History log of /petsc/src/dm/impls/da/ (Results 876 – 900 of 1198)
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0a696f6614-Jan-2013 Peter Brune <brune@mcs.anl.gov>

Added previously untested DMCreateDomainDecompositionDM() implementation for DA and associated logic.

Hg-commit: 6c47148058cd0fb9dc706ad095a0f72274e04b38


/petsc/bin/maint/confignightly/thrash
/petsc/config/builder.py
/petsc/config/examples/arch-linux-pkgs-opt-threadcomm.py
/petsc/config/examples/arch-linux-pkgs-threadcomm.py
/petsc/include/finclude/petscts.h
/petsc/include/finclude/petsctsdef.h
/petsc/include/petsc-private/daimpl.h
/petsc/include/petsc-private/fortranimpl.h
/petsc/include/petsc-private/linesearchimpl.h
/petsc/include/petsc-private/patchimpl.h
/petsc/include/petsc-private/petscimpl.h
/petsc/include/petsc-private/threadcommimpl.h
/petsc/include/petsc-private/tsimpl.h
/petsc/include/petsccharacteristic.h
/petsc/include/petscdm.h
/petsc/include/petscdmda.h
/petsc/include/petscdmmesh.h
/petsc/include/petscdmpatch.h
/petsc/include/petscdraw.h
/petsc/include/petscerror.h
/petsc/include/petscis.h
/petsc/include/petscksp.h
/petsc/include/petscmat.h
/petsc/include/petscmath.h
/petsc/include/petscoptions.h
/petsc/include/petscpc.h
/petsc/include/petscsf.h
/petsc/include/petscsnes.h
/petsc/include/petscsys.h
/petsc/include/petsctime.h
/petsc/include/petscts.h
/petsc/include/petscvec.h
/petsc/include/petscviewer.h
/petsc/makefile
dacreate.c
dadd.c
/petsc/src/dm/impls/patch/examples/tests/ex1.c
/petsc/src/dm/impls/patch/examples/tests/output/ex1_0.out
/petsc/src/dm/impls/patch/examples/tests/output/ex1_1.out
/petsc/src/dm/impls/patch/examples/tests/output/ex1_2.out
/petsc/src/dm/impls/patch/examples/tests/output/ex1_3.out
/petsc/src/dm/impls/patch/examples/tests/output/ex1_4.out
/petsc/src/dm/impls/patch/patch.c
/petsc/src/dm/impls/patch/patchcreate.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/doxygen/Doxyfile
/petsc/src/docs/doxygen/Doxyfile_old
/petsc/src/docs/doxygen/commentfilter.sh
/petsc/src/docs/doxygen/convert-examples.sh
/petsc/src/docs/doxygen/dm-commentfilter.sh
/petsc/src/docs/doxygen/ex1.h
/petsc/src/docs/doxygen/example-filter.sh
/petsc/src/docs/doxygen/examples/ex1.c
/petsc/src/docs/doxygen/img/danumbering.png
/petsc/src/docs/doxygen/img/ghost.pdf
/petsc/src/docs/doxygen/img/ghost.png
/petsc/src/docs/doxygen/img/petscwww.png
/petsc/src/docs/doxygen/img/zoom.png
/petsc/src/docs/doxygen/is-commentfilter.sh
/petsc/src/docs/doxygen/ksp-commentfilter.sh
/petsc/src/docs/doxygen/manual/dev/basic-object-design.h
/petsc/src/docs/doxygen/manual/dev/main.h
/petsc/src/docs/doxygen/manual/dev/matrix-classes.h
/petsc/src/docs/doxygen/manual/dev/minimal-class-standards.h
/petsc/src/docs/doxygen/manual/dev/petsc-kernel.h
/petsc/src/docs/doxygen/manual/dev/petsc-objects.h
/petsc/src/docs/doxygen/manual/dev/style-guide.h
/petsc/src/docs/doxygen/manual/user/acknowl.h
/petsc/src/docs/doxygen/manual/user/additional/additional.h
/petsc/src/docs/doxygen/manual/user/additional/advanced.h
/petsc/src/docs/doxygen/manual/user/additional/makefiles.h
/petsc/src/docs/doxygen/manual/user/additional/other-features.h
/petsc/src/docs/doxygen/manual/user/additional/profiling.h
/petsc/src/docs/doxygen/manual/user/additional/tuning.h
/petsc/src/docs/doxygen/manual/user/additional/unstructured.h
/petsc/src/docs/doxygen/manual/user/introduction/getting-started.h
/petsc/src/docs/doxygen/manual/user/introduction/introduction.h
/petsc/src/docs/doxygen/manual/user/main.h
/petsc/src/docs/doxygen/manual/user/programming/adifor.h
/petsc/src/docs/doxygen/manual/user/programming/fortran.h
/petsc/src/docs/doxygen/manual/user/programming/ksp.h
/petsc/src/docs/doxygen/manual/user/programming/matlab.h
/petsc/src/docs/doxygen/manual/user/programming/matrices.h
/petsc/src/docs/doxygen/manual/user/programming/programming.h
/petsc/src/docs/doxygen/manual/user/programming/pseudo.h
/petsc/src/docs/doxygen/manual/user/programming/snes.h
/petsc/src/docs/doxygen/manual/user/programming/ts.h
/petsc/src/docs/doxygen/manual/user/programming/vectors.h
/petsc/src/docs/doxygen/mat-commentfilter.sh
/petsc/src/docs/doxygen/pc-commentfilter.sh
/petsc/src/docs/doxygen/petscdoxygen.h
/petsc/src/docs/doxygen/petscexamples.h
/petsc/src/docs/doxygen/pf-commentfilter.sh
/petsc/src/docs/doxygen/snes-commentfilter.sh
/petsc/src/docs/doxygen/ts-commentfilter.sh
/petsc/src/docs/doxygen/vec-commentfilter.sh
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu
/petsc/src/mat/impls/aij/mpi/mpiptap.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/nasm/nasm.c
/petsc/src/snes/impls/test/snestest.c
/petsc/src/snes/impls/vi/rs/virs.c
/petsc/src/snes/impls/vi/rsaug/virsaug.c
/petsc/src/snes/impls/vi/ss/viss.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesob.c
/petsc/src/snes/linesearch/impls/bt/linesearchbt.c
/petsc/src/snes/linesearch/impls/l2/linesearchl2.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/snes/utils/dmsnes.c
/petsc/src/snes/utils/makefile
/petsc/src/snes/utils/mesh/dmmeshsnes.c
/petsc/src/snes/utils/mesh/makefile
/petsc/src/sys/classes/draw/impls/opengl/openglops.c
/petsc/src/sys/classes/viewer/impls/binary/binv.c
/petsc/src/sys/error/err.c
/petsc/src/sys/fileio/mpiuopen.c
/petsc/src/sys/info/verboseinfo.c
/petsc/src/sys/logging/plog.c
/petsc/src/sys/threadcomm/impls/openmp/tcopenmp.c
/petsc/src/sys/threadcomm/impls/pthread/tclockfree.c
/petsc/src/sys/threadcomm/interface/threadcomm.c
/petsc/src/sys/threadcomm/interface/threadcommred.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9bus.c
/petsc/src/ts/impls/arkimex/arkimex.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tscreate.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/pf/interface/pf.c
/petsc/src/vec/vec/impls/seq/bvec1.c
/petsc/src/vec/vec/interface/rvector.c
07475bc111-Jan-2013 Barry Smith <bsmith@mcs.anl.gov>

don't list unneeded /*I includes; they clutter the manual pages

Hg-commit: e78ba20ae96445858089a43bccd0933d14f8ae95


/petsc/config/builder.py
/petsc/include/finclude/ftn-custom/petscvec.h90
/petsc/include/petsc-private/fortranimpl.h
/petsc/include/petsc-private/petscimpl.h
/petsc/include/petsc-private/pleximpl.h
/petsc/include/petscdmplex.h
/petsc/include/petscksp.h
/petsc/include/petscts.h
/petsc/src/dm/impls/akkt/dmakkt.c
fdda.c
hypre/mhyp.c
/petsc/src/dm/impls/patch/examples/tests/ex1.c
/petsc/src/dm/impls/patch/patch.c
/petsc/src/dm/impls/plex/examples/tests/ex4.c
/petsc/src/dm/impls/plex/examples/tests/output/ex4_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_2.out
/petsc/src/dm/impls/plex/examples/tests/output/ex4_3.out
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/plex/plexvtk.c
/petsc/src/dm/impls/plex/plexvtu.c
/petsc/src/dm/impls/redundant/dmredundant.c
/petsc/src/dm/impls/shell/dmshell.c
/petsc/src/dm/impls/sliced/sliced.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/features/gpus.html
/petsc/src/ksp/ksp/impls/bcgsl/bcgsl.c
/petsc/src/ksp/ksp/impls/bcgsl/bcgslimpl.h
/petsc/src/ksp/ksp/impls/gmres/fgmres/ftn-custom/zmodpcff.c
/petsc/src/ksp/ksp/interface/dmksp.c
/petsc/src/ksp/ksp/interface/ftn-custom/zitfuncf.c
/petsc/src/ksp/ksp/utils/schurm.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/composite/composite.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/galerkin/galerkin.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/tools.c
/petsc/src/ksp/pc/impls/ksp/pcksp.c
/petsc/src/ksp/pc/impls/redundant/redundant.c
/petsc/src/mat/examples/tests/ex93.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex93_1.out
/petsc/src/mat/examples/tests/output/ex93_2.out
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/aij/mpi/mpiptap.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/impls/elemental/matelem.cxx
/petsc/src/mat/impls/maij/maij.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tutorials/ex15.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/impls/nasm/nasm.c
/petsc/src/snes/interface/ftn-custom/zsnesf.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/utils/ftn-custom/zdmdasnesf.c
/petsc/src/sys/classes/sf/impls/window/makefile
/petsc/src/sys/classes/sf/impls/window/sfwindow.c
/petsc/src/sys/classes/sf/interface/sf.c
/petsc/src/sys/classes/sf/interface/sfregi.c
/petsc/src/sys/classes/viewer/impls/ams/amsopen.c
/petsc/src/sys/objects/fcallback.c
/petsc/src/sys/objects/inherit.c
/petsc/src/sys/objects/makefile
/petsc/src/sys/objects/options.c
/petsc/src/sys/objects/pname.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex10.c
/petsc/src/ts/examples/tutorials/ex26.c
/petsc/src/ts/examples/tutorials/ex29.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/examples/tutorials/output/ex29.out
/petsc/src/ts/examples/tutorials/power_grid/ex5.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9bus.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/makefile
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/petscoptions
/petsc/src/ts/impls/arkimex/arkimex.c
/petsc/src/ts/impls/implicit/sundials/sundials.h
/petsc/src/ts/interface/ts.c
/petsc/src/ts/utils/dmts.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/vec/interface/f90-custom/zvectorf90.c
/petsc/src/vec/vec/interface/vecregall.c
/petsc/src/vec/vec/utils/veccusp/vscatcusp.c
/petsc/src/vec/vec/utils/vscat.c
03b7bb1108-Jan-2013 Peter Brune <brune@mcs.anl.gov>

Removed SNESComputeBlockFunction/Jacobian_DMDA() and DMDAGetLocalBlockInfo()

Hg-commit: 5fa3972ae402ba50e0fe8d48351e7e933ed7317c

d9c9ebe507-Jan-2013 Peter Brune <brune@mcs.anl.gov>

Removed all overlap cruft from DMSetUp_DA_1/2/3D

Hg-commit: 461d91d3c8e1dbfa7cf6c0dae2b6e4c4c0f8918b

285ae30507-Jan-2013 Peter Brune <brune@mcs.anl.gov>

Made DMDACreateDomainDecomposition(Scatters)() use DMDACreatePatchIS() rather than lots of confusing loops.

Hg-commit: 78c3ef96b2606b460c2cb4b8ef04f60d1c952f12

ff9846d907-Jan-2013 Peter Brune <brune@mcs.anl.gov>

Added DMDACreatePatchIS, which gives the global indices of an arbitrary piece of cartesian real-estate in parallel.

Hg-commit: ae428b245b50b12fbb04bd00d52fdd2c0eafee1b


/petsc/config/PETSc/packages/SuperLU_DIST.py
/petsc/config/builder.py
/petsc/config/cmakeboot.py
/petsc/include/petsc-private/patchimpl.h
/petsc/include/petsc-private/vecimpl.h
/petsc/include/petscdmda.h
/petsc/include/petscdmpatch.h
/petsc/include/petscsys.h
/petsc/include/petscthreadcomm.h
/petsc/include/petscvec.h
/petsc/makefile
/petsc/src/dm/examples/tutorials/ex14.c
dadd.c
/petsc/src/dm/impls/patch/examples/tests/ex1.c
/petsc/src/dm/impls/patch/patch.c
/petsc/src/dm/impls/patch/patchcreate.c
/petsc/src/dm/impls/plex/examples/tests/ex1.c
/petsc/src/dm/impls/plex/examples/tests/ex4.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexvtk.c
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/ksp/examples/tutorials/ex39.c
/petsc/src/ksp/ksp/examples/tutorials/ex40.c
/petsc/src/ksp/ksp/examples/tutorials/ex56.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex56_0.out
/petsc/src/ksp/ksp/impls/bcgs/bcgs.c
/petsc/src/ksp/ksp/impls/bcgs/fbcgs/fbcgs.c
/petsc/src/ksp/ksp/impls/bcgs/fbcgsr/fbcgsr.c
/petsc/src/ksp/ksp/impls/bcgsl/bcgsl.c
/petsc/src/ksp/ksp/impls/cg/cg.c
/petsc/src/ksp/ksp/impls/cg/gltr/gltr.c
/petsc/src/ksp/ksp/impls/cg/nash/nash.c
/petsc/src/ksp/ksp/impls/cg/stcg/stcg.c
/petsc/src/ksp/ksp/impls/cheby/cheby.c
/petsc/src/ksp/ksp/impls/cr/cr.c
/petsc/src/ksp/ksp/impls/gcr/gcr.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/impls/gmres/gmreig.c
/petsc/src/ksp/ksp/impls/ibcgs/ibcgs.c
/petsc/src/ksp/ksp/impls/lsqr/lsqr.c
/petsc/src/ksp/ksp/impls/minres/minres.c
/petsc/src/ksp/ksp/impls/qcg/qcg.c
/petsc/src/ksp/ksp/impls/rich/rich.c
/petsc/src/ksp/ksp/impls/rich/richscale.c
/petsc/src/ksp/ksp/impls/specest/specest.c
/petsc/src/ksp/pc/impls/factor/ilu/ilu.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/gamg.h
/petsc/src/ksp/pc/impls/gamg/tools.c
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/ksp/pc/impls/svd/svd.c
/petsc/src/ksp/pc/impls/tfs/xxt.c
/petsc/src/ksp/pc/impls/tfs/xyt.c
/petsc/src/mat/coarsen/impls/hem/hem.c
/petsc/src/mat/coarsen/impls/mis/mis.c
/petsc/src/mat/examples/tests/ex14.c
/petsc/src/mat/examples/tests/ex19.c
/petsc/src/mat/examples/tests/ex21.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/impls/aij/mpi/mmaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpiptap.c
/petsc/src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/bas/basfactor.c
/petsc/src/mat/impls/aij/seq/inode.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/superlu/superlu.c
/petsc/src/mat/impls/aij/seq/symtranspose.c
/petsc/src/mat/impls/aij/seq/umfpack/umfpack.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/mat/impls/sbaij/mpi/sbaijov.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/snes/impls/fas/fasfunc.c
/petsc/src/snes/impls/gs/snesgs.c
/petsc/src/snes/impls/nasm/nasm.c
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/impls/shell/snesshell.c
/petsc/src/snes/impls/vi/rs/virs.c
/petsc/src/snes/impls/vi/rsaug/virsaug.c
/petsc/src/snes/impls/vi/ss/viss.c
/petsc/src/snes/interface/noise/snesmfj2.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesj2.c
/petsc/src/snes/interface/snesut.c
/petsc/src/snes/linesearch/impls/basic/linesearchbasic.c
/petsc/src/snes/linesearch/impls/bt/linesearchbt.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/sys/classes/random/impls/rand/rand.c
/petsc/src/sys/classes/random/impls/rand48/rand48.c
/petsc/src/sys/classes/random/impls/sprng/sprng.c
/petsc/src/sys/classes/sf/impls/basic/sfbasic.c
/petsc/src/sys/classes/viewer/impls/ascii/filev.c
/petsc/src/sys/classes/viewer/impls/binary/binv.c
/petsc/src/sys/error/err.c
/petsc/src/sys/error/errtrace.c
/petsc/src/sys/objects/subcomm.c
/petsc/src/sys/objects/tagm.c
/petsc/src/sys/utils/makefile
/petsc/src/sys/utils/mpits.c
/petsc/src/ts/characteristic/interface/characteristic.c
/petsc/src/ts/impls/arkimex/arkimex.c
/petsc/src/ts/impls/implicit/gl/gl.c
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/ts/interface/ts.c
/petsc/src/vec/vec/examples/tests/ex37.c
/petsc/src/vec/vec/impls/mpi/pbvec.c
/petsc/src/vec/vec/impls/nest/vecnest.c
/petsc/src/vec/vec/impls/seq/vsection.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/utils/comb.c
/petsc/src/vec/vec/utils/vinv.c
3bf036e203-Jan-2013 Barry Smith <bsmith@mcs.anl.gov>

fixed many more missing CHKERRQ()

Hg-commit: 7ee3b3a915c7ec91d5cefc4d6974e423e3fd9435

9669e4d803-Jan-2013 Barry Smith <bsmith@mcs.anl.gov>

removed the silly #if defined(PETSC_USE_COMPLEX) special cases when the complex version gives the exact same results as the real version for real, i.e. PetscConj, PetscRealPart, do nothing and are ha

removed the silly #if defined(PETSC_USE_COMPLEX) special cases when the complex version gives the exact same results as the real version for real, i.e. PetscConj, PetscRealPart, do nothing and are harmless for the real case
the less #if def code duplication we have the better

Hg-commit: 158afdac623e9fb04c1dbe14153c0895e6c4feef

show more ...


/petsc/config/builder.py
/petsc/include/petscblaslapack.h
/petsc/include/petscmath.h
/petsc/include/petscsys.h
/petsc/src/dm/examples/tutorials/ex65dm.c
/petsc/src/dm/examples/tutorials/makefile
/petsc/src/dm/impls/akkt/dmakkt.c
da2.c
/petsc/src/dm/impls/patch/patch.c
/petsc/src/dm/impls/plex/examples/tests/ex1.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexvtu.c
/petsc/src/dm/impls/redundant/dmredundant.c
/petsc/src/ksp/ksp/examples/tutorials/ex56.c
/petsc/src/ksp/ksp/impls/cg/cg.c
/petsc/src/ksp/ksp/impls/cg/pipecg/pipecg.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/impls/gmres/fgmres/fgmres.c
/petsc/src/ksp/ksp/impls/gmres/gmres.c
/petsc/src/ksp/ksp/impls/gmres/lgmres/lgmres.c
/petsc/src/ksp/ksp/impls/qcg/qcg.c
/petsc/src/ksp/ksp/impls/tcqmr/tcqmr.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/gamg/tools.c
/petsc/src/mat/coarsen/coarsen.c
/petsc/src/mat/coarsen/impls/hem/hem.c
/petsc/src/mat/coarsen/impls/mis/mis.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/baij/seq/baij2.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/mffd/mffddef.c
/petsc/src/mat/impls/sbaij/seq/sbaij2.c
/petsc/src/mat/matfd/fdmatrix.c
/petsc/src/snes/examples/tests/ex10.c
/petsc/src/snes/examples/tests/ex16.c
/petsc/src/snes/examples/tests/ex8.c
/petsc/src/snes/examples/tutorials/ex58.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/interface/noise/snesmfj2.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/sys/classes/bag/makefile
/petsc/src/sys/classes/draw/makefile
/petsc/src/sys/classes/matlabengine/makefile
/petsc/src/sys/classes/sf/makefile
/petsc/src/sys/classes/viewer/interface/viewreg.c
/petsc/src/sys/classes/viewer/makefile
/petsc/src/sys/fileio/sysio.c
/petsc/src/sys/logging/plog.c
/petsc/src/sys/objects/ftn-custom/zstart.c
/petsc/src/sys/objects/init.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/shell/examples/tests/test1.c
/petsc/src/sys/shell/interface/sysshell.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/examples/tutorials/phasefield/biharmonic2.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/vec/impls/mpi/pbvec.c
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/impls/seq/dvec2.c
/petsc/src/vec/vec/utils/vinv.c
/petsc/src/vec/vec/utils/vscat.c
/petsc/tutorials/python/makefile
552f735802-Jan-2013 Jed Brown <jed@59A2.org>

Rename DMComplex -> DMPlex

Hg-commit: f768b4255f3d1c199623a7a4aeb9be630bec7076


/petsc/config/builder.py
/petsc/include/finclude/ftn-custom/petscdmplex.h90
/petsc/include/finclude/ftn-custom/petscdmplexdef.h90
/petsc/include/finclude/petsc.h
/petsc/include/finclude/petsc.h90
/petsc/include/finclude/petscdmplex.h
/petsc/include/finclude/petscdmplex.h90
/petsc/include/finclude/petscdmplexdef.h
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petsc-private/pleximpl.h
/petsc/include/petsc-private/sfimpl.h
/petsc/include/petscdm.h
/petsc/include/petscdmmesh.h
/petsc/include/petscdmplex.h
/petsc/include/petscmath.h
/petsc/include/petscsf.h
/petsc/include/petscsys.h
/petsc/include/sieve/ISieve.hh
/petsc/src/dm/ao/interface/dlregisdm.c
fdda.c
/petsc/src/dm/impls/makefile
/petsc/src/dm/impls/mesh/mesh.c
/petsc/src/dm/impls/plex/examples/makefile
/petsc/src/dm/impls/plex/examples/tests/ex1.c
/petsc/src/dm/impls/plex/examples/tests/ex1f90.F
/petsc/src/dm/impls/plex/examples/tests/ex2f90.F
/petsc/src/dm/impls/plex/examples/tests/ex3.c
/petsc/src/dm/impls/plex/examples/tests/makefile
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/petsc/src/dm/impls/plex/f90-custom/zplexf90.c
/petsc/src/dm/impls/plex/ftn-custom/makefile
/petsc/src/dm/impls/plex/ftn-custom/zplex.c
/petsc/src/dm/impls/plex/makefile
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/plex/plexexodusii.c
/petsc/src/dm/impls/plex/plexlabel.c
/petsc/src/dm/impls/plex/plexpoint.c
/petsc/src/dm/impls/plex/plexvtk.c
/petsc/src/dm/impls/plex/plexvtu.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmregall.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/pc/impls/asm/asm.c
/petsc/src/ksp/pc/impls/gasm/gasm.c
/petsc/src/mat/impls/maij/maij.c
/petsc/src/mat/impls/maij/maij.h
/petsc/src/snes/examples/tutorials/ex31.c
/petsc/src/snes/examples/tutorials/ex52.c
/petsc/src/snes/examples/tutorials/ex62.c
/petsc/src/snes/examples/tutorials/ex72.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/snes/utils/makefile
/petsc/src/sys/classes/sf/impls/basic/sfbasic.c
/petsc/src/sys/classes/sf/impls/window/sfwindow.c
/petsc/src/sys/classes/sf/interface/sf.c
/petsc/src/sys/objects/ftn-custom/zstart.c
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/petsc/src/sys/objects/pinit.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/vec/vec/impls/seq/vsection.c
/petsc/src/vec/vec/utils/comb.c
/petsc/src/vec/vec/utils/vinv.c
/petsc/src/vec/vec/utils/vscat.c
11689aeb01-Jan-2013 Jed Brown <jed@59A2.org>

Relocate Vec creation with Section so it can be used by DMDA and DMComplex

Hg-commit: 29860ecac7a53df5f615e4e5d2dad88d9afd9d72

2fff38dd31-Dec-2012 Jed Brown <jed@59A2.org>

Get DMComplex garbage out of interface/dm.c; fixes C++ --with-c-support

Hg-commit: 25766d8ee6eeda976bba5d59f18234db41de2fb8


/petsc/conf/rules
/petsc/config/cmakeboot.py
/petsc/include/mpiuni/mpi.h
/petsc/include/mpiuni/mpif.h
/petsc/include/petsc-private/compleximpl.h
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/petsc/include/petscsf.h
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/petsc/src/dm/ao/impls/memscalable/aomemscalable.c
/petsc/src/dm/impls/complex/complex.c
/petsc/src/dm/impls/complex/complexcreate.c
/petsc/src/dm/impls/complex/plexvtu.c
gr1.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/pc/impls/gasm/gasm.c
/petsc/src/ksp/pc/impls/openmp/hpc.c
/petsc/src/mat/impls/adj/mpi/mpiadj.c
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/petsc/src/mat/impls/aij/mpi/mpiov.c
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/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/mpi/sbaijov.c
/petsc/src/sys/classes/draw/impls/x/xops.c
/petsc/src/sys/classes/draw/interface/dmouse.c
/petsc/src/sys/classes/sf/examples/tutorials/makefile
/petsc/src/sys/classes/sf/examples/tutorials/output/ex1_1_basic.out
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/petsc/src/sys/classes/sf/impls/basic/makefile
/petsc/src/sys/classes/sf/impls/basic/sfbasic.c
/petsc/src/sys/classes/sf/impls/makefile
/petsc/src/sys/classes/sf/impls/window/sfwindow.c
/petsc/src/sys/classes/sf/interface/sf.c
/petsc/src/sys/classes/sf/interface/sfregi.c
/petsc/src/sys/classes/sf/interface/sftype.c
/petsc/src/sys/error/err.c
/petsc/src/sys/fileio/fretrieve.c
/petsc/src/sys/logging/plog.c
/petsc/src/sys/objects/ftn-custom/zstart.c
/petsc/src/sys/objects/inherit.c
/petsc/src/sys/objects/init.c
/petsc/src/sys/objects/mpinit.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/objects/pname.c
/petsc/src/sys/objects/tagm.c
/petsc/src/sys/utils/pdisplay.c
/petsc/src/sys/utils/sseenabled.c
/petsc/src/vec/is/interface/index.c
/petsc/src/vec/is/utils/iscomp.c
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/impls/seq/bvec3.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/utils/vinv.c
/petsc/src/vec/vec/utils/vscat.c
/petsc/tutorials/makefile
bcaeba4d31-Dec-2012 Barry Smith <bsmith@mcs.anl.gov>

removed adic stuff

Hg-commit: 99933b6f66a48c78b00a3952edfaf6191df65340

5a4671ae30-Dec-2012 Barry Smith <bsmith@mcs.anl.gov>

removed trailing spaces from all files

Hg-commit: 1cfa55059afe46c5145e0e830cd797b97216abfb


/petsc/bin/TOPSGenerator.py
/petsc/bin/TOPSInstaller.py
/petsc/bin/adiforfix.py
/petsc/bin/adprocess.py
/petsc/bin/julia/PETSc.jl
/petsc/bin/julia/examples/tutorials/exKSP.jl
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/petsc/config/PETSc/packages/Chaco.py
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da.c
da2.c
dacorn.c
f90-custom/makefile
fdda.c
ftn-custom/makefile
makefile
usfft/makefile
utils/makefile
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/petsc/src/vec/vec/impls/seq/ftn-kernels/fmaxpy.F
/petsc/src/vec/vec/impls/seq/ftn-kernels/fmdot.F
/petsc/src/vec/vec/impls/seq/ftn-kernels/fnorm.F
/petsc/src/vec/vec/impls/seq/ftn-kernels/fwaxpy.F
/petsc/src/vec/vec/impls/seq/ftn-kernels/fwaxpy.h
/petsc/src/vec/vec/impls/seq/ftn-kernels/fxtimesy.F
/petsc/src/vec/vec/impls/seq/ftn-kernels/makefile
/petsc/src/vec/vec/impls/seq/seqcusp/cuspvecimpl.h
/petsc/src/vec/vec/impls/seq/seqcusp/makefile
/petsc/src/vec/vec/impls/seq/seqcusp/veccusp.cu
/petsc/src/vec/vec/impls/shared/makefile
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/petsc/src/vec/vec/utils/matlab/gcreatev.c
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/petsc/tutorials/python/makefile
8cbdbec630-Dec-2012 Barry Smith <bsmith@mcs.anl.gov>

removed all incorrect spaces before CHKERR...

Hg-commit: 653d9985c7cfe8fed21a37081a5b64f5e24e6c17


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/petsc/config/examples/arch-moab.py
/petsc/include/petsclog.hh
/petsc/include/sieve/LabelSifter.hh
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/petsc/src/contrib/fun3d/comp/flow.c
/petsc/src/dm/examples/tests/ex21.c
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/petsc/src/dm/examples/tutorials/ex10.c
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/petsc/src/dm/examples/tutorials/ex9.c
/petsc/src/dm/impls/akkt/dmakkt.c
/petsc/src/dm/impls/composite/pack.c
gr2.c
usfft/matusfft.c
/petsc/src/dm/impls/mesh/examples/tests/ex02.c
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/petsc/src/dm/impls/redundant/dmredundant.c
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/petsc/src/docs/tex/manual/developers.tex
/petsc/src/ksp/ksp/examples/tutorials/ex50.c
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/petsc/src/ksp/pc/impls/sacusp/sacusp.cu
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/petsc/src/mat/coarsen/coarsen.c
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/petsc/src/mat/impls/ij/matij.c
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/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/nest/matnest.c
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/petsc/src/mat/interface/dlregismat.c
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/petsc/src/snes/examples/tests/ex10.c
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/petsc/src/ts/characteristic/interface/characteristic.c
/petsc/src/ts/examples/tests/ex4.c
/petsc/src/ts/examples/tutorials/ex10.c
/petsc/src/ts/examples/tutorials/phasefield/biharmonic2.c
/petsc/src/ts/impls/implicit/alpha/alpha.c
/petsc/src/ts/impls/implicit/sundials/sundials.c
/petsc/src/ts/interface/ts.c
/petsc/src/vec/is/impls/general/general.c
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5647e89729-Dec-2012 Barry Smith <bsmith@mcs.anl.gov>

commit after merge

Hg-commit: 840cdd21c4c213d87c8cb36c0b53d9b91c6d283e

db3019b129-Dec-2012 Barry Smith <bsmith@mcs.anl.gov>

used PetscClipInterval() instead of non-standard stupid macro

Hg-commit: 8d6b62e9d51361ebc0d67885c7f0299677ce0cc2

2197688c28-Dec-2012 Jed Brown <jed@59A2.org>

Avoid using uninitialized data when not using all 3 dimensions

Hg-commit: 927c1c8e992b08b51dbaf01880e6d58c6c04a482

026bdcb327-Dec-2012 Jose Roman <jroman@dsic.upv.es>

Fix broken build; bad code in 178f9fe

Hg-commit: 60fe48695ce341d5007ca67d48b47a43591035ee

f3f0eb1926-Dec-2012 Barry Smith <bsmith@mcs.anl.gov>

forced values in PetscViewerDrawSetBounds() to alwways be applied when doing 2d contour plots with DMDA and VecView.

Hg-commit: 178f9fee549bd10f3b4b64313dacb15c48b47923

ae4f298a26-Dec-2012 Barry Smith <bsmith@mcs.anl.gov>

DMDA 1d uses ofill to reduce the number of colors needed to compute Jacobian

Hg-commit: 9f0ebbc75c4af8a1c0218d034217009466841c99

ce308e1d26-Dec-2012 Barry Smith <bsmith@mcs.anl.gov>

added support for ofill for DMDA1d

Hg-commit: be9ba88f68c62678fd3ffe9517ccfd23a321ceb5

109c934425-Dec-2012 Barry Smith <bsmith@mcs.anl.gov>

added names for coordinate directions to DMDA
added ugly printing of coordinate directions in 2d countour plots from DAs

Hg-commit: 0f83f87db1ff110511388bbce0cdaff89adc7b54

e3f3e4b624-Dec-2012 Barry Smith <bsmith@mcs.anl.gov>

memory leak in DMDASelectFields
allow null viewer format in PetscOptionsGetViewer()
DMDASetNumProcs() computes missing proc if one is provided in 2d
started contour viewer for ex10

Hg-commit: b2a4a6

memory leak in DMDASelectFields
allow null viewer format in PetscOptionsGetViewer()
DMDASetNumProcs() computes missing proc if one is provided in 2d
started contour viewer for ex10

Hg-commit: b2a4a6a7bd64fcd82cc6a58540b6ed8c799f585f

show more ...

4e6118ee24-Dec-2012 Barry Smith <bsmith@mcs.anl.gov>

added -draw_fields_by_name name1,name2,name3

Hg-commit: d69f1842030af04c76ec3eee9d921e1827402d71

c2859e5e21-Dec-2012 Barry Smith <bsmith@mcs.anl.gov>

added test example for dmda 3d with mirroring
started adding support to dmda 3d for mirroring

Hg-commit: 081d7404b8372f8038fb1108b516bcc64e464936

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