plex - OpenGrok history log for /petsc/src/dm/impls/plex

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d8185827	07-Apr-2021	Barry Smith <bsmith@mcs.anl.gov>	Fix code that did not pass appropriate PETSc error flags to SETERRQ() Add checkbadSource check for use of SETERRQ() without an appropriate error flag Commit-type: error-checking, bug-fix, testing-f Fix code that did not pass appropriate PETSc error flags to SETERRQ() Add checkbadSource check for use of SETERRQ() without an appropriate error flag Commit-type: error-checking, bug-fix, testing-fix, style-fix /spend 2.5h show more ... /petsc/config/BuildSystem/config/framework.py /petsc/include/petscerror.h /petsc/lib/petsc/conf/rules /petsc/src/dm/dt/space/impls/sum/spacesum.c plexegads.c /petsc/src/dm/tests/ex30.c /petsc/src/docs/tex/petsc.bib /petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c /petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/ksp/ksp/tests/ex17.c /petsc/src/ksp/ksp/tests/ex32.c /petsc/src/ksp/ksp/tutorials/ex52.c /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/mpi/mpiov.c /petsc/src/mat/impls/scalapack/matscalapack.c /petsc/src/mat/tests/ex129.c /petsc/src/mat/tests/ex220.c /petsc/src/mat/tests/ex242.c /petsc/src/mat/tests/ex30.c /petsc/src/mat/tests/ex47.c /petsc/src/mat/tests/ex53.c /petsc/src/mat/tests/ex62.c /petsc/src/mat/tests/ex82.c /petsc/src/mat/tests/ex83.c /petsc/src/mat/tests/ex91.c /petsc/src/mat/tests/ex92.c /petsc/src/snes/tests/ex17.c /petsc/src/snes/tutorials/ex10d/ex10.c /petsc/src/snes/tutorials/ex5.c /petsc/src/snes/tutorials/network/water/water.c /petsc/src/snes/tutorials/network/water/waterreaddata.c /petsc/src/sys/error/err.c /petsc/src/sys/error/errtrace.c /petsc/src/sys/error/signal.c /petsc/src/sys/fileio/ftest.c /petsc/src/sys/python/pythonsys.c /petsc/src/tao/bound/utils/isutil.c /petsc/src/tao/constrained/tutorials/ex1.c /petsc/src/tao/constrained/tutorials/maros.c /petsc/src/tao/constrained/tutorials/tomographyADMM.c /petsc/src/tao/interface/taosolver.c /petsc/src/tao/leastsquares/impls/pounders/pounders.c /petsc/src/tao/pde_constrained/impls/lcl/lcl.c /petsc/src/ts/interface/tsmon.c /petsc/src/ts/tutorials/ex8.c /petsc/src/ts/tutorials/ex9.c /petsc/src/ts/tutorials/multirate/ex5.c /petsc/src/ts/tutorials/multirate/ex6.c /petsc/src/ts/tutorials/multirate/ex7.c /petsc/src/ts/tutorials/multirate/ex8.c /petsc/src/ts/tutorials/multirate/finitevolume1d.c /petsc/src/ts/tutorials/network/wash/pipeInterface.c /petsc/src/ts/tutorials/power_grid/stability_9bus/ex9busdmnetwork.c
678e61f4	12-Apr-2021	Satish Balay <balay@mcs.anl.gov>	Merge remote-tracking branch 'origin/release' /petsc/include/petsc/finclude/petscmat.h /petsc/include/petsc/private/viewerhdf5impl.h /petsc/include/petscblaslapack.h /petsc/include/petsccublas.h /petsc/include/petscerror.h /petsc/include/petscmat.h /petsc/include/petscsys.h /petsc/setup.py ftn-custom/zplexcreate.c plexfem.c plexsubmesh.c /petsc/src/dm/impls/stag/stagutils.c /petsc/src/docs/sphinx_docs/install/install_documentation.rst /petsc/src/ksp/pc/interface/precon.c /petsc/src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h /petsc/src/mat/interface/matrix.c /petsc/src/snes/impls/qn/qn.c /petsc/src/sys/classes/viewer/interface/viewreg.c /petsc/src/sys/classes/viewer/interface/viewregall.c /petsc/src/sys/error/err.c /petsc/src/tao/interface/taosolver.c /petsc/src/ts/adapt/impls/none/adaptnone.c /petsc/src/vec/is/is/interface/index.c
446c23c1	11-Apr-2021	Pierre Jolivet <pierre@joliv.et>	Documentation fixes /petsc/include/petsc/private/viewerhdf5impl.h /petsc/include/petscmat.h /petsc/setup.py plexfem.c plexsubmesh.c /petsc/src/dm/impls/stag/stagutils.c /petsc/src/mat/interface/matrix.c /petsc/src/snes/impls/qn/qn.c /petsc/src/sys/classes/viewer/interface/viewreg.c /petsc/src/sys/classes/viewer/interface/viewregall.c /petsc/src/tao/interface/taosolver.c /petsc/src/ts/adapt/impls/none/adaptnone.c /petsc/src/vec/is/is/interface/index.c
45480ffe	06-Apr-2021	Matthew G. Knepley <knepley@gmail.com>	DM+Plex: Boundary integration functions are now stored in a PetscWeakForm held in the Boundary object - Boundary residual/Jacobian functions now take a form key - Now store DMLabel in DSBoundary - Im DM+Plex: Boundary integration functions are now stored in a PetscWeakForm held in the Boundary object - Boundary residual/Jacobian functions now take a form key - Now store DMLabel in DSBoundary - Improved Boundary, Weak Form, and DS viewers - Remove DMCopyBoundary(), DMCopyDisc() is sufficient - Need DMTransferDS_Internal() to create new DS with label in the correct DM - Correct all DMAddBoundary() in tests - Allow DMBoundary to hold just a label name if necessary since p4est is missing labels in a lot of places - Fix propagating coordinate dimension in DS show more ... /petsc/include/petsc/private/petscdsimpl.h /petsc/include/petsc/private/petscfeimpl.h /petsc/include/petscdm.h /petsc/include/petscdmplex.h /petsc/include/petscdmtypes.h /petsc/include/petscds.h /petsc/include/petscfe.h /petsc/src/dm/dt/fe/impls/basic/febasic.c /petsc/src/dm/dt/fe/interface/fe.c /petsc/src/dm/dt/fe/tests/ex1.c /petsc/src/dm/dt/interface/dtds.c /petsc/src/dm/dt/interface/dtweakform.c /petsc/src/dm/dt/tests/ex10.c /petsc/src/dm/impls/forest/forest.c /petsc/src/dm/impls/forest/tests/ex2.c plexadapt.c plexcoarsen.c plexdistribute.c plexfem.c plexrefine.c plexsection.c plexsubmesh.c tests/ex39.c tests/ex5.c tutorials/ex2.c /petsc/src/dm/interface/dm.c /petsc/src/docs/sphinx_docs/manual/fe.rst /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/snes/tests/ex13.c /petsc/src/snes/tutorials/ex12.c /petsc/src/snes/tutorials/ex13.c /petsc/src/snes/tutorials/ex17.c /petsc/src/snes/tutorials/ex20.c /petsc/src/snes/tutorials/ex23.c /petsc/src/snes/tutorials/ex24.c /petsc/src/snes/tutorials/ex56.c /petsc/src/snes/tutorials/ex62.c /petsc/src/snes/tutorials/ex63.c /petsc/src/snes/tutorials/ex69.c /petsc/src/snes/tutorials/ex71.c /petsc/src/snes/tutorials/ex76.c /petsc/src/snes/tutorials/ex77.c /petsc/src/tao/tutorials/ex1.c /petsc/src/tao/tutorials/ex2.c /petsc/src/tao/tutorials/ex3.c /petsc/src/ts/tutorials/ex11.c /petsc/src/ts/tutorials/ex11_sa.c /petsc/src/ts/tutorials/ex18.c /petsc/src/ts/tutorials/ex45.c /petsc/src/ts/tutorials/ex46.c /petsc/src/ts/tutorials/ex47.c /petsc/src/ts/tutorials/ex48.c /petsc/src/ts/tutorials/ex53.c /petsc/src/ts/tutorials/ex76.c /petsc/src/ts/tutorials/ex77.c
06d8a0d3	23-Mar-2021	Matthew G. Knepley <knepley@gmail.com>	DS+FE+Doc: Make BdResidual take a key - Add documentation /petsc/include/petsc/private/petscfeimpl.h /petsc/include/petscfe.h /petsc/src/dm/dt/fe/impls/basic/febasic.c /petsc/src/dm/dt/fe/interface/fe.c plexfem.c /petsc/src/docs/sphinx_docs/manual/fe.rst
16f8cdc7	09-Apr-2021	Satish Balay <balay@mcs.anl.gov>	Merge remote-tracking branch 'origin/barry/2021-03-28/fix-mpiu-allreduce-mpi-failure' Fix capture of MPI error code in MPIU_Allreduce() See merge request petsc/petsc!3777 /petsc/.gitlab-ci.yml /petsc/config/BuildSystem/config/compilerFlags.py /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/BuildSystem/config/packages/OpenMPI.py /petsc/config/BuildSystem/config/packages/bamg.py /petsc/config/BuildSystem/config/packages/boost.py /petsc/config/BuildSystem/config/packages/eigen.py /petsc/config/BuildSystem/config/packages/exodusii.py /petsc/config/BuildSystem/config/packages/kokkos.py /petsc/config/examples/arch-ci-linux-cuda-double.py /petsc/config/examples/arch-ci-linux-without-fc.py /petsc/config/examples/arch-ci-osx-xsdk-opt.py /petsc/include/petsc/private/petscimpl.h /petsc/include/petsc/private/snesimpl.h /petsc/include/petsc/private/vecimpl.h /petsc/include/petsclog.h /petsc/include/petscsys.h /petsc/lib/petsc/conf/rules /petsc/makefile /petsc/src/dm/field/impls/da/dmfieldda.c /petsc/src/dm/impls/da/dagtona.c /petsc/src/dm/impls/da/dasub.c /petsc/src/dm/impls/forest/p4est/pforest.c /petsc/src/dm/impls/moab/dmmbvec.cxx /petsc/src/dm/impls/moab/dmmoab.cxx /petsc/src/dm/impls/network/network.c generators/triangle/trigenerate.c plex.c plexdistribute.c plexfem.c plexgeometry.c plexglvis.c plexhdf5.c plexpreallocate.c plextree.c plexvtk.c /petsc/src/dm/interface/dm.c /petsc/src/dm/interface/dmi.c /petsc/src/dm/partitioner/impls/simple/partsimple.c /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/ksp/guess/impls/pod/pod.c /petsc/src/ksp/ksp/impls/bcgs/fbcgsr/fbcgsr.c /petsc/src/ksp/ksp/impls/cg/cg.c /petsc/src/ksp/ksp/impls/cg/pipecg2/pipecg2.c /petsc/src/ksp/ksp/impls/cg/pipelcg/pipelcg.c /petsc/src/ksp/ksp/impls/gmres/agmres/agmresorthog.c /petsc/src/ksp/ksp/impls/ibcgs/ibcgs.c /petsc/src/ksp/ksp/interface/iterativ.c /petsc/src/ksp/ksp/tutorials/ex10.c /petsc/src/ksp/pc/impls/asm/asm.c /petsc/src/ksp/pc/impls/bddc/bddc.c /petsc/src/ksp/pc/impls/bddc/bddcgraph.c /petsc/src/ksp/pc/impls/bddc/bddcprivate.c /petsc/src/ksp/pc/impls/bjacobi/bjacobi.c /petsc/src/ksp/pc/impls/gamg/geo.c /petsc/src/ksp/pc/impls/gasm/gasm.c /petsc/src/ksp/pc/impls/hara/pchara.cu /petsc/src/ksp/pc/impls/hpddm/hpddm.cxx /petsc/src/ksp/pc/impls/redistribute/redistribute.c /petsc/src/mat/coarsen/impls/hem/hem.c /petsc/src/mat/coarsen/impls/mis/mis.c /petsc/src/mat/color/impls/greedy/greedy.c /petsc/src/mat/color/impls/jp/jp.c /petsc/src/mat/impls/adj/mpi/mpiadj.c /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/mpi/mpimatmatmult.c /petsc/src/mat/impls/aij/mpi/mpiov.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/baij/mpi/baijov.c /petsc/src/mat/impls/baij/mpi/mpibaij.c /petsc/src/mat/impls/baij/seq/baij.c /petsc/src/mat/impls/dense/mpi/mmdense.c /petsc/src/mat/impls/dense/mpi/mpidense.c /petsc/src/mat/impls/dense/seq/dense.c /petsc/src/mat/impls/elemental/matelem.cxx /petsc/src/mat/impls/is/matis.c /petsc/src/mat/impls/kaij/kaij.c /petsc/src/mat/impls/lrc/lrc.c /petsc/src/mat/impls/mffd/mffd.c /petsc/src/mat/impls/normal/normm.c /petsc/src/mat/impls/normal/normmh.c /petsc/src/mat/impls/preallocator/matpreallocator.c /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c /petsc/src/mat/impls/sbaij/mpi/sbaijov.c /petsc/src/mat/impls/sbaij/seq/sbaij.c /petsc/src/mat/impls/scalapack/matscalapack.c /petsc/src/mat/impls/sell/mpi/mpisell.c /petsc/src/mat/interface/matrix.c /petsc/src/mat/utils/axpy.c /petsc/src/mat/utils/bandwidth.c /petsc/src/mat/utils/matstash.c /petsc/src/snes/impls/gs/gssecant.c /petsc/src/snes/impls/nasm/nasm.c /petsc/src/snes/impls/vi/vi.c /petsc/src/snes/interface/snesut.c /petsc/src/snes/tutorials/makefile /petsc/src/snes/utils/dmplexsnes.c /petsc/src/sys/classes/viewer/impls/glvis/glvis.c /petsc/src/sys/fileio/fretrieve.c /petsc/src/sys/logging/plog.c /petsc/src/sys/logging/xmllogevent.c /petsc/src/sys/objects/pinit.c /petsc/src/sys/objects/tagm.c /petsc/src/sys/utils/mpimesg.c /petsc/src/sys/utils/mpits.c /petsc/src/sys/utils/pbarrier.c /petsc/src/sys/utils/pdisplay.c /petsc/src/sys/utils/psplit.c /petsc/src/sys/utils/sseenabled.c /petsc/src/tao/bound/utils/isutil.c /petsc/src/tao/constrained/impls/ipm/pdipm.c /petsc/src/tao/constrained/impls/ipm/pdipm.h /petsc/src/tao/constrained/tutorials/ex1.c /petsc/src/tao/linesearch/impls/owarmijo/owarmijo.c /petsc/src/ts/event/tsevent.c /petsc/src/ts/impls/implicit/glle/glle.c /petsc/src/ts/interface/ts.c /petsc/src/ts/interface/tshistory.c /petsc/src/ts/tutorials/ex11.c /petsc/src/ts/tutorials/network/wash/pipes1.c /petsc/src/ts/utils/dmplexlandau/tutorials/ex2.c /petsc/src/vec/is/is/interface/index.c /petsc/src/vec/is/is/utils/iscoloring.c /petsc/src/vec/is/is/utils/iscomp.c /petsc/src/vec/is/is/utils/isdiff.c /petsc/src/vec/is/section/interface/section.c /petsc/src/vec/is/sf/impls/basic/allgather/sfallgather.c /petsc/src/vec/is/sf/impls/basic/allgatherv/sfallgatherv.c /petsc/src/vec/is/sf/impls/basic/alltoall/sfalltoall.c /petsc/src/vec/is/sf/impls/basic/gather/sfgather.c /petsc/src/vec/is/sf/impls/basic/gatherv/sfgatherv.c /petsc/src/vec/is/sf/impls/window/sfwindow.c /petsc/src/vec/is/sf/interface/sf.c /petsc/src/vec/is/sf/interface/vscat.c /petsc/src/vec/is/sf/utils/sfutils.c /petsc/src/vec/is/utils/isltog.c /petsc/src/vec/is/utils/pmap.c /petsc/src/vec/vec/impls/mpi/kokkos/mpikok.kokkos.cxx /petsc/src/vec/vec/impls/mpi/mpicuda/mpicuda.cu /petsc/src/vec/vec/impls/mpi/mpihip/mpihip.hip.cpp /petsc/src/vec/vec/impls/mpi/mpiviennacl/mpiviennacl.cxx /petsc/src/vec/vec/impls/mpi/pbvec.c /petsc/src/vec/vec/impls/mpi/pdvec.c /petsc/src/vec/vec/impls/mpi/pvec2.c /petsc/src/vec/vec/impls/seq/dvec2.c /petsc/src/vec/vec/interface/rvector.c /petsc/src/vec/vec/utils/comb.c /petsc/src/vec/vec/utils/projection.c /petsc/src/vec/vec/utils/tagger/impls/relative.c /petsc/src/vec/vec/utils/vinv.c
0885897c	09-Apr-2021	Matthew Knepley <knepley@gmail.com>	Plex: Fortran wrapper for DMPlexExtrude /petsc/.gitlab-ci.yml /petsc/config/BuildSystem/config/compilerFlags.py /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/BuildSystem/config/packages/OpenMPI.py /petsc/config/BuildSystem/config/packages/bamg.py /petsc/config/BuildSystem/config/packages/boost.py /petsc/config/BuildSystem/config/packages/cuda.py /petsc/config/BuildSystem/config/packages/eigen.py /petsc/config/BuildSystem/config/packages/exodusii.py /petsc/config/BuildSystem/config/packages/kokkos.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/PETSc/options/libraryOptions.py /petsc/config/examples/arch-ci-linux-cuda-double.py /petsc/config/examples/arch-ci-linux-without-fc.py /petsc/config/examples/arch-ci-osx-xsdk-opt.py /petsc/config/petsc_harness.sh /petsc/gmakefile /petsc/gmakefile.test /petsc/include/petsc/private/fortranimpl.h /petsc/include/petsc/private/petscdsimpl.h /petsc/include/petsc/private/petschpddm.h /petsc/include/petsc/private/vecimpl.h /petsc/lib/petsc/bin/maint/rebuildtar /petsc/lib/petsc/bin/maint/validate-petsc4py.sh /petsc/lib/petsc/bin/maint/xclude /petsc/lib/petsc/conf/rules /petsc/makefile /petsc/src/binding/petsc4py/DESCRIPTION.rst /petsc/src/binding/petsc4py/conf/baseconf.py /petsc/src/binding/petsc4py/setup.py /petsc/src/dm/dt/dualspace/interface/dualspace.c /petsc/src/dm/dt/fe/interface/fe.c /petsc/src/dm/dt/interface/dtweakform.c /petsc/src/dm/dt/space/interface/space.c /petsc/src/dm/impls/forest/p4est/pforest.c /petsc/src/dm/impls/forest/tests/ex1.c /petsc/src/dm/impls/forest/tests/output/ex1_1.out ftn-custom/zplexcreate.c /petsc/src/docs/website/documentation/changes/314.html /petsc/src/docs/website/documentation/changes/315.html /petsc/src/docs/website/documentation/referencing.html /petsc/src/docs/website/index.html /petsc/src/ksp/ksp/impls/cg/cg.c /petsc/src/ksp/pc/impls/hpddm/hpddm.cxx /petsc/src/ksp/pc/impls/mg/ftn-custom/zmgf.c /petsc/src/ksp/pc/impls/mg/mg.c /petsc/src/ksp/pc/tests/ex8f.F /petsc/src/ksp/pc/tests/makefile /petsc/src/ksp/pc/tests/output/ex8f_1.out /petsc/src/mat/impls/aij/mpi/mpimatmatmult.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/baij/seq/baij.c /petsc/src/mat/impls/dense/seq/cuda/densecuda.cu /petsc/src/mat/impls/dense/seq/dense.c /petsc/src/mat/impls/kaij/kaij.c /petsc/src/mat/impls/sbaij/seq/sbaij.c /petsc/src/mat/interface/matrix.c /petsc/src/mat/tests/ex239.c /petsc/src/mat/tests/makefile /petsc/src/mat/tests/output/ex239_1.out /petsc/src/snes/tutorials/makefile /petsc/src/sys/classes/draw/interface/drawreg.c /petsc/src/sys/classes/draw/interface/dtext.c /petsc/src/sys/classes/random/interface/random.c /petsc/src/sys/error/signal.c /petsc/src/sys/f90-mod/petscsysmod.F90 /petsc/src/sys/ftn-custom/zutils.c /petsc/src/sys/objects/ftn-custom/zstartf.c /petsc/src/sys/objects/inherit.c /petsc/src/tao/constrained/tutorials/ex1.c /petsc/src/ts/tutorials/ex11.c /petsc/src/ts/utils/dmplexlandau/plexland.c /petsc/src/vec/vec/impls/mpi/kokkos/mpikok.kokkos.cxx /petsc/src/vec/vec/impls/mpi/mpicuda/mpicuda.cu /petsc/src/vec/vec/impls/mpi/pvec2.c /petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu /petsc/src/vec/vec/utils/vinv.c
cd5a5f19	07-Apr-2021	Blaise Bourdin <bourdin@lsu.edu>	exodusii: updated test output for ex26 and added output for ex62, ex26f90, and ex62f90 tests/output/ex26_0.out tests/output/ex26_1.out tests/output/ex26_10.out tests/output/ex26_12.out tests/output/ex26_13.out tests/output/ex26_14.out tests/output/ex26_15.out tests/output/ex26_16.out tests/output/ex26_17.out tests/output/ex26_18.out tests/output/ex26_19.out tests/output/ex26_2.out tests/output/ex26_3.out tests/output/ex26_4.out tests/output/ex26_5.out tests/output/ex26_6.out tests/output/ex26_7.out tests/output/ex26_8.out tests/output/ex26_9.out tests/output/ex26f90_0.out tests/output/ex26f90_1.out tests/output/ex26f90_10.out tests/output/ex26f90_12.out tests/output/ex26f90_13.out tests/output/ex26f90_14.out tests/output/ex26f90_15.out tests/output/ex26f90_16.out tests/output/ex26f90_17.out tests/output/ex26f90_18.out tests/output/ex26f90_19.out tests/output/ex26f90_2.out tests/output/ex26f90_3.out tests/output/ex26f90_4.out tests/output/ex26f90_5.out tests/output/ex26f90_6.out tests/output/ex26f90_7.out tests/output/ex26f90_8.out tests/output/ex26f90_9.out tests/output/ex62_0.out tests/output/ex62_1.out tests/output/ex62_10.out tests/output/ex62_12.out tests/output/ex62_13.out tests/output/ex62_14.out tests/output/ex62_15.out tests/output/ex62_16.out tests/output/ex62_17.out tests/output/ex62_18.out tests/output/ex62_19.out tests/output/ex62_2.out tests/output/ex62_3.out tests/output/ex62_4.out tests/output/ex62_5.out tests/output/ex62_6.out tests/output/ex62_7.out tests/output/ex62_8.out tests/output/ex62_9.out tests/output/ex62f90_0.out tests/output/ex62f90_1.out tests/output/ex62f90_10.out tests/output/ex62f90_12.out tests/output/ex62f90_13.out tests/output/ex62f90_14.out tests/output/ex62f90_15.out tests/output/ex62f90_16.out tests/output/ex62f90_17.out tests/output/ex62f90_18.out tests/output/ex62f90_19.out tests/output/ex62f90_2.out tests/output/ex62f90_3.out tests/output/ex62f90_4.out tests/output/ex62f90_5.out tests/output/ex62f90_6.out tests/output/ex62f90_7.out tests/output/ex62f90_8.out tests/output/ex62f90_9.out
280aadf6	07-Apr-2021	Blaise Bourdin <bourdin@lsu.edu>	exodusii: added fortran versions of src/dm/impls/plex/tests/ex26.c and ex62.c tests/ex26f90.F90 tests/ex62f90.F90
6823f3c5	06-Apr-2021	Blaise Bourdin <bourdin@lsu.edu>	exodusii: viewer updates - finished implementing PETSCVIEWEREXODUSII - Call the proper exodusii function when VecView/Load and DMView/Load are invoked on a PETSCVIEWEREXODUSII viewer - Added exodusii: viewer updates - finished implementing PETSCVIEWEREXODUSII - Call the proper exodusii function when VecView/Load and DMView/Load are invoked on a PETSCVIEWEREXODUSII viewer - Added interface to define second order exodusii meshes - updated dm/impls/plex/tests/ex26.c show more ... /petsc/.gitlab-ci.yml /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/cuda.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/PETSc/Configure.py /petsc/gmakefile /petsc/gmakefile.test /petsc/include/petsc/finclude/petscviewer.h /petsc/include/petsc/private/dmnetworkimpl.h /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petsc/private/fortranimpl.h /petsc/include/petsc/private/petscdsimpl.h /petsc/include/petsc/private/petschpddm.h /petsc/include/petsc/private/tsimpl.h /petsc/include/petsc/private/viewerexodusiiimpl.h /petsc/include/petscdmplex.h /petsc/include/petscviewerexodusii.h /petsc/lib/petsc/bin/maint/validate-petsc4py.sh /petsc/lib/petsc/conf/rules /petsc/src/binding/petsc4py/DESCRIPTION.rst /petsc/src/binding/petsc4py/conf/baseconf.py /petsc/src/binding/petsc4py/setup.py /petsc/src/dm/dt/dualspace/interface/dualspace.c /petsc/src/dm/dt/interface/dtweakform.c /petsc/src/dm/f90-mod/petscdmplex.h90 /petsc/src/dm/impls/forest/p4est/pforest.c /petsc/src/dm/impls/forest/tests/ex1.c /petsc/src/dm/impls/forest/tests/output/ex1_1.out /petsc/src/dm/impls/network/network.c ftn-custom/zplexexodusii.c plex.c plexexodusii.c tests/ex26.c /petsc/src/dm/impls/stag/stag1d.c /petsc/src/dm/impls/stag/stag2d.c /petsc/src/dm/impls/stag/stag3d.c /petsc/src/dm/impls/stag/stagutils.c /petsc/src/dm/impls/stag/tests/output/ex23_1.out /petsc/src/dm/impls/stag/tests/output/ex23_2.out /petsc/src/dm/impls/stag/tests/output/ex35_par_1d.out /petsc/src/dm/impls/stag/tests/output/ex35_par_2d.out /petsc/src/dm/impls/stag/tests/output/ex35_par_3d.out /petsc/src/dm/impls/stag/tests/output/ex35_seq_1d.out /petsc/src/dm/impls/stag/tests/output/ex35_seq_2d.out /petsc/src/dm/impls/stag/tests/output/ex35_seq_3d.out /petsc/src/dm/impls/stag/tests/output/ex4_1d_1.out /petsc/src/dm/impls/stag/tests/output/ex4_1d_2.out /petsc/src/dm/impls/stag/tests/output/ex4_2d_1.out /petsc/src/dm/impls/stag/tests/output/ex4_2d_2.out /petsc/src/dm/impls/stag/tests/output/ex4_3d_1.out /petsc/src/dm/impls/stag/tests/output/ex4_3d_2.out /petsc/src/dm/impls/stag/tutorials/output/ex3_2.out /petsc/src/dm/interface/dm.c /petsc/src/dm/interface/ftn-custom/zdmf.c /petsc/src/docs/sphinx_docs/manual/dmplex.rst /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/pc/impls/hpddm/hpddm.cxx /petsc/src/ksp/pc/impls/mg/ftn-custom/zmgf.c /petsc/src/ksp/pc/impls/mg/mg.c /petsc/src/ksp/pc/tests/ex8f.F /petsc/src/ksp/pc/tests/makefile /petsc/src/ksp/pc/tests/output/ex8f_1.out /petsc/src/mat/impls/dense/seq/cuda/densecuda.cu /petsc/src/mat/tests/ex239.c /petsc/src/mat/tests/makefile /petsc/src/mat/tests/output/ex239_1.out /petsc/src/snes/tutorials/makefile /petsc/src/sys/classes/draw/interface/drawreg.c /petsc/src/sys/classes/draw/interface/dtext.c /petsc/src/sys/classes/random/interface/random.c /petsc/src/sys/classes/viewer/interface/ftn-custom/zviewaf.c /petsc/src/sys/error/signal.c /petsc/src/sys/f90-mod/petscsysmod.F90 /petsc/src/sys/ftn-custom/zutils.c /petsc/src/sys/objects/ftn-custom/zstartf.c /petsc/src/sys/objects/inherit.c /petsc/src/ts/event/tsevent.c /petsc/src/ts/tutorials/ex11.c /petsc/src/ts/utils/dmplexlandau/plexland.c /petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu /petsc/src/vec/vec/interface/vector.c
820f2d46	03-Apr-2021	Barry Smith <bsmith@mcs.anl.gov>	All MPIU_ functions except MPIU_File return MPI error codes for checking Update checkbadSource to find use of CHKERRQ with MPIU_ functions Commit-type: i.e. error-checking, optimization, bug-fix, p All MPIU_ functions except MPIU_File return MPI error codes for checking Update checkbadSource to find use of CHKERRQ with MPIU_ functions Commit-type: i.e. error-checking, optimization, bug-fix, portability-fix, testing-fix, style-fix, feature, documentation, example Funded-by: Project: Time: hours Reported-by: Thanks-to: Development Tools: Vim, Emacs, Eclipse show more ... /petsc/.gitlab-ci.yml /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/PETSc/Configure.py /petsc/gmakefile /petsc/gmakefile.test /petsc/include/petsc/private/dmnetworkimpl.h /petsc/include/petsc/private/petscdsimpl.h /petsc/include/petsc/private/petscimpl.h 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/petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu /petsc/src/vec/vec/interface/rvector.c /petsc/src/vec/vec/utils/comb.c /petsc/src/vec/vec/utils/projection.c /petsc/src/vec/vec/utils/tagger/impls/relative.c /petsc/src/vec/vec/utils/vinv.c
a09b138c	02-Apr-2021	Satish Balay <balay@mcs.anl.gov>	Merge branch 'knepley/feature-dm-aux-data' into 'main' DM: Replace object composition with an API for auxiliary data See merge request petsc/petsc!3798 /petsc/.gitignore /petsc/.gitlab-ci.yml /petsc/.mailmap /petsc/config/PETSc/options/libraryOptions.py /petsc/config/petsc_harness.sh /petsc/include/petsc/finclude/petscviewer.h /petsc/include/petsc/private/dmimpl.h /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petsc/private/dmswarmimpl.h /petsc/include/petsc/private/matimpl.h /petsc/include/petsc/private/tsimpl.h /petsc/include/petscdm.h /petsc/include/petscdmswarm.h /petsc/include/petscmat.h /petsc/include/petscts.h /petsc/include/petscversion.h /petsc/include/petscviewer.h /petsc/lib/petsc/bin/maint/rebuildtar /petsc/lib/petsc/bin/maint/xclude /petsc/src/binding/petsc4py/src/PETSc/Mat.pyx /petsc/src/binding/petsc4py/src/PETSc/Viewer.pyx /petsc/src/binding/petsc4py/src/PETSc/petscmat.pxi /petsc/src/binding/petsc4py/src/PETSc/petscvwr.pxi /petsc/src/binding/petsc4py/test/test_dmda.py /petsc/src/binding/petsc4py/test/test_mat_py.py /petsc/src/dm/dt/dualspace/interface/dualspace.c /petsc/src/dm/dt/fe/interface/fe.c /petsc/src/dm/dt/space/interface/space.c plexfem.c plexhpddm.c plexproject.c tests/ex23.c /petsc/src/dm/impls/swarm/data_bucket.c /petsc/src/dm/impls/swarm/swarm.c /petsc/src/dm/impls/swarm/tests/ex3.c /petsc/src/dm/impls/swarm/tests/output/ex3_1.out /petsc/src/dm/interface/dm.c /petsc/src/docs/website/documentation/changes/314.html /petsc/src/docs/website/documentation/changes/315.html /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/docs/website/documentation/referencing.html /petsc/src/docs/website/index.html /petsc/src/ksp/pc/impls/factor/cholesky/cholesky.c /petsc/src/ksp/pc/impls/factor/factimpl.c /petsc/src/ksp/pc/impls/factor/factor.c /petsc/src/ksp/pc/impls/factor/factor.h /petsc/src/ksp/pc/impls/factor/icc/icc.c /petsc/src/ksp/pc/impls/factor/ilu/ilu.c /petsc/src/ksp/pc/impls/factor/lu/lu.c /petsc/src/ksp/pc/tests/output/ex8_1.out /petsc/src/mat/impls/aij/mpi/mkl_cpardiso/mkl_cpardiso.c /petsc/src/mat/impls/aij/mpi/mumps/mumps.c /petsc/src/mat/impls/aij/mpi/pastix/pastix.c /petsc/src/mat/impls/aij/mpi/strumpack/strumpack.c /petsc/src/mat/impls/aij/seq/aijfact.c /petsc/src/mat/impls/aij/seq/bas/basfactor.c /petsc/src/mat/impls/aij/seq/cholmod/aijcholmod.c /petsc/src/mat/impls/aij/seq/essl/essl.c /petsc/src/mat/impls/aij/seq/klu/klu.c /petsc/src/mat/impls/aij/seq/kokkos/aijkok.kokkos.cxx /petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu /petsc/src/mat/impls/aij/seq/umfpack/umfpack.c /petsc/src/mat/impls/baij/seq/baijfact.c /petsc/src/mat/impls/dense/seq/cuda/densecuda.cu /petsc/src/mat/impls/dense/seq/dense.c /petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c /petsc/src/mat/impls/sbaij/seq/sbaij.c /petsc/src/mat/interface/matrix.c /petsc/src/mat/order/sorder.c /petsc/src/mat/order/spnd.c /petsc/src/snes/tutorials/ex12.c /petsc/src/snes/tutorials/ex13.c /petsc/src/snes/tutorials/ex19.c /petsc/src/snes/tutorials/ex77.c /petsc/src/snes/utils/dmplexsnes.c /petsc/src/sys/classes/draw/utils/hists.c /petsc/src/sys/classes/viewer/impls/makefile /petsc/src/sys/classes/viewer/interface/viewregall.c /petsc/src/sys/objects/pinit.c /petsc/src/ts/interface/makefile /petsc/src/ts/interface/ts.c /petsc/src/ts/interface/tsmon.c /petsc/src/ts/tests/ex27.c /petsc/src/ts/tests/ex28.c /petsc/src/ts/tests/output/ex27_midpoint.out /petsc/src/ts/tests/output/ex28_1.out /petsc/src/ts/tests/output/ex28_2.out /petsc/src/ts/tutorials/ex47.c /petsc/src/ts/tutorials/ex48.c /petsc/src/ts/utils/dmplexts.c /petsc/src/vec/vec/impls/mpi/pdvec.c /petsc/src/vec/vec/impls/mpi/pvecimpl.h /petsc/src/vec/vec/impls/seq/bvec2.c /petsc/src/vec/vec/interface/vector.c /petsc/src/vec/vec/tests/ex100.cu /petsc/src/vec/vec/tutorials/ex10.c /petsc/src/vec/vec/utils/vecio.c
9a2a23af	02-Apr-2021	Matthew G. Knepley <knepley@gmail.com>	DM: Replace object composition with an API for auxiliary data - Now allow data to be tagged with a label+value - Do not separately require a DM and Vec, get the DM from the Vec /petsc/.mailmap /petsc/LICENSE /petsc/config/BuildSystem/config/compilersFortran.py /petsc/config/BuildSystem/config/packages/exodusii.py /petsc/config/BuildSystem/config/packages/slepc.py /petsc/include/petsc/private/dmimpl.h /petsc/include/petsc/private/fortranimpl.h /petsc/include/petscdm.h /petsc/include/petscversion.h /petsc/lib/petsc/bin/maint/builddist /petsc/lib/petsc/bin/maint/rebuildtar /petsc/lib/petsc/bin/maint/update-docs.py /petsc/makefile /petsc/setup.py /petsc/src/binding/petsc4py/CHANGES.rst /petsc/src/binding/petsc4py/DESCRIPTION.rst /petsc/src/binding/petsc4py/docs/index.rst /petsc/src/binding/petsc4py/docs/source/citing.rst /petsc/src/binding/petsc4py/docs/source/overview.rst /petsc/src/binding/petsc4py/src/__init__.py plexfem.c plexhpddm.c plexproject.c tests/ex23.c /petsc/src/dm/interface/dm.c /petsc/src/dm/interface/ftn-custom/zdmf.c /petsc/src/docs/sphinx_docs/install/download_documentation.rst /petsc/src/docs/tao_tex/manual/cover.tex /petsc/src/docs/tex/petsc.bib /petsc/src/docs/tex/petscapp.bib /petsc/src/docs/website/documentation/changes/2015.html /petsc/src/docs/website/documentation/changes/2016.html /petsc/src/docs/website/documentation/changes/2017.html /petsc/src/docs/website/documentation/changes/2018-21.html /petsc/src/docs/website/documentation/changes/2022.html /petsc/src/docs/website/documentation/changes/2024.html /petsc/src/docs/website/documentation/changes/2028.html /petsc/src/docs/website/documentation/changes/2029.html /petsc/src/docs/website/documentation/changes/21.html /petsc/src/docs/website/documentation/changes/211.html /petsc/src/docs/website/documentation/changes/212.html /petsc/src/docs/website/documentation/changes/213.html /petsc/src/docs/website/documentation/changes/215.html /petsc/src/docs/website/documentation/changes/216.html /petsc/src/docs/website/documentation/changes/220.html /petsc/src/docs/website/documentation/changes/221.html /petsc/src/docs/website/documentation/changes/230.html /petsc/src/docs/website/documentation/changes/231.html /petsc/src/docs/website/documentation/changes/232.html /petsc/src/docs/website/documentation/changes/233.html /petsc/src/docs/website/documentation/changes/300.html /petsc/src/docs/website/documentation/changes/31.html /petsc/src/docs/website/documentation/changes/310.html /petsc/src/docs/website/documentation/changes/311.html /petsc/src/docs/website/documentation/changes/312.html /petsc/src/docs/website/documentation/changes/313.html /petsc/src/docs/website/documentation/changes/315.html /petsc/src/docs/website/documentation/changes/32.html /petsc/src/docs/website/documentation/changes/33.html /petsc/src/docs/website/documentation/changes/34.html /petsc/src/docs/website/documentation/changes/35.html /petsc/src/docs/website/documentation/changes/36.html /petsc/src/docs/website/documentation/changes/37.html /petsc/src/docs/website/documentation/changes/38.html /petsc/src/docs/website/documentation/changes/39.html /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/docs/website/documentation/changes/index.html /petsc/src/docs/website/documentation/installation.html /petsc/src/docs/website/documentation/license.html /petsc/src/docs/website/documentation/referencing.html /petsc/src/docs/website/download/index.html /petsc/src/ksp/ksp/interface/f90-custom/zitfuncf90.c /petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/ksp/pc/interface/ftn-custom/zpreconf.c /petsc/src/ksp/pc/interface/precon.c /petsc/src/mat/impls/dense/seq/dense.c /petsc/src/mat/interface/ftn-custom/zmatrixf.c /petsc/src/mat/interface/matrix.c /petsc/src/snes/interface/f90-custom/zsnesf90.c /petsc/src/snes/interface/snes.c /petsc/src/snes/tutorials/ex12.c /petsc/src/snes/tutorials/ex13.c /petsc/src/snes/tutorials/ex77.c /petsc/src/snes/utils/dmplexsnes.c /petsc/src/tao/interface/ftn-custom/ztaosolverf.c /petsc/src/tao/interface/taosolver.c /petsc/src/ts/interface/ftn-custom/ztscreatef.c /petsc/src/ts/interface/ts.c /petsc/src/ts/tutorials/ex47.c /petsc/src/ts/tutorials/ex48.c /petsc/src/ts/utils/dmplexts.c /petsc/src/vec/is/is/interface/f90-custom/zindexf90.c /petsc/src/vec/is/is/interface/index.c /petsc/src/vec/is/sf/impls/basic/neighbor/sfneighbor.c /petsc/src/vec/is/sf/interface/ftn-custom/zsf.c /petsc/src/vec/is/sf/interface/ftn-custom/zvscat.c /petsc/src/vec/is/sf/interface/sf.c /petsc/src/vec/is/sf/interface/vscat.c /petsc/src/vec/is/sf/tests/ex1f.F90 /petsc/src/vec/vec/interface/f90-custom/zvectorf90.c /petsc/src/vec/vec/interface/vector.c
d1674c6d	31-Mar-2021	Matthew Knepley <knepley@gmail.com>	Plex: Handle 0 overlap case in DMPlexCreateOverlapLabel() /petsc/LICENSE /petsc/config/BuildSystem/config/compilersFortran.py /petsc/config/BuildSystem/config/packages/exodusii.py /petsc/config/BuildSystem/config/packages/slepc.py /petsc/include/petsc/private/fortranimpl.h /petsc/include/petscversion.h /petsc/lib/petsc/bin/maint/builddist /petsc/lib/petsc/bin/maint/rebuildtar /petsc/lib/petsc/bin/maint/update-docs.py /petsc/makefile /petsc/setup.py /petsc/src/binding/petsc4py/CHANGES.rst /petsc/src/binding/petsc4py/DESCRIPTION.rst /petsc/src/binding/petsc4py/docs/index.rst /petsc/src/binding/petsc4py/docs/source/citing.rst /petsc/src/binding/petsc4py/docs/source/overview.rst /petsc/src/binding/petsc4py/src/__init__.py plexdistribute.c /petsc/src/dm/interface/dm.c /petsc/src/dm/interface/ftn-custom/zdmf.c /petsc/src/docs/sphinx_docs/install/download_documentation.rst /petsc/src/docs/tao_tex/manual/cover.tex /petsc/src/docs/tex/petscapp.bib /petsc/src/docs/website/documentation/changes/2015.html /petsc/src/docs/website/documentation/changes/2016.html /petsc/src/docs/website/documentation/changes/2017.html /petsc/src/docs/website/documentation/changes/2018-21.html /petsc/src/docs/website/documentation/changes/2022.html /petsc/src/docs/website/documentation/changes/2024.html /petsc/src/docs/website/documentation/changes/2028.html /petsc/src/docs/website/documentation/changes/2029.html /petsc/src/docs/website/documentation/changes/21.html /petsc/src/docs/website/documentation/changes/211.html /petsc/src/docs/website/documentation/changes/212.html /petsc/src/docs/website/documentation/changes/213.html /petsc/src/docs/website/documentation/changes/215.html /petsc/src/docs/website/documentation/changes/216.html /petsc/src/docs/website/documentation/changes/220.html /petsc/src/docs/website/documentation/changes/221.html /petsc/src/docs/website/documentation/changes/230.html /petsc/src/docs/website/documentation/changes/231.html /petsc/src/docs/website/documentation/changes/232.html /petsc/src/docs/website/documentation/changes/233.html /petsc/src/docs/website/documentation/changes/300.html /petsc/src/docs/website/documentation/changes/31.html /petsc/src/docs/website/documentation/changes/310.html /petsc/src/docs/website/documentation/changes/311.html /petsc/src/docs/website/documentation/changes/312.html /petsc/src/docs/website/documentation/changes/313.html /petsc/src/docs/website/documentation/changes/315.html /petsc/src/docs/website/documentation/changes/32.html /petsc/src/docs/website/documentation/changes/33.html /petsc/src/docs/website/documentation/changes/34.html /petsc/src/docs/website/documentation/changes/35.html /petsc/src/docs/website/documentation/changes/36.html /petsc/src/docs/website/documentation/changes/37.html /petsc/src/docs/website/documentation/changes/38.html /petsc/src/docs/website/documentation/changes/39.html /petsc/src/docs/website/documentation/changes/index.html /petsc/src/docs/website/documentation/installation.html /petsc/src/docs/website/documentation/license.html /petsc/src/docs/website/documentation/referencing.html /petsc/src/docs/website/download/index.html /petsc/src/ksp/ksp/interface/f90-custom/zitfuncf90.c /petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/ksp/pc/interface/ftn-custom/zpreconf.c /petsc/src/ksp/pc/interface/precon.c /petsc/src/mat/impls/dense/seq/dense.c /petsc/src/mat/interface/ftn-custom/zmatrixf.c /petsc/src/mat/interface/matrix.c /petsc/src/snes/interface/f90-custom/zsnesf90.c /petsc/src/snes/interface/snes.c /petsc/src/tao/interface/ftn-custom/ztaosolverf.c /petsc/src/tao/interface/taosolver.c /petsc/src/ts/interface/ftn-custom/ztscreatef.c /petsc/src/ts/interface/ts.c /petsc/src/vec/is/is/interface/f90-custom/zindexf90.c /petsc/src/vec/is/is/interface/index.c /petsc/src/vec/is/sf/impls/basic/neighbor/sfneighbor.c /petsc/src/vec/is/sf/interface/ftn-custom/zsf.c /petsc/src/vec/is/sf/interface/ftn-custom/zvscat.c /petsc/src/vec/is/sf/interface/sf.c /petsc/src/vec/is/sf/interface/vscat.c /petsc/src/vec/is/sf/tests/ex1f.F90 /petsc/src/vec/vec/interface/f90-custom/zvectorf90.c /petsc/src/vec/vec/interface/vector.c
e671c4ce	30-Mar-2021	Satish Balay <balay@mcs.anl.gov>	Merge branch 'bourdin/plexnatural-memory-leak' into 'main' plexnatural: fixed 2 memory leaks See merge request petsc/petsc!3785 /petsc/config/BuildSystem/config/packages/OpenMPI.py /petsc/config/BuildSystem/config/packages/gmsh.py /petsc/config/BuildSystem/config/packages/mpi4py.py /petsc/config/PETSc/Configure.py /petsc/include/petscsystypes.h /petsc/include/petscviewer.h /petsc/makefile plexnatural.c /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/sys/classes/viewer/impls/adios/adios.c /petsc/src/sys/classes/viewer/impls/adios2/adios2.c /petsc/src/sys/classes/viewer/impls/ascii/filev.c /petsc/src/sys/classes/viewer/impls/binary/binv.c /petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c /petsc/src/sys/classes/viewer/impls/matlab/vmatlab.c /petsc/src/sys/classes/viewer/impls/vtk/vtkv.c /petsc/src/sys/classes/viewer/impls/vu/petscvu.c /petsc/src/sys/tests/ex55.py /petsc/src/sys/tests/makefile /petsc/src/sys/tests/output/ex55_1.testout
42e9364c	29-Mar-2021	Satish Balay <balay@mcs.anl.gov>	CI: fix compile warnings when built with --with-debugging=0 COPTFLAGS=-O3 /petsc/.gitlab-ci.yml /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/openmp.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/examples/arch-ci-linux-pkgs-dbg-ftn-interfaces.py /petsc/config/examples/arch-ci-osx-cxx-pkgs-opt.py /petsc/include/petsc/private/hashtable.h /petsc/include/petsc/private/matimpl.h /petsc/include/petsc/private/petscdsimpl.h /petsc/include/petsc/private/petscfptimpl.h /petsc/include/petsc/private/vecimpl_kokkos.hpp /petsc/include/petscdmda_kokkos.hpp /petsc/include/petsclandau.h /petsc/include/petscmat.h /petsc/include/petscvec_kokkos.hpp /petsc/lib/petsc/bin/petscmpiexec /petsc/makefile /petsc/src/binding/petsc4py/src/PETSc/TAO.pyx /petsc/src/binding/petsc4py/src/PETSc/petsctao.pxi /petsc/src/binding/petsc4py/src/include/compat/tao.h /petsc/src/dm/impls/da/kokkos/dagetov.kokkos.cxx /petsc/src/dm/impls/da/kokkos/makefile /petsc/src/dm/impls/da/makefile plexfem.c plexrefine.c /petsc/src/docs/sphinx_docs/conf.py /petsc/src/docs/sphinx_docs/genteamtable.py /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/ksp/impls/cg/pipeprcg/pipeprcg.c /petsc/src/ksp/pc/impls/gamg/gamg.c /petsc/src/mat/f90-mod/petscmat.h /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/kokkos/aijkok.kokkos.cxx /petsc/src/mat/impls/aij/seq/kokkos/aijkokkosimpl.hpp /petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu /petsc/src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h /petsc/src/mat/impls/aij/seq/umfpack/umfpack.c /petsc/src/mat/impls/dense/seq/dense.c /petsc/src/mat/interface/dlregismat.c /petsc/src/mat/interface/matrix.c /petsc/src/mat/tests/ex238.c /petsc/src/mat/tests/ex62.c /petsc/src/mat/tests/ex69.c /petsc/src/mat/utils/gcreate.c /petsc/src/snes/tutorials/ex3k.kokkos.cxx /petsc/src/snes/tutorials/makefile /petsc/src/snes/tutorials/output/ex3k_1.out /petsc/src/sys/f90-mod/petscsysmod.F90 /petsc/src/sys/logging/xmllogevent.c /petsc/src/sys/memory/mal.c /petsc/src/tao/bound/impls/bnk/bnk.c /petsc/src/tao/bound/impls/bnk/bntl.c /petsc/src/tao/bound/impls/bnk/bntr.c /petsc/src/tao/bound/impls/bqnk/bqnk.c /petsc/src/tao/bound/impls/bqnk/bqnktl.c /petsc/src/tao/bound/impls/bqnk/bqnktr.c /petsc/src/tao/leastsquares/impls/brgn/brgn.c /petsc/src/tao/leastsquares/impls/brgn/brgn.h /petsc/src/tao/leastsquares/tutorials/matlab/matlab_ls_test.c /petsc/src/ts/utils/dmplexlandau/plexland.c /petsc/src/vec/vec/impls/mpi/kokkos/mpikok.kokkos.cxx /petsc/src/vec/vec/impls/seq/kokkos/veckok.kokkos.cxx /petsc/src/vec/vec/impls/seq/kokkos/veckokkosimpl.hpp
14744f87	29-Mar-2021	Blaise Bourdin <bourdin@lsu.edu>	plexnatural: fixed 2 memory leaks /petsc/.gitlab-ci.yml /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/openmp.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/examples/arch-ci-linux-pkgs-dbg-ftn-interfaces.py /petsc/config/examples/arch-ci-osx-cxx-pkgs-opt.py /petsc/include/petsc/private/hashtable.h /petsc/include/petsc/private/matimpl.h /petsc/include/petsc/private/petscdsimpl.h /petsc/include/petsc/private/petscfptimpl.h /petsc/include/petsc/private/vecimpl_kokkos.hpp /petsc/include/petscdmda_kokkos.hpp /petsc/include/petsclandau.h /petsc/include/petscmat.h /petsc/include/petscvec_kokkos.hpp /petsc/makefile /petsc/src/binding/petsc4py/src/PETSc/TAO.pyx /petsc/src/binding/petsc4py/src/PETSc/petsctao.pxi /petsc/src/binding/petsc4py/src/include/compat/tao.h /petsc/src/dm/impls/da/kokkos/dagetov.kokkos.cxx /petsc/src/dm/impls/da/kokkos/makefile /petsc/src/dm/impls/da/makefile plexnatural.c /petsc/src/docs/sphinx_docs/conf.py /petsc/src/docs/sphinx_docs/genteamtable.py /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/ksp/impls/cg/pipeprcg/pipeprcg.c /petsc/src/ksp/pc/impls/gamg/gamg.c /petsc/src/mat/f90-mod/petscmat.h /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/kokkos/aijkok.kokkos.cxx /petsc/src/mat/impls/aij/seq/kokkos/aijkokkosimpl.hpp /petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu /petsc/src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h /petsc/src/mat/impls/aij/seq/umfpack/umfpack.c /petsc/src/mat/interface/dlregismat.c /petsc/src/mat/interface/matrix.c /petsc/src/mat/tests/ex238.c /petsc/src/mat/tests/ex62.c /petsc/src/mat/tests/ex69.c /petsc/src/mat/utils/gcreate.c /petsc/src/snes/tutorials/ex3k.kokkos.cxx /petsc/src/snes/tutorials/makefile /petsc/src/snes/tutorials/output/ex3k_1.out /petsc/src/sys/f90-mod/petscsysmod.F90 /petsc/src/sys/memory/mal.c /petsc/src/tao/bound/impls/bnk/bnk.c /petsc/src/tao/bound/impls/bnk/bntl.c /petsc/src/tao/bound/impls/bnk/bntr.c /petsc/src/tao/bound/impls/bqnk/bqnk.c /petsc/src/tao/bound/impls/bqnk/bqnktl.c /petsc/src/tao/bound/impls/bqnk/bqnktr.c /petsc/src/tao/leastsquares/impls/brgn/brgn.c /petsc/src/tao/leastsquares/impls/brgn/brgn.h /petsc/src/tao/leastsquares/tutorials/matlab/matlab_ls_test.c /petsc/src/vec/vec/impls/mpi/kokkos/mpikok.kokkos.cxx /petsc/src/vec/vec/impls/seq/kokkos/veckok.kokkos.cxx /petsc/src/vec/vec/impls/seq/kokkos/veckokkosimpl.hpp
6ac58e00	24-Mar-2021	Satish Balay <balay@mcs.anl.gov>	Merge branch 'knepley/feature-plex-ds-traversals' into 'main' DS: Moved management of pointwise functions into PetscWeakForm object - Added... See merge request petsc/petsc!3726 /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/packages/OpenMPI.py /petsc/config/BuildSystem/config/packages/blis.py /petsc/config/BuildSystem/config/packages/hpddm.py /petsc/config/BuildSystem/config/packages/mmg.py /petsc/config/BuildSystem/config/packages/parmmg.py /petsc/config/BuildSystem/config/packages/slepc.py /petsc/config/BuildSystem/config/programs.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/BuildSystem/config/utilities/featureTestMacros.py /petsc/config/PETSc/options/libraryOptions.py /petsc/config/PETSc/options/sharedLibraries.py /petsc/include/petsc/finclude/petscdm.h /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petsc/private/petscdsimpl.h /petsc/include/petsc/private/petscfeimpl.h /petsc/include/petsc/private/petschpddm.h /petsc/include/petscds.h /petsc/include/petscdstypes.h /petsc/include/petscfe.h /petsc/include/petscsys.h /petsc/lib/petsc/conf/rules /petsc/src/dm/dt/fe/impls/basic/febasic.c /petsc/src/dm/dt/fe/impls/opencl/feopencl.c /petsc/src/dm/dt/fe/interface/fe.c /petsc/src/dm/dt/fe/tests/ex1.c /petsc/src/dm/dt/interface/dtds.c /petsc/src/dm/dt/interface/dtweakform.c /petsc/src/dm/dt/interface/makefile plex.c plexfem.c tests/ex5.c tests/output/ex5_hex_0.out tests/output/ex5_hex_1.out tests/output/ex5_hex_t1_0.out tests/output/ex5_hex_t2_0.out tests/output/ex5_quad_0.out tests/output/ex5_quad_1.out tests/output/ex5_quad_t1_0.out tests/output/ex5_tet_0.out tests/output/ex5_tet_1.out tests/output/ex5_tet_t1_0.out tests/output/ex5_tri_0.out tests/output/ex5_tri_1.out tests/output/ex5_tri_t1_0.out /petsc/src/dm/interface/dlregisdmdm.c /petsc/src/docs/sphinx_docs/manual/index.rst /petsc/src/docs/sphinx_docs/manual/programming.rst /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/ksp/impls/hpddm/hpddm.cxx /petsc/src/ksp/ksp/tutorials/ex76.c /petsc/src/ksp/pc/impls/asm/asm.c /petsc/src/ksp/pc/impls/hpddm/hpddm.cxx /petsc/src/ksp/pc/impls/hypre/hypre.c /petsc/src/mat/color/interface/matcoloring.c /petsc/src/mat/interface/matrix.c /petsc/src/snes/tutorials/ex23.c /petsc/src/snes/utils/dmplexsnes.c /petsc/src/sys/classes/viewer/interface/dlregispetsc.c /petsc/src/sys/dll/dlimpl.c /petsc/src/sys/dll/reg.c /petsc/src/tao/interface/dlregistao.c /petsc/src/tao/tutorials/ex3.c /petsc/src/ts/impls/glee/glee.c /petsc/src/ts/tutorials/network/wash/pipes1.c /petsc/src/ts/utils/dmplexts.c /petsc/src/vec/is/sf/interface/sf.c /petsc/src/vec/is/utils/isltog.c
6528b96d	25-Jan-2021	Matthew G. Knepley <knepley@gmail.com>	Plex+DS: Moved management of pointwise functions into PetscWeakForm object - Added PetscChunkBuffer to manage contiguous buffer space - WeakForm can index functions by Label/val, field - WeakForm Plex+DS: Moved management of pointwise functions into PetscWeakForm object - Added PetscChunkBuffer to manage contiguous buffer space - WeakForm can index functions by Label/val, field - WeakForm allows multiple kernels per key show more ... /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/bamg.py /petsc/config/BuildSystem/config/packages/blis.py /petsc/config/BuildSystem/config/packages/cuda.py /petsc/config/BuildSystem/config/packages/hpddm.py /petsc/config/BuildSystem/config/packages/kokkos-kernels.py /petsc/config/BuildSystem/config/packages/kokkos.py /petsc/config/BuildSystem/config/packages/mpi4py.py 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/petsc/src/tao/unconstrained/tutorials/output/minsurf2_2.out /petsc/src/ts/tests/ex26.c /petsc/src/ts/tests/output/ex21_2_bdf_ngmres_fas_ms.out /petsc/src/ts/tests/output/ex21_2_bdf_ngmres_fas_ngs.out /petsc/src/ts/tutorials/output/ex11_glvis_adv_2d_quad.out /petsc/src/ts/tutorials/output/ex11_glvis_adv_2d_tet.out /petsc/src/ts/tutorials/output/ex12_glvis_da_2d_vect.out /petsc/src/ts/tutorials/output/ex12_glvis_da_2d_vect_ll.out /petsc/src/vec/is/sf/makefile /petsc/src/vec/is/sf/tutorials/ex1f.F90 /petsc/src/vec/is/sf/tutorials/makefile /petsc/src/vec/vec/tests/ex32f.F
772fcec0	19-Mar-2021	Matthew G. Knepley <knepley@gmail.com>	Plex: Properly handle coordinate field during backend copy /petsc/config/BuildSystem/config/packages/slepc.py /petsc/config/BuildSystem/config/setCompilers.py plexcreate.c /petsc/src/docs/tex/petsc.bib
626924cb	18-Mar-2021	Satish Balay <balay@mcs.anl.gov>	Merge remote-tracking branch 'origin/release' /petsc/config/BuildSystem/config/packages/PTScotch.py /petsc/lib/petsc/bin/maint/builddist /petsc/lib/petsc/bin/maint/createpatch /petsc/lib/petsc/bin/maint/generatefortranstubs.py /petsc/lib/petsc/bin/maint/rebuildtar /petsc/lib/petsc/bin/maint/xclude /petsc/makefile /petsc/src/dm/f90-mod/petscdm.h90 /petsc/src/dm/f90-mod/petscdmcomposite.h90 /petsc/src/dm/f90-mod/petscdmda.h90 /petsc/src/dm/f90-mod/petscdmdamod.F90 /petsc/src/dm/f90-mod/petscdmlabel.h90 /petsc/src/dm/f90-mod/petscdmmod.F90 /petsc/src/dm/f90-mod/petscdmplex.h90 /petsc/src/dm/f90-mod/petscdmplexmod.F90 /petsc/src/dm/f90-mod/petscdmswarm.h90 /petsc/src/dm/f90-mod/petscdt.h90 plex.c /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/f90-mod/petscksp.h90 /petsc/src/ksp/f90-mod/petsckspdefmod.F90 /petsc/src/ksp/f90-mod/petsckspmod.F90 /petsc/src/ksp/f90-mod/petscpc.h90 /petsc/src/ksp/f90-mod/petscpcmod.F90 /petsc/src/ksp/pc/impls/hypre/hypre.c /petsc/src/mat/f90-mod/petscmat.h90 /petsc/src/mat/f90-mod/petscmatmod.F90 /petsc/src/mat/impls/dense/seq/dense.c /petsc/src/snes/f90-mod/petscsnes.h90 /petsc/src/snes/f90-mod/petscsnesmod.F90 /petsc/src/snes/utils/dmplexsnes.c /petsc/src/sys/f90-mod/petscsys.h90 /petsc/src/sys/f90-mod/petscsysmod.F90 /petsc/src/sys/f90-mod/petscviewer.h90 /petsc/src/sys/objects/optionsyaml.c /petsc/src/sys/tests/ex47-multidoc.yaml /petsc/src/sys/tests/ex47.c /petsc/src/sys/tests/output/ex47_3_multidoc.out /petsc/src/tao/f90-mod/petsctaomod.F90 /petsc/src/ts/f90-mod/petsctsmod.F90 /petsc/src/ts/tutorials/ex77.c /petsc/src/vec/f90-mod/petscis.h90 /petsc/src/vec/f90-mod/petscvec.h90 /petsc/src/vec/f90-mod/petscvecmod.F90
2464107a	26-Feb-2021	ksagiyam <k.sagiyama@imperial.ac.uk>	refactor DMPlexBuildFromCellListParallel /petsc/config/BuildSystem/config/base.py /petsc/config/BuildSystem/config/compile/HIP.py /petsc/config/BuildSystem/config/compilerFlags.py /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/compilersFortran.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/hip.py /petsc/config/BuildSystem/config/packages/kokkos-kernels.py /petsc/config/BuildSystem/config/packages/kokkos.py /petsc/config/BuildSystem/config/packages/valgrind.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/PETSc/Configure.py /petsc/config/examples/arch-ci-linux-hip-double.py /petsc/config/examples/arch-olcf-frontier-hip-beta.py /petsc/gmakefile /petsc/gmakefile.test /petsc/include/petscdm.h /petsc/include/petscsf.h /petsc/include/petscts.h /petsc/lib/petsc/conf/test /petsc/src/dm/impls/network/network.c plexcreate.c /petsc/src/dm/impls/swarm/swarm.c /petsc/src/dm/interface/dm.c /petsc/src/docs/manualpages-sec/header_SF /petsc/src/docs/sphinx_docs/ext/html5_petsc.py /petsc/src/docs/sphinx_docs/guides/meshing/guide_to_subsurface.rst /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/ksp/interface/iterativ.c /petsc/src/ksp/ksp/tests/makefile /petsc/src/snes/interface/snes.c /petsc/src/snes/tests/ex2.c /petsc/src/snes/tutorials/ex63.c /petsc/src/snes/utils/dmplexsnes.c /petsc/src/ts/event/tsevent.c /petsc/src/ts/impls/implicit/sundials/makefile /petsc/src/ts/impls/implicit/sundials/sundials.h /petsc/src/ts/interface/tsregall.c /petsc/src/ts/tests/ex3.c /petsc/src/ts/tutorials/ex20td.c /petsc/src/ts/tutorials/ex4.c /petsc/src/ts/tutorials/ex77.c /petsc/src/ts/tutorials/makefile /petsc/src/ts/tutorials/output/ex77_2d_tri_p2_p1_p1_exit.out /petsc/src/ts/tutorials/power_grid/makefile /petsc/src/vec/is/sf/tests/ex16.c /petsc/src/vec/is/sf/tests/makefile /petsc/src/vec/is/sf/tests/output/ex16_0.out /petsc/src/vec/is/sf/tests/output/ex16_1.out /petsc/src/vec/is/sf/tests/output/ex16_2.out /petsc/src/vec/is/sf/utils/sfutils.c /petsc/src/vec/vec/tests/makefile
326b8f31	17-Mar-2021	Matthew G. Knepley <knepley@gmail.com>	DM: Uninitialized variable in anchor calculation /petsc/config/BuildSystem/config/packages/PTScotch.py /petsc/config/BuildSystem/config/packages/SuiteSparse.py /petsc/config/BuildSystem/config/packages/cuda.py /petsc/config/BuildSystem/config/packages/hpddm.py /petsc/config/BuildSystem/config/packages/mkl_sparse.py plex.c /petsc/src/dm/impls/stag/stag3d.c /petsc/src/ksp/pc/impls/asm/asm.c /petsc/src/ksp/pc/impls/shell/shellpc.c /petsc/src/vec/vec/tests/makefile
31867c9b	13-Mar-2021	Satish Balay <balay@mcs.anl.gov>	Merge branch 'tisaac/feature-dm-interpolate-solution' into 'main' Total solution interpolation See merge request petsc/petsc!3700 /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/packages/hpddm.py /petsc/config/BuildSystem/config/packages/mkl_sparse.py /petsc/include/petscdm.h /petsc/include/petscmath.h /petsc/include/petscsnes.h /petsc/lib/petsc/conf/rules /petsc/src/binding/petsc4py/src/PETSc/Log.pyx plex.c plexcreate.c plexfem.c /petsc/src/dm/impls/stag/stag3d.c /petsc/src/dm/interface/dm.c /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/pc/impls/asm/asm.c /petsc/src/snes/impls/fas/fas.c /petsc/src/snes/impls/fas/fasfunc.c /petsc/src/snes/impls/fas/fasimpls.h /petsc/src/snes/tutorials/ex13.c /petsc/src/snes/tutorials/output/ex13_2d_p1_fas_full.out /petsc/src/snes/tutorials/output/ex13_2d_p1_fas_full_homogeneous.out /petsc/src/ts/tutorials/advection-diffusion-reaction/ex5.c /petsc/src/ts/tutorials/advection-diffusion-reaction/ex5adj.c /petsc/src/ts/tutorials/advection-diffusion-reaction/ex5opt_ic.c /petsc/src/ts/tutorials/autodiff/adr_ex5adj.cxx /petsc/src/ts/tutorials/autodiff/adr_ex5adj_mf.cxx
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