plex - OpenGrok history log for /petsc/src/dm/impls/plex

Revision	Date	Author	Comments (<<< Hide modified files) (Show modified files >>>)
da87d8e5	19-Jul-2022	Matthew G. Knepley <knepley@gmail.com>	Fix examples (with completion) tests/ex20.c tests/ex35.c tests/output/ex19_2d_sep.out tests/output/ex19_3d.out tests/output/ex19_3d_parmetis_met0.out tests/output/ex1_p4est_s2t_bugfaces_3d.out tests/output/ex1_ref_alfeld3d_0.out tests/output/ex20_3d_ctetgen.out tests/output/ex20_3d_tetgen.out tests/output/ex29_0.out tests/output/ex35_tet.out tests/output/ex35_tet_interp.out tests/output/ex44_tet_adapt_0_alt.out tests/output/ex7_10.out /petsc/src/snes/tutorials/output/ex12_3d_p1_1.out /petsc/src/snes/tutorials/output/ex12_3d_p1_neumann_0.out /petsc/src/snes/tutorials/output/ex69_p2p1fetidp.out /petsc/src/snes/tutorials/output/ex69_p2p1fetidp_allp.out /petsc/src/snes/tutorials/output/ex69_p2p1fetidp_deluxe.out /petsc/src/snes/tutorials/output/ex69_p2p1fetidp_deluxe_discharm.out /petsc/src/snes/tutorials/output/ex69_p2p1fetidp_discharm.out /petsc/src/snes/tutorials/output/ex69_p2p1fetidp_lumped.out /petsc/src/snes/tutorials/output/ex69_p2p1fetidp_olof.out
79a4bf6c	17-Jul-2022	Matthew G. Knepley <knepley@gmail.com>	Plex ex44: Turn on completion test tests/ex44.c
c22d3578	17-Jul-2022	Matthew G. Knepley <knepley@gmail.com>	Plex: Complete boundary label on simplex box plexcreate.c
27804920	15-Jul-2022	Matthew G. Knepley <knepley@gmail.com>	Fix examples (without completion) tests/output/ex20_3d_ctetgen.out tests/output/ex20_3d_tetgen.out tests/output/ex35_tet.out tests/output/ex35_tet_interp.out /petsc/src/snes/tutorials/output/ex12_tri_p1_adapt_uniform_mmg.out /petsc/src/snes/tutorials/output/ex12_tri_p1_adapt_uniform_parmmg.out
af226901	08-Jun-2022	Matthew G. Knepley <knepley@gmail.com>	Plex: Fix labeling for TetGen and CTetGen generators/ctetgen/ctetgenerate.c generators/tetgen/tetgenerate.cxx
6cdd483e	01-Aug-2022	Pierre Jolivet <pierre@joliv.et>	configure: add p4est version check /petsc/config/BuildSystem/config/packages/p4est.py /petsc/config/BuildSystem/config/packages/python.py /petsc/config/examples/arch-ci-mswin-gnu.py /petsc/include/petscblaslapack.h /petsc/makefile tests/ex1.c /petsc/src/ksp/ksp/tutorials/amrex/makefile /petsc/src/ksp/ksp/tutorials/ex21.c /petsc/src/ksp/ksp/tutorials/ex59.c /petsc/src/ksp/ksp/tutorials/ex67.c /petsc/src/ksp/ksp/tutorials/makefile /petsc/src/mat/interface/matrix.c /petsc/src/snes/tutorials/ex5f.F90 /petsc/src/snes/tutorials/makefile /petsc/src/snes/tutorials/output/ex5f_1.testout /petsc/src/sys/python/pythonsys.c /petsc/src/sys/tests/makefile /petsc/src/tao/pde_constrained/tutorials/parabolic.c /petsc/src/vec/vec/tests/makefile /petsc/src/vec/vec/tutorials/makefile
9f165102	29-Jul-2022	Satish Balay <balay@mcs.anl.gov>	Fix regression in main due to https://gitlab.com/petsc/petsc/-/merge_requests/5430 /petsc/include/petsc/private/vecimpl_kokkos.hpp tutorials/output/ex8_3d_q1_periodic_project.out /petsc/src/ksp/pc/impls/vpbjacobi/cuda/makefile /petsc/src/ksp/pc/impls/vpbjacobi/cuda/vpbjacobi_cuda.cu /petsc/src/ksp/pc/impls/vpbjacobi/kokkos/makefile /petsc/src/ksp/pc/impls/vpbjacobi/kokkos/vpbjacobi_kok.kokkos.cxx /petsc/src/ksp/pc/impls/vpbjacobi/makefile /petsc/src/ksp/pc/impls/vpbjacobi/vpbjacobi.c /petsc/src/ksp/pc/impls/vpbjacobi/vpbjacobi.h /petsc/src/snes/tests/ex5.c /petsc/src/snes/tests/output/ex5_1.out /petsc/src/vec/vec/impls/seq/kokkos/veckok.kokkos.cxx /petsc/src/vec/vec/impls/seq/kokkos/veckokkosimpl.hpp
26450a51	29-Jul-2022	Satish Balay <balay@mcs.anl.gov>	Merge branch 'knepley/fix-plex-extrude-orientation' into 'main' Knepley/fix plex extrude orientation See merge request petsc/petsc!5430 plexcreate.c plexhdf5.c tests/ex44.c tests/output/ex1_box_3d.out tests/output/ex1_p4est_bug_overlapsf.out tests/output/ex1_p4est_periodic_3d.out tests/output/ex29_1.out tests/output/ex29_quad_0.out tests/output/ex35_hex_interp.out tests/output/ex44_hex_adapt_0.out tests/output/ex44_tet_adapt_0.out tests/output/ex8_5.out transform/impls/extrude/plextrextrude.c tutorials/output/ex8_3d_q1_periodic.out tutorials/output/ex8_3d_q2_periodic.out /petsc/src/dm/impls/swarm/tests/output/ex4_bsi_3d_1.out /petsc/src/dm/impls/swarm/tests/output/ex4_bsi_3d_2.out /petsc/src/dm/impls/swarm/tests/output/ex4_bsi_3d_3.out /petsc/src/dm/impls/swarm/tests/output/ex4_bsi_3d_4.out /petsc/src/dm/impls/swarm/tests/output/ex4_dg_3d.out /petsc/src/dm/impls/swarm/tests/output/ex4_im_3d.out /petsc/src/snes/tests/output/ex13_bench.out /petsc/src/snes/tutorials/output/ex13_kokkos.out /petsc/src/snes/tutorials/output/ex56_0.out /petsc/src/snes/tutorials/output/ex56_cuda.out /petsc/src/snes/tutorials/output/ex56_mpiaijmkl.out /petsc/src/snes/tutorials/output/ex56_seqaijmkl.out
96625334	28-Jul-2022	Satish Balay <balay@mcs.anl.gov>	Merge branch 'knepley/fix-plex-gmsh-labels' into 'main' Plex: Straighten out Gmsh labels See merge request petsc/petsc!5478 /petsc/config/BuildSystem/config/packages/parmetis.py /petsc/doc/docs/manual/advanced.rst plexcreate.c plexgmsh.c tests/ex99.c tests/output/ex1_exo_0.out tests/output/ex1_exo_1.out tests/output/ex1_exo_2.out tests/output/ex1_exo_3.out tests/output/ex1_exo_4.out tests/output/ex1_gmsh_1.out tests/output/ex1_gmsh_10.out tests/output/ex1_gmsh_10_periodic_0.out tests/output/ex1_gmsh_11.out tests/output/ex1_gmsh_11_periodic_0.out tests/output/ex1_gmsh_12.out tests/output/ex1_gmsh_14_ext.out tests/output/ex1_gmsh_14_ext_s2t.out tests/output/ex1_gmsh_2.out tests/output/ex1_gmsh_3.out tests/output/ex1_gmsh_3d_legacy_v22_bin.out tests/output/ex1_gmsh_4.out tests/output/ex1_gmsh_5.out tests/output/ex1_gmsh_6.out tests/output/ex1_gmsh_7.out tests/output/ex1_gmsh_8.out tests/output/ex1_gmsh_9.out tests/output/ex1_gmsh_9_periodic_0.out tests/output/ex1_p4est_gmsh_periodic.out tests/output/ex99_msh-hex.out tests/output/ex99_msh-qua.out tests/output/ex99_msh-seg.out tests/output/ex99_msh-tet.out tests/output/ex99_msh-tri.out tests/output/ex99_msh-vtx.out tests/output/ex99_msh-wed.out /petsc/src/ksp/ksp/impls/gmres/borthog.c /petsc/src/ksp/ksp/impls/gmres/borthog2.c /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/baij/mpi/mpibaij.c /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c /petsc/src/mat/impls/sell/mpi/mpisell.c /petsc/src/snes/tutorials/output/ex12_2d_p1_neumann_0.out /petsc/src/snes/tutorials/output/ex12_2d_p2_neumann_0.out /petsc/src/snes/tutorials/output/ex12_2d_p2_neumann_1.out /petsc/src/snes/tutorials/output/ex12_3d_p1_neumann_0.out /petsc/src/ts/tutorials/output/ex11_glvis_adv_2d_tet.out
c1599abf	27-Jul-2022	Matthew G. Knepley <knepley@gmail.com>	Update test output tests/ex99.c tests/output/ex1_exo_0.out tests/output/ex1_exo_1.out tests/output/ex1_exo_2.out tests/output/ex1_exo_3.out tests/output/ex1_exo_4.out tests/output/ex1_gmsh_1.out tests/output/ex1_gmsh_10.out tests/output/ex1_gmsh_10_periodic_0.out tests/output/ex1_gmsh_11.out tests/output/ex1_gmsh_11_periodic_0.out tests/output/ex1_gmsh_12.out tests/output/ex1_gmsh_14_ext.out tests/output/ex1_gmsh_14_ext_s2t.out tests/output/ex1_gmsh_2.out tests/output/ex1_gmsh_3.out tests/output/ex1_gmsh_3d_legacy_v22_bin.out tests/output/ex1_gmsh_4.out tests/output/ex1_gmsh_5.out tests/output/ex1_gmsh_6.out tests/output/ex1_gmsh_7.out tests/output/ex1_gmsh_8.out tests/output/ex1_gmsh_9.out tests/output/ex1_gmsh_9_periodic_0.out tests/output/ex1_p4est_gmsh_periodic.out tests/output/ex99_msh-hex.out tests/output/ex99_msh-qua.out tests/output/ex99_msh-seg.out tests/output/ex99_msh-tet.out tests/output/ex99_msh-tri.out tests/output/ex99_msh-vtx.out tests/output/ex99_msh-wed.out /petsc/src/snes/tutorials/output/ex12_2d_p1_neumann_0.out /petsc/src/snes/tutorials/output/ex12_2d_p2_neumann_0.out /petsc/src/snes/tutorials/output/ex12_2d_p2_neumann_1.out /petsc/src/snes/tutorials/output/ex12_3d_p1_neumann_0.out /petsc/src/ts/tutorials/output/ex11_glvis_adv_2d_tet.out
df93260f	26-Jul-2022	Matthew G. Knepley <knepley@gmail.com>	Plex: Straighten out Gmsh labels - Added documentation - Removed -dm_plex_gmsh_use_marker in favor of -dm_plex_boundary_label - Added -dm_plex_gmsh_multiple_val plexgmsh.c
90d778b8	27-Jul-2022	Lisandro Dalcin <dalcinl@gmail.com>	DMPLEX: Update Gmsh reader to store entity dimension of regions plexgmsh.c
5cab5458	26-Jul-2022	Satish Balay <balay@mcs.anl.gov>	Merge branch 'barry/2022-07-23/add-petscbeginuser' into 'main' Add PetscFunctionBeginUser to all PETSc C/C++ examples See merge request petsc/petsc!5470 /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/packages/slepc.py /petsc/doc/docs/changes/dev.rst /petsc/doc/docs/manual/mat.rst /petsc/doc/faq/index.rst /petsc/include/petsc/private/matimpl.h /petsc/include/petscdevice.h /petsc/include/petscerror.h /petsc/include/petscmat.h /petsc/src/binding/petsc4py/src/PETSc/Mat.pyx /petsc/src/binding/petsc4py/src/PETSc/petscmat.pxi /petsc/src/binding/petsc4py/test/test_mat_py.py /petsc/src/dm/dt/dualspace/impls/lagrange/tests/ex1.c /petsc/src/dm/dt/dualspace/impls/lagrange/tutorials/ex1.c /petsc/src/dm/dt/dualspace/tests/ex1.c /petsc/src/dm/dt/fe/tests/ex1.c /petsc/src/dm/dt/fe/tests/ex2.c /petsc/src/dm/dt/fe/tests/ex3.c /petsc/src/dm/dt/space/impls/ptrimmed/tests/ex1.c /petsc/src/dm/dt/space/impls/sum/spacesum.c /petsc/src/dm/dt/tests/ex1.c /petsc/src/dm/dt/tests/ex10.c /petsc/src/dm/dt/tests/ex11.c /petsc/src/dm/dt/tests/ex12.c /petsc/src/dm/dt/tests/ex13.c /petsc/src/dm/dt/tests/ex14.c /petsc/src/dm/dt/tests/ex2.c /petsc/src/dm/dt/tests/ex3.c /petsc/src/dm/dt/tests/ex4.c /petsc/src/dm/dt/tests/ex5.c /petsc/src/dm/dt/tests/ex6.c /petsc/src/dm/dt/tests/ex7.c /petsc/src/dm/dt/tests/ex8.c /petsc/src/dm/dt/tests/ex9.c /petsc/src/dm/field/tutorials/ex1.c /petsc/src/dm/impls/composite/tests/ex1.c /petsc/src/dm/impls/forest/p4est/tests/ex1.c /petsc/src/dm/impls/forest/tests/ex1.c /petsc/src/dm/impls/forest/tests/ex2.c /petsc/src/dm/impls/forest/tests/ex3.c /petsc/src/dm/impls/forest/tutorials/ex1.c /petsc/src/dm/impls/moab/dmmbfem.cxx /petsc/src/dm/impls/moab/tests/ex1.cxx /petsc/src/dm/impls/moab/tests/ex2.cxx /petsc/src/dm/impls/moab/tests/ex3.cxx /petsc/src/dm/impls/network/tests/ex1.c /petsc/src/dm/impls/patch/tests/ex1.c tests/ex1.c tests/ex10.c tests/ex11.c tests/ex12.c tests/ex13.c tests/ex14.c tests/ex15.c tests/ex16.c tests/ex17.c tests/ex18.c tests/ex19.c tests/ex20.c tests/ex21.c tests/ex22.c tests/ex23.c tests/ex24.c tests/ex25.c tests/ex26.c tests/ex27.c tests/ex28.c tests/ex29.c tests/ex3.c tests/ex30.c tests/ex31.c tests/ex32.c tests/ex33.c tests/ex34.c tests/ex35.c tests/ex36.c tests/ex37.c tests/ex38.c tests/ex39.c tests/ex4.c tests/ex40.c tests/ex41.c tests/ex42.c tests/ex44.c tests/ex45.c tests/ex46.c tests/ex47.c tests/ex49.c tests/ex5.c tests/ex50.c tests/ex55.c tests/ex56.c tests/ex6.c tests/ex60.c tests/ex61.c tests/ex7.c tests/ex8.c tests/ex9.c tests/ex99.c tutorials/ex1.c tutorials/ex10.c tutorials/ex11.c tutorials/ex13.c tutorials/ex14.c tutorials/ex5.c tutorials/ex6.c tutorials/ex7.c tutorials/ex8.c tutorials/ex9.c /petsc/src/dm/impls/stag/tests/ex1.c /petsc/src/dm/impls/stag/tests/ex10.c /petsc/src/dm/impls/stag/tests/ex11.c /petsc/src/dm/impls/stag/tests/ex12.c /petsc/src/dm/impls/stag/tests/ex13.c /petsc/src/dm/impls/stag/tests/ex14.c 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/petsc/src/vec/vec/tests/ex40.c /petsc/src/vec/vec/tests/ex41.c /petsc/src/vec/vec/tests/ex42.c /petsc/src/vec/vec/tests/ex43.c /petsc/src/vec/vec/tests/ex44.c /petsc/src/vec/vec/tests/ex45.c /petsc/src/vec/vec/tests/ex46.c /petsc/src/vec/vec/tests/ex47.c /petsc/src/vec/vec/tests/ex48.c /petsc/src/vec/vec/tests/ex49.c /petsc/src/vec/vec/tests/ex5.c /petsc/src/vec/vec/tests/ex50.c /petsc/src/vec/vec/tests/ex51.c /petsc/src/vec/vec/tests/ex55.c /petsc/src/vec/vec/tests/ex56.c /petsc/src/vec/vec/tests/ex57.cxx /petsc/src/vec/vec/tests/ex58.c /petsc/src/vec/vec/tests/ex59.cxx /petsc/src/vec/vec/tests/ex6.c /petsc/src/vec/vec/tests/ex60.c /petsc/src/vec/vec/tests/ex61.c /petsc/src/vec/vec/tests/ex7.c /petsc/src/vec/vec/tests/ex8.c /petsc/src/vec/vec/tests/ex9.c /petsc/src/vec/vec/tutorials/ex1.c /petsc/src/vec/vec/tutorials/ex10.c /petsc/src/vec/vec/tutorials/ex11.c /petsc/src/vec/vec/tutorials/ex12.c /petsc/src/vec/vec/tutorials/ex15.c /petsc/src/vec/vec/tutorials/ex16.c /petsc/src/vec/vec/tutorials/ex18.c /petsc/src/vec/vec/tutorials/ex19.c /petsc/src/vec/vec/tutorials/ex2.c /petsc/src/vec/vec/tutorials/ex3.c /petsc/src/vec/vec/tutorials/ex31.c /petsc/src/vec/vec/tutorials/ex42.c /petsc/src/vec/vec/tutorials/ex42a.c /petsc/src/vec/vec/tutorials/ex44.c /petsc/src/vec/vec/tutorials/ex5.c /petsc/src/vec/vec/tutorials/ex6.c /petsc/src/vec/vec/tutorials/ex7.c /petsc/src/vec/vec/tutorials/ex8.c /petsc/src/vec/vec/tutorials/ex9.c /petsc/src/vec/vec/tutorials/performance.c /petsc/src/vec/vec/utils/tagger/tutorials/ex1.c
1c8afea9	26-Jul-2022	Matthew G. Knepley <knepley@gmail.com>	Plex: Complete the label from -dm_plex_boundary_label /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/packages/slepc.py /petsc/doc/docs/changes/dev.rst /petsc/doc/docs/manual/mat.rst /petsc/doc/faq/index.rst /petsc/include/petsc/private/matimpl.h /petsc/include/petscdevice.h /petsc/include/petscerror.h /petsc/include/petscmat.h /petsc/src/binding/petsc4py/src/PETSc/Mat.pyx /petsc/src/binding/petsc4py/src/PETSc/petscmat.pxi /petsc/src/binding/petsc4py/test/test_mat_py.py plexcreate.c /petsc/src/ksp/ksp/tutorials/ex82.c /petsc/src/ksp/pc/impls/bddc/bddcprivate.c /petsc/src/mat/impls/adj/mpi/mpiadj.c /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/mpi/mpimatmatmult.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/aij.h /petsc/src/mat/impls/aij/seq/kokkos/aijkok.kokkos.cxx /petsc/src/mat/impls/aij/seq/matmatmult.c /petsc/src/mat/impls/aij/seq/matptap.c /petsc/src/mat/impls/aij/seq/matrart.c /petsc/src/mat/impls/aij/seq/symtranspose.c /petsc/src/mat/impls/baij/mpi/mpibaij.c /petsc/src/mat/impls/baij/seq/baij.c /petsc/src/mat/impls/blockmat/seq/blockmat.c /petsc/src/mat/impls/composite/mcomposite.c /petsc/src/mat/impls/dense/mpi/mpidense.c /petsc/src/mat/impls/dense/seq/dense.c /petsc/src/mat/impls/elemental/matelem.cxx /petsc/src/mat/impls/htool/htool.cxx /petsc/src/mat/impls/htool/htool.hpp /petsc/src/mat/impls/is/matis.c /petsc/src/mat/impls/nest/matnest.c /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c /petsc/src/mat/impls/sbaij/seq/sbaij.c /petsc/src/mat/impls/scalapack/matscalapack.c /petsc/src/mat/impls/scatter/mscatter.c /petsc/src/mat/impls/sell/mpi/mpisell.c /petsc/src/mat/impls/sell/seq/sell.c /petsc/src/mat/impls/shell/shell.c /petsc/src/mat/interface/matproduct.c /petsc/src/mat/interface/matrix.c /petsc/src/mat/tests/ex179.c /petsc/src/mat/tests/output/ex179_1.out /petsc/src/sys/objects/inherit.c /petsc/src/sys/objects/kokkos/kinit.kokkos.cxx /petsc/src/tao/constrained/impls/ipm/pdipm.c /petsc/src/tao/matrix/adamat.c /petsc/src/ts/tutorials/ex53.c /petsc/src/ts/tutorials/output/ex53_2d_mandel_sconv.out
197f6770	23-Jul-2022	Jed Brown <jed@jedbrown.org>	DMPlex Exodus: fix %d/PetscInt_FMT for 64-bit indices /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/doc/classic/doctext/myst.def /petsc/doc/docs/changes/dev.rst /petsc/include/petsc/private/dmnetworkimpl.h /petsc/include/petscdmnetwork.h /petsc/include/petscpc.h /petsc/include/petscviewerhdf5.h /petsc/share/petsc/datafiles/matrices/ritz2 /petsc/share/petsc/datafiles/matrices/ritz5 /petsc/src/dm/impls/network/makefile /petsc/src/dm/impls/network/network.c /petsc/src/dm/impls/network/networkcreate.c /petsc/src/dm/impls/network/tests/ex1.c /petsc/src/dm/impls/network/tests/makefile /petsc/src/dm/impls/network/tests/output/ex1_0.out /petsc/src/dm/impls/network/tests/output/ex1_1.out plexexodusii.c /petsc/src/ksp/ksp/impls/gmres/gmreig.c /petsc/src/ksp/ksp/impls/gmres/gmres.c /petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/ksp/ksp/tests/ex82.c /petsc/src/ksp/ksp/tests/output/ex82_1.out /petsc/src/ksp/ksp/tests/output/ex82_2.out /petsc/src/ksp/ksp/tests/output/ex82_harmonic.out /petsc/src/ksp/pc/impls/hypre/hypre.c /petsc/src/mat/impls/aij/mpi/mkl_cpardiso/mkl_cpardiso.c /petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c
327415f7	23-Jul-2022	Barry Smith <bsmith@mcs.anl.gov>	Add PetscFunctionBeginUser to all PETSc C/C++ examples Now the stack frames will contain the main program and the correct line numbers in them git ls-files \| egrep "(tutorials\|tests)" \| xargs sed - Add PetscFunctionBeginUser to all PETSc C/C++ examples Now the stack frames will contain the main program and the correct line numbers in them git ls-files \| egrep "(tutorials\|tests)" \| xargs sed -i "s?\(PetscCall(PetscInitialize(&argc\)?PetscFunctionBeginUser;\n \1?g" Commit-type: error-checking, testing-fix /spend 15m show more ... /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/doc/classic/doctext/myst.def /petsc/doc/docs/changes/dev.rst /petsc/include/petsc/private/dmnetworkimpl.h /petsc/include/petscdmnetwork.h /petsc/include/petscpc.h /petsc/include/petscviewerhdf5.h /petsc/share/petsc/datafiles/matrices/ritz2 /petsc/share/petsc/datafiles/matrices/ritz5 /petsc/src/dm/dt/dualspace/impls/lagrange/tests/ex1.c /petsc/src/dm/dt/dualspace/impls/lagrange/tutorials/ex1.c /petsc/src/dm/dt/dualspace/tests/ex1.c /petsc/src/dm/dt/fe/tests/ex1.c /petsc/src/dm/dt/fe/tests/ex2.c /petsc/src/dm/dt/fe/tests/ex3.c /petsc/src/dm/dt/space/impls/ptrimmed/tests/ex1.c /petsc/src/dm/dt/tests/ex1.c /petsc/src/dm/dt/tests/ex10.c /petsc/src/dm/dt/tests/ex11.c /petsc/src/dm/dt/tests/ex12.c /petsc/src/dm/dt/tests/ex13.c /petsc/src/dm/dt/tests/ex14.c /petsc/src/dm/dt/tests/ex2.c /petsc/src/dm/dt/tests/ex3.c /petsc/src/dm/dt/tests/ex4.c /petsc/src/dm/dt/tests/ex5.c /petsc/src/dm/dt/tests/ex6.c /petsc/src/dm/dt/tests/ex7.c /petsc/src/dm/dt/tests/ex8.c /petsc/src/dm/dt/tests/ex9.c /petsc/src/dm/field/tutorials/ex1.c /petsc/src/dm/impls/composite/tests/ex1.c /petsc/src/dm/impls/forest/p4est/tests/ex1.c /petsc/src/dm/impls/forest/tests/ex1.c /petsc/src/dm/impls/forest/tests/ex2.c /petsc/src/dm/impls/forest/tests/ex3.c /petsc/src/dm/impls/forest/tutorials/ex1.c /petsc/src/dm/impls/moab/tests/ex1.cxx /petsc/src/dm/impls/moab/tests/ex2.cxx /petsc/src/dm/impls/moab/tests/ex3.cxx /petsc/src/dm/impls/network/makefile /petsc/src/dm/impls/network/network.c /petsc/src/dm/impls/network/networkcreate.c /petsc/src/dm/impls/network/tests/ex1.c /petsc/src/dm/impls/network/tests/makefile /petsc/src/dm/impls/network/tests/output/ex1_0.out /petsc/src/dm/impls/network/tests/output/ex1_1.out /petsc/src/dm/impls/patch/tests/ex1.c tests/ex1.c tests/ex10.c tests/ex11.c tests/ex12.c tests/ex13.c tests/ex14.c tests/ex15.c tests/ex16.c tests/ex17.c tests/ex18.c tests/ex19.c tests/ex20.c tests/ex21.c tests/ex22.c tests/ex23.c tests/ex24.c tests/ex25.c tests/ex26.c tests/ex27.c tests/ex28.c tests/ex29.c tests/ex3.c tests/ex30.c tests/ex31.c tests/ex32.c tests/ex33.c tests/ex34.c tests/ex35.c tests/ex36.c tests/ex37.c tests/ex38.c tests/ex39.c tests/ex4.c tests/ex40.c tests/ex41.c tests/ex42.c tests/ex44.c tests/ex45.c tests/ex46.c tests/ex47.c tests/ex49.c tests/ex5.c tests/ex50.c tests/ex55.c tests/ex56.c tests/ex6.c tests/ex60.c tests/ex61.c tests/ex7.c tests/ex8.c tests/ex9.c tests/ex99.c tutorials/ex1.c tutorials/ex10.c tutorials/ex11.c tutorials/ex13.c tutorials/ex14.c tutorials/ex5.c tutorials/ex6.c tutorials/ex7.c tutorials/ex8.c tutorials/ex9.c /petsc/src/dm/impls/stag/tests/ex1.c /petsc/src/dm/impls/stag/tests/ex10.c /petsc/src/dm/impls/stag/tests/ex11.c /petsc/src/dm/impls/stag/tests/ex12.c /petsc/src/dm/impls/stag/tests/ex13.c /petsc/src/dm/impls/stag/tests/ex14.c /petsc/src/dm/impls/stag/tests/ex15.c /petsc/src/dm/impls/stag/tests/ex16.c /petsc/src/dm/impls/stag/tests/ex17.c /petsc/src/dm/impls/stag/tests/ex18.c /petsc/src/dm/impls/stag/tests/ex19.c /petsc/src/dm/impls/stag/tests/ex2.c /petsc/src/dm/impls/stag/tests/ex20.c /petsc/src/dm/impls/stag/tests/ex23.c /petsc/src/dm/impls/stag/tests/ex3.c /petsc/src/dm/impls/stag/tests/ex30.c /petsc/src/dm/impls/stag/tests/ex32.c /petsc/src/dm/impls/stag/tests/ex4.c /petsc/src/dm/impls/stag/tests/ex40.c /petsc/src/dm/impls/stag/tests/ex41.c /petsc/src/dm/impls/stag/tests/ex42.c /petsc/src/dm/impls/stag/tests/ex43.c /petsc/src/dm/impls/stag/tests/ex5.c /petsc/src/dm/impls/stag/tests/ex50.c /petsc/src/dm/impls/stag/tests/ex51.c /petsc/src/dm/impls/stag/tests/ex6.c /petsc/src/dm/impls/stag/tests/ex7.c /petsc/src/dm/impls/stag/tests/ex8.c /petsc/src/dm/impls/stag/tests/ex9.c /petsc/src/dm/impls/stag/tutorials/ex1.c /petsc/src/dm/impls/stag/tutorials/ex2.c /petsc/src/dm/impls/stag/tutorials/ex3.c /petsc/src/dm/impls/stag/tutorials/ex4.c /petsc/src/dm/impls/stag/tutorials/ex6.c /petsc/src/dm/impls/stag/tutorials/ex8.c /petsc/src/dm/impls/swarm/tests/ex1.c /petsc/src/dm/impls/swarm/tests/ex2.c /petsc/src/dm/impls/swarm/tests/ex3.c /petsc/src/dm/impls/swarm/tests/ex4.c /petsc/src/dm/impls/swarm/tests/ex5.c /petsc/src/dm/impls/swarm/tests/ex7.c /petsc/src/dm/impls/swarm/tests/ex8.c /petsc/src/dm/impls/swarm/tutorials/ex1.c /petsc/src/dm/label/tutorials/ex1.c /petsc/src/dm/partitioner/tests/ex33.c /petsc/src/dm/tests/ex1.c /petsc/src/dm/tests/ex10.c /petsc/src/dm/tests/ex11.c /petsc/src/dm/tests/ex12.c /petsc/src/dm/tests/ex13.c /petsc/src/dm/tests/ex14.c /petsc/src/dm/tests/ex15.c /petsc/src/dm/tests/ex16.c /petsc/src/dm/tests/ex19.c /petsc/src/dm/tests/ex1k.kokkos.cxx /petsc/src/dm/tests/ex2.c /petsc/src/dm/tests/ex20.c /petsc/src/dm/tests/ex21.c /petsc/src/dm/tests/ex22.c /petsc/src/dm/tests/ex23.c /petsc/src/dm/tests/ex24.c /petsc/src/dm/tests/ex25.c /petsc/src/dm/tests/ex26.c /petsc/src/dm/tests/ex27.c /petsc/src/dm/tests/ex28.c /petsc/src/dm/tests/ex2k.kokkos.cxx /petsc/src/dm/tests/ex3.c /petsc/src/dm/tests/ex30.c /petsc/src/dm/tests/ex31.c /petsc/src/dm/tests/ex32.c /petsc/src/dm/tests/ex33.c /petsc/src/dm/tests/ex34.c /petsc/src/dm/tests/ex35.c /petsc/src/dm/tests/ex36.c /petsc/src/dm/tests/ex37.c /petsc/src/dm/tests/ex38.c /petsc/src/dm/tests/ex39.c /petsc/src/dm/tests/ex4.c /petsc/src/dm/tests/ex40.c /petsc/src/dm/tests/ex41.c /petsc/src/dm/tests/ex42.c /petsc/src/dm/tests/ex43.c /petsc/src/dm/tests/ex44.c /petsc/src/dm/tests/ex45.c /petsc/src/dm/tests/ex46.c /petsc/src/dm/tests/ex47.c /petsc/src/dm/tests/ex48.c /petsc/src/dm/tests/ex49.c /petsc/src/dm/tests/ex5.c /petsc/src/dm/tests/ex50.c /petsc/src/dm/tests/ex51.c /petsc/src/dm/tests/ex52.c /petsc/src/dm/tests/ex53.c /petsc/src/dm/tests/ex6.c /petsc/src/dm/tests/ex7.c /petsc/src/dm/tests/ex8.c /petsc/src/dm/tests/ex9.c /petsc/src/dm/tutorials/ex1.c /petsc/src/dm/tutorials/ex10.c /petsc/src/dm/tutorials/ex12.c /petsc/src/dm/tutorials/ex14.c /petsc/src/dm/tutorials/ex15.c /petsc/src/dm/tutorials/ex19.c /petsc/src/dm/tutorials/ex2.c /petsc/src/dm/tutorials/ex20.c /petsc/src/dm/tutorials/ex21.c /petsc/src/dm/tutorials/ex22.c /petsc/src/dm/tutorials/ex25.c /petsc/src/dm/tutorials/ex26.c /petsc/src/dm/tutorials/ex3.c /petsc/src/dm/tutorials/ex4.c /petsc/src/dm/tutorials/ex5.c /petsc/src/dm/tutorials/ex51.c 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/petsc/src/vec/vec/tutorials/ex5.c /petsc/src/vec/vec/tutorials/ex6.c /petsc/src/vec/vec/tutorials/ex7.c /petsc/src/vec/vec/tutorials/ex8.c /petsc/src/vec/vec/tutorials/ex9.c /petsc/src/vec/vec/tutorials/performance.c /petsc/src/vec/vec/utils/tagger/tutorials/ex1.c
99a026b9	20-Jul-2022	Alexis Marboeuf <marboeua@mcmaster.ca>	Plex: bug fix in DMPlexCreateGlobalToNaturalSF in presence of constraint dofs The creation of the natural SF raises an error when the section includes constraint dofs. Leaves have duplicate entries. Plex: bug fix in DMPlexCreateGlobalToNaturalSF in presence of constraint dofs The creation of the natural SF raises an error when the section includes constraint dofs. Leaves have duplicate entries. Now the natural SF includes the constraint dofs. show more ... /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/doc/classic/doctext/myst.def /petsc/doc/docs/changes/dev.rst /petsc/include/petsc/private/dmnetworkimpl.h /petsc/include/petscdmnetwork.h /petsc/include/petscpc.h /petsc/include/petscviewerhdf5.h /petsc/share/petsc/datafiles/matrices/ritz2 /petsc/share/petsc/datafiles/matrices/ritz5 /petsc/src/dm/impls/network/makefile /petsc/src/dm/impls/network/network.c /petsc/src/dm/impls/network/networkcreate.c /petsc/src/dm/impls/network/tests/ex1.c /petsc/src/dm/impls/network/tests/makefile /petsc/src/dm/impls/network/tests/output/ex1_0.out /petsc/src/dm/impls/network/tests/output/ex1_1.out plexnatural.c /petsc/src/ksp/ksp/impls/gmres/gmreig.c /petsc/src/ksp/ksp/impls/gmres/gmres.c /petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/ksp/ksp/tests/ex82.c /petsc/src/ksp/ksp/tests/output/ex82_1.out /petsc/src/ksp/ksp/tests/output/ex82_2.out /petsc/src/ksp/ksp/tests/output/ex82_harmonic.out /petsc/src/ksp/pc/impls/hypre/hypre.c /petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c
8ba16be8	11-Apr-2022	Jed Brown <jed@jedbrown.org>	DMPlex: test for DMProjectCoordinates when coordinates are localized The output is the same with and without the projection. /petsc/config/BuildSystem/config/framework.py /petsc/include/petsclandau.h /petsc/include/petscpctypes.h /petsc/src/dm/impls/da/hypre/mhyp.c tutorials/ex8.c tutorials/output/ex8_3d_q1_periodic_project.out /petsc/src/dm/impls/stag/tutorials/ex4.c /petsc/src/ksp/ksp/tutorials/ex34.c /petsc/src/ksp/ksp/tutorials/output/ex34_hyprestruct.out /petsc/src/ksp/pc/impls/bjacobi/bjkokkos/bjkokkos.kokkos.cxx /petsc/src/ksp/pc/impls/gamg/geo.c /petsc/src/ksp/pc/impls/hypre/hypre.c /petsc/src/ksp/pc/interface/pcregis.c /petsc/src/ts/utils/dmplexlandau/plexland.c /petsc/src/ts/utils/dmplexlandau/tutorials/ex1.c /petsc/src/ts/utils/dmplexlandau/tutorials/output/ex1_0.out /petsc/src/ts/utils/dmplexlandau/tutorials/output/ex1_0_alt.out /petsc/src/ts/utils/dmplexlandau/tutorials/output/ex1_0_alt_2.out
f5867de0	21-Jul-2022	Matthew G. Knepley <knepley@gmail.com>	Plex: Grid hash can find particle, but no cell is covering the box - Added better debugging /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/doc/docs/changes/dev.rst /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petsc/private/petscscalapack.h /petsc/include/petsc/private/tsimpl.h /petsc/include/petscdevice.h /petsc/include/petscmat.h /petsc/include/petsctao.h /petsc/lib/petsc/conf/rules /petsc/makefile /petsc/src/binding/petsc4py/src/PETSc/Sys.pyx /petsc/src/binding/petsc4py/src/PETSc/petscdef.pxi /petsc/src/binding/petsc4py/src/PETSc/petscsys.pxi /petsc/src/dm/impls/network/network.c plexcreate.c plexgeometry.c /petsc/src/mat/impls/aij/mpi/kokkos/mpiaijkok.kokkos.cxx /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/mpi/mpiaij.h /petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/aij.h /petsc/src/mat/impls/aij/seq/kokkos/aijkok.kokkos.cxx /petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu /petsc/src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h /petsc/src/mat/impls/hypre/mhypre.c /petsc/src/mat/impls/is/matis.c /petsc/src/mat/impls/scalapack/matscalapack.c /petsc/src/mat/tests/ex123.c /petsc/src/mat/tests/ex254.c /petsc/src/mat/utils/gcreate.c /petsc/src/snes/tutorials/build.zig /petsc/src/snes/tutorials/ex1z.zig /petsc/src/sys/error/fp.c /petsc/src/sys/logging/plog.c /petsc/src/tao/interface/dlregistao.c /petsc/src/tao/interface/fdiff.c /petsc/src/tao/interface/taosolver.c /petsc/src/tao/interface/taosolver_bounds.c /petsc/src/tao/interface/taosolver_fg.c /petsc/src/tao/interface/taosolver_hj.c /petsc/src/tao/interface/taosolverregi.c /petsc/src/ts/adapt/interface/tsadapt.c /petsc/src/ts/interface/ts.c /petsc/src/ts/tests/ex29.c /petsc/src/ts/tests/output/ex29_1.out /petsc/src/ts/tests/output/ex29_2.out /petsc/src/vec/is/utils/pmap.c
7136b68b	20-Jul-2022	Jed Brown <jed@jedbrown.org>	DMPlex HDF5: fix integer format strings plexhdf5.c
eefd97a2	20-Jul-2022	Jed Brown <jed@jedbrown.org>	DMPlex: improve output for inspecting elements and their nodal coordinates tests/ex49.c
5f34f2dc	20-Jul-2022	Jed Brown <jed@jedbrown.org>	DMPlex: add support for writing CGNS files in parallel Also --download-cgns. This supports most kinds of quadratic and cubic elements, plus some quartic (not supported in Paraview-5.10.1). Parallel DMPlex: add support for writing CGNS files in parallel Also --download-cgns. This supports most kinds of quadratic and cubic elements, plus some quartic (not supported in Paraview-5.10.1). Parallel IO uses collective contiguous writes. show more ... /petsc/config/BuildSystem/config/packages/cgns.py /petsc/config/examples/arch-ci-linux-gcc-pkgs-opt.py /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petsc/private/viewercgnsimpl.h /petsc/include/petscviewer.h cgns/makefile cgns/plexcgns2.c makefile plex.c plexcgns.c /petsc/src/snes/tutorials/ex26.c /petsc/src/snes/tutorials/output/ex26_2d_q3_cgns.out /petsc/src/sys/classes/viewer/impls/cgns/cgnsv.c /petsc/src/sys/classes/viewer/impls/cgns/makefile /petsc/src/sys/classes/viewer/impls/makefile /petsc/src/sys/classes/viewer/interface/viewregall.c
966484cf	17-Jul-2022	Jed Brown <jed@jedbrown.org>	DMPlexCreatePointNumbering: add test and better documentation /petsc/.gitlab-ci.yml /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/packages/AMReX.py /petsc/config/BuildSystem/config/packages/MFEM.py /petsc/config/BuildSystem/config/packages/bamg.py /petsc/config/BuildSystem/config/packages/libmesh.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/BuildSystem/config/packages/slepc.py /petsc/config/example_template.py /petsc/doc/docs/changes/dev.rst /petsc/include/petsc/private/vecimpl.h /petsc/include/petscblaslapack.h /petsc/include/petscerror.h /petsc/include/petscsys.h /petsc/include/petscvec.h /petsc/src/dm/dt/fe/tests/ex1.c /petsc/src/dm/dt/fv/interface/fv.c /petsc/src/dm/dt/tests/ex11.c /petsc/src/dm/impls/forest/p4est/pforest.h plex.c tests/ex50.c tests/output/ex50_1.out /petsc/src/dm/tests/ex46.c /petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/ksp/pc/impls/hypre/hypre.c /petsc/src/ksp/pc/impls/ml/ml.c /petsc/src/ksp/pc/impls/shell/shellpc.c /petsc/src/mat/impls/aij/mpi/strumpack/strumpack.c /petsc/src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c /petsc/src/mat/impls/aij/seq/superlu/superlu.c /petsc/src/mat/impls/hypre/mhypre.c /petsc/src/snes/interface/snes.c /petsc/src/snes/tutorials/ex19.c /petsc/src/snes/tutorials/output/ex19_failure_size.out /petsc/src/sys/error/err.c /petsc/src/sys/error/errtrace.c /petsc/src/sys/error/pstack.c /petsc/src/sys/error/signal.c /petsc/src/sys/objects/init.c /petsc/src/sys/objects/options.c /petsc/src/sys/objects/pinit.c /petsc/src/sys/tests/ex32.c /petsc/src/sys/tests/ex33.c /petsc/src/sys/tests/ex47.c /petsc/src/sys/tests/ex47f.F90 /petsc/src/sys/tests/ex48f90.F90 /petsc/src/sys/tests/ex5.c /petsc/src/sys/tests/ex54.c /petsc/src/sys/tests/options/ex55.c /petsc/src/sys/tests/output/ex54_0.out /petsc/src/sys/tests/output/ex54_1_options_file-ex54options_1h.out /petsc/src/sys/tests/output/ex5_debug.out /petsc/src/sys/tests/output/ex5_opt.out /petsc/src/sys/tutorials/ex16.c /petsc/src/sys/tutorials/ex16f.F90 /petsc/src/sys/tutorials/ex19.c /petsc/src/sys/tutorials/ex5.c /petsc/src/sys/utils/str.c /petsc/src/ts/interface/ts.c /petsc/src/ts/tutorials/multirate/ex4.c /petsc/src/vec/is/sf/interface/vscat.c /petsc/src/vec/vec/interface/rvector.c
c3ecd002	20-Jul-2022	Matthew G. Knepley <knepley@gmail.com>	Plex ex1: Periodic latex - It is not perfect, but getting there tests/ex1.c tests/output/ex1_box_2d_latex_xper.out
c713ec31	20-Jul-2022	Matthew G. Knepley <knepley@gmail.com>	Plex: Fix latex viewer for periodicity /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/doc/docs/changes/dev.rst /petsc/include/petsc/private/petscscalapack.h /petsc/include/petsc/private/tsimpl.h /petsc/include/petscdevice.h /petsc/include/petscmat.h /petsc/include/petsctao.h /petsc/lib/petsc/conf/rules /petsc/makefile /petsc/src/binding/petsc4py/src/PETSc/Sys.pyx /petsc/src/binding/petsc4py/src/PETSc/petscdef.pxi /petsc/src/binding/petsc4py/src/PETSc/petscsys.pxi /petsc/src/dm/impls/network/network.c plex.c /petsc/src/mat/impls/aij/mpi/kokkos/mpiaijkok.kokkos.cxx /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/mpi/mpiaij.h /petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/aij.h /petsc/src/mat/impls/aij/seq/kokkos/aijkok.kokkos.cxx /petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu /petsc/src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h /petsc/src/mat/impls/hypre/mhypre.c /petsc/src/mat/impls/is/matis.c /petsc/src/mat/impls/scalapack/matscalapack.c /petsc/src/mat/tests/ex123.c /petsc/src/mat/tests/ex254.c /petsc/src/mat/utils/gcreate.c /petsc/src/snes/tutorials/build.zig /petsc/src/snes/tutorials/ex1z.zig /petsc/src/sys/error/fp.c /petsc/src/sys/logging/plog.c /petsc/src/tao/interface/dlregistao.c /petsc/src/tao/interface/fdiff.c /petsc/src/tao/interface/taosolver.c /petsc/src/tao/interface/taosolver_bounds.c /petsc/src/tao/interface/taosolver_fg.c /petsc/src/tao/interface/taosolver_hj.c /petsc/src/tao/interface/taosolverregi.c /petsc/src/ts/adapt/interface/tsadapt.c /petsc/src/ts/interface/ts.c /petsc/src/ts/tests/ex29.c /petsc/src/ts/tests/output/ex29_1.out /petsc/src/ts/tests/output/ex29_2.out /petsc/src/vec/is/utils/pmap.c
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