History log of /petsc/src/dm/impls/plex/ (Results 1701 – 1725 of 5874)
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8457c76101-Sep-2020 Matthew G. Knepley <knepley@gmail.com>

Plex: Exclude FV ghost cells from Triangle refinement


generators/triangle/trigenerate.c
250712c901-Sep-2020 Matthew G. Knepley <knepley@gmail.com>

Plex: More options when creating a mesh


/petsc/.gitlab-ci.yml
/petsc/config/BuildSystem/config/packages/SuperLU.py
/petsc/config/BuildSystem/config/packages/SuperLU_DIST.py
/petsc/config/BuildSystem/config/packages/concurrencykit.py
/petsc/config/BuildSystem/config/packages/hpddm.py
/petsc/config/BuildSystem/config/packages/med.py
/petsc/config/BuildSystem/config/packages/p4est.py
/petsc/config/BuildSystem/config/packages/tetgen.py
/petsc/config/BuildSystem/config/packages/viennacl.py
/petsc/config/examples/arch-ci-linux-c-exodus-dbg.py
/petsc/config/examples/arch-ci-linux-viennacl-cuda.py
plexcreate.c
/petsc/src/ksp/ksp/interface/ftn-custom/zitfuncf.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/tutorials/ex1f.F90
/petsc/src/ksp/ksp/tutorials/ex77.c
/petsc/src/ksp/ksp/tutorials/output/ex1f_1.out
/petsc/src/ksp/ksp/tutorials/output/ex1f_1_alt.out
/petsc/src/ksp/ksp/tutorials/output/ex1f_1_alt_2.out
/petsc/src/ksp/ksp/tutorials/output/ex77_deflation.out
/petsc/src/mat/partition/impls/chaco/chaco.c
/petsc/src/mat/partition/impls/party/party.c
/petsc/src/snes/interface/ftn-custom/zsnesf.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/tutorials/ex13.c
/petsc/src/snes/tutorials/ex1f.F90
/petsc/src/snes/tutorials/output/ex13_2d_p1_conv.out
/petsc/src/snes/tutorials/output/ex13_2d_p1_gmg_fcycle.out
/petsc/src/snes/tutorials/output/ex13_2d_p1_gmg_vcycle.out
/petsc/src/snes/tutorials/output/ex13_2d_p1_gmg_vcycle_adapt.out
/petsc/src/snes/tutorials/output/ex13_2d_p1_scalable.out
/petsc/src/snes/tutorials/output/ex13_2d_p2_conv.out
/petsc/src/snes/tutorials/output/ex13_2d_p3_conv.out
/petsc/src/snes/tutorials/output/ex13_2d_q1_conv.out
/petsc/src/snes/tutorials/output/ex13_2d_q1_shear_conv.out
/petsc/src/snes/tutorials/output/ex13_2d_q2_conv.out
/petsc/src/snes/tutorials/output/ex13_2d_q2_shear_conv.out
/petsc/src/snes/tutorials/output/ex13_2d_q3_conv.out
/petsc/src/snes/tutorials/output/ex13_2d_q3_shear_conv.out
/petsc/src/snes/tutorials/output/ex13_3d_p1_conv.out
/petsc/src/snes/tutorials/output/ex13_3d_p2_conv.out
/petsc/src/snes/tutorials/output/ex13_3d_p3_conv.out
/petsc/src/snes/tutorials/output/ex13_3d_q1_conv.out
/petsc/src/snes/tutorials/output/ex13_3d_q2_conv.out
/petsc/src/snes/tutorials/output/ex13_3d_q3_conv.out
/petsc/src/snes/tutorials/output/ex1f_1.out
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/vec/is/is/impls/block/block.c
/petsc/src/vec/is/is/impls/general/general.c
/petsc/src/vec/is/tests/ex4f.F90
/petsc/src/vec/is/tests/makefile
/petsc/src/vec/is/tests/output/ex4f_1.out
/petsc/src/vec/vec/impls/mpi/mpicuda/mpicuda.cu
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda.c
/petsc/src/vec/vec/tests/ex1.c
/petsc/src/vec/vec/tests/ex100.cu
/petsc/src/vec/vec/tests/makefile
/petsc/src/vec/vec/tests/output/ex100_1.out
/petsc/src/vec/vec/tests/output/ex100_2.out
/petsc/src/vec/vec/tests/output/ex100_3.out
/petsc/src/vec/vec/tests/output/ex100_4.out
/petsc/src/vec/vec/tests/output/ex100_5.out
/petsc/src/vec/vec/tests/output/ex100_6.out
5f9348a401-Sep-2020 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

DMPlexCreateBoxMesh manpage: add missing options


/petsc/.gitlab-ci.yml
/petsc/config/BuildSystem/config/packages/SuperLU.py
/petsc/config/BuildSystem/config/packages/SuperLU_DIST.py
/petsc/config/BuildSystem/config/packages/concurrencykit.py
/petsc/config/BuildSystem/config/packages/hpddm.py
/petsc/config/BuildSystem/config/packages/med.py
/petsc/config/BuildSystem/config/packages/p4est.py
/petsc/config/BuildSystem/config/packages/tetgen.py
/petsc/config/BuildSystem/config/packages/viennacl.py
/petsc/config/examples/arch-ci-linux-c-exodus-dbg.py
/petsc/config/examples/arch-ci-linux-viennacl-cuda.py
plexcreate.c
/petsc/src/ksp/ksp/interface/ftn-custom/zitfuncf.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/tutorials/ex1f.F90
/petsc/src/ksp/ksp/tutorials/ex77.c
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/petsc/src/ksp/ksp/tutorials/output/ex1f_1_alt.out
/petsc/src/ksp/ksp/tutorials/output/ex1f_1_alt_2.out
/petsc/src/ksp/ksp/tutorials/output/ex77_deflation.out
/petsc/src/mat/partition/impls/chaco/chaco.c
/petsc/src/mat/partition/impls/party/party.c
/petsc/src/snes/interface/ftn-custom/zsnesf.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/tutorials/ex1f.F90
/petsc/src/snes/tutorials/output/ex1f_1.out
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/vec/is/is/impls/block/block.c
/petsc/src/vec/is/is/impls/general/general.c
/petsc/src/vec/is/tests/ex4f.F90
/petsc/src/vec/is/tests/makefile
/petsc/src/vec/is/tests/output/ex4f_1.out
/petsc/src/vec/vec/impls/mpi/mpicuda/mpicuda.cu
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda.c
/petsc/src/vec/vec/tests/ex1.c
/petsc/src/vec/vec/tests/ex100.cu
/petsc/src/vec/vec/tests/makefile
/petsc/src/vec/vec/tests/output/ex100_1.out
/petsc/src/vec/vec/tests/output/ex100_2.out
/petsc/src/vec/vec/tests/output/ex100_3.out
/petsc/src/vec/vec/tests/output/ex100_4.out
/petsc/src/vec/vec/tests/output/ex100_5.out
/petsc/src/vec/vec/tests/output/ex100_6.out
c31b27b829-Aug-2020 Satish Balay <balay@mcs.anl.gov>

Merge branch 'stefanozampini/fix-plex-physical-localization' into 'maint'

fix plex physical localization

See merge request petsc/petsc!3103


tests/ex1.c
/petsc/src/dm/interface/dm.c
b85c8bf929-Aug-2020 Matthew G. Knepley <knepley@gmail.com>

Plex: Check for NULL pointIS Reported-by: "Ashish Patel" <ashish.patel@onscale.com>


/petsc/.gitlab-alcf-ci.yml
/petsc/.gitlab-ci.yml
/petsc/.gitlab/CODEOWNERS
/petsc/config/BuildSystem/config/base.py
/petsc/config/BuildSystem/config/compilerFlags.py
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/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/SuperLU.py
/petsc/config/BuildSystem/config/packages/SuperLU_DIST.py
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/petsc/config/BuildSystem/config/packages/med.py
/petsc/config/BuildSystem/config/packages/p4est.py
/petsc/config/BuildSystem/config/packages/pragmatic.py
/petsc/config/BuildSystem/config/packages/slepc.py
/petsc/config/BuildSystem/config/packages/tetgen.py
/petsc/config/PETSc/options/libraryOptions.py
/petsc/config/examples/arch-alcfci-theta-cray-opt.py
/petsc/config/examples/arch-alcfci-theta-intel-opt.py
/petsc/config/examples/arch-ci-linux-opt-misc.py
/petsc/config/petsc_harness.sh
/petsc/config/query_tests.py
/petsc/gmakefile.test
/petsc/include/petsc/finclude/petscis.h
/petsc/include/petsc/private/cudavecimpl.h
/petsc/include/petsc/private/sfimpl.h
/petsc/include/petsc/private/taoimpl.h
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/petsc/src/dm/impls/moab/dmmbfem.cxx
/petsc/src/dm/impls/network/makefile
/petsc/src/dm/impls/network/network.c
plexsubmesh.c
/petsc/src/docs/manualpages-sec/header_FV
/petsc/src/docs/manualpages-sec/header_SNES
/petsc/src/docs/tex/manual/part1.tex
/petsc/src/docs/website/documentation/faq.html
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/petsc/src/ksp/ksp/impls/cg/pipecgrr/pipecgrr.c
/petsc/src/ksp/ksp/impls/cg/stcg/stcg.c
/petsc/src/ksp/ksp/tests/ex40.c
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/petsc/src/ksp/ksp/tutorials/ex2.c
/petsc/src/ksp/ksp/tutorials/ex4.c
/petsc/src/ksp/ksp/tutorials/ex52.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/deflation/deflation.c
/petsc/src/ksp/pc/impls/lsc/lsc.c
/petsc/src/ksp/pc/tutorials/ex3.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
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/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aijfact.c
/petsc/src/mat/impls/aij/seq/aijmkl/aijmkl.c
/petsc/src/mat/impls/aij/seq/inode.c
/petsc/src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h
/petsc/src/mat/impls/baij/seq/baij2.c
/petsc/src/mat/impls/baij/seq/baijfact.c
/petsc/src/mat/impls/baij/seq/baijfact11.c
/petsc/src/mat/impls/baij/seq/baijfact13.c
/petsc/src/mat/impls/baij/seq/baijfact2.c
/petsc/src/mat/impls/baij/seq/baijfact5.c
/petsc/src/mat/impls/baij/seq/baijfact7.c
/petsc/src/mat/impls/baij/seq/baijfact9.c
/petsc/src/mat/impls/baij/seq/baijsolv.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/seq/cuda/densecuda.cu
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/kaij/kaij.c
/petsc/src/mat/impls/maij/maij.c
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/petsc/src/mat/interface/matrix.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/tutorials/ex46.c
/petsc/src/snes/tutorials/ex58.c
/petsc/src/sys/error/signal.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/tests/ex26.c
/petsc/src/tao/bound/impls/bncg/bncg.c
/petsc/src/tao/bound/impls/bnk/bnk.c
/petsc/src/tao/bound/tutorials/jbearing2.c
/petsc/src/tao/bound/tutorials/plate2.c
/petsc/src/tao/complementarity/tutorials/blackscholes.c
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/petsc/src/tao/complementarity/tutorials/output/minsurf1_2_alt.out
/petsc/src/tao/constrained/impls/ipm/pdipm.c
/petsc/src/tao/constrained/tutorials/ex1.c
/petsc/src/tao/constrained/tutorials/output/ex1_3.out
/petsc/src/tao/constrained/tutorials/output/ex1_4.out
/petsc/src/tao/interface/taosolver.c
/petsc/src/tao/interface/taosolver_bounds.c
/petsc/src/tao/leastsquares/tutorials/cs1.c
/petsc/src/tao/leastsquares/tutorials/output/cs1_2.out
/petsc/src/tao/leastsquares/tutorials/tomography.c
/petsc/src/tao/linesearch/interface/taolinesearch.c
/petsc/src/tao/unconstrained/tutorials/eptorsion1.c
/petsc/src/tao/unconstrained/tutorials/minsurf1.c
/petsc/src/tao/unconstrained/tutorials/minsurf2.c
/petsc/src/tao/unconstrained/tutorials/rosenbrock1.c
/petsc/src/tao/unconstrained/tutorials/rosenbrock2.c
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/tutorials/advection-diffusion-reaction/ex5.c
/petsc/src/ts/tutorials/advection-diffusion-reaction/ex5adj.c
/petsc/src/ts/tutorials/advection-diffusion-reaction/ex5opt_ic.c
/petsc/src/ts/tutorials/autodiff/adr_ex5adj.cxx
/petsc/src/ts/tutorials/autodiff/adr_ex5adj_mf.cxx
/petsc/src/ts/tutorials/ex27.c
/petsc/src/vec/is/is/utils/iscoloring.c
/petsc/src/vec/vec/impls/mpi/mpicuda/mpicuda.cu
/petsc/src/vec/vec/impls/seq/seqcuda/makefile
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda.c
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu
/petsc/src/vec/vec/impls/seq/seqcuda/vecscattercuda.cu
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/tests/ex51.c
/petsc/src/vec/vec/tests/makefile
/petsc/src/vec/vec/tests/output/ex51_1.out
/petsc/src/vec/vec/tests/output/ex51_2.out
/petsc/src/vec/vscat/impls/seq/seqvscat.c
/petsc/src/vec/vscat/impls/sf/vscatsf.c
/petsc/src/vec/vscat/impls/vscat.c
/petsc/src/vec/vscat/interface/vscatfce.c
b83bf3d728-Aug-2020 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

configure tetgen: Improve/fix TETLIBRARY macro handling.

* define TETLIBRARY in tetgenerate.cxx
- only if detected as not yet defined during configure
* no manipulation of header file needed
* sup

configure tetgen: Improve/fix TETLIBRARY macro handling.

* define TETLIBRARY in tetgenerate.cxx
- only if detected as not yet defined during configure
* no manipulation of header file needed
* support preinstalled tetgen with original header file
- with #define TETLIBRARY commented out
- e.g. conda install tetgen

show more ...


/petsc/config/BuildSystem/config/packages/tetgen.py
/petsc/include/makefile
/petsc/include/petsc/private/makefile
/petsc/include/petscdmplex.h
/petsc/include/petscksp.h
/petsc/include/petsclandau.h
/petsc/include/petscmat.h
/petsc/include/petscsnes.h
/petsc/lib/petsc/conf/rules
/petsc/src/dm/impls/da/fdda.c
generators/tetgen/tetgenerate.cxx
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/ksp/impls/gmres/borthog.c
/petsc/src/ksp/ksp/impls/gmres/borthog2.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/tests/ex51.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/snes/interface/snes.c
/petsc/src/sys/objects/cupminit.inc
/petsc/src/ts/utils/dmplexlandau/cuda/landaucu.cu
/petsc/src/ts/utils/dmplexlandau/cuda/makefile
/petsc/src/ts/utils/dmplexlandau/ftn-custom/makefile
/petsc/src/ts/utils/dmplexlandau/ftn-custom/zlandaucreate.c
/petsc/src/ts/utils/dmplexlandau/kokkos/landau.kokkos.cxx
/petsc/src/ts/utils/dmplexlandau/kokkos/makefile
/petsc/src/ts/utils/dmplexlandau/land_kernel.h
/petsc/src/ts/utils/dmplexlandau/land_tensors.h
/petsc/src/ts/utils/dmplexlandau/makefile
/petsc/src/ts/utils/dmplexlandau/plexland.c
/petsc/src/ts/utils/dmplexlandau/tutorials/ex1.c
/petsc/src/ts/utils/dmplexlandau/tutorials/ex1f90.F90
/petsc/src/ts/utils/dmplexlandau/tutorials/ex2.c
/petsc/src/ts/utils/dmplexlandau/tutorials/makefile
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex1_0.out
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex1f90_0.out
/petsc/src/ts/utils/dmplexlandau/tutorials/output/ex2_0.out
/petsc/src/ts/utils/makefile
db2bf62e27-Aug-2020 Stefano Zampini <stefano.zampini@gmail.com>

DM: fix coordinate localization in physical space

The maxCell business is not robust at all wrt refinements.
This was already fixed, but reintroduced here 412e9a14abb


/petsc/.gitlab-alcf-ci.yml
/petsc/.gitlab-ci.yml
/petsc/.gitlab/CODEOWNERS
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/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
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/petsc/src/ksp/pc/impls/lsc/lsc.c
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/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpicusparse/mpicusparsematimpl.h
/petsc/src/mat/impls/aij/mpi/mpiptap.c
/petsc/src/mat/impls/aij/seq/aij.c
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/petsc/src/mat/impls/aij/seq/aijmkl/aijmkl.c
/petsc/src/mat/impls/aij/seq/inode.c
/petsc/src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h
/petsc/src/mat/impls/baij/seq/baij2.c
/petsc/src/mat/impls/baij/seq/baijfact.c
/petsc/src/mat/impls/baij/seq/baijfact11.c
/petsc/src/mat/impls/baij/seq/baijfact13.c
/petsc/src/mat/impls/baij/seq/baijfact2.c
/petsc/src/mat/impls/baij/seq/baijfact5.c
/petsc/src/mat/impls/baij/seq/baijfact7.c
/petsc/src/mat/impls/baij/seq/baijfact9.c
/petsc/src/mat/impls/baij/seq/baijsolv.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/seq/cuda/densecuda.cu
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/kaij/kaij.c
/petsc/src/mat/impls/maij/maij.c
/petsc/src/mat/impls/sbaij/seq/relax.h
/petsc/src/mat/impls/sbaij/seq/sbaij2.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/tutorials/ex46.c
/petsc/src/snes/tutorials/ex58.c
/petsc/src/sys/error/signal.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/tests/ex26.c
/petsc/src/tao/bound/impls/bncg/bncg.c
/petsc/src/tao/bound/impls/bnk/bnk.c
/petsc/src/tao/bound/tutorials/jbearing2.c
/petsc/src/tao/bound/tutorials/plate2.c
/petsc/src/tao/complementarity/tutorials/blackscholes.c
/petsc/src/tao/complementarity/tutorials/output/minsurf1_1.out
/petsc/src/tao/complementarity/tutorials/output/minsurf1_2.out
/petsc/src/tao/complementarity/tutorials/output/minsurf1_2_alt.out
/petsc/src/tao/constrained/impls/ipm/pdipm.c
/petsc/src/tao/constrained/tutorials/ex1.c
/petsc/src/tao/constrained/tutorials/output/ex1_3.out
/petsc/src/tao/constrained/tutorials/output/ex1_4.out
/petsc/src/tao/interface/taosolver.c
/petsc/src/tao/interface/taosolver_bounds.c
/petsc/src/tao/leastsquares/tutorials/cs1.c
/petsc/src/tao/leastsquares/tutorials/output/cs1_2.out
/petsc/src/tao/leastsquares/tutorials/tomography.c
/petsc/src/tao/linesearch/interface/taolinesearch.c
/petsc/src/tao/unconstrained/tutorials/eptorsion1.c
/petsc/src/tao/unconstrained/tutorials/minsurf1.c
/petsc/src/tao/unconstrained/tutorials/minsurf2.c
/petsc/src/tao/unconstrained/tutorials/rosenbrock1.c
/petsc/src/tao/unconstrained/tutorials/rosenbrock2.c
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/tutorials/advection-diffusion-reaction/ex5.c
/petsc/src/ts/tutorials/advection-diffusion-reaction/ex5adj.c
/petsc/src/ts/tutorials/advection-diffusion-reaction/ex5opt_ic.c
/petsc/src/ts/tutorials/autodiff/adr_ex5adj.cxx
/petsc/src/ts/tutorials/autodiff/adr_ex5adj_mf.cxx
/petsc/src/ts/tutorials/ex27.c
/petsc/src/vec/is/is/utils/iscoloring.c
/petsc/src/vec/vec/impls/mpi/mpicuda/mpicuda.cu
/petsc/src/vec/vec/impls/seq/seqcuda/makefile
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda.c
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu
/petsc/src/vec/vec/impls/seq/seqcuda/vecscattercuda.cu
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/tests/ex51.c
/petsc/src/vec/vec/tests/makefile
/petsc/src/vec/vec/tests/output/ex51_1.out
/petsc/src/vec/vec/tests/output/ex51_2.out
/petsc/src/vec/vscat/impls/seq/seqvscat.c
/petsc/src/vec/vscat/impls/sf/vscatsf.c
/petsc/src/vec/vscat/impls/vscat.c
/petsc/src/vec/vscat/interface/vscatfce.c
ee30046326-Aug-2020 Satish Balay <balay@mcs.anl.gov>

doc: fix build errors


/petsc/config/BuildSystem/config/packages/slepc.py
/petsc/config/BuildSystem/config/packages/sowing.py
/petsc/src/dm/dt/fe/interface/fe.c
/petsc/src/dm/f90-mod/makefile
/petsc/src/dm/impls/network/network.c
plexcreate.c
/petsc/src/ksp/pc/impls/hara/pchara.cu
/petsc/src/ksp/pc/impls/mg/mgadapt.c
/petsc/src/mat/impls/hara/mathara.cu
/petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/utils/convest.c
/petsc/src/sys/error/fp.c
/petsc/src/ts/adapt/interface/tsadapt.c
/petsc/src/ts/tutorials/ex1.c
/petsc/src/ts/tutorials/ex1f.F
/petsc/src/ts/tutorials/ex20opt_ic.c
/petsc/src/ts/tutorials/ex20opt_p.c
/petsc/src/ts/tutorials/makefile
/petsc/src/vec/vec/tests/makefile
ee90678e26-Aug-2020 Satish Balay <balay@mcs.anl.gov>

Merge branch 'knepley/feature-plex-adaptive-interpolation' into 'master'

Knepley/feature plex adaptive interpolation

See merge request petsc/petsc!3018


/petsc/.gitlab-ci.yml
/petsc/config/BuildSystem/config/packages/bamg.py
/petsc/config/BuildSystem/config/packages/slepc.py
/petsc/config/examples/arch-ci-linux-pkgs-opt.py
/petsc/include/petsc/private/dmimpl.h
/petsc/include/petsc/private/kspimpl.h
/petsc/include/petsc/private/matimpl.h
/petsc/include/petsc/private/pcimpl.h
/petsc/include/petsc/private/pcmgimpl.h
/petsc/include/petscksp.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/include/petscpctypes.h
/petsc/include/petscsnes.h
/petsc/lib/petsc/bin/maint/fixinclude.py
/petsc/lib/petsc/bin/maint/gcov.py
/petsc/makefile
plex.c
/petsc/src/dm/interface/dlregisdmdm.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/sphinx_docs/manual/high_level_mg.rst
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/ksp/impls/cheby/cheby.c
/petsc/src/ksp/ksp/impls/preonly/preonly.c
/petsc/src/ksp/ksp/interface/dlregisksp.c
/petsc/src/ksp/ksp/interface/iterativ.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/tests/ex51.c
/petsc/src/ksp/ksp/tests/output/ex51_1.out
/petsc/src/ksp/ksp/tests/output/ex51_2.out
/petsc/src/ksp/ksp/tests/output/ex51_2_alt.out
/petsc/src/ksp/ksp/tests/output/ex51_2_alt_2.out
/petsc/src/ksp/ksp/tutorials/output/ex72_zeropivot.out
/petsc/src/ksp/ksp/tutorials/output/ex72_zeropivot_3.out
/petsc/src/ksp/ksp/utils/dmproject.c
/petsc/src/ksp/pc/impls/mg/makefile
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/mg/mgadapt.c
/petsc/src/ksp/pc/impls/mg/mgfunc.c
/petsc/src/ksp/pc/interface/pcset.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/tests/ex182.c
/petsc/src/mat/tutorials/ex7.c
/petsc/src/snes/tests/ex8.c
/petsc/src/snes/tests/output/ex69_4.out
/petsc/src/snes/tests/output/ex69_5.out
/petsc/src/snes/tests/output/ex8_p1_adapt_dim-2_porder-1.out
/petsc/src/snes/tests/output/ex8_p1_adapt_dim-2_porder-2.out
/petsc/src/snes/tests/output/ex8_p1_dim-2_porder-1.out
/petsc/src/snes/tests/output/ex8_p1_dim-2_porder-2.out
/petsc/src/snes/tests/output/ex8_p1_pragmatic_dim-2_porder-1.out
/petsc/src/snes/tests/output/ex8_p1_pragmatic_dim-2_porder-2.out
/petsc/src/snes/tests/output/ex8_p1d_dim-2_simplex-0_porder-1.out
/petsc/src/snes/tests/output/ex8_p1d_dim-2_simplex-0_porder-2.out
/petsc/src/snes/tests/output/ex8_p2_dim-2_porder-1.out
/petsc/src/snes/tests/output/ex8_p2_dim-2_porder-2.out
/petsc/src/snes/tests/output/ex8_p2_dim-2_porder-3.out
/petsc/src/snes/tests/output/ex8_p2_pragmatic_dim-2_porder-1.out
/petsc/src/snes/tests/output/ex8_p2_pragmatic_dim-2_porder-2.out
/petsc/src/snes/tests/output/ex8_p2_pragmatic_dim-2_porder-3.out
/petsc/src/snes/tests/output/ex8_p3_dim-2_porder-1.out
/petsc/src/snes/tests/output/ex8_p3_dim-2_porder-2.out
/petsc/src/snes/tests/output/ex8_p3_dim-2_porder-3.out
/petsc/src/snes/tests/output/ex8_p3_dim-2_porder-4.out
/petsc/src/snes/tests/output/ex8_p3_pragmatic_dim-2_porder-1.out
/petsc/src/snes/tests/output/ex8_p3_pragmatic_dim-2_porder-2.out
/petsc/src/snes/tests/output/ex8_p3_pragmatic_dim-2_porder-3.out
/petsc/src/snes/tests/output/ex8_p3_pragmatic_dim-2_porder-4.out
/petsc/src/snes/tests/output/ex8_q1_dim-2_porder-1.out
/petsc/src/snes/tests/output/ex8_q1_dim-2_porder-2.out
/petsc/src/snes/tests/output/ex8_q1_dim-3_porder-1.out
/petsc/src/snes/tests/output/ex8_q1_dim-3_porder-2.out
/petsc/src/snes/tests/output/ex8_q2_dim-2_porder-1.out
/petsc/src/snes/tests/output/ex8_q2_dim-2_porder-2.out
/petsc/src/snes/tests/output/ex8_q2_dim-2_porder-3.out
/petsc/src/snes/tests/output/ex8_q2_dim-3_porder-1.out
/petsc/src/snes/tests/output/ex8_q2_dim-3_porder-2.out
/petsc/src/snes/tests/output/ex8_q2_dim-3_porder-3.out
/petsc/src/snes/tests/output/ex8_q3_dim-2_porder-1.out
/petsc/src/snes/tests/output/ex8_q3_dim-2_porder-2.out
/petsc/src/snes/tests/output/ex8_q3_dim-2_porder-3.out
/petsc/src/snes/tests/output/ex8_q3_dim-2_porder-4.out
/petsc/src/snes/tests/output/ex8_q3_dim-3_porder-1.out
/petsc/src/snes/tests/output/ex8_q3_dim-3_porder-2.out
/petsc/src/snes/tests/output/ex8_q3_dim-3_porder-3.out
/petsc/src/snes/tests/output/ex8_q3_dim-3_porder-4.out
/petsc/src/snes/tutorials/ex12.c
/petsc/src/snes/tutorials/ex13.c
/petsc/src/snes/tutorials/output/ex12_2d_p1_adaptmg_0.out
/petsc/src/snes/tutorials/output/ex12_2d_p1_adaptmg_1.out
/petsc/src/snes/tutorials/output/ex13_2d_p1_gmg_vcycle_adapt.out
/petsc/src/snes/tutorials/output/ex22_1_alt_3.out
/petsc/src/sys/dll/reg.c
/petsc/src/sys/memory/mtr.c
89c010cf23-Aug-2020 Barry Smith <bsmith@mcs.anl.gov>

Fix some %d that should be %D
Fix some source code style

Commit-type: style-fix
/spend 15m


plexadapt.c
plexcreate.c
plexhdf5xdmf.c
/petsc/src/ksp/pc/impls/asm/asm.c
2da392cc17-Aug-2020 Barry Smith <bsmith@mcs.anl.gov>

Turn on checkbadSource test to generate an error when found; fix all source code that causes errors

Commit-type: portability-fix, testing-fix, style-fix, feature, maintainability
/spend 1.5h


/petsc/.gitlab-alcf-ci.yml
/petsc/.gitlab-ci.yml
/petsc/.gitlab/CODEOWNERS
/petsc/include/petsc/private/fortranimpl.h
/petsc/include/petsc/private/hashtable.h
/petsc/include/petsc/private/kspimpl.h
/petsc/include/petsc/private/logimpl.h
/petsc/include/petsc/private/matimpl.h
/petsc/include/petsc/private/petscimpl.h
/petsc/include/petsc/private/taolinesearchimpl.h
/petsc/include/petsc/private/vecimpl.h
/petsc/include/petscbag.h
/petsc/include/petscblaslapack.h
/petsc/include/petsccublas.h
/petsc/include/petscdm.h
/petsc/include/petscdmmoab.h
/petsc/include/petscdmnetwork.h
/petsc/include/petscdmplex.h
/petsc/include/petscdmswarm.h
/petsc/include/petscdraw.h
/petsc/include/petscerror.h
/petsc/include/petscksp.h
/petsc/include/petsclog.h
/petsc/include/petscmat.h
/petsc/include/petscmatcoarsen.h
/petsc/include/petscoptions.h
/petsc/include/petscpc.h
/petsc/include/petscsectiontypes.h
/petsc/include/petscsnes.h
/petsc/include/petscsys.h
/petsc/include/petsctao.h
/petsc/include/petsctime.h
/petsc/include/petscts.h
/petsc/include/petscvec.h
/petsc/include/petscviewer.h
/petsc/include/petscviewersaws.h
/petsc/lib/petsc/bin/maint/gcov.py
/petsc/lib/petsc/bin/maint/getexlist
/petsc/lib/petsc/conf/rules
/petsc/lib/petsc/conf/variables
/petsc/src/contrib/fun3d/comp/user.F
/petsc/src/contrib/fun3d/incomp/user.F
/petsc/src/contrib/fun3d/incomp/userJac.F
/petsc/src/dm/dt/fe/impls/opencl/feopencl.c
/petsc/src/dm/dt/fe/interface/fe.c
/petsc/src/dm/dt/space/impls/poly/spacepoly.c
/petsc/src/dm/dt/space/impls/sum/spacesum.c
/petsc/src/dm/dt/space/impls/tensor/spacetensor.c
/petsc/src/dm/dt/tests/ex10.c
/petsc/src/dm/dt/tests/ex6.c
/petsc/src/dm/field/impls/ds/dmfieldds.c
/petsc/src/dm/impls/da/da1.c
/petsc/src/dm/impls/da/da3.c
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/da/dadd.c
/petsc/src/dm/impls/da/dageometry.c
/petsc/src/dm/impls/da/dagetelem.c
/petsc/src/dm/impls/da/dasub.c
/petsc/src/dm/impls/da/ftn-custom/zdacornf.c
/petsc/src/dm/impls/da/ftn-custom/zdaghostf.c
/petsc/src/dm/impls/da/ftn-custom/zdaindexf.c
/petsc/src/dm/impls/da/ftn-custom/zdasubf.c
/petsc/src/dm/impls/da/gr2.c
/petsc/src/dm/impls/da/grglvis.c
/petsc/src/dm/impls/forest/p4est/pforest.c
/petsc/src/dm/impls/moab/dmmbfem.cxx
/petsc/src/dm/impls/moab/dmmbmg.cxx
/petsc/src/dm/impls/moab/dmmbutil.cxx
/petsc/src/dm/impls/moab/dmmbvec.cxx
/petsc/src/dm/impls/moab/tests/ex2.cxx
/petsc/src/dm/impls/moab/tests/ex3.cxx
/petsc/src/dm/impls/network/network.c
/petsc/src/dm/impls/network/networkcreate.c
/petsc/src/dm/impls/patch/patch.c
generators/ctetgen/ctetgenerate.c
generators/tetgen/tetgenerate.cxx
plex.c
plexcgns.c
plexcreate.c
plexdistribute.c
plexegads.c
plexfem.c
plexgeometry.c
plexgmsh.c
plexhdf5xdmf.c
plexpartition.c
plexrefine.c
plexsubmesh.c
tests/ex11.c
tests/ex18.c
tests/ex30.c
tests/ex31.c
tests/ex33.c
tests/ex36.c
tests/ex37.c
tests/ex39.c
tests/ex4.c
tests/ex5.c
tests/ex6.c
tests/ex7.c
tests/ex9.c
tutorials/ex5.c
/petsc/src/dm/impls/stag/stag.c
/petsc/src/dm/impls/stag/stag1d.c
/petsc/src/dm/impls/stag/stag2d.c
/petsc/src/dm/impls/stag/stag3d.c
/petsc/src/dm/impls/stag/stagda.c
/petsc/src/dm/impls/stag/stagstencil.c
/petsc/src/dm/impls/stag/stagutils.c
/petsc/src/dm/impls/stag/tests/ex2.c
/petsc/src/dm/impls/stag/tests/ex30.c
/petsc/src/dm/impls/stag/tests/ex7.c
/petsc/src/dm/impls/stag/tutorials/ex2.c
/petsc/src/dm/impls/stag/tutorials/ex3.c
/petsc/src/dm/impls/stag/tutorials/ex4.c
/petsc/src/dm/impls/stag/tutorials/ex6.c
/petsc/src/dm/impls/swarm/data_bucket.c
/petsc/src/dm/impls/swarm/data_bucket.h
/petsc/src/dm/impls/swarm/data_ex.c
/petsc/src/dm/impls/swarm/data_ex.h
/petsc/src/dm/impls/swarm/swarm_migrate.c
/petsc/src/dm/impls/swarm/swarmpic.c
/petsc/src/dm/impls/swarm/swarmpic_da.c
/petsc/src/dm/impls/swarm/swarmpic_sort.c
/petsc/src/dm/impls/swarm/swarmpic_view.c
/petsc/src/dm/impls/swarm/tests/ex2.c
/petsc/src/dm/impls/swarm/tests/ex5.c
/petsc/src/dm/impls/swarm/tests/ex6.c
/petsc/src/dm/label/ftn-custom/zdmlabel.c
/petsc/src/dm/partitioner/impls/parmetis/partparmetis.c
/petsc/src/dm/partitioner/impls/ptscotch/partptscotch.c
/petsc/src/dm/tests/ex1f.F90
/petsc/src/dm/tests/ex35.c
/petsc/src/dm/tests/ex40.c
/petsc/src/dm/tests/ex42.c
/petsc/src/dm/tests/ex5.c
/petsc/src/dm/tests/ex51.c
/petsc/src/dm/tutorials/ex1.c
/petsc/src/dm/tutorials/ex13f90.F90
/petsc/src/dm/tutorials/ex13f90aux.F90
/petsc/src/dm/tutorials/ex21.c
/petsc/src/dm/tutorials/ex6.c
/petsc/src/dm/tutorials/swarm_ex3.c
/petsc/src/docs/tao_tex/manual/rosenbrock1.c
/petsc/src/docs/website/documentation/faq.html
/petsc/src/ksp/ksp/guess/impls/pod/pod.c
/petsc/src/ksp/ksp/impls/bcgs/pipebcgs/pipebcgs.c
/petsc/src/ksp/ksp/impls/cg/cgls.c
/petsc/src/ksp/ksp/impls/cg/pipelcg/pipelcg.c
/petsc/src/ksp/ksp/impls/cr/cr.c
/petsc/src/ksp/ksp/impls/fcg/fcg.c
/petsc/src/ksp/ksp/impls/fcg/fcgimpl.h
/petsc/src/ksp/ksp/impls/fcg/pipefcg/pipefcg.c
/petsc/src/ksp/ksp/impls/fetidp/fetidp.c
/petsc/src/ksp/ksp/impls/gcr/pipegcr/pipegcr.c
/petsc/src/ksp/ksp/impls/gcr/pipegcr/pipegcrimpl.h
/petsc/src/ksp/ksp/impls/gmres/agmres/agmresorthog.c
/petsc/src/ksp/ksp/impls/gmres/fgmres/fgmres.c
/petsc/src/ksp/ksp/impls/gmres/gmreig.c
/petsc/src/ksp/ksp/impls/gmres/pipefgmres/pipefgmres.c
/petsc/src/ksp/ksp/impls/gmres/pipefgmres/pipefgmresimpl.h
/petsc/src/ksp/ksp/impls/tsirm/tsirm.c
/petsc/src/ksp/ksp/interface/ftn-custom/zitfuncf.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/ksp/ksp/tests/ex1.c
/petsc/src/ksp/ksp/tests/ex14.c
/petsc/src/ksp/ksp/tests/ex17.c
/petsc/src/ksp/ksp/tests/ex19.c
/petsc/src/ksp/ksp/tests/ex24.c
/petsc/src/ksp/ksp/tests/ex28.c
/petsc/src/ksp/ksp/tests/ex29.c
/petsc/src/ksp/ksp/tests/ex30.c
/petsc/src/ksp/ksp/tests/ex31.c
/petsc/src/ksp/ksp/tests/ex33.c
/petsc/src/ksp/ksp/tests/ex37.c
/petsc/src/ksp/ksp/tests/ex4.c
/petsc/src/ksp/ksp/tests/ex42.c
/petsc/src/ksp/ksp/tests/ex45.c
/petsc/src/ksp/ksp/tests/ex50.c
/petsc/src/ksp/ksp/tests/ex51.c
/petsc/src/ksp/ksp/tests/ex52f.F
/petsc/src/ksp/ksp/tests/ex54.c
/petsc/src/ksp/ksp/tests/ex55.c
/petsc/src/ksp/ksp/tests/ex57.c
/petsc/src/ksp/ksp/tests/ex63.cxx
/petsc/src/ksp/ksp/tests/ex8.c
/petsc/src/ksp/ksp/tutorials/ex14f.F90
/petsc/src/ksp/ksp/tutorials/ex2.c
/petsc/src/ksp/ksp/tutorials/ex35.cxx
/petsc/src/ksp/ksp/tutorials/ex36.cxx
/petsc/src/ksp/ksp/tutorials/ex43-solcx.h
/petsc/src/ksp/ksp/tutorials/ex45f.F90
/petsc/src/ksp/ksp/tutorials/ex49.c
/petsc/src/ksp/ksp/tutorials/ex52.c
/petsc/src/ksp/ksp/tutorials/ex52f.F90
/petsc/src/ksp/ksp/tutorials/ex54.c
/petsc/src/ksp/ksp/tutorials/ex54f.F90
/petsc/src/ksp/ksp/tutorials/ex5f.F90
/petsc/src/ksp/ksp/tutorials/ex60.c
/petsc/src/ksp/ksp/tutorials/ex61f.F90
/petsc/src/ksp/ksp/tutorials/ex64.c
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/petsc/systems/Apple/iOS/examples/testopengl/Classes/iphoneViewController.h
557cf19531-Jan-2019 Matthew G. Knepley <knepley@gmail.com>

DM+SNES: Preliminary adaptive interpolation
- Using the scheme from BootstrapAMG with some modifications to apply to GMG
- Moved adaptive interpolation into DM from Plex
- Added event for adaptation

DM+SNES: Preliminary adaptive interpolation
- Using the scheme from BootstrapAMG with some modifications to apply to GMG
- Moved adaptive interpolation into DM from Plex
- Added event for adaptation
- Added routine to check an interpolator
- Added viewer for coarse and fine vectors used for interpolation optimization
- Add coarse space determined by eigenvectors
- Right now adaptive interpolation is unweighted

show more ...


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ea78f98c23-Aug-2020 Lisandro Dalcin <dalcinl@gmail.com>

DM: Replace 0 -> NULL for pointers


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7721572320-Aug-2020 Lisandro Dalcin <dalcinl@gmail.com>

DMPlex: Add high-order geometry tests for the Gmsh reader


/petsc/share/petsc/datafiles/meshes/gmsh-B2qua.geo
/petsc/share/petsc/datafiles/meshes/gmsh-B2tri.geo
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tests/ex99.c
tests/output/ex99_B2.out
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tests/output/ex99_B3_bnd.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-1_dim-1_msh-B2qua.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-1_dim-1_msh-B2tri.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-1_dim-2_msh-B2qua.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-1_dim-2_msh-B2tri.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-1_dim-2_msh-B3hex.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-1_dim-2_msh-B3tet.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-1_dim-3_msh-B3hex.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-1_dim-3_msh-B3tet.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-2_dim-1_msh-B2qua.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-2_dim-1_msh-B2tri.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-2_dim-2_msh-B2qua.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-2_dim-2_msh-B2tri.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-2_dim-2_msh-B3hex.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-2_dim-2_msh-B3tet.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-2_dim-3_msh-B3hex.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-2_dim-3_msh-B3tet.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-3_dim-1_msh-B2qua.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-3_dim-1_msh-B2tri.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-3_dim-2_msh-B2qua.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-3_dim-2_msh-B2tri.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-3_dim-2_msh-B3hex.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-3_dim-2_msh-B3tet.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-3_dim-3_msh-B3hex.out
tests/output/ex99_B_lin_dm_plex_gmsh_project_petscspace_degree-3_dim-3_msh-B3tet.out
066ea43f19-Aug-2020 Lisandro Dalcin <dalcinl@gmail.com>

DMPlex: Support for high-order geometry in Gmsh reader


plexglvis.c
plexgmsh.c
tests/ex99.c
3dd0d30416-Aug-2020 Lisandro Dalcin <dalcinl@gmail.com>

DMPlex: Implement Gmsh -> lexicographic ordering


/petsc/.gitlab-ci.yml
/petsc/.readthedocs.yml
/petsc/config/BuildSystem/config/packages/make.py
/petsc/config/BuildSystem/config/packages/pragmatic.py
/petsc/config/BuildSystem/config/packages/tetgen.py
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/options/arch.py
/petsc/config/install.py
/petsc/include/petsc/finclude/petscmat.h
/petsc/include/petsc/private/sectionimpl.h
/petsc/include/petscdm.h
/petsc/lib/petsc/conf/rules
/petsc/lib/petsc/conf/variables
/petsc/makefile
/petsc/src/dm/dt/fe/interface/fe.c
gmshlex.h
/petsc/src/dm/interface/dm.c
/petsc/src/docs/sphinx_docs/.gitignore
/petsc/src/docs/sphinx_docs/Makefile
/petsc/src/docs/sphinx_docs/conf.py
/petsc/src/docs/sphinx_docs/developers/documentation.rst
/petsc/src/docs/sphinx_docs/ext/html5_petsc.py
/petsc/src/docs/sphinx_docs/guides/guide_to_examples.rst
/petsc/src/docs/sphinx_docs/guides/guide_to_examples_by_physics.rst
/petsc/src/docs/sphinx_docs/guides/physics/guide_to_stokes.rst
/petsc/src/docs/sphinx_docs/manual/acknowledgements.rst
/petsc/src/docs/sphinx_docs/manual/advanced.rst
/petsc/src/docs/sphinx_docs/manual/dmplex.rst
/petsc/src/docs/sphinx_docs/manual/ksp.rst
/petsc/src/docs/sphinx_docs/manual/other.rst
/petsc/src/docs/sphinx_docs/manual/snes.rst
/petsc/src/docs/sphinx_docs/manual/vec.rst
/petsc/src/docs/sphinx_docs/requirements.txt
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/documentation/installation.html
/petsc/src/docs/website/features/gpus.html
/petsc/src/snes/tutorials/ex62.c
/petsc/src/snes/tutorials/output/ex62_2d_p2_p1_bddc.out
/petsc/src/snes/tutorials/output/ex62_2d_p2_p1_block_diagonal.out
/petsc/src/snes/tutorials/output/ex62_2d_p2_p1_block_triangular.out
/petsc/src/snes/tutorials/output/ex62_2d_p2_p1_check.out
/petsc/src/snes/tutorials/output/ex62_2d_p2_p1_check_parallel.out
/petsc/src/snes/tutorials/output/ex62_2d_p2_p1_conv.out
/petsc/src/snes/tutorials/output/ex62_2d_p2_p1_conv_gamg.out
/petsc/src/snes/tutorials/output/ex62_2d_p2_p1_fetidp.out
/petsc/src/snes/tutorials/output/ex62_2d_p2_p1_gmg_vcycle.out
/petsc/src/snes/tutorials/output/ex62_2d_p2_p1_schur_diagonal.out
/petsc/src/snes/tutorials/output/ex62_2d_p2_p1_schur_full.out
/petsc/src/snes/tutorials/output/ex62_2d_p2_p1_schur_lower.out
/petsc/src/snes/tutorials/output/ex62_2d_p2_p1_schur_upper.out
/petsc/src/snes/tutorials/output/ex62_2d_p2_p1_simple.out
/petsc/src/snes/tutorials/output/ex62_2d_p3_p2_check.out
/petsc/src/snes/tutorials/output/ex62_2d_p3_p2_conv.out
/petsc/src/snes/tutorials/output/ex62_2d_q1_p0_conv.out
/petsc/src/snes/tutorials/output/ex62_2d_q1_p0_gmg_vanka.out
/petsc/src/snes/tutorials/output/ex62_2d_q1_p0_vanka.out
/petsc/src/snes/tutorials/output/ex62_2d_q1_p0_vanka_denseinv.out
/petsc/src/snes/tutorials/output/ex62_2d_q2_q1_check.out
/petsc/src/snes/tutorials/output/ex62_2d_q2_q1_conv.out
/petsc/src/snes/tutorials/output/ex62_2d_q2_q1_fetidp.out
/petsc/src/snes/tutorials/output/ex62_3d_p2_p1_check.out
/petsc/src/snes/tutorials/output/ex62_3d_p2_p1_check_parallel.out
/petsc/src/snes/tutorials/output/ex62_3d_p2_p1_conv.out
/petsc/src/snes/tutorials/output/ex62_3d_p2_p1_fetidp.out
/petsc/src/snes/tutorials/output/ex62_3d_p3_p2_check.out
/petsc/src/snes/tutorials/output/ex62_3d_p3_p2_conv.out
/petsc/src/snes/tutorials/output/ex62_3d_q1_p0_conv.out
/petsc/src/snes/tutorials/output/ex62_3d_q2_q1_check.out
/petsc/src/snes/tutorials/output/ex62_3d_q2_q1_conv.out
/petsc/src/snes/tutorials/output/ex62_3d_q2_q1_fetidp.out
/petsc/src/ts/tutorials/ex11.c
/petsc/src/ts/tutorials/output/ex11_sw_hll.out
9b44eab410-Aug-2020 Matthew G. Knepley <knepley@gmail.com>

Plex: Added Plex creation options
-dm_plex_box_dim
-dm_plex_box_simplex
-dm_distribute
-dm_distribute_overlap


/petsc/include/petscds.h
/petsc/src/dm/dt/interface/dtds.c
plexcreate.c
/petsc/src/dm/interface/dmi.c
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
8cda795410-Aug-2020 Matthew G. Knepley <knepley@gmail.com>

DM: Nullspace constructor should report old and new field numbers


/petsc/.gitlab-ci.yml
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/hwloc.py
/petsc/config/BuildSystem/config/packages/kokkos.py
/petsc/config/BuildSystem/config/packages/openmp.py
/petsc/config/examples/arch-ci-linux-cuda-double.py
/petsc/config/examples/arch-ci-linux-intel.py
/petsc/config/examples/arch-ci-linux-viennacl-cuda.py
/petsc/config/examples/arch-ci-linux-viennacl.py
/petsc/config/gmakegen.py
/petsc/config/gmakegentest.py
/petsc/config/petsc_harness.sh
/petsc/config/query_tests.py
/petsc/config/testparse.py
/petsc/gmakefile
/petsc/gmakefile.test
/petsc/include/petsc/private/dmimpl.h
/petsc/include/petscdm.h
/petsc/include/petsclog.h
/petsc/include/petscviennacl.h
/petsc/lib/petsc/conf/rules
/petsc/lib/petsc/conf/test
/petsc/makefile
/petsc/src/dm/impls/moab/dmmbfem.cxx
plex.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmi.c
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/ksp/impls/cg/pipecgrr/pipecgrr.c
/petsc/src/ksp/ksp/impls/cg/stcg/stcg.c
/petsc/src/ksp/pc/impls/deflation/deflation.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/tests/ex78.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/tutorials/ex17.c
/petsc/src/snes/tutorials/ex3.c
/petsc/src/snes/tutorials/ex3k.kokkos.cxx
/petsc/src/snes/tutorials/ex56.c
/petsc/src/snes/tutorials/makefile
/petsc/src/snes/tutorials/output/ex3_12.out
/petsc/src/snes/tutorials/output/ex3k_1.out
/petsc/src/snes/utils/convest.c
/petsc/src/sys/objects/pinit.c
/petsc/src/tao/bound/impls/bncg/bncg.c
/petsc/src/tao/constrained/impls/ipm/pdipm.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/tests/ex1.c
/petsc/src/ts/tests/ex2.c
/petsc/src/ts/tests/ex3.c
/petsc/src/ts/tests/ex4.c
/petsc/src/ts/tests/ex5.c
/petsc/src/ts/tests/ex6.c
/petsc/src/ts/tests/ex7.c
/petsc/src/ts/tests/output/ex6_1.out
/petsc/src/ts/tests/output/ex6_1_alt.out
/petsc/src/ts/tests/output/ex7_1.out
/petsc/src/ts/tests/output/ex7_1_alt.out
/petsc/src/ts/tutorials/advection-diffusion-reaction/ex1.c
/petsc/src/ts/tutorials/advection-diffusion-reaction/ex2.c
/petsc/src/ts/tutorials/advection-diffusion-reaction/ex4.c
/petsc/src/ts/tutorials/ex3.c
/petsc/src/ts/tutorials/ex43.c
/petsc/src/ts/tutorials/ex53.c
/petsc/src/ts/utils/tsconvest.c
/petsc/src/vec/vec/impls/mpi/mpiviennacl/mpiviennacl.cxx
/petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx
/petsc/src/vec/vec/impls/seq/seqviennacl/viennaclvecimpl.h
/petsc/src/vec/vec/tests/ex57.cxx
/petsc/src/vec/vec/tests/makefile
/petsc/src/vec/vec/tests/output/ex57_1.out
402df9f012-Aug-2020 Lisandro Dalcin <dalcinl@gmail.com>

DMPlex: Add exhaustive tests for the Gmsh reader


/petsc/config/BuildSystem/config/packages/gmsh.py
/petsc/share/petsc/datafiles/meshes/gmsh-hex.geo
/petsc/share/petsc/datafiles/meshes/gmsh-qua.geo
/petsc/share/petsc/datafiles/meshes/gmsh-seg.geo
/petsc/share/petsc/datafiles/meshes/gmsh-tet.geo
/petsc/share/petsc/datafiles/meshes/gmsh-tri.geo
/petsc/share/petsc/datafiles/meshes/gmsh-vtx.geo
/petsc/share/petsc/datafiles/meshes/gmsh-wed.geo
tests/ex99.c
tests/output/ex99_msh-hex.out
tests/output/ex99_msh-qua.out
tests/output/ex99_msh-seg.out
tests/output/ex99_msh-tet.out
tests/output/ex99_msh-tri.out
tests/output/ex99_msh-wed.out
0598e1a209-Aug-2020 Lisandro Dalcin <dalcinl@gmail.com>

DMPlex: Update Gmsh reader to support high-order meshes


/petsc/config/BuildSystem/config/compilerOptions.py
/petsc/config/BuildSystem/config/framework.py
/petsc/config/BuildSystem/config/packages/f2cblaslapack.py
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/options/sharedLibraries.py
/petsc/include/petsc/private/cudavecimpl.h
/petsc/include/petsc/private/sfimpl.h
plexgmsh.c
tests/output/ex1_gmsh_1.out
tests/output/ex1_gmsh_12.out
tests/output/ex1_gmsh_2.out
tests/output/ex1_gmsh_3.out
tests/output/ex1_gmsh_4.out
tests/output/ex1_gmsh_5.out
tests/output/ex1_gmsh_6.out
tests/output/ex1_p4est_gmsh_periodic.out
/petsc/src/dm/interface/dm.c
/petsc/src/docs/manualpages-sec/header_FV
/petsc/src/docs/manualpages-sec/header_SNES
/petsc/src/mat/impls/aij/mpi/mpicusparse/mpicusparsematimpl.h
/petsc/src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h
/petsc/src/mat/impls/dense/seq/cuda/densecuda.cu
/petsc/src/vec/vec/impls/mpi/mpicuda/mpicuda.cu
/petsc/src/vec/vec/impls/seq/seqcuda/makefile
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda.c
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu
/petsc/src/vec/vec/impls/seq/seqcuda/vecscattercuda.cu
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vscat/impls/seq/seqvscat.c
/petsc/src/vec/vscat/impls/sf/vscatsf.c
/petsc/src/vec/vscat/impls/vscat.c
/petsc/src/vec/vscat/interface/vscatfce.c
25b6865a06-Aug-2020 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

DMPlexBuildFromCellList{,Parallel}: Improve vertex count handling.

* DMPlexBuildFromCellListParallel: add global vertex count argument
* DMPlexBuildFromCellList{,Parallel}: local and global vertex c

DMPlexBuildFromCellList{,Parallel}: Improve vertex count handling.

* DMPlexBuildFromCellListParallel: add global vertex count argument
* DMPlexBuildFromCellList{,Parallel}: local and global vertex count can be PETSC_DECIDE
* if both are PETSC_DECIDE, max vertex id in cells + 1 is used
* DMPlexLoad_HDF5_Xdmf_Internal: the check is no more needed

show more ...


/petsc/.gitlab-alcf-ci.yaml
/petsc/config/examples/arch-alcfci-theta-cray-opt.py
/petsc/config/examples/arch-alcfci-theta-intel-opt.py
/petsc/include/petsc/private/taoimpl.h
/petsc/include/petscdmplex.h
/petsc/include/petscvec.h
/petsc/src/dm/impls/network/network.c
plexadapt.c
plexcreate.c
plexhdf5xdmf.c
plexmed.c
tests/ex18.c
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/mat/impls/aij/seq/aijmkl/aijmkl.c
/petsc/src/tao/bound/impls/bnk/bnk.c
/petsc/src/tao/complementarity/tutorials/output/minsurf1_1.out
/petsc/src/tao/complementarity/tutorials/output/minsurf1_2.out
/petsc/src/tao/complementarity/tutorials/output/minsurf1_2_alt.out
/petsc/src/tao/interface/taosolver.c
/petsc/src/tao/interface/taosolver_bounds.c
/petsc/src/tao/leastsquares/tutorials/cs1.c
/petsc/src/tao/leastsquares/tutorials/output/cs1_2.out
/petsc/src/tao/linesearch/interface/taolinesearch.c
/petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx
/petsc/src/vec/vec/tests/ex56.c
/petsc/src/vec/vec/tests/makefile
/petsc/src/vec/vec/tests/output/ex56_1.out
6831752408-Aug-2020 Matthew G. Knepley <knepley@gmail.com>

Plex: Fix coordinates for sphere with quads


/petsc/include/petscviewer.h
plexcreate.c
tests/ex1.c
tests/output/ex1_sphere_2.out
tests/output/ex1_sphere_3.out
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/snes/interface/snes.c
/petsc/src/sys/classes/viewer/interface/viewa.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/tutorials/ex53.c
/petsc/src/ts/utils/dmts.c
9994689005-Aug-2020 Barry Smith <bsmith@mcs.anl.gov>

DMPlexBuildCoordinatesFromCellList: use Vec{Get,Restore}ArrayWrite


plexcreate.c
5e48833105-Aug-2020 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

DMPlexBuildCoordinatesFromCellList: Remove invertCells arg.

* ditto for DMPlexBuildCoordinatesFromCellListParallel
* remove DMPlexInvertCell_Internal
* add DMPlexInvertCells_XDMF_Private into plexhd

DMPlexBuildCoordinatesFromCellList: Remove invertCells arg.

* ditto for DMPlexBuildCoordinatesFromCellListParallel
* remove DMPlexInvertCell_Internal
* add DMPlexInvertCells_XDMF_Private into plexhdf5xdmf.c
* called only in DMPlexLoad_HDF5_Xdmf_Internal
* process all cells at once
* support variable cone size

show more ...


/petsc/include/petscdmplex.h
/petsc/src/dm/impls/network/network.c
plexcreate.c
plexhdf5xdmf.c
1edcf0b204-Aug-2020 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

DMPlexBuildCoordinatesFromCellList: remove numCells,numVertices args


/petsc/include/petscdmplex.h
plexcreate.c
plexhdf5xdmf.c

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