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df082c0e27-Jul-2024 Pierre Jolivet <pierre@joliv.et>

MatSchurComplementComputeExplicitOperator: return a MATDENSE by default


changes/dev.rst
/petsc/include/petsc/private/matimpl.h
/petsc/src/ksp/ksp/utils/schurm/schurm.c
/petsc/src/mat/impls/aij/seq/spqr/aijspqr.c
/petsc/src/mat/impls/composite/mcomposite.c
/petsc/src/mat/impls/normal/normm.c
/petsc/src/mat/impls/normal/normmh.c
/petsc/src/mat/impls/shell/shell.c
/petsc/src/mat/impls/shell/shell.h
/petsc/src/mat/impls/transpose/htransm.c
/petsc/src/mat/impls/transpose/transm.c
/petsc/src/mat/utils/axpy.c
/petsc/src/mat/utils/convert.c
/petsc/src/mat/utils/isltog.c
/petsc/src/snes/tutorials/ex62.c
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/impls/nest/vecnest.c
/petsc/src/vec/vec/impls/seq/bvec2.c
32e0375129-Jul-2024 Satish Balay <balay@mcs.anl.gov>

Merge branch 'jose/deprecate-petsc-default' into 'main'

Fix usage of deprecated PETSC_DEFAULT

See merge request petsc/petsc!7707


changes/dev.rst
/petsc/include/petsc/private/matimpl.h
/petsc/include/petscksp.h
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/PC.pyx
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/petscpc.pxi
/petsc/src/dm/dt/tests/ex13.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexpartition.c
/petsc/src/ksp/ksp/impls/tsirm/tsirm.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/tests/ex21.c
/petsc/src/ksp/ksp/tests/ex54.c
/petsc/src/ksp/ksp/tutorials/ex15f.F90
/petsc/src/ksp/ksp/tutorials/ex18.c
/petsc/src/ksp/ksp/tutorials/ex1f.F90
/petsc/src/ksp/ksp/tutorials/ex2.c
/petsc/src/ksp/ksp/tutorials/ex23.c
/petsc/src/ksp/ksp/tutorials/ex27.c
/petsc/src/ksp/ksp/tutorials/ex2f.F90
/petsc/src/ksp/ksp/tutorials/ex4.c
/petsc/src/ksp/ksp/tutorials/ex52f.F90
/petsc/src/ksp/ksp/tutorials/ex6.c
/petsc/src/ksp/ksp/tutorials/ex62.c
/petsc/src/ksp/ksp/tutorials/ex7.c
/petsc/src/ksp/ksp/tutorials/ex71.c
/petsc/src/ksp/ksp/tutorials/ex7f.F90
/petsc/src/ksp/ksp/tutorials/ex8.c
/petsc/src/ksp/ksp/tutorials/ex86.c
/petsc/src/ksp/ksp/utils/dm/dmproject.c
/petsc/src/ksp/ksp/utils/lmvm/dense/denseqn.c
/petsc/src/ksp/ksp/utils/lmvm/lmvmimpl.c
/petsc/src/ksp/ksp/utils/schurm/schurm.c
/petsc/src/ksp/pc/impls/bddc/bddcfetidp.c
/petsc/src/ksp/pc/impls/bddc/bddcnullspace.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcscalingbasic.c
/petsc/src/ksp/pc/impls/bddc/bddcschurs.c
/petsc/src/ksp/pc/impls/deflation/deflation.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/classical.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/h2opus/pch2opus.c
/petsc/src/ksp/pc/impls/hpddm/pchpddm.cxx
/petsc/src/ksp/pc/impls/lsc/lsc.c
/petsc/src/ksp/pc/impls/mat/pcmat.c
/petsc/src/ksp/pc/impls/mat/tests/ex1.c
/petsc/src/ksp/pc/impls/mg/gdsw.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/mg/mgfunc.c
/petsc/src/ksp/pc/impls/patch/pcpatch.c
/petsc/src/ksp/pc/impls/spai/ispai.c
/petsc/src/ksp/pc/impls/svd/svd.c
/petsc/src/ksp/pc/tests/ex5.c
/petsc/src/ksp/pc/tutorials/ex3.c
/petsc/src/ksp/pc/tutorials/ex4.c
/petsc/src/mat/graphops/coarsen/impls/misk/misk.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/composite/mcomposite.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/elemental/matelem.cxx
/petsc/src/mat/impls/h2opus/math2opussampler.hpp
/petsc/src/mat/interface/matproduct.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/tests/ex1.c
/petsc/src/mat/tests/ex102.c
/petsc/src/mat/tests/ex115.c
/petsc/src/mat/tests/ex123.c
/petsc/src/mat/tests/ex145.c
/petsc/src/mat/tests/ex154.c
/petsc/src/mat/tests/ex165.c
/petsc/src/mat/tests/ex195.c
/petsc/src/mat/tests/ex198.c
/petsc/src/mat/tests/ex202.c
/petsc/src/mat/tests/ex226.c
/petsc/src/mat/tests/ex23.c
/petsc/src/mat/tests/ex241.c
/petsc/src/mat/tests/ex242.c
/petsc/src/mat/tests/ex245.c
/petsc/src/mat/tests/ex250.c
/petsc/src/mat/tests/ex267.c
/petsc/src/mat/tests/ex32.c
/petsc/src/mat/tests/ex33.c
/petsc/src/mat/tests/ex34.c
/petsc/src/mat/tests/ex38.c
/petsc/src/mat/tests/ex39.c
/petsc/src/mat/tests/ex48.c
/petsc/src/mat/tests/ex59.c
/petsc/src/mat/tests/ex62.c
/petsc/src/mat/tests/ex66.c
/petsc/src/mat/tests/ex70.c
/petsc/src/mat/tests/ex74.c
/petsc/src/mat/tests/ex84.c
/petsc/src/snes/tests/ex17.c
/petsc/src/snes/tests/ex4.c
/petsc/src/snes/tutorials/ex1.c
/petsc/src/snes/tutorials/ex1f.F90
/petsc/src/snes/tutorials/ex3.c
/petsc/src/snes/tutorials/ex69.c
/petsc/src/snes/tutorials/ex70.c
/petsc/src/snes/tutorials/ex99.c
/petsc/src/sys/classes/viewer/interface/viewreg.c
/petsc/src/sys/classes/viewer/tests/ex4.c
/petsc/src/tao/constrained/impls/admm/admm.c
/petsc/src/tao/constrained/tutorials/tomographyADMM.c
/petsc/src/tao/leastsquares/impls/brgn/brgn.c
/petsc/src/tao/leastsquares/impls/pounders/pounders.c
/petsc/src/tao/pde_constrained/tutorials/parabolic.c
/petsc/src/tao/tutorials/ex4.c
/petsc/src/tao/unconstrained/tutorials/rosenbrock4.h
/petsc/src/ts/impls/explicit/rk/rk.c
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/tutorials/autodiff/ex16opt_ic.cxx
fb842aef29-Jul-2024 Jose E. Roman <jroman@dsic.upv.es>

Fix usage of deprecated PETSC_DEFAULT


changes/dev.rst
/petsc/include/petsc/private/matimpl.h
/petsc/src/dm/dt/tests/ex13.c
/petsc/src/dm/impls/plex/plexpartition.c
/petsc/src/ksp/ksp/impls/tsirm/tsirm.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/tests/ex21.c
/petsc/src/ksp/ksp/tests/ex54.c
/petsc/src/ksp/ksp/tutorials/ex15f.F90
/petsc/src/ksp/ksp/tutorials/ex18.c
/petsc/src/ksp/ksp/tutorials/ex1f.F90
/petsc/src/ksp/ksp/tutorials/ex2.c
/petsc/src/ksp/ksp/tutorials/ex23.c
/petsc/src/ksp/ksp/tutorials/ex27.c
/petsc/src/ksp/ksp/tutorials/ex2f.F90
/petsc/src/ksp/ksp/tutorials/ex4.c
/petsc/src/ksp/ksp/tutorials/ex52f.F90
/petsc/src/ksp/ksp/tutorials/ex6.c
/petsc/src/ksp/ksp/tutorials/ex62.c
/petsc/src/ksp/ksp/tutorials/ex7.c
/petsc/src/ksp/ksp/tutorials/ex71.c
/petsc/src/ksp/ksp/tutorials/ex7f.F90
/petsc/src/ksp/ksp/tutorials/ex8.c
/petsc/src/ksp/ksp/tutorials/ex86.c
/petsc/src/ksp/ksp/utils/dm/dmproject.c
/petsc/src/ksp/ksp/utils/lmvm/dense/denseqn.c
/petsc/src/ksp/ksp/utils/lmvm/lmvmimpl.c
/petsc/src/ksp/ksp/utils/schurm/schurm.c
/petsc/src/ksp/pc/impls/bddc/bddcfetidp.c
/petsc/src/ksp/pc/impls/bddc/bddcnullspace.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcscalingbasic.c
/petsc/src/ksp/pc/impls/bddc/bddcschurs.c
/petsc/src/ksp/pc/impls/deflation/deflation.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/classical.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/h2opus/pch2opus.c
/petsc/src/ksp/pc/impls/hpddm/pchpddm.cxx
/petsc/src/ksp/pc/impls/lsc/lsc.c
/petsc/src/ksp/pc/impls/mat/pcmat.c
/petsc/src/ksp/pc/impls/mat/tests/ex1.c
/petsc/src/ksp/pc/impls/mg/gdsw.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/mg/mgfunc.c
/petsc/src/ksp/pc/impls/spai/ispai.c
/petsc/src/ksp/pc/impls/svd/svd.c
/petsc/src/ksp/pc/tests/ex5.c
/petsc/src/ksp/pc/tutorials/ex3.c
/petsc/src/ksp/pc/tutorials/ex4.c
/petsc/src/mat/graphops/coarsen/impls/misk/misk.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/composite/mcomposite.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/elemental/matelem.cxx
/petsc/src/mat/impls/h2opus/math2opussampler.hpp
/petsc/src/mat/interface/matproduct.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/tests/ex1.c
/petsc/src/mat/tests/ex102.c
/petsc/src/mat/tests/ex115.c
/petsc/src/mat/tests/ex123.c
/petsc/src/mat/tests/ex145.c
/petsc/src/mat/tests/ex154.c
/petsc/src/mat/tests/ex165.c
/petsc/src/mat/tests/ex195.c
/petsc/src/mat/tests/ex198.c
/petsc/src/mat/tests/ex202.c
/petsc/src/mat/tests/ex226.c
/petsc/src/mat/tests/ex23.c
/petsc/src/mat/tests/ex241.c
/petsc/src/mat/tests/ex242.c
/petsc/src/mat/tests/ex245.c
/petsc/src/mat/tests/ex250.c
/petsc/src/mat/tests/ex267.c
/petsc/src/mat/tests/ex32.c
/petsc/src/mat/tests/ex33.c
/petsc/src/mat/tests/ex34.c
/petsc/src/mat/tests/ex38.c
/petsc/src/mat/tests/ex39.c
/petsc/src/mat/tests/ex48.c
/petsc/src/mat/tests/ex59.c
/petsc/src/mat/tests/ex62.c
/petsc/src/mat/tests/ex66.c
/petsc/src/mat/tests/ex70.c
/petsc/src/mat/tests/ex74.c
/petsc/src/mat/tests/ex84.c
/petsc/src/snes/tests/ex17.c
/petsc/src/snes/tests/ex4.c
/petsc/src/snes/tutorials/ex1.c
/petsc/src/snes/tutorials/ex1f.F90
/petsc/src/snes/tutorials/ex3.c
/petsc/src/snes/tutorials/ex69.c
/petsc/src/snes/tutorials/ex70.c
/petsc/src/snes/tutorials/ex99.c
/petsc/src/tao/constrained/impls/admm/admm.c
/petsc/src/tao/constrained/tutorials/tomographyADMM.c
/petsc/src/tao/leastsquares/impls/brgn/brgn.c
/petsc/src/tao/leastsquares/impls/pounders/pounders.c
/petsc/src/tao/pde_constrained/tutorials/parabolic.c
/petsc/src/tao/tutorials/ex4.c
/petsc/src/tao/unconstrained/tutorials/rosenbrock4.h
/petsc/src/ts/impls/explicit/rk/rk.c
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/tutorials/autodiff/ex16opt_ic.cxx
a1fd7ae318-Jul-2024 Barry Smith <bsmith@mcs.anl.gov>

Add length argument to PetscMPIErrorString() to prevent potential array overflow

Add test to loop over MPI error codes. Reveals known bug in MPICH implementation


changes/dev.rst
/petsc/include/petscerror.h
/petsc/src/sys/error/err.c
/petsc/src/sys/error/ftn-custom/zerrf.c
/petsc/src/sys/tests/ex74.c
/petsc/src/sys/tests/output/ex74_1.out
9f0612e411-Oct-2023 Barry Smith <bsmith@mcs.anl.gov>

Add shared memory support for PCMPI using both shmget() and MPI_Win_allocate_shared()


/petsc/config/BuildSystem/config/libraries.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/MUMPS.py
/petsc/config/BuildSystem/config/packages/hypre.py
/petsc/config/BuildSystem/config/packages/openmp.py
/petsc/config/BuildSystem/config/utilities/missing.py
/petsc/config/report_tests.py
changes/dev.rst
faq/index.rst
manual/additional.rst
manual/ksp.rst
manual/streams.rst
/petsc/include/petsc/mpiuni/mpi.h
/petsc/include/petscksp.h
/petsc/include/petscstring.h
/petsc/include/petscsys.h
/petsc/lib/petsc/bin/petscfreesharedmemory
/petsc/src/benchmarks/streams/MPIVersion.c
/petsc/src/benchmarks/streams/OpenMPVersion.c
/petsc/src/benchmarks/streams/OpenMPVersionLikeMPI.c
/petsc/src/benchmarks/streams/makefile
/petsc/src/ksp/ksp/impls/preonly/preonly.c
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/tutorials/ex1.c
/petsc/src/ksp/ksp/tutorials/ex88f.F90
/petsc/src/ksp/ksp/tutorials/ex89f.F90
/petsc/src/ksp/ksp/tutorials/output/ex1_mpi_linear_solver_server_1.out
/petsc/src/ksp/ksp/tutorials/output/ex1_mpi_linear_solver_server_1_shared_memory_false.out
/petsc/src/ksp/ksp/tutorials/output/ex2_help.out
/petsc/src/ksp/ksp/tutorials/output/ex88f_1.out
/petsc/src/ksp/ksp/tutorials/output/ex88f_2.out
/petsc/src/ksp/ksp/tutorials/output/ex89f_1.out
/petsc/src/ksp/ksp/tutorials/output/ex89f_2.out
/petsc/src/ksp/pc/impls/ksp/pcksp.c
/petsc/src/ksp/pc/impls/mpi/pcmpi.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/aijfact.c
/petsc/src/mat/impls/aij/seq/bas/basfactor.c
/petsc/src/mat/impls/aij/seq/kokkos/aijkok.kokkos.cxx
/petsc/src/mat/impls/aij/seq/matlab/aijmatlab.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/aij/seq/seqhashmat.h
/petsc/src/mat/impls/aij/seq/seqhipsparse/aijhipsparse.hip.cpp
/petsc/src/mat/impls/aij/seq/seqviennacl/aijviennacl.cxx
/petsc/src/mat/impls/baij/mpi/mpb_baij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/baij/seq/baijfact.c
/petsc/src/mat/impls/baij/seq/baijfact2.c
/petsc/src/mat/impls/baij/seq/baijfact3.c
/petsc/src/mat/impls/blockmat/seq/blockmat.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact2.c
/petsc/src/sys/classes/viewer/impls/ascii/asciiimpl.h
/petsc/src/sys/classes/viewer/impls/ascii/filev.c
/petsc/src/sys/classes/viewer/tutorials/ex3f.F90
/petsc/src/sys/classes/viewer/tutorials/output/ex3f_1.out
/petsc/src/sys/f90-mod/petscsys.h90
/petsc/src/sys/f90-mod/petscviewer.h90
/petsc/src/sys/fsrc/somefort.F90
/petsc/src/sys/mpiuni/mpi.c
/petsc/src/sys/objects/ftn-custom/zstart.c
/petsc/src/sys/objects/init.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/tests/ex69.c
/petsc/src/sys/tests/ex69f.F90
/petsc/src/sys/tests/output/ex69_1.out
/petsc/src/sys/tests/output/ex69f_1.out
/petsc/src/sys/tutorials/ex10f.F90
/petsc/src/sys/utils/server.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/impls/seq/bvec3.c
8a08536709-Nov-2023 Barry Smith <bsmith@mcs.anl.gov>

Add convinience routines PetscObjectContainerCompose() and PetscObjectContainerQuery


/petsc/.gitignore
/petsc/config/BuildSystem/config/framework.py
/petsc/config/BuildSystem/config/packages/hpddm.py
changes/dev.rst
/petsc/include/petsclandau.h
/petsc/include/petscmat.h
/petsc/include/petscsys.h
/petsc/lib/petsc/bin/maint/generatefortranstubs.py
/petsc/lib/petsc/bin/maint/getinterfaces.py
/petsc/src/binding/petsc4py/demo/legacy/poisson2d/poisson2d.py
/petsc/src/binding/petsc4py/test/test_object.py
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/plex/plexhdf5.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/tests/ex1f.F90
/petsc/src/ksp/ksp/tests/ex32.c
/petsc/src/ksp/ksp/tutorials/ex45.c
/petsc/src/ksp/ksp/tutorials/ex87.c
/petsc/src/ksp/ksp/utils/schurm/schurm.c
/petsc/src/ksp/pc/impls/mpi/pcmpi.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/snes/tutorials/ex5f.F90
/petsc/src/sys/objects/inherit.c
/petsc/src/ts/impls/eimex/eimex.c
/petsc/src/ts/tests/ex30.c
/petsc/src/ts/tests/output/ex30_0.out
/petsc/src/ts/tests/output/ex30_3d.out
/petsc/src/ts/tests/output/ex30_conserve.out
/petsc/src/ts/utils/dmplexlandau/plexland.c
/petsc/src/ts/utils/dmplexlandau/tutorials/ex1.c
/petsc/src/ts/utils/dmplexlandau/tutorials/ex2.c
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex1_0.out
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex1_re.out
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex1_sphere.out
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex2_sphere_3d.out
/petsc/src/vec/is/ao/impls/basic/aobasic.c
/petsc/src/vec/is/ao/impls/memscalable/aomemscalable.c
/petsc/src/vec/is/ao/interface/ao.c
/petsc/src/vec/is/ao/interface/aoreg.c
606f75f625-Jun-2024 Barry Smith <bsmith@mcs.anl.gov>

Deprecate PETSC_DEFAULT for Tao parameters with PETSC_CURRENT and add support for PETSC_DETEREMINE to use default


changes/dev.rst
/petsc/include/petsc/private/taoimpl.h
/petsc/include/petsc/private/tsimpl.h
/petsc/include/petsctao.h
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/TAO.pyx
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/TS.pyx
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/libpetsc4py.pyx
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/petsctao.pxi
/petsc/src/tao/bound/impls/blmvm/blmvm.c
/petsc/src/tao/bound/impls/bncg/bncg.c
/petsc/src/tao/bound/impls/bnk/bnk.c
/petsc/src/tao/bound/impls/bnk/bnls.c
/petsc/src/tao/bound/impls/bnk/bntl.c
/petsc/src/tao/bound/impls/tron/tron.c
/petsc/src/tao/bound/tutorials/output/jbearing2_17.out
/petsc/src/tao/bound/tutorials/output/jbearing2_18.out
/petsc/src/tao/bound/tutorials/output/plate2_1.out
/petsc/src/tao/bound/tutorials/output/plate2_10.out
/petsc/src/tao/bound/tutorials/output/plate2_11.out
/petsc/src/tao/bound/tutorials/output/plate2_12.out
/petsc/src/tao/bound/tutorials/output/plate2_13.out
/petsc/src/tao/bound/tutorials/output/plate2_14.out
/petsc/src/tao/bound/tutorials/output/plate2_15.out
/petsc/src/tao/bound/tutorials/output/plate2_16.out
/petsc/src/tao/bound/tutorials/output/plate2_17.out
/petsc/src/tao/bound/tutorials/output/plate2_18.out
/petsc/src/tao/bound/tutorials/output/plate2_19.out
/petsc/src/tao/bound/tutorials/output/plate2_2.out
/petsc/src/tao/bound/tutorials/output/plate2_20.out
/petsc/src/tao/bound/tutorials/output/plate2_20_alt.out
/petsc/src/tao/bound/tutorials/output/plate2_2_alt.out
/petsc/src/tao/bound/tutorials/output/plate2_3.out
/petsc/src/tao/bound/tutorials/output/plate2_4.out
/petsc/src/tao/bound/tutorials/output/plate2_5.out
/petsc/src/tao/bound/tutorials/output/plate2_6.out
/petsc/src/tao/bound/tutorials/output/plate2_6_alt.out
/petsc/src/tao/bound/tutorials/output/plate2_7.out
/petsc/src/tao/bound/tutorials/output/plate2_8.out
/petsc/src/tao/bound/tutorials/output/plate2_9.out
/petsc/src/tao/complementarity/impls/asls/asfls.c
/petsc/src/tao/complementarity/impls/asls/asils.c
/petsc/src/tao/complementarity/impls/ssls/ssfls.c
/petsc/src/tao/complementarity/impls/ssls/ssils.c
/petsc/src/tao/complementarity/tutorials/output/minsurf1_1.out
/petsc/src/tao/complementarity/tutorials/output/minsurf1_2.out
/petsc/src/tao/complementarity/tutorials/output/minsurf1_2_alt.out
/petsc/src/tao/constrained/impls/admm/admm.c
/petsc/src/tao/constrained/impls/almm/almm.c
/petsc/src/tao/constrained/impls/ipm/ipm.c
/petsc/src/tao/constrained/impls/ipm/pdipm.c
/petsc/src/tao/interface/taosolver.c
/petsc/src/tao/leastsquares/impls/brgn/brgn.c
/petsc/src/tao/leastsquares/impls/pounders/pounders.c
/petsc/src/tao/leastsquares/tests/chwirut2.c
/petsc/src/tao/pde_constrained/impls/lcl/lcl.c
/petsc/src/tao/pde_constrained/tutorials/elliptic.c
/petsc/src/tao/pde_constrained/tutorials/hyperbolic.c
/petsc/src/tao/pde_constrained/tutorials/parabolic.c
/petsc/src/tao/quadratic/impls/bqpip/bqpip.c
/petsc/src/tao/quadratic/impls/gpcg/gpcg.c
/petsc/src/tao/shell/taoshell.c
/petsc/src/tao/snes/taosnes.c
/petsc/src/tao/unconstrained/impls/bmrm/bmrm.c
/petsc/src/tao/unconstrained/impls/cg/taocg.c
/petsc/src/tao/unconstrained/impls/lmvm/lmvm.c
/petsc/src/tao/unconstrained/impls/lmvm/tests/output/ex1_0.out
/petsc/src/tao/unconstrained/impls/lmvm/tests/output/ex1_1.out
/petsc/src/tao/unconstrained/impls/lmvm/tests/output/ex1_2.out
/petsc/src/tao/unconstrained/impls/neldermead/neldermead.c
/petsc/src/tao/unconstrained/impls/nls/nls.c
/petsc/src/tao/unconstrained/impls/ntl/ntl.c
/petsc/src/tao/unconstrained/impls/ntr/ntr.c
/petsc/src/tao/unconstrained/impls/owlqn/owlqn.c
/petsc/src/tao/unconstrained/tutorials/burgers_spectral.c
/petsc/src/tao/unconstrained/tutorials/minsurf1.c
/petsc/src/tao/unconstrained/tutorials/output/eptorsion3_1.out
/petsc/src/tao/unconstrained/tutorials/output/minsurf2_1.out
/petsc/src/tao/unconstrained/tutorials/output/minsurf2_2.out
/petsc/src/tao/unconstrained/tutorials/output/minsurf2_2_snes.out
/petsc/src/tao/unconstrained/tutorials/output/minsurf2_3.out
/petsc/src/tao/unconstrained/tutorials/output/minsurf2_3_snes.out
/petsc/src/tao/unconstrained/tutorials/output/minsurf2_4_snes_ngmres_snes_ngmres_select_type-difference.out
/petsc/src/tao/unconstrained/tutorials/output/minsurf2_4_snes_ngmres_snes_ngmres_select_type-linesearch.out
/petsc/src/tao/unconstrained/tutorials/output/minsurf2_5.out
/petsc/src/tao/unconstrained/tutorials/output/rosenbrock4_bfgs_rejects.out
/petsc/src/tao/unconstrained/tutorials/output/rosenbrock4_dbfgs_rejects.out
/petsc/src/tao/unconstrained/tutorials/spectraladjointassimilation.c
/petsc/src/ts/adapt/interface/tsadapt.c
/petsc/src/ts/event/tests/makefile
/petsc/src/ts/event/tsevent.c
/petsc/src/ts/impls/implicit/glle/glle.c
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/ts/interface/sensitivity/tssen.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tseig.c
/petsc/src/ts/tests/ex3.c
/petsc/src/ts/tests/ex30.c
/petsc/src/ts/tests/output/ex21_1_bdf_ngmres_fas_ms.out
/petsc/src/ts/tests/output/ex21_1_bdf_ngmres_fas_ngs.out
/petsc/src/ts/tests/output/ex21_2_bdf_ngmres_fas_ms.out
/petsc/src/ts/tests/output/ex21_2_bdf_ngmres_fas_ngs.out
/petsc/src/ts/tutorials/advection-diffusion-reaction/output/ex5opt_ic_1.out
/petsc/src/ts/tutorials/ex24.c
/petsc/src/ts/tutorials/ex48.c
/petsc/src/ts/tutorials/extchem.c
/petsc/src/ts/tutorials/extchem.example.1
/petsc/src/ts/tutorials/extchemfield.c
/petsc/src/ts/tutorials/gasoline.inp
/petsc/src/ts/tutorials/h2_10sp.inp
/petsc/src/ts/tutorials/meth_ethanol.inp
/petsc/src/ts/tutorials/optimal_control/output/ex1_2.out
/petsc/src/ts/tutorials/optimal_control/output/ex1_3.out
/petsc/src/ts/tutorials/output/ex20opt_ic_1.out
/petsc/src/ts/tutorials/output/ex20opt_ic_2.out
/petsc/src/ts/tutorials/output/ex20opt_ic_3.out
/petsc/src/ts/tutorials/output/ex20opt_p_1.out
/petsc/src/ts/tutorials/output/ex20opt_p_3.out
/petsc/src/ts/utils/dmplexlandau/tutorials/ex1.c
/petsc/src/ts/utils/dmplexlandau/tutorials/ex1f90.F90
/petsc/src/ts/utils/dmplexlandau/tutorials/ex2.c
77e5a1f916-Jun-2024 Barry Smith <bsmith@mcs.anl.gov>

Update SNESSetTolerances() to accept PETSC_DETERMINE an PETSC_DECIDE


changes/dev.rst
manual/snes.rst
/petsc/include/petsc/private/snesimpl.h
/petsc/include/petscsnes.h
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/SNES.pyx
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/petscsnes.pxi
/petsc/src/binding/petsc4py/test/test_snes.py
/petsc/src/snes/impls/composite/snescomposite.c
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/gs/snesgs.c
/petsc/src/snes/impls/ksponly/ksponly.c
/petsc/src/snes/impls/ls/ls.c
/petsc/src/snes/impls/ms/ms.c
/petsc/src/snes/impls/multiblock/multiblock.c
/petsc/src/snes/impls/nasm/nasm.c
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/impls/ngmres/anderson.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/ntrdc/ntrdc.c
/petsc/src/snes/impls/patch/snespatch.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/impls/richardson/snesrichardson.c
/petsc/src/snes/impls/shell/snesshell.c
/petsc/src/snes/impls/tr/tr.c
/petsc/src/snes/impls/vi/rs/virs.c
/petsc/src/snes/impls/vi/ss/viss.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesut.c
/petsc/src/snes/tutorials/ex48.c
/petsc/src/snes/tutorials/ex5.c
/petsc/src/snes/tutorials/ex55k.kokkos.cxx
/petsc/src/snes/tutorials/network/ex1.c
/petsc/src/snes/tutorials/output/ex12_41.out
/petsc/src/snes/tutorials/output/ex12_42.out
/petsc/src/snes/tutorials/output/ex12_42_alt.out
/petsc/src/snes/tutorials/output/ex12_43.out
/petsc/src/snes/tutorials/output/ex12_44.out
/petsc/src/snes/tutorials/output/ex12_44_alt.out
/petsc/src/snes/tutorials/output/ex12_fas_newton_0.out
/petsc/src/snes/tutorials/output/ex12_fas_newton_0_p4est.out
/petsc/src/snes/tutorials/output/ex12_fas_newton_1.out
/petsc/src/snes/tutorials/output/ex12_fas_newton_coarse_0.out
/petsc/src/snes/tutorials/output/ex12_fas_ngs_0.out
/petsc/src/snes/tutorials/output/ex12_p4est_exact_q2_conformal_parallel.out
/petsc/src/snes/tutorials/output/ex12_p4est_exact_q2_conformal_parallel_parmetis.out
/petsc/src/snes/tutorials/output/ex12_p4est_exact_q2_conformal_serial.out
/petsc/src/snes/tutorials/output/ex12_p4est_exact_q2_nonconformal_parallel.out
/petsc/src/snes/tutorials/output/ex12_p4est_exact_q2_nonconformal_parallel_parmetis.out
/petsc/src/snes/tutorials/output/ex12_p4est_exact_q2_nonconformal_serial.out
/petsc/src/snes/tutorials/output/ex12_p4est_fas_q2_conformal_serial.out
/petsc/src/snes/tutorials/output/ex12_p4est_full_q2_conformal_serial.out
/petsc/src/snes/tutorials/output/ex12_p4est_full_q2_conformal_serial_plex.out
/petsc/src/snes/tutorials/output/ex12_p4est_full_q2_nonconformal_parallel.out
/petsc/src/snes/tutorials/output/ex12_p4est_full_q2_nonconformal_parallel_bddcfas.out
/petsc/src/snes/tutorials/output/ex12_p4est_full_q2_nonconformal_parallel_bddcfas_alt.out
/petsc/src/snes/tutorials/output/ex12_p4est_full_q2_nonconformal_serial.out
/petsc/src/snes/tutorials/output/ex12_p4est_solve_fas.out
b3480c8115-Jun-2024 Barry Smith <bsmith@mcs.anl.gov>

Deprecate the use of PETSC_DEFAULT with PETSC_CURRENT for KSPSetTolerances() since PETSC_DEFAULT is a confusing (and wrong) term in current usage.

Add support to KSPSetTolerances() to accept PETSC_D

Deprecate the use of PETSC_DEFAULT with PETSC_CURRENT for KSPSetTolerances() since PETSC_DEFAULT is a confusing (and wrong) term in current usage.

Add support to KSPSetTolerances() to accept PETSC_DETERMINE to reset the value back to the default when the object was created

show more ...


changes/dev.rst
manual/ksp.rst
/petsc/include/petsc/private/kspimpl.h
/petsc/include/petscsys.h
/petsc/lib/petsc/bin/maint/petsclinter/petsclinter/classes/docs/_doc_section.py
/petsc/lib/petsc/bin/maint/petsclinter/petsclinter/classes/docs/_doc_section_base.py
/petsc/lib/petsc/bin/maint/petsclinter/petsclinter/main.py
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/Const.pyx
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/KSP.pyx
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/petscdef.pxi
/petsc/src/ksp/ksp/impls/cheby/cheby.c
/petsc/src/ksp/ksp/impls/fetidp/fetidp.c
/petsc/src/ksp/ksp/impls/gmres/agmres/agmres.c
/petsc/src/ksp/ksp/impls/tsirm/tsirm.c
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/ksp/ksp/interface/iterativ.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/tests/ex13.c
/petsc/src/ksp/ksp/tests/ex24.c
/petsc/src/ksp/ksp/tests/ex38.c
/petsc/src/ksp/ksp/tests/ex39.c
/petsc/src/ksp/ksp/tests/ex40.c
/petsc/src/ksp/ksp/tests/ex43.c
/petsc/src/ksp/ksp/tests/ex48.c
/petsc/src/ksp/ksp/tests/ex58.c
/petsc/src/ksp/ksp/tests/ex62f.F90
/petsc/src/ksp/ksp/tests/ex7.c
/petsc/src/ksp/ksp/tests/ex8.c
/petsc/src/ksp/ksp/tests/ex82.c
/petsc/src/ksp/ksp/tests/ex85.c
/petsc/src/ksp/ksp/tutorials/ex1.c
/petsc/src/ksp/ksp/tutorials/ex15.c
/petsc/src/ksp/ksp/tutorials/output/ex2_help.out
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/transpose/htransm.c
/petsc/src/mat/impls/transpose/transm.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/tests/ex1.c
/petsc/src/sys/f90-mod/petscsys.h
/petsc/src/sys/objects/options.c
/petsc/src/sys/utils/psplit.c
07f25ad118-Jul-2024 Satish Balay <balay@mcs.anl.gov>

Merge remote-tracking branch 'origin/release'


/petsc/config/BuildSystem/config/packages/MUMPS.py
/petsc/config/BuildSystem/config/packages/hwloc.py
/petsc/config/BuildSystem/config/packages/mmg.py
build_man_impls_links.py
build_manpages_c2html.py
conf.py
developers/documentation.rst
ext/html5_petsc.py
makefile
/petsc/include/petscblaslapack.h
/petsc/lib/petsc/bin/maint/builddist
/petsc/lib/petsc/bin/maint/xclude
/petsc/src/binding/petsc4py/docs/source/conf.py
/petsc/src/binding/petsc4py/makefile
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/Vec.pyx
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/impls/gmres/fgmres/fgmres.c
/petsc/src/ksp/ksp/impls/gmres/gmres.c
/petsc/src/ksp/ksp/impls/gmres/lgmres/lgmres.c
/petsc/src/ksp/ksp/impls/gmres/pgmres/pgmres.c
/petsc/src/ksp/ksp/impls/gmres/pipefgmres/pipefgmres.c
/petsc/src/mat/impls/sell/mpi/mpisell.c
/petsc/src/mat/impls/sell/seq/sell.c
/petsc/src/mat/impls/transpose/htransm.c
/petsc/src/mat/impls/transpose/transm.c
e2b8d0fc21-Dec-2023 Matthew G. Knepley <knepley@gmail.com>

Plex: Made DMPlexCreateCellNumbering() public


changes/dev.rst
/petsc/include/petsc/private/dmpleximpl.h
/petsc/include/petscdmplex.h
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexglvis.c
/petsc/src/dm/impls/plex/plexpartition.c
/petsc/src/dm/impls/plex/tests/ex47.c
/petsc/src/dm/impls/plex/tests/output/ex47_0.out
/petsc/src/dm/impls/plex/tests/output/ex47_1.out
/petsc/src/dm/impls/plex/tests/output/ex47_2.out
e03fd34015-Jul-2024 Matthew G. Knepley <knepley@gmail.com>

DMAdaptor: Fix multiple adaptations - Fix prefixes - Add DMAdaptorSetOptionsPrefix()


changes/dev.rst
/petsc/include/petscdmadaptor.h
/petsc/src/snes/interface/snes.c
/petsc/src/snes/utils/dm/dmadapt.c
ad00654a15-Jul-2024 Satish Balay <balay@mcs.anl.gov>

Merge branch 'nathawani/feature-amr-using-flux-norm' into 'main'

SNES ex27: Poisson problem using primal and mixed form for error estimator using flux norm

See merge request petsc/petsc!7674


/petsc/config/BuildSystem/config/packages/bamg.py
changes/dev.rst
/petsc/include/petsc/private/dmadaptorimpl.h
/petsc/include/petscdmadaptor.h
/petsc/include/petscdmadaptortypes.h
/petsc/include/petscdmlabel.h
/petsc/include/petscdmplex.h
/petsc/include/petscdmtypes.h
/petsc/include/petscksp.h
/petsc/include/petscsnes.h
/petsc/include/petscsnestypes.h
/petsc/include/petscsys.h
/petsc/include/petscvec.h
/petsc/lib/petsc/bin/maint/petsclinter/petsclinter/checks/_register.py
/petsc/src/dm/impls/plex/plexfem.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmgenerate.c
/petsc/src/ksp/ksp/impls/cheby/cheby.c
/petsc/src/ksp/ksp/interface/ftn-custom/zitfuncf.c
/petsc/src/ksp/ksp/utils/schurm/schurm.c
/petsc/src/ksp/pc/impls/asm/asm.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/graphops/coarsen/impls/misk/misk.c
/petsc/src/mat/graphops/coarsen/interface/coarsen.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/sell/mpi/mpisell.c
/petsc/src/mat/interface/matproduct.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/tests/ex176.c
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/interface/dlregissnes.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/linesearch/impls/bt/linesearchbt.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/snes/tutorials/ex12.c
/petsc/src/snes/tutorials/ex27.c
/petsc/src/snes/tutorials/output/ex12_tri_p1_adapt_analytic_mmg.out
/petsc/src/snes/tutorials/output/ex12_tri_p1_adapt_analytic_pragmatic.out
/petsc/src/snes/tutorials/output/ex12_tri_p2_adapt_analytic_mmg.out
/petsc/src/snes/tutorials/output/ex12_tri_p2_adapt_analytic_pragmatic.out
/petsc/src/snes/tutorials/output/ex27_2d_p2_rt0p0_byhand_quadratic.out
/petsc/src/snes/tutorials/output/ex27_2d_p2_rt0p0_byhand_sensor.out
/petsc/src/snes/tutorials/output/ex27_2d_p2_rt0p0_byhand_trig.out
/petsc/src/snes/tutorials/output/ex27_2d_p2_rt0p0_quadratic.out
/petsc/src/snes/tutorials/output/ex27_2d_p2_rt0p0_sensor.out
/petsc/src/snes/tutorials/output/ex27_2d_p2_rt0p0_trig.out
/petsc/src/snes/utils/dm/dmadapt.c
/petsc/src/sys/fileio/fdir.c
/petsc/src/sys/objects/ftn-custom/zoptionsf.c
/petsc/src/sys/objects/options.c
/petsc/src/sys/utils/sortip.c
/petsc/src/tao/interface/taosolver.c
/petsc/src/tao/shell/taoshell.c
/petsc/src/ts/tests/ex2.c
/petsc/src/ts/tests/ex4.c
/petsc/src/vec/is/is/interface/index.c
/petsc/src/vec/vec/utils/tagger/impls/simple.c
8b724c9113-Jul-2024 Matthew G. Knepley <knepley@gmail.com>

DMAdaptor: Add monitoring
- Add DMAdaptorMonitor(), DMAdaptorMonitorSet(), DMAdaptorMonitorCancel(), DMAdaptorMonitorSetFromOptions()
- Add DMAdaptorMonitorError(), DMAdaptorMonitorErrorDraw(), DMA

DMAdaptor: Add monitoring
- Add DMAdaptorMonitor(), DMAdaptorMonitorSet(), DMAdaptorMonitorCancel(), DMAdaptorMonitorSetFromOptions()
- Add DMAdaptorMonitorError(), DMAdaptorMonitorErrorDraw(), DMAdaptorMonitorErrorDrawLGCreate(), DMAdaptorMonitorErrorDrawLG()
- Add DMAdaptorMonitorRegister(), DMAdaptorMonitorRegisterAll(), DMAdaptorMonitorRegisterDestroy()

show more ...


changes/dev.rst
/petsc/include/petsc/private/dmadaptorimpl.h
/petsc/include/petscdmadaptor.h
/petsc/include/petscdmtypes.h
/petsc/src/snes/interface/dlregissnes.c
/petsc/src/snes/utils/dm/dmadapt.c
3a336bb108-Jul-2024 Matthew G. Knepley <knepley@gmail.com>

DMAdaptor: Complete overhaul
- Add CLASSID and type registration
- Add error estimates based upon a mixed problem
- Add DMAdaptorSetType(), DMAdaptorGetType(), DMAdaptorRegister(), DMAdaptorRegisterA

DMAdaptor: Complete overhaul
- Add CLASSID and type registration
- Add error estimates based upon a mixed problem
- Add DMAdaptorSetType(), DMAdaptorGetType(), DMAdaptorRegister(), DMAdaptorRegisterAll(), DMAdaptorRegisterDestroy()
- Add DMAdaptorGetMixedSetupFunction() and DMAdaptorSetMixedSetupFunction()

show more ...


changes/dev.rst
/petsc/include/petsc/private/dmadaptorimpl.h
/petsc/include/petscdmadaptor.h
/petsc/include/petscdmadaptortypes.h
/petsc/lib/petsc/bin/maint/petsclinter/petsclinter/checks/_register.py
/petsc/src/dm/interface/dmgenerate.c
/petsc/src/snes/interface/dlregissnes.c
/petsc/src/snes/utils/dm/dmadapt.c
2353bfff08-Jul-2024 Matthew G. Knepley <knepley@gmail.com>

Plex: Add DMPlexComputeL2FluxDiffVec() and DMPlexComputeL2FluxDiffVecLocal()


/petsc/config/BuildSystem/config/packages/bamg.py
changes/dev.rst
/petsc/include/petsc/private/cupmatomics.hpp
/petsc/include/petscdmplex.h
/petsc/include/petscsnes.h
/petsc/include/petscsnestypes.h
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/Mat.pyx
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/petscmat.pxi
/petsc/src/binding/petsc4py/test/test_mat_schur.py
/petsc/src/dm/impls/plex/plexfem.c
/petsc/src/dm/impls/plex/transform/interface/plextransform.c
/petsc/src/mat/impls/sell/seq/seqhip/sellhip.hip.cpp
/petsc/src/snes/interface/snes.c
/petsc/src/sys/objects/kokkos/kinit.kokkos.cxx
/petsc/src/ts/tests/output/ex30_0.out
/petsc/src/ts/tests/output/ex30_3d.out
/petsc/src/ts/tests/output/ex30_cgns.out
/petsc/src/ts/tests/output/ex30_normal.out
/petsc/src/ts/tests/output/ex30_simple.out
/petsc/src/ts/utils/dmplexlandau/kokkos/landau.kokkos.cxx
/petsc/src/ts/utils/dmplexlandau/plexland.c
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex1_0.out
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex1_re.out
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex1_sphere.out
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex1f90_0.out
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex2_0.out
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex2_simplex.out
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex2_single.out
/petsc/src/vec/vec/utils/tagger/impls/simple.c
c6267af912-Jul-2024 Barry Smith <bsmith@mcs.anl.gov>

rename classic_docs to something more indicative of what they are making code maintainance of doc building easier


build_manpages_c2html.py
conf.py
developers/documentation.rst
ext/html5_petsc.py
/petsc/lib/petsc/bin/maint/builddist
/petsc/lib/petsc/bin/maint/xclude
813bf17812-Jul-2024 Barry Smith <bsmith@mcs.anl.gov>

Fix yet another Python raw string in the doc generation


build_man_impls_links.py
2c804a5512-Jul-2024 Barry Smith <bsmith@mcs.anl.gov>

Fix double printing of parts of the footer for website pages.

Reported-by: Nils Friess


conf.py
makefile
/petsc/include/petscdmlabel.h
/petsc/include/petscksp.h
/petsc/include/petscsys.h
/petsc/include/petscvec.h
/petsc/src/binding/petsc4py/docs/source/conf.py
/petsc/src/binding/petsc4py/makefile
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/interface/dm.c
/petsc/src/ksp/ksp/impls/cheby/cheby.c
/petsc/src/ksp/ksp/interface/ftn-custom/zitfuncf.c
/petsc/src/ksp/ksp/utils/schurm/schurm.c
/petsc/src/ksp/pc/impls/asm/asm.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/graphops/coarsen/coarsen.c
/petsc/src/mat/graphops/coarsen/impls/misk/misk.c
/petsc/src/mat/impls/sell/mpi/mpisell.c
/petsc/src/mat/interface/matproduct.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/tests/ex176.c
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/linesearch/impls/bt/linesearchbt.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/sys/fileio/fdir.c
/petsc/src/sys/objects/ftn-custom/zoptionsf.c
/petsc/src/sys/objects/options.c
/petsc/src/tao/interface/taosolver.c
/petsc/src/tao/shell/taoshell.c
/petsc/src/ts/tests/ex2.c
/petsc/src/ts/tests/ex4.c
/petsc/src/vec/is/is/interface/index.c
/petsc/src/vec/is/utils/pmap.c
03b7249313-Jul-2024 Satish Balay <balay@mcs.anl.gov>

Merge branch 'jolivet/feature-fieldsplit-reuse-solve' into 'main'

PCFIELDSPLIT: reuse computation of Schur complement in PCApply()

Closes #1554

See merge request petsc/petsc!7684


changes/dev.rst
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/Mat.pyx
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/petscmat.pxi
/petsc/src/binding/petsc4py/test/test_mat_schur.py
/petsc/src/ksp/ksp/utils/schurm/schurm.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
87510d7d11-Jul-2024 Matthew G. Knepley <knepley@gmail.com>

PetscDS: Add cell volume to constants and set during integration - Add PetscDSSetCellParameters()


changes/dev.rst
/petsc/include/petsc/private/cupmatomics.hpp
/petsc/include/petsc/private/petscdsimpl.h
/petsc/include/petscds.h
/petsc/src/dm/dt/fe/impls/basic/febasic.c
/petsc/src/dm/dt/interface/dtds.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/transform/interface/plextransform.c
/petsc/src/mat/impls/sell/seq/seqhip/sellhip.hip.cpp
/petsc/src/sys/objects/kokkos/kinit.kokkos.cxx
/petsc/src/ts/tests/output/ex30_0.out
/petsc/src/ts/tests/output/ex30_3d.out
/petsc/src/ts/tests/output/ex30_cgns.out
/petsc/src/ts/tests/output/ex30_normal.out
/petsc/src/ts/tests/output/ex30_simple.out
/petsc/src/ts/utils/dmplexlandau/kokkos/landau.kokkos.cxx
/petsc/src/ts/utils/dmplexlandau/plexland.c
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex1_0.out
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex1_re.out
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex1_sphere.out
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex1f90_0.out
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex2_0.out
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex2_simplex.out
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex2_single.out
d9eadc8523-Jun-2024 Pierre Jolivet <pierre@joliv.et>

PCFIELDSPLIT: reuse computation of Schur complement in PCApply()


changes/dev.rst
/petsc/include/petsc/private/cupmatomics.hpp
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/Mat.pyx
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/petscmat.pxi
/petsc/src/binding/petsc4py/test/test_mat_schur.py
/petsc/src/dm/impls/plex/transform/interface/plextransform.c
/petsc/src/ksp/ksp/utils/schurm/schurm.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/mat/impls/sell/seq/seqhip/sellhip.hip.cpp
/petsc/src/sys/objects/kokkos/kinit.kokkos.cxx
/petsc/src/ts/tests/output/ex30_0.out
/petsc/src/ts/tests/output/ex30_3d.out
/petsc/src/ts/tests/output/ex30_cgns.out
/petsc/src/ts/tests/output/ex30_normal.out
/petsc/src/ts/tests/output/ex30_simple.out
/petsc/src/ts/utils/dmplexlandau/kokkos/landau.kokkos.cxx
/petsc/src/ts/utils/dmplexlandau/plexland.c
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex1_0.out
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex1_re.out
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex1_sphere.out
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex1f90_0.out
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex2_0.out
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex2_simplex.out
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex2_single.out
7c485f3809-Jul-2024 Satish Balay <balay@mcs.anl.gov>

Merge remote-tracking branch 'origin/release'


/petsc/.gitlab-ci.yml
build_c2html.py
build_c2html_file.py
build_man_impls_links.py
build_man_index.py
build_man_pages.py
conf.py
ext/html5_petsc.py
requirements.txt
/petsc/src/binding/petsc4py/docs/source/install.rst
/petsc/src/binding/petsc4py/makefile
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/Vec.pyx
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/petscvec.pxi
/petsc/src/binding/petsc4py/test/test_vec.py
/petsc/src/dm/impls/plex/plex.c
/petsc/src/sys/logging/handler/impls/default/logdefault.c
/petsc/src/vec/is/utils/pmap.c
34c645fd08-Jul-2024 Barry Smith <bsmith@mcs.anl.gov>

Update sphinx packages used to build docs make petsc4py docs shared common requirements.txt

This prevents errors such as below when building docs

Running Sphinx v7.3.7
Using PETSC inventory from fi

Update sphinx packages used to build docs make petsc4py docs shared common requirements.txt

This prevents errors such as below when building docs

Running Sphinx v7.3.7
Using PETSC inventory from file:///Users/barrysmith/Src/petsc/doc/_build/html/objects.inv
<Inventory (url): PETSc v3.21, 7842 objects>

Exception occurred:
File "petsc4py/PETSc.pyx", line 1, in init petsc4py.PETSc
ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject

show more ...


/petsc/.gitlab-ci.yml
build_c2html.py
build_c2html_file.py
build_man_impls_links.py
build_man_index.py
build_man_pages.py
conf.py
ext/html5_petsc.py
requirements.txt
/petsc/src/binding/petsc4py/docs/source/install.rst
/petsc/src/binding/petsc4py/makefile
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/DMDA.pyx
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/Vec.pyx
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/petscdmda.pxi
/petsc/src/binding/petsc4py/src/petsc4py/PETSc/petscvec.pxi
/petsc/src/binding/petsc4py/test/test_dmda.py
/petsc/src/binding/petsc4py/test/test_vec.py
/petsc/src/ksp/ksp/tutorials/ex55.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/snes/impls/tr/tr.c
/petsc/src/sys/logging/handler/impls/default/logdefault.c
/petsc/src/ts/impls/explicit/rk/rk.c
/petsc/src/ts/tutorials/advection-diffusion-reaction/ex5adj.c
648c30bc08-Jul-2024 Barry Smith <bsmith@mcs.anl.gov>

The use case of PetscOptionsGetViewer() has evolved to no longer be the get/restore model

Hence the code needs to be refactored

Introduce PetscCallNull() and PetscCallMPINull() to simplify PETSC_VI

The use case of PetscOptionsGetViewer() has evolved to no longer be the get/restore model

Hence the code needs to be refactored

Introduce PetscCallNull() and PetscCallMPINull() to simplify PETSC_VIEWER_XXXX_() routines

Reported-by: James Wright
Thanks-to: Jeremy L Thompson

show more ...


/petsc/config/BuildSystem/config/packages/slepc.py
/petsc/config/PETSc/Configure.py
/petsc/config/query_tests.py
changes/dev.rst
manual/other.rst
/petsc/gmakefile.test
/petsc/include/petsc/private/petscimpl.h
/petsc/include/petsc/private/viewerimpl.h
/petsc/include/petscerror.h
/petsc/include/petscviewer.h
/petsc/lib/petsc/conf/rules_util.mk
/petsc/src/dm/dt/interface/dtprob.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexexodusii.c
/petsc/src/dm/impls/plex/plexpartition.c
/petsc/src/dm/impls/plex/tests/ex18.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/partitioner/interface/partitioner.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/impls/minres/minres.c
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/tutorials/output/ex2_help.out
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/mpi/pcmpi.c
/petsc/src/ksp/pc/impls/patch/pcpatch.c
/petsc/src/ksp/pc/impls/svd/svd.c
/petsc/src/mat/graphops/color/interface/matcoloring.c
/petsc/src/mat/matfd/fdmatrix.c
/petsc/src/mat/tests/ex84.c
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/snes/tests/ex15.c
/petsc/src/snes/tutorials/ex17.c
/petsc/src/snes/tutorials/ex36.c
/petsc/src/snes/tutorials/ex56.c
/petsc/src/snes/tutorials/ex62.c
/petsc/src/sys/classes/bag/bag.c
/petsc/src/sys/classes/viewer/impls/ams/ams.c
/petsc/src/sys/classes/viewer/impls/ascii/filev.c
/petsc/src/sys/classes/viewer/impls/ascii/vcreatea.c
/petsc/src/sys/classes/viewer/impls/binary/binv.c
/petsc/src/sys/classes/viewer/impls/draw/drawv.c
/petsc/src/sys/classes/viewer/impls/glvis/glvis.c
/petsc/src/sys/classes/viewer/impls/matlab/vmatlab.c
/petsc/src/sys/classes/viewer/impls/socket/send.c
/petsc/src/sys/classes/viewer/interface/view.c
/petsc/src/sys/classes/viewer/interface/viewreg.c
/petsc/src/sys/classes/viewer/tests/ex4.c
/petsc/src/sys/classes/viewer/tests/ex5.c
/petsc/src/sys/classes/viewer/tests/ex7.c
/petsc/src/sys/classes/viewer/tutorials/ex2.c
/petsc/src/sys/logging/plog.c
/petsc/src/sys/objects/aoptions.c
/petsc/src/sys/objects/destroy.c
/petsc/src/sys/objects/inherit.c
/petsc/src/sys/objects/init.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/objects/tagm.c
/petsc/src/sys/tests/ex50.c
/petsc/src/sys/tests/ex52.c
/petsc/src/sys/tests/ex70.c
/petsc/src/sys/tests/options/ex55.c
/petsc/src/sys/tests/output/ex70_1.out
/petsc/src/ts/interface/sensitivity/tssen.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tsmon.c
/petsc/src/ts/tutorials/ex53.c
/petsc/src/ts/tutorials/hamiltonian/ex2.c
/petsc/src/vec/is/is/tests/ex9.c
/petsc/src/vec/is/is/utils/iscoloring.c
/petsc/src/vec/is/sf/tests/ex18.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/tagger/tutorials/ex1.c

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