Updated to use the configTas.py

Graphs now print correctly.

implemented two new classes, File and Field, Field is a child of File. These are now used to store the data after proccessing.

Also added functionality to graphing, so graphing multi-field proble

implemented two new classes, File and Field, Field is a child of File. These are now used to store the data after proccessing.

Also added functionality to graphing, so graphing multi-field problems
works.

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Almost finished with multi-field support. all data is now read in and analyized. Just have to change the workflow for graphing.

Changes to be committed:
modified: petsc_tas_analysis.py
Changed graphing highest flop rate per time for a level to
total flop rate
Still working on stat package

python: replace commands with subprocess

generateetags.py: switch from commands to subprocess; unicode fix

python: don't import commands when it isn't used

generatefortranstubs.py: use subprocess (for Python-3)

Changes to be committed:
modified: petsc_tas_analysis.py
Added command line args to control out putting graphs.
Added command line args to control out putting variance.
Added function to calcul

Changes to be committed:
modified: petsc_tas_analysis.py
Added command line args to control out putting graphs.
Added command line args to control out putting variance.
Added function to calculate Flop and time variance between PE's

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bugReport.py: remove unmaintained utility

Sending email via SMTP.sendmail will rarely work on client computers.

python: use sort(key=) instead of sort with cmp function

For Python-3, but also cleaner.

python: convert leading tabs to spaces

config: remove "import user"; deprecated in Python 2.6 and removed in 3

I can't imagine why anyone would want this unpredictable behavior in a
configuration system in the first place.

Changes to be committed:
modified: petsc_tas_analysis.py
Changed code to work with dof as an array rather than a single
field. Also fixed legend on static scaling graph

Changes to be committed:
modified: petsc_tas_analysis.py
the style sheet will now load from
$PETSC_DIR/share/petsc/xml/petsc_tas_style.mplstyle

Changes to be committed:
modified: ../../petsc_tas_analysis.py
added the command line control of dim.

Changes to be committed:
modified: petsc_tas_analysis.py
added command line argument to control printing the
flop rate graph for static scaling. Current default is
0 for do not print it.

release: set v3.10 strings

Merge branch 'master' into arcowie-rem/feature-error-logging

* master: (345 commits)
Update dev notes for the coming release
Increase patchlevel to 3.9.4
doc fixes
Added some AIJSELL tests t

Merge branch 'master' into arcowie-rem/feature-error-logging

* master: (345 commits)
Update dev notes for the coming release
Increase patchlevel to 3.9.4
doc fixes
Added some AIJSELL tests that mirror the SELL tests.
Bib: More refs
Removed use of hardwired -1 to represent PETSC_NULL_XXX object, since the null value is now 0.
fix memleaks flagged by valgrind
ex62: disable long running test and workaround differences in iteration counts on various builds.
Add FAQ we can point to when users get error messages such as: "PETSc was configured with one OpenMPI mpi.h version but now appears to be compiling using a different OpenMPI mpi.h version"
swith test from mpich to openmpi as mpich ch3:sock is unuserable per PetscShmCommGet()
DM: Forgot to move include statement
fix nightlybuild issues - disable hypre [for openmp] and fix uninitialized variables
tests: enable openmp and hwloc with one of the mumps tests
Default BoomerAMG smoothers
Configure: Revert changes from debb90c, so that we are back to the original Libmesh
Configure: Reverted change for Libmesh from 83cd5d7
Split vecimpl.h into vecimpl.h and vecscatterimpl.h
SNES ex62: Turned off some tests for other precisions and shortened output of sensitive tests
Use mmap to allocate the shared pthread barrier if available
Add configure test for functional mmap
...

Conflicts:
include/petscconvest.h
src/snes/examples/tutorials/ex13.c
src/snes/interface/snes.c
src/snes/utils/convest.c

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tests: run 'cleantest' after builds - to cleanup disk usage by tests

Changes to be committed:
modified: petsc_tas_analysis.py
Made changes to support dofs as an array

Changes to be committed:
modified: petsc_tas_analysis.py
Minor fixes

Changes to be committed:
modified: lib/petsc/bin/petsc_tas_analysis.py

jenkins: run 'cleantest' before 'allgtest-tap' - an attempt to fix errors of type:

/usr/bin/rm: cannot remove ‘./arch-jenkins-linux-gcc-quad-64idx-dbg/tests/counts’: Directory not empty