ci: add kokkos to a couple of tests

CI: test BAMG and HPDDM w/o shared libraries

fix errors with 32bit gcc-7.5.0 checkPIC always works without -fPIC, only runtime errors

not ok diff-sys_tests-ex56f_no-yaml # Error code: 1
# > [0]PETSC ERROR: MPI error 805913861 Invalid communica

fix errors with 32bit gcc-7.5.0 checkPIC always works without -fPIC, only runtime errors

not ok diff-sys_tests-ex56f_no-yaml # Error code: 1
# > [0]PETSC ERROR: MPI error 805913861 Invalid communicator, error stack:
# > PMPI_Comm_rank(106): MPI_Comm_rank(comm=0x0, rank=0xfffa8854) failed

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configure add option with-mpi-f90module-visibility

config: change HIPCC to HIPC, and HIPCCFLAGS to HIPFLAGS

config/examples: fix use of HIPOPTFLAGS

Remove the now-unneeded -Wno-unused-function

CI: arch-ci-linux-gcc-complex-opt.py -> arch-ci-linux-gcc-complex-opt-32bit.py

Fix bug in ex4.c Code assumed that floating point product would produce exact result

/spend 3h
Reported-by: Gitlab CI

configure: remove --known-mpi-long-double type options and have HAVE_MPI_C_DOUBLE_COMPLEX set on successful compile [no need for run]

running binaries via configure on windows is broken as its using

configure: remove --known-mpi-long-double type options and have HAVE_MPI_C_DOUBLE_COMPLEX set on successful compile [no need for run]

running binaries via configure on windows is broken as its using cygwin path for the binary [and the checkRun code is not needed anyway]

Reported-by: Milan Pelletier <milan.pelletier@protonmail.com>

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Merge remote-tracking branch 'origin/release'

Fix compiler warnings when using revolve with 64bit indices

Commit-type: bug-fix
/spend 2h
Reported-by: Anton Glazkov <anton.glazkov@chch.ox.ac.uk>

slepc4py has been imported into SLEPc source tree

CI: update linux-cuda-double to use -j1 [to avoid resource errors at runtime]
and swap with linux-cuda-double-64idx in stage-3

CI: test Mmg and ParMmg on two workers

Merge remote-tracking branch 'origin/release'

Implementation of HIP for sys and vec packages

This implements the vec functionality including tests.
In the sys level, we handle the initialization issues, but it is tested
at the vec level.

Works

Implementation of HIP for sys and vec packages

This implements the vec functionality including tests.
In the sys level, we handle the initialization issues, but it is tested
at the vec level.

Works with ROCm 3.9.

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CI: --download-hpddm on osx-cxx-pkgs-opt

ci: slepc got removed incorrectly in ccd2fb5e593896df70c979f40999580e2eff7d49

Reported-by: Jose E. Roman <jroman@dsic.upv.es>

Fix petsc4py dependencies on PETSc includes, if any change it reruns cython

This also includes configuring with a new PETSC_ARCH

Also doesn't recompile the C code everytime make all is run when it

Fix petsc4py dependencies on PETSc includes, if any change it reruns cython

This also includes configuring with a new PETSC_ARCH

Also doesn't recompile the C code everytime make all is run when it does not need to

Remove --download-petsc4py that makes a symbolic link of src/binding/petsc4py
Instead support --with-petsc4py that just builds petsc4py in place without the link

Lisandro Dalcin provided the fix for python 2 and OSX hardening requirement

Commit-type: bug-fix
/spend 2.5h
Thanks-to: Satish Balay <balay@mcs.anl.gov>
Thanks-to: Lisandro Dalcin

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Merge remote-tracking branch 'origin/release'

Update slepc to use current master

CI: --download-slepc4py in SLEPc configure

Rename sundials.py to sundials2.py to indicate the age of the package.

Also print a message age configure time indicating the age of the SUNDIALs used by PETSc.

Commit-type: documentation
/spend 10

Rename sundials.py to sundials2.py to indicate the age of the package.

Also print a message age configure time indicating the age of the SUNDIALs used by PETSc.

Commit-type: documentation
/spend 10m
Reported-by: Jed Brown <jed@jedbrown.org>

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