src/dm/impls/plex/plexsubmesh.c
/petsc/src/dm/impls/redundant/dmredundant.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/makefile
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/ksp/ksp/examples/tests/ex21.c
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tutorials/ex52.c
/petsc/src/ksp/ksp/examples/tutorials/ex61f.F90
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex54_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex54_classical.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex54f.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex55_0.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex55_NC.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex55_classical.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex55_sa.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex56_0.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex56_nns.out
/petsc/src/ksp/ksp/impls/bcgs/bcgs.c
/petsc/src/ksp/ksp/impls/bcgs/bcgsimpl.h
/petsc/src/ksp/ksp/impls/bcgsl/bcgsl.c
/petsc/src/ksp/ksp/impls/cg/cg.c
/petsc/src/ksp/ksp/impls/cg/cgne/cgne.c
/petsc/src/ksp/ksp/impls/cg/gltr/gltr.c
/petsc/src/ksp/ksp/impls/cg/nash/nash.c
/petsc/src/ksp/ksp/impls/cg/stcg/stcg.c
/petsc/src/ksp/ksp/impls/cheby/cheby.c
/petsc/src/ksp/ksp/impls/fcg/fcg.c
/petsc/src/ksp/ksp/impls/gcr/gcr.c
/petsc/src/ksp/ksp/impls/gmres/agmres/agmres.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/impls/gmres/fgmres/fgmres.c
/petsc/src/ksp/ksp/impls/gmres/gmres.c
/petsc/src/ksp/ksp/impls/gmres/gmresimpl.h
/petsc/src/ksp/ksp/impls/gmres/lgmres/lgmres.c
/petsc/src/ksp/ksp/impls/gmres/pgmres/pgmres.c
/petsc/src/ksp/ksp/impls/lcd/lcd.c
/petsc/src/ksp/ksp/impls/lsqr/lsqr.c
/petsc/src/ksp/ksp/impls/qcg/qcg.c
/petsc/src/ksp/ksp/impls/rich/rich.c
/petsc/src/ksp/ksp/impls/specest/specest.c
/petsc/src/ksp/ksp/utils/schurm.c
/petsc/src/ksp/pc/impls/ainvcusp/ainvcusp.cu
/petsc/src/ksp/pc/impls/asm/asm.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bicgstabcusp/bicgstabcusp.cu
/petsc/src/ksp/pc/impls/bjacobi/bjacobi.c
/petsc/src/ksp/pc/impls/composite/composite.c
/petsc/src/ksp/pc/impls/cp/cp.c
/petsc/src/ksp/pc/impls/eisens/eisen.c
/petsc/src/ksp/pc/impls/factor/cholesky/cholesky.c
/petsc/src/ksp/pc/impls/factor/factimpl.c
/petsc/src/ksp/pc/impls/factor/factor.h
/petsc/src/ksp/pc/impls/factor/icc/icc.c
/petsc/src/ksp/pc/impls/factor/ilu/ilu.c
/petsc/src/ksp/pc/impls/factor/lu/lu.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/classical.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/gamg.h
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/gasm/gasm.c
/petsc/src/ksp/pc/impls/hypre/hypre.c
/petsc/src/ksp/pc/impls/jacobi/jacobi.c
/petsc/src/ksp/pc/impls/kaczmarz/kaczmarz.c
/petsc/src/ksp/pc/impls/lsc/lsc.c
/petsc/src/ksp/pc/impls/mg/fmg.c
/petsc/src/ksp/pc/impls/mg/ftn-custom/zmgfuncf.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/mg/mgfunc.c
/petsc/src/ksp/pc/impls/mg/smg.c
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/ksp/pc/impls/parms/parms.c
/petsc/src/ksp/pc/impls/redistribute/redistribute.c
/petsc/src/ksp/pc/impls/redundant/redundant.c
/petsc/src/ksp/pc/impls/sacusp/sacusp.cu
/petsc/src/ksp/pc/impls/sacusp/sacusppoly.cu
/petsc/src/ksp/pc/impls/sor/sor.c
/petsc/src/ksp/pc/impls/spai/ispai.c
/petsc/src/ksp/pc/impls/svd/svd.c
/petsc/src/ksp/pc/impls/tfs/tfs.c
/petsc/src/ksp/pc/impls/wb/wb.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/color/impls/jp/jp.c
/petsc/src/mat/examples/tests/ex173.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex173_1.out
/petsc/src/mat/impls/aij/mpi/mkl_cpardiso/mkl_cpardiso.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpicusp/mpiaijcusp.cu
/petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c
/petsc/src/mat/impls/aij/seq/seqcusp/aijcusp.cu
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/aij/seq/seqviennacl/aijviennacl.cxx
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/mffd/mffddef.c
/petsc/src/mat/impls/mffd/mffdimpl.h
/petsc/src/mat/impls/mffd/wp.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/partition/impls/chaco/chaco.c
/petsc/src/mat/partition/impls/party/party.c
/petsc/src/mat/partition/impls/pmetis/pmetis.c
/petsc/src/mat/partition/impls/scotch/scotch.c
/petsc/src/snes/examples/tutorials/ex12.c
/petsc/src/snes/examples/tutorials/ex62.c
/petsc/src/snes/examples/tutorials/output/ex62_10.out
/petsc/src/snes/examples/tutorials/output/ex62_11.out
/petsc/src/snes/examples/tutorials/output/ex62_12.out
/petsc/src/snes/examples/tutorials/output/ex62_13.out
/petsc/src/snes/examples/tutorials/output/ex62_14.out
/petsc/src/snes/examples/tutorials/output/ex62_15.out
/petsc/src/snes/examples/tutorials/output/ex62_16.out
/petsc/src/snes/examples/tutorials/output/ex62_17.out
/petsc/src/snes/examples/tutorials/output/ex62_18.out
/petsc/src/snes/examples/tutorials/output/ex62_19.out
/petsc/src/snes/examples/tutorials/output/ex62_20.out
/petsc/src/snes/examples/tutorials/output/ex62_21.out
/petsc/src/snes/examples/tutorials/output/ex62_22.out
/petsc/src/snes/examples/tutorials/output/ex62_23.out
/petsc/src/snes/examples/tutorials/output/ex62_24.out
/petsc/src/snes/examples/tutorials/output/ex62_25.out
/petsc/src/snes/examples/tutorials/output/ex62_26.out
/petsc/src/snes/examples/tutorials/output/ex62_27.out
/petsc/src/snes/examples/tutorials/output/ex62_28.out
/petsc/src/snes/examples/tutorials/output/ex62_29.out
/petsc/src/snes/examples/tutorials/output/ex62_30.out
/petsc/src/snes/examples/tutorials/output/ex62_31.out
/petsc/src/snes/examples/tutorials/output/ex62_32.out
/petsc/src/snes/examples/tutorials/output/ex62_33.out
/petsc/src/snes/examples/tutorials/output/ex62_34.out
/petsc/src/snes/examples/tutorials/output/ex62_35.out
/petsc/src/snes/examples/tutorials/output/ex62_36.out
/petsc/src/snes/examples/tutorials/output/ex62_7.out
/petsc/src/snes/examples/tutorials/output/ex62_8.out
/petsc/src/snes/examples/tutorials/output/ex62_quad_q2p1_full.out
/petsc/src/snes/examples/tutorials/output/ex62_quad_q2q1_full.out
/petsc/src/snes/impls/composite/snescomposite.c
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/gs/snesgs.c
/petsc/src/snes/impls/ls/ls.c
/petsc/src/snes/impls/ms/ms.c
/petsc/src/snes/impls/multiblock/multiblock.c
/petsc/src/snes/impls/nasm/nasm.c
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/impls/ngmres/anderson.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/impls/richardson/snesrichardson.c
/petsc/src/snes/impls/shell/snesshell.c
/petsc/src/snes/impls/test/snestest.c
/petsc/src/snes/impls/tr/tr.c
/petsc/src/snes/impls/vi/ss/viss.c
/petsc/src/snes/impls/vi/vi.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesob.c
/petsc/src/snes/linesearch/impls/bt/linesearchbt.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/sys/classes/matlabengine/matlab.c
/petsc/src/sys/classes/random/interface/randomc.c
/petsc/src/sys/classes/random/randomimpl.h
/petsc/src/sys/classes/viewer/impls/draw/drawv.c
/petsc/src/sys/classes/viewer/impls/socket/send.c
/petsc/src/sys/objects/aoptions.c
/petsc/src/sys/objects/pname.c
/petsc/src/sys/threadcomm/interface/threadcommregi.c
/petsc/src/sys/webclient/box.c
/petsc/src/sys/webclient/globus.c
/petsc/src/sys/webclient/google.c
/petsc/src/sys/webclient/textbelt.c
/petsc/src/tao/bound/impls/blmvm/blmvm.c
/petsc/src/tao/bound/impls/bqpip/bqpip.c
/petsc/src/tao/bound/impls/gpcg/gpcg.c
/petsc/src/tao/bound/impls/tron/tron.c
/petsc/src/tao/complementarity/impls/ssls/ssls.c
/petsc/src/tao/complementarity/impls/ssls/ssls.h
/petsc/src/tao/constrained/impls/ipm/ipm.c
/petsc/src/tao/interface/fdtest.c
/petsc/src/tao/leastsquares/impls/pounders/pounders.c
/petsc/src/tao/linesearch/impls/armijo/armijo.c
/petsc/src/tao/linesearch/impls/gpcglinesearch/gpcglinesearch.c
/petsc/src/tao/linesearch/impls/morethuente/morethuente.c
/petsc/src/tao/linesearch/impls/owarmijo/owarmijo.c
/petsc/src/tao/linesearch/impls/unit/unit.c
/petsc/src/tao/pde_constrained/impls/lcl/lcl.c
/petsc/src/tao/unconstrained/impls/bmrm/bmrm.c
/petsc/src/tao/unconstrained/impls/cg/taocg.c
/petsc/src/tao/unconstrained/impls/lmvm/lmvm.c
/petsc/src/tao/unconstrained/impls/neldermead/neldermead.c
/petsc/src/tao/unconstrained/impls/nls/nls.c
/petsc/src/tao/unconstrained/impls/ntl/ntl.c
/petsc/src/tao/unconstrained/impls/ntr/ntr.c
/petsc/src/tao/unconstrained/impls/owlqn/owlqn.c
/petsc/src/ts/adapt/impls/basic/adaptbasic.c
/petsc/src/ts/adapt/impls/cfl/adaptcfl.c
/petsc/src/ts/adapt/interface/tsadapt.c
/petsc/src/ts/characteristic/interface/slregis.c
/petsc/src/ts/examples/tests/ex10.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/ex18.c
/petsc/src/ts/examples/tutorials/output/ex11_10.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_0.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_1.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_2.out
/petsc/src/ts/examples/tutorials/output/ex18_p1p1.out
/petsc/src/ts/examples/tutorials/output/ex18_p1p1_xper.out
/petsc/src/ts/examples/tutorials/output/ex18_p1p1_xper_ref.out
/petsc/src/ts/examples/tutorials/output/ex18_p1p1_xyper.out
/petsc/src/ts/examples/tutorials/output/ex18_p1p1_xyper_ref.out
/petsc/src/ts/examples/tutorials/output/ex18_p2p1.out
/petsc/src/ts/examples/tutorials/output/ex18_p2p1_xyper.out
/petsc/src/ts/examples/tutorials/output/ex18_p2p1_xyper_ref.out
/petsc/src/ts/impls/arkimex/arkimex.c
/petsc/src/ts/impls/eimex/eimex.c
/petsc/src/ts/impls/explicit/euler/euler.c
/petsc/src/ts/impls/explicit/rk/rk.c
/petsc/src/ts/impls/explicit/ssp/ssp.c
/petsc/src/ts/impls/implicit/alpha/alpha.c
/petsc/src/ts/impls/implicit/gl/gl.c
/petsc/src/ts/impls/implicit/gl/gladapt.c
/petsc/src/ts/impls/implicit/sundials/sundials.c
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/impls/pseudo/posindep.c
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/utils/dmplexts.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
/petsc/src/vec/is/sf/impls/window/sfwindow.c
/petsc/src/vec/is/sf/interface/sf.c
/petsc/src/vec/pf/impls/constant/const.c
/petsc/src/vec/pf/impls/matlab/cmatlab.c
/petsc/src/vec/pf/impls/string/cstring.c
/petsc/src/vec/pf/pfimpl.h
/petsc/src/vec/vec/impls/hypre/vhyp.c
/petsc/src/vec/vec/impls/seq/seqcusp/cuspvecimpl.h
/petsc/src/vec/vec/impls/seq/seqcusp/veccusp.cu
/petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx
/petsc/src/vec/vec/impls/seq/seqviennacl/viennaclvecimpl.h
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/vector.c
/petsc/tutorials/HandsOnExercise.html
f79c285d20-Jan-2015 Barry Smith <bsmith@mcs.anl.gov>

added example to test for thread safety

Contributed-by: Ed D'Azevedo <dazevedoef@ornl.gov>


options/libraryOptions.py
/petsc/src/ksp/ksp/examples/tutorials/ex61f.F90
/petsc/src/ksp/ksp/examples/tutorials/makefile
22b6d1ca16-Jan-2015 Barry Smith <bsmith@mcs.anl.gov>

added --with-threadsafety flag
other cleanup for threadsafety
removed Euclid due to bit rot


/petsc/config/BuildSystem/config/packages/SuiteSparse.py
/petsc/config/BuildSystem/config/setCompilers.py
options/libraryOptions.py
/petsc/config/configure.py
/petsc/config/examples/arch-linux-gcc-real-env.py
/petsc/config/examples/arch-osx-10.6-cxx-env.py
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petsc-private/kspimpl.h
/petsc/include/petsc-private/linesearchimpl.h
/petsc/include/petsc-private/matimpl.h
/petsc/include/petsc-private/pcimpl.h
/petsc/include/petsc-private/petscfeimpl.h
/petsc/include/petsc-private/sfimpl.h
/petsc/include/petsc-private/snesimpl.h
/petsc/include/petsc-private/taoimpl.h
/petsc/include/petsc-private/taolinesearchimpl.h
/petsc/include/petsc-private/tsimpl.h
/petsc/include/petsc-private/vecimpl.h
/petsc/include/petsc-private/viewerimpl.h
/petsc/include/petscoptions.h
/petsc/include/petscts.h
/petsc/include/petscvec.h
/petsc/include/petscviewer.h
/petsc/lib/petsc-conf/install.py
/petsc/setup.py
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/examples/tests/makefile
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/network/networkcreate.c
/petsc/src/dm/impls/patch/patchcreate.c
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/manual/acknowl.tex
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/linearsolvertable.html
/petsc/src/docs/website/index.html
/petsc/src/docs/website/miscellaneous/external.html
/petsc/src/ksp/ksp/examples/tests/ex32.c
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tests/output/ex32_cholmod.out
/petsc/src/ksp/ksp/examples/tests/output/ex32_cholmod_sbaij.out
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/impls/bcgs/bcgs.c
/petsc/src/ksp/ksp/impls/bcgs/bcgsimpl.h
/petsc/src/ksp/ksp/impls/bcgsl/bcgsl.c
/petsc/src/ksp/ksp/impls/cg/cg.c
/petsc/src/ksp/ksp/impls/cg/cgne/cgne.c
/petsc/src/ksp/ksp/impls/cg/gltr/gltr.c
/petsc/src/ksp/ksp/impls/cg/nash/nash.c
/petsc/src/ksp/ksp/impls/cg/stcg/stcg.c
/petsc/src/ksp/ksp/impls/cheby/cheby.c
/petsc/src/ksp/ksp/impls/fcg/fcg.c
/petsc/src/ksp/ksp/impls/gcr/gcr.c
/petsc/src/ksp/ksp/impls/gmres/agmres/agmres.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/impls/gmres/fgmres/fgmres.c
/petsc/src/ksp/ksp/impls/gmres/gmres.c
/petsc/src/ksp/ksp/impls/gmres/gmresimpl.h
/petsc/src/ksp/ksp/impls/gmres/lgmres/lgmres.c
/petsc/src/ksp/ksp/impls/gmres/pgmres/pgmres.c
/petsc/src/ksp/ksp/impls/lcd/lcd.c
/petsc/src/ksp/ksp/impls/lsqr/lsqr.c
/petsc/src/ksp/ksp/impls/lsqr/lsqr.h
/petsc/src/ksp/ksp/impls/qcg/qcg.c
/petsc/src/ksp/ksp/impls/rich/rich.c
/petsc/src/ksp/ksp/impls/specest/specest.c
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/ksp/utils/schurm.c
/petsc/src/ksp/pc/impls/ainvcusp/ainvcusp.cu
/petsc/src/ksp/pc/impls/asm/asm.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bicgstabcusp/bicgstabcusp.cu
/petsc/src/ksp/pc/impls/bjacobi/bjacobi.c
/petsc/src/ksp/pc/impls/composite/composite.c
/petsc/src/ksp/pc/impls/cp/cp.c
/petsc/src/ksp/pc/impls/eisens/eisen.c
/petsc/src/ksp/pc/impls/factor/cholesky/cholesky.c
/petsc/src/ksp/pc/impls/factor/factimpl.c
/petsc/src/ksp/pc/impls/factor/factor.h
/petsc/src/ksp/pc/impls/factor/icc/icc.c
/petsc/src/ksp/pc/impls/factor/ilu/ilu.c
/petsc/src/ksp/pc/impls/factor/lu/lu.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/classical.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/gamg.h
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/gasm/gasm.c
/petsc/src/ksp/pc/impls/hypre/hypre.c
/petsc/src/ksp/pc/impls/jacobi/jacobi.c
/petsc/src/ksp/pc/impls/kaczmarz/kaczmarz.c
/petsc/src/ksp/pc/impls/lsc/lsc.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/mg/mgimpl.h
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/ksp/pc/impls/parms/parms.c
/petsc/src/ksp/pc/impls/redistribute/redistribute.c
/petsc/src/ksp/pc/impls/redundant/redundant.c
/petsc/src/ksp/pc/impls/sacusp/sacusp.cu
/petsc/src/ksp/pc/impls/sacusp/sacusppoly.cu
/petsc/src/ksp/pc/impls/sor/sor.c
/petsc/src/ksp/pc/impls/spai/ispai.c
/petsc/src/ksp/pc/impls/svd/svd.c
/petsc/src/ksp/pc/impls/tfs/tfs.c
/petsc/src/ksp/pc/impls/wb/wb.c
/petsc/src/ksp/pc/interface/pcset.c
/petsc/src/mat/coarsen/coarsen.c
/petsc/src/mat/color/impls/jp/jp.c
/petsc/src/mat/color/interface/matcoloring.c
/petsc/src/mat/impls/aij/mpi/mpicusp/mpiaijcusp.cu
/petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu
/petsc/src/mat/impls/aij/seq/klu/klu.c
/petsc/src/mat/impls/aij/seq/seqcusp/aijcusp.cu
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/aij/seq/seqviennacl/aijviennacl.cxx
/petsc/src/mat/impls/aij/seq/umfpack/umfpack.c
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/mffd/mffddef.c
/petsc/src/mat/impls/mffd/mffdimpl.h
/petsc/src/mat/impls/mffd/wp.c
/petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c
/petsc/src/mat/partition/impls/chaco/chaco.c
/petsc/src/mat/partition/impls/party/party.c
/petsc/src/mat/partition/impls/pmetis/pmetis.c
/petsc/src/mat/partition/impls/scotch/scotch.c
/petsc/src/mat/partition/partition.c
/petsc/src/mat/utils/gcreate.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex19_umfpack.out
/petsc/src/snes/impls/composite/snescomposite.c
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/gs/snesgs.c
/petsc/src/snes/impls/ls/ls.c
/petsc/src/snes/impls/ms/ms.c
/petsc/src/snes/impls/multiblock/multiblock.c
/petsc/src/snes/impls/nasm/nasm.c
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/impls/ngmres/anderson.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/impls/richardson/snesrichardson.c
/petsc/src/snes/impls/shell/snesshell.c
/petsc/src/snes/impls/test/snestest.c
/petsc/src/snes/impls/tr/tr.c
/petsc/src/snes/impls/vi/ss/viss.c
/petsc/src/snes/impls/vi/vi.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesj.c
/petsc/src/snes/interface/snesob.c
/petsc/src/snes/linesearch/impls/bt/linesearchbt.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/sys/classes/random/interface/randomc.c
/petsc/src/sys/classes/random/randomimpl.h
/petsc/src/sys/classes/viewer/impls/draw/drawv.c
/petsc/src/sys/classes/viewer/impls/socket/send.c
/petsc/src/sys/classes/viewer/interface/viewreg.c
/petsc/src/sys/dll/reg.c
/petsc/src/sys/objects/aoptions.c
/petsc/src/sys/objects/options.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/objects/subcomm.c
/petsc/src/sys/threadcomm/interface/threadcomm.c
/petsc/src/sys/utils/sseenabled.c
/petsc/src/tao/bound/impls/blmvm/blmvm.c
/petsc/src/tao/bound/impls/bqpip/bqpip.c
/petsc/src/tao/bound/impls/gpcg/gpcg.c
/petsc/src/tao/bound/impls/tron/tron.c
/petsc/src/tao/bound/utils/isutil.c
/petsc/src/tao/complementarity/impls/ssls/ssfls.c
/petsc/src/tao/complementarity/impls/ssls/ssls.c
/petsc/src/tao/complementarity/impls/ssls/ssls.h
/petsc/src/tao/constrained/impls/ipm/ipm.c
/petsc/src/tao/interface/fdtest.c
/petsc/src/tao/interface/taosolver.c
/petsc/src/tao/leastsquares/impls/pounders/pounders.c
/petsc/src/tao/linesearch/impls/armijo/armijo.c
/petsc/src/tao/linesearch/impls/morethuente/morethuente.c
/petsc/src/tao/linesearch/impls/owarmijo/owarmijo.c
/petsc/src/tao/linesearch/impls/unit/unit.c
/petsc/src/tao/linesearch/interface/taolinesearch.c
/petsc/src/tao/matrix/lmvmmat.c
/petsc/src/tao/pde_constrained/examples/tutorials/elliptic.c
/petsc/src/tao/pde_constrained/examples/tutorials/hyperbolic.c
/petsc/src/tao/pde_constrained/examples/tutorials/parabolic.c
/petsc/src/tao/pde_constrained/impls/lcl/lcl.c
/petsc/src/tao/unconstrained/impls/bmrm/bmrm.c
/petsc/src/tao/unconstrained/impls/cg/taocg.c
/petsc/src/tao/unconstrained/impls/lmvm/lmvm.c
/petsc/src/tao/unconstrained/impls/neldermead/neldermead.c
/petsc/src/tao/unconstrained/impls/nls/nls.c
/petsc/src/tao/unconstrained/impls/ntl/ntl.c
/petsc/src/tao/unconstrained/impls/ntr/ntr.c
/petsc/src/tao/unconstrained/impls/owlqn/owlqn.c
/petsc/src/ts/adapt/impls/basic/adaptbasic.c
/petsc/src/ts/adapt/impls/cfl/adaptcfl.c
/petsc/src/ts/adapt/interface/tsadapt.c
/petsc/src/ts/examples/tests/ex10.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex1.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/ex20.c
/petsc/src/ts/examples/tutorials/ex31.c
/petsc/src/ts/examples/tutorials/phasefield/biharmonic.c
/petsc/src/ts/examples/tutorials/phasefield/biharmonic2.c
/petsc/src/ts/examples/tutorials/phasefield/biharmonic3.c
/petsc/src/ts/impls/arkimex/arkimex.c
/petsc/src/ts/impls/eimex/eimex.c
/petsc/src/ts/impls/explicit/euler/euler.c
/petsc/src/ts/impls/explicit/rk/rk.c
/petsc/src/ts/impls/explicit/ssp/ssp.c
/petsc/src/ts/impls/implicit/alpha/alpha.c
/petsc/src/ts/impls/implicit/gl/gl.c
/petsc/src/ts/impls/implicit/gl/gladapt.c
/petsc/src/ts/impls/implicit/sundials/sundials.c
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/impls/pseudo/posindep.c
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/ts/interface/ts.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
/petsc/src/vec/is/sf/impls/window/sfwindow.c
/petsc/src/vec/is/sf/interface/sf.c
/petsc/src/vec/pf/impls/constant/const.c
/petsc/src/vec/pf/impls/matlab/cmatlab.c
/petsc/src/vec/pf/impls/string/cstring.c
/petsc/src/vec/pf/interface/pf.c
/petsc/src/vec/pf/pfimpl.h
/petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx
/petsc/src/vec/vec/impls/seq/seqviennacl/viennaclvecimpl.h
/petsc/src/vec/vec/interface/vector.c
8f5bdbf213-Jan-2015 Barry Smith <bsmith@mcs.anl.gov>

updates for module file to work with --prefix

Suggested-by: Lisandro Dalcin <dalcinl@gmail.com>


/petsc/config/BuildSystem/config/packages/SuiteSparse.py
/petsc/config/BuildSystem/config/setCompilers.py
Configure.py
/petsc/config/configure.py
/petsc/config/examples/arch-linux-gcc-real-env.py
/petsc/config/examples/arch-osx-10.6-cxx-env.py
/petsc/lib/petsc-conf/install.py
/petsc/setup.py
/petsc/src/docs/tex/manual/acknowl.tex
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/linearsolvertable.html
/petsc/src/docs/website/index.html
/petsc/src/docs/website/miscellaneous/external.html
/petsc/src/ksp/ksp/examples/tests/ex32.c
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tests/output/ex32_cholmod.out
/petsc/src/ksp/ksp/examples/tests/output/ex32_cholmod_sbaij.out
/petsc/src/ksp/ksp/impls/lsqr/lsqr.c
/petsc/src/mat/impls/aij/seq/klu/klu.c
/petsc/src/mat/impls/aij/seq/umfpack/umfpack.c
/petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex19_umfpack.out
fe998a8013-Jan-2015 Barry Smith <bsmith@mcs.anl.gov>

manual merge of conflict


/petsc/bin/configVars.py
/petsc/bin/maint/builddist
/petsc/bin/maint/buildtest
/petsc/bin/maint/generateetags.py
/petsc/bin/maint/generatefortranstubs.py
/petsc/bin/maint/generators/matlab.py
/petsc/bin/maint/toclapack.sh
/petsc/bin/maint/xclude
/petsc/bin/mpiexec.sshsync
/petsc/bin/petsc-mpiexec.uni
/petsc/bin/petsc-pythonscripts/PetscBinaryIO.py
/petsc/bin/petsc-pythonscripts/PetscBinaryIO_tests.py
/petsc/bin/petsc-pythonscripts/petsc_conf.py
/petsc/bin/petsc-pythonscripts/petsc_gen_xdmf.py
/petsc/bin/petsc-pythonscripts/petsclogformat.py
/petsc/bin/petsc-pythonscripts/petscnagupgrade.py
/petsc/bin/petscmpiexec
/petsc/bin/portabilitycheck.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/MPI.py
/petsc/config/BuildSystem/config/packages/Triangle.py
/petsc/config/BuildSystem/config/packages/fblaslapack.py
/petsc/config/BuildSystem/config/packages/mpi4py.py
/petsc/config/BuildSystem/config/packages/petsc4py.py
/petsc/config/BuildSystem/config/regression/frameworkTest.py
Configure.py
options/installDir.py
petsc.py
/petsc/config/builder.py
/petsc/config/cmakeboot.py
/petsc/config/cmakegen.py
/petsc/config/configure.py
/petsc/gmakefile
/petsc/include/makefile
/petsc/include/petsc-finclude/ftn-custom/makefile
/petsc/include/petsc-finclude/ftn-custom/petscdm.h90
/petsc/include/petsc-finclude/ftn-custom/petscdmcomposite.h90
/petsc/include/petsc-finclude/ftn-custom/petscdmda.h90
/petsc/include/petsc-finclude/ftn-custom/petscdmdef.h90
/petsc/include/petsc-finclude/ftn-custom/petscdmhide.h90
/petsc/include/petsc-finclude/ftn-custom/petscdmplex.h90
/petsc/include/petsc-finclude/ftn-custom/petscdmplexdef.h90
/petsc/include/petsc-finclude/ftn-custom/petscdmredundant.h90
/petsc/include/petsc-finclude/ftn-custom/petscdmshell.h90
/petsc/include/petsc-finclude/ftn-custom/petscdt.h90
/petsc/include/petsc-finclude/ftn-custom/petscdtdef.h90
/petsc/include/petsc-finclude/ftn-custom/petscdthide.h90
/petsc/include/petsc-finclude/ftn-custom/petscis.h90
/petsc/include/petsc-finclude/ftn-custom/petscisdef.h90
/petsc/include/petsc-finclude/ftn-custom/petscishide.h90
/petsc/include/petsc-finclude/ftn-custom/petscksp.h90
/petsc/include/petsc-finclude/ftn-custom/petsckspdef.h90
/petsc/include/petsc-finclude/ftn-custom/petscksphide.h90
/petsc/include/petsc-finclude/ftn-custom/petscmat.h90
/petsc/include/petsc-finclude/ftn-custom/petscmatdef.h90
/petsc/include/petsc-finclude/ftn-custom/petscmathide.h90
/petsc/include/petsc-finclude/ftn-custom/petscpc.h90
/petsc/include/petsc-finclude/ftn-custom/petscpcdef.h90
/petsc/include/petsc-finclude/ftn-custom/petscpchide.h90
/petsc/include/petsc-finclude/ftn-custom/petscsnes.h90
/petsc/include/petsc-finclude/ftn-custom/petscsnesdef.h90
/petsc/include/petsc-finclude/ftn-custom/petscsneshide.h90
/petsc/include/petsc-finclude/ftn-custom/petscts.h90
/petsc/include/petsc-finclude/ftn-custom/petsctsdef.h90
/petsc/include/petsc-finclude/ftn-custom/petsctshide.h90
/petsc/include/petsc-finclude/ftn-custom/petscvec.h90
/petsc/include/petsc-finclude/ftn-custom/petscvecdef.h90
/petsc/include/petsc-finclude/ftn-custom/petscvechide.h90
/petsc/include/petsc-finclude/ftn-custom/petscviewer.h90
/petsc/include/petsc-finclude/ftn-custom/petscviewerdef.h90
/petsc/include/petsc-finclude/ftn-custom/petscviewerhide.h90
/petsc/include/petsc-finclude/makefile
/petsc/include/petsc-finclude/petsc.h
/petsc/include/petsc-finclude/petsc.h90
/petsc/include/petsc-finclude/petscao.h
/petsc/include/petsc-finclude/petscaodef.h
/petsc/include/petsc-finclude/petscbag.h
/petsc/include/petsc-finclude/petscbagdef.h
/petsc/include/petsc-finclude/petscdef.h
/petsc/include/petsc-finclude/petscdm.h
/petsc/include/petsc-finclude/petscdm.h90
/petsc/include/petsc-finclude/petscdmcomposite.h90
/petsc/include/petsc-finclude/petscdmda.h
/petsc/include/petsc-finclude/petscdmda.h90
/petsc/include/petsc-finclude/petscdmdadef.h
/petsc/include/petsc-finclude/petscdmdef.h
/petsc/include/petsc-finclude/petscdmplex.h
/petsc/include/petsc-finclude/petscdmplex.h90
/petsc/include/petsc-finclude/petscdmplexdef.h
/petsc/include/petsc-finclude/petscdmredundant.h90
/petsc/include/petsc-finclude/petscdmshell.h90
/petsc/include/petsc-finclude/petscdraw.h
/petsc/include/petsc-finclude/petscdrawdef.h
/petsc/include/petsc-finclude/petscdt.h90
/petsc/include/petsc-finclude/petscerror.h
/petsc/include/petsc-finclude/petscerrordef.h
/petsc/include/petsc-finclude/petscis.h
/petsc/include/petsc-finclude/petscis.h90
/petsc/include/petsc-finclude/petscisdef.h
/petsc/include/petsc-finclude/petscksp.h
/petsc/include/petsc-finclude/petscksp.h90
/petsc/include/petsc-finclude/petsckspdef.h
/petsc/include/petsc-finclude/petsclog.h
/petsc/include/petsc-finclude/petsclogdef.h
/petsc/include/petsc-finclude/petscmat.h
/petsc/include/petsc-finclude/petscmat.h90
/petsc/include/petsc-finclude/petscmatdef.h
/petsc/include/petsc-finclude/petscmatfactorinfosize.h
/petsc/include/petsc-finclude/petscmatinfosize.h
/petsc/include/petsc-finclude/petscpc.h
/petsc/include/petsc-finclude/petscpc.h90
/petsc/include/petsc-finclude/petscpcdef.h
/petsc/include/petsc-finclude/petscsnes.h
/petsc/include/petsc-finclude/petscsnes.h90
/petsc/include/petsc-finclude/petscsnesdef.h
/petsc/include/petsc-finclude/petscsnesfas.h
/petsc/include/petsc-finclude/petscsnesfasdef.h
/petsc/include/petsc-finclude/petscsys.h
/petsc/include/petsc-finclude/petscsysdef.h
/petsc/include/petsc-finclude/petsctao.h
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/petsc/src/vec/vec/utils/f90-custom/makefile
/petsc/src/vec/vec/utils/ftn-custom/makefile
/petsc/src/vec/vec/utils/makefile
/petsc/src/vec/vec/utils/matlab/makefile
/petsc/src/vec/vec/utils/veccusp/makefile
/petsc/tutorials/makefile
/petsc/tutorials/python/ex1f.F
/petsc/tutorials/python/makefile
60d296a906-Jan-2015 Matthew G. Knepley <knepley@gmail.com>

Merge branch 'knepley/fix-configure-package-check'

* knepley/fix-configure-package-check:
Configure: Fix behavior of scalar types check with OpenCL


/petsc/bin/maint/PetscStaticFunctionCandidates.py
/petsc/bin/petscpythonscripts/PetscBinaryIO.py
/petsc/bin/petscpythonscripts/PetscBinaryIO_tests.py
/petsc/bin/petscpythonscripts/petsc_conf.py
/petsc/bin/petscpythonscripts/petsc_gen_xdmf.py
/petsc/bin/petscpythonscripts/petsclogformat.py
/petsc/bin/petscpythonscripts/petscnagupgrade.py
/petsc/conf/install.py
/petsc/conf/rules
/petsc/config/BuildSystem/config/packages/MPICH.py
/petsc/config/BuildSystem/config/setCompilers.py
Configure.py
/petsc/config/configure.py
/petsc/src/dm/impls/plex/plex.c
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
5faf1eac06-Jan-2015 Matthew G. Knepley <knepley@gmail.com>

Configure: Fix behavior of scalar types check with OpenCL


Configure.py
fb7da6fd31-Dec-2014 Barry Smith <bsmith@mcs.anl.gov>

move generated "module" file to conf directory since it has no standard location


/petsc/bin/maint/generatefortranstubs.py
/petsc/bin/pythonscripts/petsc_conf.py
/petsc/conf/install.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/BlasLapack.py
/petsc/config/BuildSystem/config/packages/SuiteSparse.py
/petsc/config/BuildSystem/config/packages/hwloc.py
/petsc/config/BuildSystem/config/packages/mkl_cpardiso.py
Configure.py
/petsc/config/builder.py
/petsc/config/configure.py
/petsc/config/examples/arch-ms-msvc2012-intelmpi-cudano-nomumps-cpardiso-indexes64-mklilp64-debug.py
/petsc/include/finclude/ftn-custom/petscmat.h90
/petsc/include/mpiuni/mpi.h
/petsc/include/petsc-private/dmdaimpl.h
/petsc/include/petsc-private/dmpleximpl.h
/petsc/include/petsc-private/isimpl.h
/petsc/include/petsc-private/kspimpl.h
/petsc/include/petsc-private/petscfeimpl.h
/petsc/include/petsc-private/snesimpl.h
/petsc/include/petscdmda.h
/petsc/include/petscdmmoab.h
/petsc/include/petscdmplex.h
/petsc/include/petscerror.h
/petsc/include/petscfv.h
/petsc/include/petscfvtypes.h
/petsc/include/petscis.h
/petsc/include/petscistypes.h
/petsc/include/petscksp.h
/petsc/include/petscmat.h
/petsc/include/petscsnes.h
/petsc/include/petscsys.h
/petsc/include/petscviewerhdf5.h
/petsc/share/petsc/matlab/PetscBinaryWrite.m
/petsc/src/benchmarks/streams/MPIVersion.c
/petsc/src/contrib/fun3d/comp/flow.c
/petsc/src/contrib/fun3d/comp/ginput.faces
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/da/da1.c
/petsc/src/dm/impls/da/da2.c
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/da/dadestroy.c
/petsc/src/dm/impls/da/daindex.c
/petsc/src/dm/impls/da/fdda.c
/petsc/src/dm/impls/da/gr2.c
/petsc/src/dm/impls/moab/dmmbfield.cxx
/petsc/src/dm/impls/moab/dmmbmat.cxx
/petsc/src/dm/impls/moab/dmmbvec.cxx
/petsc/src/dm/impls/moab/dmmoab.cxx
/petsc/src/dm/impls/plex/examples/tests/ex1.c
/petsc/src/dm/impls/plex/examples/tests/ex12.c
/petsc/src/dm/impls/plex/examples/tests/output/ex12_1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex12_2.out
/petsc/src/dm/impls/plex/examples/tests/output/ex12_3.out
/petsc/src/dm/impls/plex/examples/tests/output/ex12_4.out
/petsc/src/dm/impls/plex/examples/tests/output/ex12_5.out
/petsc/src/dm/impls/plex/examples/tests/output/ex12_6.out
/petsc/src/dm/impls/plex/examples/tests/output/ex12_7.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_13.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_14.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_17.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_18.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_2.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_5.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_9.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_8.out
/petsc/src/dm/impls/plex/examples/tests/output/ex5_9.out
/petsc/src/dm/impls/plex/ftn-custom/makefile
/petsc/src/dm/impls/plex/ftn-custom/zplexcreate.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexdistribute.c
/petsc/src/dm/impls/plex/plexgenerate.c
/petsc/src/dm/impls/plex/plexhdf5.c
/petsc/src/dm/impls/plex/plexlabel.c
/petsc/src/dm/impls/plex/plexpartition.c
/petsc/src/dm/impls/plex/plexrefine.c
/petsc/src/dm/impls/redundant/dmredundant.c
/petsc/src/dm/impls/shell/dmshell.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/index.html
/petsc/src/ksp/ksp/examples/tests/ex45.c
/petsc/src/ksp/ksp/examples/tests/ex8.c
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tests/output/ex11_1.out
/petsc/src/ksp/ksp/examples/tests/output/ex11_2.out
/petsc/src/ksp/ksp/examples/tests/output/ex45_1.out
/petsc/src/ksp/ksp/examples/tutorials/ex35.cxx
/petsc/src/ksp/ksp/examples/tutorials/ex43.c
/petsc/src/ksp/ksp/examples/tutorials/ex49.c
/petsc/src/ksp/ksp/examples/tutorials/ex54.c
/petsc/src/ksp/ksp/examples/tutorials/ex59.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex43_3.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex43_bjacobi.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex43_nested_gmg.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex49_4.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex49_5.out
/petsc/src/ksp/ksp/impls/fcg/fcg.c
/petsc/src/ksp/ksp/impls/gmres/gmres.c
/petsc/src/ksp/ksp/impls/rich/rich.c
/petsc/src/ksp/ksp/impls/specest/specest.c
/petsc/src/ksp/ksp/interface/ftn-custom/zitfuncf.c
/petsc/src/ksp/ksp/interface/ftn-custom/zxonf.c
/petsc/src/ksp/ksp/interface/iguess.c
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/ksp/interface/iterativ.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/interface/xmon.c
/petsc/src/ksp/pc/impls/factor/ilu/ilu.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/tools.c
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/ksp/pc/impls/tfs/gs.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/color/impls/greedy/greedy.c
/petsc/src/mat/color/impls/jp/jp.c
/petsc/src/mat/color/impls/minpack/color.c
/petsc/src/mat/color/impls/natural/natural.c
/petsc/src/mat/examples/tests/ex172.c
/petsc/src/mat/examples/tests/ex99.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex171_1.out
/petsc/src/mat/examples/tests/output/ex180_1.out
/petsc/src/mat/impls/aij/mpi/fdmpiaij.c
/petsc/src/mat/impls/aij/mpi/makefile
/petsc/src/mat/impls/aij/mpi/mkl_cpardiso/makefile
/petsc/src/mat/impls/aij/mpi/mkl_cpardiso/mkl_cpardiso.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aijfact.c
/petsc/src/mat/impls/aij/seq/fdaij.c
/petsc/src/mat/impls/aij/seq/inode.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/baij/seq/baijfact2.c
/petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/matfd/fdmatrix.c
/petsc/src/snes/examples/tutorials/ex19.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/impls/vi/rs/virs.c
/petsc/src/snes/interface/ftn-custom/zsnesf.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesut.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/snes/utils/f90-custom/makefile
/petsc/src/snes/utils/f90-custom/zdmplexsnesf90.c
/petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c
/petsc/src/sys/classes/viewer/impls/socket/send.c
/petsc/src/sys/classes/viewer/impls/vtk/vtkv.c
/petsc/src/sys/classes/viewer/interface/viewreg.c
/petsc/src/sys/error/err.c
/petsc/src/sys/error/errtrace.c
/petsc/src/sys/objects/options.c
/petsc/src/tao/bound/impls/tron/tron.c
/petsc/src/tao/interface/taosolver.c
/petsc/src/tao/interface/taosolver_fg.c
/petsc/src/tao/leastsquares/impls/pounders/pounders.c
/petsc/src/tao/pde_constrained/impls/lcl/lcl.c
/petsc/src/ts/adapt/interface/tsadapt.c
/petsc/src/ts/examples/tutorials/ex35.cxx
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9bus.c
/petsc/src/ts/impls/eimex/eimex.c
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/ts/interface/ts.c
/petsc/src/vec/is/is/impls/general/general.c
/petsc/src/vec/is/is/utils/ftn-custom/ziscoloringf.c
/petsc/src/vec/is/is/utils/iscoloring.c
/petsc/src/vec/is/sf/impls/window/sfwindow.c
/petsc/src/vec/is/utils/isio.c
/petsc/src/vec/is/utils/vsectionis.c
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/vecio.c
44d713ff19-Dec-2014 Matthew G. Knepley <knepley@gmail.com>

Configure: Fixed misspelling


Regression.py
/petsc/config/builder.py
c7c6174319-Dec-2014 Satish Balay <balay@mcs.anl.gov>

pastix: update to latest release. Fixes https://bitbucket.org/petsc/petsc/issue/84/


packages/PaStiX.py
30b8aa0719-Dec-2014 Matthew G. Knepley <knepley@gmail.com>

Configure: libraryOptions has all sorts of crap in it, so pull out indexTypes.py
- Needs to depend on setCompilers since it checks for a symbol
- Change refs in all modules to indexTypes


/petsc/config/BuildSystem/config/packages/PTScotch.py
/petsc/config/BuildSystem/config/packages/PaStiX.py
/petsc/config/BuildSystem/config/packages/SuperLU_DIST.py
/petsc/config/BuildSystem/config/packages/SuperLU_MT.py
/petsc/config/BuildSystem/config/packages/Zoltan.py
/petsc/config/BuildSystem/config/packages/hypre.py
/petsc/config/BuildSystem/config/packages/metis.py
/petsc/config/BuildSystem/config/packages/parmetis.py
Configure.py
Regression.py
options/indexTypes.py
options/libraryOptions.py
/petsc/config/builder.py
/petsc/config/cmakeboot.py
282764d418-Dec-2014 Matthew G. Knepley <knepley@gmail.com>

Configure: Require libraryOptions for PETSc module


Configure.py
bc35ecf917-Dec-2014 Barry Smith <bsmith@mcs.anl.gov>

Wrong parameters were set for maximum integer values for SuiteSparse for long long indices

Reported-by: Garth Wells <gnw20@cam.ac.uk>


/petsc/config/BuildSystem/config/packages/MPI.py
packages/SuiteSparse.py
/petsc/src/ksp/ksp/impls/cg/groppcg/groppcg.c
/petsc/src/ksp/ksp/impls/cg/pipecg/pipecg.c
/petsc/src/ksp/ksp/impls/cr/pipecr/pipecr.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/mat/examples/tests/ex99.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/ts/adapt/interface/tsadapt.c
/petsc/src/vec/vec/interface/rvector.c
dbb46ebf15-Dec-2014 Matthew G. Knepley <knepley@gmail.com>

Configure: Added new providers to do checks for index size and scalar type


/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/BlasLapack.py
/petsc/config/BuildSystem/config/packages/MPI.py
/petsc/config/BuildSystem/config/packages/MPICH.py
/petsc/config/BuildSystem/config/packages/OpenMPI.py
/petsc/config/BuildSystem/config/packages/c2html.py
/petsc/config/BuildSystem/config/packages/cmake.py
/petsc/config/BuildSystem/config/packages/f2cblaslapack.py
/petsc/config/BuildSystem/config/packages/fblaslapack.py
/petsc/config/BuildSystem/config/packages/make.py
/petsc/config/BuildSystem/config/packages/petsc4py.py
Configure.py
/petsc/config/builder.py
/petsc/include/petsc-private/dmpleximpl.h
/petsc/include/petsc-private/viewerimpl.h
/petsc/include/petscbt.h
/petsc/include/petscdmplex.h
/petsc/include/petsclog.h
/petsc/include/petscsnes.h
/petsc/include/petscsys.h
/petsc/include/petscvalgrind.h
/petsc/include/petscviewer.h
/petsc/share/petsc/datafiles/meshes/square.msh
/petsc/share/petsc/datafiles/meshes/square_bin.msh
/petsc/src/dm/impls/plex/examples/tests/ex1.c
/petsc/src/dm/impls/plex/examples/tests/ex13.c
/petsc/src/dm/impls/plex/examples/tests/ex9.c
/petsc/src/dm/impls/plex/examples/tests/makefile
/petsc/src/dm/impls/plex/examples/tests/output/ex13_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex13_1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex13_2.out
/petsc/src/dm/impls/plex/examples/tests/output/ex13_3.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_15.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_16.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_17.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_18.out
/petsc/src/dm/impls/plex/makefile
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/plex/plexgenerate.c
/petsc/src/dm/impls/plex/plexgmsh.c
/petsc/src/dm/impls/plex/plexorient.c
/petsc/src/docs/tex/manual/developers.tex
/petsc/src/docs/tex/petsc.bib
/petsc/src/ksp/pc/impls/bddc/bddcgraph.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/mat/examples/tests/ex99.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/snes/examples/tutorials/ex19.c
/petsc/src/snes/impls/composite/snescomposite.c
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/gs/gssecant.c
/petsc/src/snes/interface/snes.c
/petsc/src/sys/classes/viewer/impls/ascii/filev.c
/petsc/src/sys/classes/viewer/impls/binary/binv.c
/petsc/src/sys/classes/viewer/interface/view.c
/petsc/src/sys/dll/dlimpl.c
/petsc/src/sys/error/checkptr.c
/petsc/src/sys/logging/utils/eventlog.c
/petsc/src/sys/objects/inherit.c
/petsc/src/sys/objects/init.c
/petsc/src/sys/objects/pinit.c
/petsc/src/ts/adapt/interface/tsadapt.c
72e5196730-Nov-2014 Barry Smith <bsmith@mcs.anl.gov>

Merge branch 'barry/remove-unneeded-paren-petscmalloc'

Conflicts:
src/mat/impls/baij/seq/baij.c


/petsc/conf/rules
/petsc/config/BuildSystem/config/framework.py
/petsc/config/BuildSystem/config/packages/viennacl.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/BuildSystem/config/utilities/missing.py
Regression.py
/petsc/gmakefile
/petsc/include/petscbt.h
/petsc/include/petscsys.h
/petsc/makefile
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/examples/tests/ex8.c
/petsc/src/dm/examples/tests/makefile
/petsc/src/dm/examples/tutorials/ex1.c
/petsc/src/dm/examples/tutorials/ex6.c
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/da/da.c
/petsc/src/dm/impls/da/da1.c
/petsc/src/dm/impls/da/dadd.c
/petsc/src/dm/impls/da/dagetelem.c
/petsc/src/dm/impls/da/dainterp.c
/petsc/src/dm/impls/da/daltol.c
/petsc/src/dm/impls/da/dapreallocate.c
/petsc/src/dm/impls/da/fdda.c
/petsc/src/dm/impls/da/usfft/matusfft.c
/petsc/src/dm/impls/network/network.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexdistribute.c
/petsc/src/dm/impls/plex/plexgenerate.c
/petsc/src/dm/impls/plex/plexgmsh.c
/petsc/src/dm/impls/plex/plexlabel.c
/petsc/src/dm/impls/plex/plexpartition.c
/petsc/src/dm/impls/plex/plexrefine.c
/petsc/src/dm/impls/plex/plexreorder.c
/petsc/src/dm/impls/plex/plexsubmesh.c
/petsc/src/dm/impls/plex/plextree.c
/petsc/src/dm/impls/plex/plexvtk.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmget.c
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/ksp/examples/tests/ex10.c
/petsc/src/ksp/ksp/examples/tests/ex11.c
/petsc/src/ksp/ksp/examples/tests/ex30.c
/petsc/src/ksp/ksp/examples/tests/ex32.c
/petsc/src/ksp/ksp/examples/tests/ex4.c
/petsc/src/ksp/ksp/examples/tutorials/ex10.c
/petsc/src/ksp/ksp/examples/tutorials/ex42.c
/petsc/src/ksp/ksp/examples/tutorials/ex43.c
/petsc/src/ksp/ksp/examples/tutorials/ex49.c
/petsc/src/ksp/ksp/examples/tutorials/ex51.c
/petsc/src/ksp/ksp/examples/tutorials/ex52.c
/petsc/src/ksp/ksp/examples/tutorials/ex56.c
/petsc/src/ksp/ksp/examples/tutorials/ex59.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/impls/cg/groppcg/groppcg.c
/petsc/src/ksp/ksp/impls/cg/pipecg/pipecg.c
/petsc/src/ksp/ksp/impls/cr/pipecr/pipecr.c
/petsc/src/ksp/ksp/impls/gcr/gcr.c
/petsc/src/ksp/ksp/impls/gmres/borthog2.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/impls/gmres/fgmres/fgmres.c
/petsc/src/ksp/ksp/impls/gmres/gmres.c
/petsc/src/ksp/ksp/impls/gmres/lgmres/lgmres.c
/petsc/src/ksp/ksp/impls/gmres/pgmres/pgmres.c
/petsc/src/ksp/ksp/interface/iguess.c
/petsc/src/ksp/pc/impls/asm/asm.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddc.h
/petsc/src/ksp/pc/impls/bddc/bddcfetidp.c
/petsc/src/ksp/pc/impls/bddc/bddcgraph.c
/petsc/src/ksp/pc/impls/bddc/bddcnullspace.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcscalingbasic.c
/petsc/src/ksp/pc/impls/bjacobi/bjacobi.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/gasm/gasm.c
/petsc/src/ksp/pc/impls/is/nn/nn.c
/petsc/src/ksp/pc/impls/is/pcis.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/ksp/pc/impls/parms/parms.c
/petsc/src/ksp/pc/impls/redistribute/redistribute.c
/petsc/src/ksp/pc/impls/tfs/tfs.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/coarsen/impls/hem/hem.c
/petsc/src/mat/color/impls/minpack/color.c
/petsc/src/mat/color/impls/natural/natural.c
/petsc/src/mat/color/utils/bipartite.c
/petsc/src/mat/color/utils/valid.c
/petsc/src/mat/examples/tests/ex116.c
/petsc/src/mat/examples/tests/ex118.c
/petsc/src/mat/examples/tests/ex120.c
/petsc/src/mat/examples/tests/ex129.c
/petsc/src/mat/examples/tests/ex144.c
/petsc/src/mat/examples/tests/ex146.c
/petsc/src/mat/examples/tests/ex152.c
/petsc/src/mat/examples/tests/ex32.c
/petsc/src/mat/examples/tests/ex99.c
/petsc/src/mat/examples/tutorials/ex12.c
/petsc/src/mat/examples/tutorials/ex5.c
/petsc/src/mat/impls/adj/mpi/mpiadj.c
/petsc/src/mat/impls/aij/mpi/crl/mcrl.c
/petsc/src/mat/impls/aij/mpi/fdmpiaij.c
/petsc/src/mat/impls/aij/mpi/mmaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/aij/mpi/mpiov.c
/petsc/src/mat/impls/aij/mpi/mpiptap.c
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/mpi/pastix/pastix.c
/petsc/src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aijfact.c
/petsc/src/mat/impls/aij/seq/bas/basfactor.c
/petsc/src/mat/impls/aij/seq/bas/spbas.c
/petsc/src/mat/impls/aij/seq/csrperm/csrperm.c
/petsc/src/mat/impls/aij/seq/ij.c
/petsc/src/mat/impls/aij/seq/inode.c
/petsc/src/mat/impls/aij/seq/matlab/aijmatlab.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c
/petsc/src/mat/impls/aij/seq/seqcusp/aijcusp.cu
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/aij/seq/superlu/superlu.c
/petsc/src/mat/impls/aij/seq/symtranspose.c
/petsc/src/mat/impls/baij/mpi/baijov.c
/petsc/src/mat/impls/baij/mpi/mmbaij.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/baij/seq/baij2.c
/petsc/src/mat/impls/baij/seq/baijfact.c
/petsc/src/mat/impls/baij/seq/baijfact2.c
/petsc/src/mat/impls/baij/seq/baijfact3.c
/petsc/src/mat/impls/cufft/cufft.cu
/petsc/src/mat/impls/dense/mpi/mmdense.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/fft/fftw/fftw.c
/petsc/src/mat/impls/is/matis.c
/petsc/src/mat/impls/maij/maij.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/mpi/sbaijov.c
/petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij2.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact2.c
/petsc/src/mat/impls/shell/shellcnv.c
/petsc/src/mat/order/sorder.c
/petsc/src/mat/partition/impls/chaco/chaco.c
/petsc/src/mat/partition/impls/party/party.c
/petsc/src/mat/partition/impls/scotch/scotch.c
/petsc/src/mat/partition/partition.c
/petsc/src/mat/utils/axpy.c
/petsc/src/mat/utils/pheap.c
/petsc/src/snes/examples/tutorials/ex30.c
/petsc/src/snes/examples/tutorials/ex5s.c
/petsc/src/snes/impls/composite/snescomposite.c
/petsc/src/snes/impls/ms/ms.c
/petsc/src/snes/impls/multiblock/multiblock.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/vi/rs/virs.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesut.c
/petsc/src/sys/classes/draw/interface/draw.c
/petsc/src/sys/classes/draw/utils/hists.c
/petsc/src/sys/classes/viewer/impls/ascii/filev.c
/petsc/src/sys/classes/viewer/impls/binary/binv.c
/petsc/src/sys/dll/reg.c
/petsc/src/sys/error/fp.c
/petsc/src/sys/fileio/fretrieve.c
/petsc/src/sys/fileio/ftest.c
/petsc/src/sys/ftn-custom/zutils.c
/petsc/src/sys/objects/aoptions.c
/petsc/src/sys/objects/fcallback.c
/petsc/src/sys/objects/options.c
/petsc/src/sys/objects/prefix.c
/petsc/src/sys/objects/subcomm.c
/petsc/src/sys/objects/tagm.c
/petsc/src/sys/threadcomm/examples/tutorials/ex2.c
/petsc/src/sys/threadcomm/interface/threadcomm.c
/petsc/src/sys/utils/ctable.c
/petsc/src/sys/utils/mpimesg.c
/petsc/src/sys/utils/mpiu.c
/petsc/src/sys/utils/str.c
/petsc/src/sys/yaml/yamlimpls.c
/petsc/src/tao/constrained/impls/ipm/ipm.c
/petsc/src/tao/leastsquares/impls/pounders/pounders.c
/petsc/src/tao/pde_constrained/examples/tutorials/elliptic.c
/petsc/src/tao/unconstrained/impls/neldermead/neldermead.c
/petsc/src/ts/characteristic/impls/da/slda.c
/petsc/src/ts/characteristic/interface/characteristic.c
/petsc/src/ts/event/tsevent.c
/petsc/src/ts/examples/tests/ex10.c
/petsc/src/ts/examples/tests/ex22.c
/petsc/src/ts/examples/tests/ex3.c
/petsc/src/vec/is/ao/impls/basic/aobasic.c
/petsc/src/vec/is/ao/impls/mapping/aomapping.c
/petsc/src/vec/is/ao/impls/memscalable/aomemscalable.c
/petsc/src/vec/is/is/utils/f90-custom/ziscoloringf90.c
/petsc/src/vec/is/is/utils/ftn-custom/ziscoloringf.c
/petsc/src/vec/is/is/utils/iscoloring.c
/petsc/src/vec/is/is/utils/isdiff.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
/petsc/src/vec/is/sf/impls/window/sfwindow.c
/petsc/src/vec/is/sf/interface/sf.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/is/utils/pmap.c
/petsc/src/vec/is/utils/vsectionis.c
/petsc/src/vec/vec/examples/tests/ex24.c
/petsc/src/vec/vec/examples/tutorials/ex9.c
/petsc/src/vec/vec/impls/mpi/pbvec.c
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/interface/f90-custom/zvectorf90.c
/petsc/src/vec/vec/utils/vinv.c
89a6d35525-Nov-2014 Satish Balay <balay@mcs.anl.gov>

configure: when using _GNU_SOURCE etc.. (in tests) - first check if its defined.


/petsc/bin/maint/generateetags.py
/petsc/bin/petscnagupgrade.py
/petsc/conf/rules
/petsc/config/BuildSystem/config/framework.py
/petsc/config/BuildSystem/config/packages/BlasLapack.py
/petsc/config/BuildSystem/config/setCompilers.py
utilities/missing.py
/petsc/include/petscblaslapack.h
/petsc/src/dm/impls/da/gr2.c
/petsc/src/docs/website/download/index.html
/petsc/src/ksp/ksp/utils/schurm.c
/petsc/src/mat/examples/tests/ex180.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/baij/seq/baij.h
/petsc/src/mat/impls/maij/maij.c
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/utils/axpy.c
/petsc/src/snes/interface/snesj2.c
/petsc/src/sys/objects/pname.c
/petsc/src/tao/interface/fdiff.c
/petsc/src/vec/is/sf/impls/window/sfwindow.c
/petsc/src/vec/is/sf/interface/sf.c
/petsc/src/vec/is/utils/pmap.c
6e709e5a19-Nov-2014 Barry Smith <bsmith@mcs.anl.gov>

make configure more robust to corrupted .git directory
remove configure handling of hg, svn, and cvs


/petsc/bin/petscnagupgrade.py
/petsc/conf/rules
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/BlasLapack.py
/petsc/config/BuildSystem/config/packages/cuda.py
/petsc/config/BuildSystem/config/packages/cusp.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/BuildSystem/config/sourceControl.py
options/petscclone.py
/petsc/include/petscblaslapack.h
/petsc/include/petsccusp.h
/petsc/include/petscmat.h
/petsc/include/petscvec.h
/petsc/src/dm/impls/da/gr2.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/website/download/index.html
/petsc/src/docs/website/petsc-20.html
/petsc/src/ksp/ksp/examples/tutorials/ex46.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex46_aijcusp.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex46_aijcusparse.out
/petsc/src/ksp/ksp/utils/schurm.c
/petsc/src/mat/examples/tests/ex180.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/impls/aij/mpi/clique/clique.cxx
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/mpi/pastix/pastix.c
/petsc/src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aijfact.c
/petsc/src/mat/impls/aij/seq/essl/essl.c
/petsc/src/mat/impls/aij/seq/lusol/lusol.c
/petsc/src/mat/impls/aij/seq/matlab/aijmatlab.c
/petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c
/petsc/src/mat/impls/aij/seq/seqcusp/aijcusp.cu
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/aij/seq/superlu/superlu.c
/petsc/src/mat/impls/aij/seq/umfpack/umfpack.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/baij/seq/baij.h
/petsc/src/mat/impls/baij/seq/baijfact.c
/petsc/src/mat/impls/dense/mpi/mpidense.h
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/elemental/matelem.cxx
/petsc/src/mat/impls/maij/maij.c
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/utils/axpy.c
/petsc/src/snes/interface/snesj2.c
/petsc/src/sys/objects/pname.c
/petsc/src/tao/interface/fdiff.c
/petsc/src/vec/is/utils/pmap.c
/petsc/src/vec/vec/impls/seq/seqcusp/veccusp.cu
/petsc/src/vec/vec/utils/matlab/gcreatev.c
/petsc/systems/Apple/OSX/bin/makeall
/petsc/systems/Apple/iOS/PETSc/PETSc.xcodeproj/project.pbxproj
/petsc/systems/Apple/iOS/bin/arch-ios-simulator.py
/petsc/systems/Apple/iOS/bin/iosbuilder.py
/petsc/systems/Apple/iOS/bin/makeall
/petsc/tutorials/HandsOnExercise.html
854ce69b15-Nov-2014 Barry Smith <bsmith@mcs.anl.gov>

convert some PetscMalloc() to PetscMalloc1()
remove unneeded () in first argument to PetscMalloc/Calloc1()
fixes for MATLAB examples


/petsc/bin/petscnagupgrade.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/BlasLapack.py
/petsc/config/BuildSystem/config/packages/cuda.py
/petsc/config/BuildSystem/config/packages/cusp.py
/petsc/config/BuildSystem/config/setCompilers.py
Regression.py
/petsc/include/petscblaslapack.h
/petsc/include/petscbt.h
/petsc/include/petscmat.h
/petsc/include/petscsys.h
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/examples/tests/ex8.c
/petsc/src/dm/examples/tests/makefile
/petsc/src/dm/examples/tutorials/ex1.c
/petsc/src/dm/examples/tutorials/ex6.c
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/da/da.c
/petsc/src/dm/impls/da/da1.c
/petsc/src/dm/impls/da/dadd.c
/petsc/src/dm/impls/da/dagetelem.c
/petsc/src/dm/impls/da/dainterp.c
/petsc/src/dm/impls/da/daltol.c
/petsc/src/dm/impls/da/dapreallocate.c
/petsc/src/dm/impls/da/fdda.c
/petsc/src/dm/impls/da/usfft/matusfft.c
/petsc/src/dm/impls/network/network.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexdistribute.c
/petsc/src/dm/impls/plex/plexgenerate.c
/petsc/src/dm/impls/plex/plexgmsh.c
/petsc/src/dm/impls/plex/plexlabel.c
/petsc/src/dm/impls/plex/plexpartition.c
/petsc/src/dm/impls/plex/plexrefine.c
/petsc/src/dm/impls/plex/plexreorder.c
/petsc/src/dm/impls/plex/plexsubmesh.c
/petsc/src/dm/impls/plex/plextree.c
/petsc/src/dm/impls/plex/plexvtk.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmget.c
/petsc/src/docs/website/petsc-20.html
/petsc/src/ksp/ksp/examples/tests/ex10.c
/petsc/src/ksp/ksp/examples/tests/ex11.c
/petsc/src/ksp/ksp/examples/tests/ex30.c
/petsc/src/ksp/ksp/examples/tests/ex32.c
/petsc/src/ksp/ksp/examples/tests/ex4.c
/petsc/src/ksp/ksp/examples/tutorials/ex10.c
/petsc/src/ksp/ksp/examples/tutorials/ex42.c
/petsc/src/ksp/ksp/examples/tutorials/ex43.c
/petsc/src/ksp/ksp/examples/tutorials/ex46.c
/petsc/src/ksp/ksp/examples/tutorials/ex49.c
/petsc/src/ksp/ksp/examples/tutorials/ex51.c
/petsc/src/ksp/ksp/examples/tutorials/ex56.c
/petsc/src/ksp/ksp/examples/tutorials/ex59.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex46_aijcusp.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex46_aijcusparse.out
/petsc/src/ksp/ksp/impls/gcr/gcr.c
/petsc/src/ksp/ksp/impls/gmres/borthog2.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/impls/gmres/fgmres/fgmres.c
/petsc/src/ksp/ksp/impls/gmres/gmres.c
/petsc/src/ksp/ksp/impls/gmres/lgmres/lgmres.c
/petsc/src/ksp/ksp/impls/gmres/pgmres/pgmres.c
/petsc/src/ksp/ksp/interface/iguess.c
/petsc/src/ksp/pc/impls/asm/asm.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddcfetidp.c
/petsc/src/ksp/pc/impls/bddc/bddcgraph.c
/petsc/src/ksp/pc/impls/bddc/bddcnullspace.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bjacobi/bjacobi.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/gasm/gasm.c
/petsc/src/ksp/pc/impls/is/nn/nn.c
/petsc/src/ksp/pc/impls/is/pcis.c
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/ksp/pc/impls/parms/parms.c
/petsc/src/ksp/pc/impls/redistribute/redistribute.c
/petsc/src/ksp/pc/impls/tfs/tfs.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/coarsen/impls/hem/hem.c
/petsc/src/mat/color/impls/minpack/color.c
/petsc/src/mat/color/impls/natural/natural.c
/petsc/src/mat/color/utils/bipartite.c
/petsc/src/mat/color/utils/valid.c
/petsc/src/mat/examples/tests/ex116.c
/petsc/src/mat/examples/tests/ex118.c
/petsc/src/mat/examples/tests/ex120.c
/petsc/src/mat/examples/tests/ex129.c
/petsc/src/mat/examples/tests/ex144.c
/petsc/src/mat/examples/tests/ex146.c
/petsc/src/mat/examples/tests/ex152.c
/petsc/src/mat/examples/tests/ex32.c
/petsc/src/mat/examples/tests/ex99.c
/petsc/src/mat/examples/tutorials/ex12.c
/petsc/src/mat/examples/tutorials/ex5.c
/petsc/src/mat/impls/adj/mpi/mpiadj.c
/petsc/src/mat/impls/aij/mpi/clique/clique.cxx
/petsc/src/mat/impls/aij/mpi/crl/mcrl.c
/petsc/src/mat/impls/aij/mpi/fdmpiaij.c
/petsc/src/mat/impls/aij/mpi/mmaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/aij/mpi/mpiov.c
/petsc/src/mat/impls/aij/mpi/mpiptap.c
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/mpi/pastix/pastix.c
/petsc/src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aijfact.c
/petsc/src/mat/impls/aij/seq/bas/basfactor.c
/petsc/src/mat/impls/aij/seq/bas/spbas.c
/petsc/src/mat/impls/aij/seq/csrperm/csrperm.c
/petsc/src/mat/impls/aij/seq/essl/essl.c
/petsc/src/mat/impls/aij/seq/ij.c
/petsc/src/mat/impls/aij/seq/inode.c
/petsc/src/mat/impls/aij/seq/lusol/lusol.c
/petsc/src/mat/impls/aij/seq/matlab/aijmatlab.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c
/petsc/src/mat/impls/aij/seq/seqcusp/aijcusp.cu
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/aij/seq/superlu/superlu.c
/petsc/src/mat/impls/aij/seq/symtranspose.c
/petsc/src/mat/impls/aij/seq/umfpack/umfpack.c
/petsc/src/mat/impls/baij/mpi/baijov.c
/petsc/src/mat/impls/baij/mpi/mmbaij.c
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/petsc/src/mat/impls/cufft/cufft.cu
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/petsc/src/mat/impls/is/matis.c
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/petsc/src/mat/impls/shell/shellcnv.c
/petsc/src/mat/interface/dlregismat.c
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/petsc/src/mat/order/sorder.c
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57ea55fd11-Nov-2014 Jed Brown <jed@jedbrown.org>

Merge branch 'jed/config-env-paths'

Default system paths (like /usr) are now searched by default when
--with-$package.

* jed/config-env-paths:
config: search default paths by default
config: se

Merge branch 'jed/config-env-paths'

Default system paths (like /usr) are now searched by default when
--with-$package.

* jed/config-env-paths:
config: search default paths by default
config: set PETSC_ARCH in environment

show more ...


/petsc/bin/maint/generateetags.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/hwloc.py
/petsc/config/BuildSystem/config/packages/hypre.py
/petsc/config/BuildSystem/config/packages/sowing.py
options/arch.py
/petsc/src/ksp/ksp/examples/tests/ex43.c
/petsc/src/ksp/ksp/examples/tests/makefile
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ca45163607-Nov-2014 Jed Brown <jed@jedbrown.org>

config: set PETSC_ARCH in environment

ctetgen and maybe others depend on PETSC_ARCH. When we use PETSC_ARCH
from the command line or script name, we should ensure that the
environment version is ne

config: set PETSC_ARCH in environment

ctetgen and maybe others depend on PETSC_ARCH. When we use PETSC_ARCH
from the command line or script name, we should ensure that the
environment version is never used accidentally.

show more ...


utilities/arch.py
0836fa8104-Nov-2014 Barry Smith <bsmith@mcs.anl.gov>

Merge branch 'maint'


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Configure.py
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/petsc/src/mat/examples/tests/ex172.c
/petsc/src/mat/examples/tests/ex48.c
/petsc/src/mat/examples/tests/ex86.c
/petsc/src/mat/examples/tests/ex87.c
/petsc/src/mat/examples/tests/ex9.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex139_1.out
/petsc/src/mat/examples/tests/output/ex172.out
/petsc/src/mat/examples/tests/output/ex86_1.out
/petsc/src/mat/examples/tests/output/ex86_2.out
/petsc/src/mat/examples/tests/output/ex86_3.out
/petsc/src/mat/examples/tests/output/ex9_3_baij.out
/petsc/src/mat/examples/tests/output/ex9_3_sbaij.out
/petsc/src/mat/examples/tests/output/ex9_4_baij.out
/petsc/src/mat/examples/tests/output/ex9_4_sbaij.out
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.h
/petsc/src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c
/petsc/src/mat/impls/aij/seq/seqcusp/aijcusp.cu
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/aij/seq/superlu/superlu.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/mpi/mpibaij.h
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/baij/seq/baij.h
/petsc/src/mat/impls/baij/seq/baijfact.c
/petsc/src/mat/impls/baij/seq/baijfact13.c
/petsc/src/mat/impls/baij/seq/baijsolvnat.c
/petsc/src/mat/impls/is/matis.c
/petsc/src/mat/impls/mffd/wp.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.h
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/ftn-custom/zmatrixf.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/order/amd/amd.c
/petsc/src/mat/partition/impls/scotch/scotch.c
/petsc/src/mat/utils/axpy.c
/petsc/src/mat/utils/gcreate.c
/petsc/src/snes/examples/tests/makefile
/petsc/src/snes/examples/tutorials/ex12.c
/petsc/src/snes/examples/tutorials/ex28.c
/petsc/src/snes/examples/tutorials/ex5f.F
/petsc/src/snes/examples/tutorials/ex5f90.F
/petsc/src/snes/examples/tutorials/ex5f90t.F
/petsc/src/snes/examples/tutorials/ex62.c
/petsc/src/snes/examples/tutorials/ex66.c
/petsc/src/snes/examples/tutorials/ex7.c
/petsc/src/snes/examples/tutorials/ex74f.F90
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/network/pflow/PFReadData.c
/petsc/src/snes/examples/tutorials/network/pflow/pf.c
/petsc/src/snes/examples/tutorials/output/ex15_lag_jac.out
/petsc/src/snes/examples/tutorials/output/ex15_lag_pc.out
/petsc/src/snes/examples/tutorials/output/ex19_10.out
/petsc/src/snes/examples/tutorials/output/ex19_13.out
/petsc/src/snes/examples/tutorials/output/ex19_17.out
/petsc/src/snes/examples/tutorials/output/ex19_18.out
/petsc/src/snes/examples/tutorials/output/ex19_6.out
/petsc/src/snes/examples/tutorials/output/ex19_7.out
/petsc/src/snes/examples/tutorials/output/ex19_9.out
/petsc/src/snes/examples/tutorials/output/ex19_ngmres_fas_ms.out
/petsc/src/snes/examples/tutorials/output/ex19_tut_1.out.html
/petsc/src/snes/examples/tutorials/output/ex19_tut_2.out.html
/petsc/src/snes/examples/tutorials/output/ex62_quad_q2p1_full.out
/petsc/src/snes/examples/tutorials/output/ex62_quad_q2q1_full.out
/petsc/src/snes/impls/fas/fasfunc.c
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/impls/tr/tr.c
/petsc/src/snes/impls/vi/vi.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesob.c
/petsc/src/snes/interface/snesut.c
/petsc/src/snes/linesearch/impls/basic/linesearchbasic.c
/petsc/src/snes/linesearch/impls/bt/linesearchbt.c
/petsc/src/snes/linesearch/impls/cp/linesearchcp.c
/petsc/src/snes/linesearch/impls/l2/linesearchl2.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/sys/classes/draw/impls/opengl/openglops.c
/petsc/src/sys/classes/draw/utils/lg.c
/petsc/src/sys/classes/viewer/impls/mathematica/mathematica.c
/petsc/src/sys/classes/viewer/impls/matlab/vmatlab.c
/petsc/src/sys/error/adebug.c
/petsc/src/sys/error/signal.c
/petsc/src/sys/examples/tutorials/ex3.c
/petsc/src/sys/fileio/mprint.c
/petsc/src/sys/objects/aoptions.c
/petsc/src/sys/objects/options.c
/petsc/src/sys/threadcomm/impls/pthread/tcpthread.c
/petsc/src/sys/threadcomm/interface/threadcomm.c
/petsc/src/sys/utils/sseenabled.c
/petsc/src/sys/utils/str.c
/petsc/src/tao/bound/examples/tutorials/plate2f.F
/petsc/src/tao/bound/impls/bqpip/bqpip.c
/petsc/src/tao/bound/impls/gpcg/gpcg.c
/petsc/src/tao/bound/utils/isutil.c
/petsc/src/tao/complementarity/impls/ssls/ssls.c
/petsc/src/tao/constrained/impls/ipm/ipm.c
/petsc/src/tao/interface/taosolver.c
/petsc/src/tao/leastsquares/impls/pounders/pounders.c
/petsc/src/tao/linesearch/impls/armijo/armijo.c
/petsc/src/tao/linesearch/impls/owarmijo/owarmijo.c
/petsc/src/tao/linesearch/interface/taolinesearch.c
/petsc/src/tao/matrix/lmvmmat.c
/petsc/src/tao/pde_constrained/examples/tutorials/elliptic.c
/petsc/src/tao/pde_constrained/examples/tutorials/hyperbolic.c
/petsc/src/tao/pde_constrained/examples/tutorials/parabolic.c
/petsc/src/tao/pde_constrained/impls/lcl/lcl.c
/petsc/src/tao/unconstrained/examples/tutorials/eptorsion2f.F
/petsc/src/tao/unconstrained/examples/tutorials/rosenbrock1f.F
/petsc/src/tao/unconstrained/impls/bmrm/bmrm.c
/petsc/src/tao/unconstrained/impls/cg/taocg.c
/petsc/src/tao/unconstrained/impls/neldermead/neldermead.c
/petsc/src/tao/unconstrained/impls/nls/nls.c
/petsc/src/tao/unconstrained/impls/ntl/ntl.c
/petsc/src/tao/unconstrained/impls/ntr/ntr.c
/petsc/src/tao/unconstrained/impls/owlqn/owlqn.c
/petsc/src/ts/examples/tutorials/ex10.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/ex31.c
/petsc/src/ts/examples/tutorials/output/ex11_0.out
/petsc/src/ts/examples/tutorials/output/ex11_1.out
/petsc/src/ts/examples/tutorials/output/ex11_2.out
/petsc/src/ts/examples/tutorials/output/ex11_3.out
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/petsc/src/ts/examples/tutorials/output/ex11_5.out
/petsc/src/ts/examples/tutorials/output/ex11_6.out
/petsc/src/ts/examples/tutorials/output/ex11_9.out
/petsc/src/ts/examples/tutorials/output/ex11_sw_0.out
/petsc/src/ts/impls/eimex/eimex.c
/petsc/src/ts/impls/implicit/sundials/sundials.c
/petsc/src/ts/impls/pseudo/posindep.c
/petsc/src/vec/is/ao/impls/mapping/aomapping.c
/petsc/src/vec/is/sf/interface/sf.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/is/utils/vsectionis.c
/petsc/src/vec/vec/impls/mpi/mpicusp/mpicusp.cu
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/impls/seq/seqcusp/cuspvecimpl.h
/petsc/src/vec/vec/impls/seq/seqcusp/veccusp.cu
/petsc/src/vec/vec/impls/seq/seqcusp/vecscattercusp.cu
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/vpscat.h
/petsc/src/vec/vec/utils/vscat.c
/petsc/systems/Apple/OSX/bin/arch-osx-debug.py
/petsc/systems/Apple/OSX/bin/arch-osx-release.py
/petsc/systems/Apple/OSX/bin/makeall
/petsc/systems/Apple/OSX/bin/makeframework
/petsc/systems/Apple/iOS/PETSc/PETSc.xcodeproj/project.pbxproj
/petsc/systems/Apple/iOS/bin/arch-ios-simulator.py
/petsc/systems/Apple/iOS/bin/iosbuilder.py
/petsc/systems/Apple/iOS/bin/makeall
/petsc/systems/Apple/iOS/bin/makeframework
/petsc/systems/Apple/iOS/examples/Basic/examples.xcodeproj/project.pbxproj
/petsc/systems/Apple/iOS/examples/SwiftExample/SwiftExample/AppDelegate.swift
/petsc/systems/Apple/iOS/examples/SwiftExample/SwiftExample/Base.lproj/LaunchScreen.xib
/petsc/systems/Apple/iOS/examples/SwiftExample/SwiftExample/Base.lproj/Main.storyboard
/petsc/systems/Apple/iOS/examples/SwiftExample/SwiftExample/Info.plist
/petsc/systems/Apple/iOS/examples/SwiftExample/SwiftExample/ViewController.swift
/petsc/systems/Apple/iOS/examples/testopengl/examples.xcodeproj/project.pbxproj
/petsc/tutorials/HandsOnExercise.html
7deb5ab304-Nov-2014 Barry Smith <bsmith@mcs.anl.gov>

add option to turn off checking prefetching


Configure.py
/petsc/include/finclude/ftn-custom/petscdmplex.h90
/petsc/include/petscerror.h
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/ksp/utils/schurm.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/snes/impls/fas/fasfunc.c
/petsc/src/snes/linesearch/impls/bt/linesearchbt.c
/petsc/src/sys/classes/viewer/impls/mathematica/mathematica.c
/petsc/src/sys/classes/viewer/impls/matlab/vmatlab.c
/petsc/src/sys/error/signal.c
/petsc/src/tao/interface/taosolver.c
/petsc/src/ts/impls/pseudo/posindep.c
/petsc/src/vec/is/ao/impls/mapping/aomapping.c
/petsc/tutorials/HandsOnExercise.html
fce8857e23-Oct-2014 Barry Smith <bsmith@mcs.anl.gov>

Merge branch 'barry/fix-ftn-custom-continuation' into maint


packages/sowing.py
/petsc/include/finclude/ftn-custom/petscdmplex.h90
/petsc/include/finclude/ftn-custom/petscis.h90
/petsc/include/finclude/ftn-custom/petscmat.h90
/petsc/include/finclude/ftn-custom/petscvec.h90
/petsc/src/mat/examples/tests/ex48.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/baij/seq/baij.h
/petsc/src/mat/impls/baij/seq/baijfact.c
/petsc/src/mat/impls/baij/seq/baijfact13.c
/petsc/src/mat/impls/baij/seq/baijsolvnat.c
51bbcd5e22-Oct-2014 Barry Smith <bsmith@mcs.anl.gov>

ML does not depend on having a Fortran compiler, why was this in here


packages/ml.py
/petsc/include/petsclog.h
/petsc/src/dm/impls/da/dagtol.c
/petsc/src/dm/impls/da/gr1.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/utils/axpy.c
/petsc/src/sys/examples/tutorials/ex3.c

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