FV: Move to its own directory
Merge from doc-fixes branch
Fixes for doctext update
Add PetscArraycmp(), PetscArraycpy(), PetscArrayzero(), PetscArraymove(), update code to use new formsReplace a couple multi-mallocs with a single mallocReplace backwards loops in MatSetValues_*()
Add PetscArraycmp(), PetscArraycpy(), PetscArrayzero(), PetscArraymove(), update code to use new formsReplace a couple multi-mallocs with a single mallocReplace backwards loops in MatSetValues_*() with PetscArraymove()Commit-type: style-fix, feature
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Merged in barry/update-collective-on (pull request #1744)Update the use of Collective on in the manual pages to reflect the new style
Merged in knepley/fix-subdm-multiple-ds (pull request #1701)Knepley/fix subdm multiple ds
Update the use of Collective on in the manual pages to reflect the new styleCommit-type: style-fix, documentationThanks-to: Patrick Sanan <patrick.sanan@gmail.com>
Man pages: remove .keywords: fieldsThis field is recognized by doctext from Sowing (http://wgropp.cs.illinois.edu/projects/software/sowing/doctext/node20.htm#Node20),but it doesn't seem to be unif
Man pages: remove .keywords: fieldsThis field is recognized by doctext from Sowing (http://wgropp.cs.illinois.edu/projects/software/sowing/doctext/node20.htm#Node20),but it doesn't seem to be uniformly used or maintained.Thus, remove all .keywords: fields, and a following blank line, if present.This is accomplished with GNU sed (gsed on OS X), with the following commands.*Warning* that this type of command can corrupt a .git directory,so be cautious in reusing or modifying these commands. They first lookfor and delete matching lines with a following line consisting of only whitespace,and then delete any remaining matching lines. find src/ -type f -exec gsed -i '/keywords:/ {N; /\n\s*$/d}' {} + find src/ -type f -exec gsed -i '/keywords:/d' {} + find include/ -type f -exec gsed -i '/keywords:/ {N; /\n\s*$/d}' {} + find include/ -type f -exec gsed -i '/keywords:/d' {} +Hints on the sed command obtained from: https://unix.stackexchange.com/questions/100754/how-to-delete-a-specific-line-and-the-following-blank-line-using-gnu-sed
PetscDS: Ignore fields outside the range of this DS when selecting
Merged in barry/check-bad-urls (pull request #1685)Barry/check bad urlsApproved-by: Patrick Sanan <patrick.sanan@gmail.com>Approved-by: Junchao Zhang <junchao.zhang@gmail.com>
Fixed out-dated URLS using make checkbadURLS REPLACE=1One manual fix of https://en.wikipedia.org/wiki/Buckingham_π_theorem since the automatic tool dropped the first _ for some reasonManual fix of
Fixed out-dated URLS using make checkbadURLS REPLACE=1One manual fix of https://en.wikipedia.org/wiki/Buckingham_π_theorem since the automatic tool dropped the first _ for some reasonManual fix of //faq.html since the automatic tool incorrectly replaced /faq.html to //faq.html in some locationsThese are largely updates of http to https but have a variety of other website location changesOnce this branch is in master individual developers can run make checkbadURLS and fix URLs related to their projects manuallyCommit-type: bug-fix, documentation
Plex: Implemented pullback/pushforward - Added k to PetscDualSpace. It indicates what kind of transformation we use. - DualSpace does pullback and FE integration routines do pushforward - All integra
Plex: Implemented pullback/pushforward - Added k to PetscDualSpace. It indicates what kind of transformation we use. - DualSpace does pullback and FE integration routines do pushforward - All integration now takes a PetscFEGeom argument and pushes forward correctly - Added PetscDualSpaceTransformType - Removed TransformF() because we now transform the basis function instead - Chaged workspace management in DS - Updated L2 diff functions - Updated interpolation functions - Added way to output exact solution in DMSNESCheck()
DT: Make PetscQuadratureView() easier to read
Merged in hmorgan/fix-GLL-quadrature-fix-pr1451 (pull request #1536)hmorgan/fix-GLL-quadrature-fix-pr1451Approved-by: BarryFSmith <bsmith@mcs.anl.gov>
Fixing variable name
Merged in knepley/feature-poiseuille-example (pull request #1446)Knepley/feature poiseuille exampleApproved-by: BarryFSmith <bsmith@mcs.anl.gov>
Removing redundant function
Capitalize Enum types
Fixes for Barry's review in pr1451 and others
Revert "Revert "Merge branch 'pr1451/hmorgan/fix-GLL-quadrature/master' [PR #1451]""This reverts commit f8f0706ac36152a85c2163c77236a76f30185f56.
Doc: Fixed comment
Revert "Merge branch 'pr1451/hmorgan/fix-GLL-quadrature/master' [PR #1451]"This reverts commit 4d195b5eb92504439ee3a75f081f195aff73b70e, reversingchanges made to 57cf99f718c63d6d4dd898d489c9b5204d
Revert "Merge branch 'pr1451/hmorgan/fix-GLL-quadrature/master' [PR #1451]"This reverts commit 4d195b5eb92504439ee3a75f081f195aff73b70e, reversingchanges made to 57cf99f718c63d6d4dd898d489c9b5204d7f7338.Accidentally merged to `master` instead of `next`.If tests turn out okay, this revert will be reverted.
adding PetscGaussLobattoLegendre function to dt, removing GLL, updating examples
DM+DS: Exact solution functions should also carry contexts
DM+DS: Move adjacency from DS to DM- Added DMGet/SetAdjacency()- Altered DMView when fields are set- Copy default adj on Clone, and field adj on CopyFields
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