History log of /petsc/src/dm/impls/plex/ (Results 1926 – 1950 of 5874)
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2c4dacf210-Dec-2019 Barry Smith <bsmith@mcs.anl.gov>

Generate useful error messages if PETSc was installed without mesh generator

Commit-type: error-checking, style-fix, documentation
Reported-by: Ivan Blagopoluchnyy <nuclearrazor@gmail.com>


/petsc/config/configure.py
/petsc/include/petsc/private/sfimpl.h
/petsc/include/petsc/private/vecscatterimpl.h
/petsc/include/petscmat.h
plexgenerate.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/installation.html
/petsc/src/ksp/ksp/examples/tests/ex43.c
/petsc/src/ksp/pc/impls/factor/factor.c
/petsc/src/ksp/pc/impls/mg/mgfunc.c
/petsc/src/ksp/pc/impls/telescope/telescope.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/color/interface/matcoloring.c
/petsc/src/mat/examples/tests/ex5.c
/petsc/src/mat/examples/tests/ex68.c
/petsc/src/mat/impls/aij/mpi/mpiov.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/order/sorder.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesj2.c
/petsc/src/vec/is/sf/impls/basic/allgather/sfallgather.c
/petsc/src/vec/is/sf/impls/basic/allgatherv/sfallgatherv.c
/petsc/src/vec/is/sf/impls/basic/allgatherv/sfallgatherv.h
/petsc/src/vec/is/sf/impls/basic/alltoall/sfalltoall.c
/petsc/src/vec/is/sf/impls/basic/cuda/sfpackcuda.cu
/petsc/src/vec/is/sf/impls/basic/gather/sfgather.c
/petsc/src/vec/is/sf/impls/basic/gatherv/sfgatherv.c
/petsc/src/vec/is/sf/impls/basic/gatherv/sfgatherv.h
/petsc/src/vec/is/sf/impls/basic/neighbor/sfneighbor.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.h
/petsc/src/vec/is/sf/impls/basic/sfpack.c
/petsc/src/vec/is/sf/impls/basic/sfpack.h
/petsc/src/vec/is/sf/interface/sf.c
/petsc/src/vec/vec/utils/vecmpitoseq.c
/petsc/src/vec/vscat/examples/ex8.c
/petsc/src/vec/vscat/examples/output/ex8_1.out
/petsc/src/vec/vscat/examples/output/ex8_2.out
/petsc/src/vec/vscat/impls/sf/vscatsf.c
/petsc/src/vec/vscat/interface/vscreate.c
83c5d78809-Dec-2019 Matthew G. Knepley <knepley@gmail.com>

Plex: The matrix implementation for dual graph construction had incorrect preallocation


/petsc/config/configure.py
/petsc/include/petsc/private/sfimpl.h
/petsc/include/petsc/private/vecscatterimpl.h
/petsc/include/petscmat.h
plexpartition.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/installation.html
/petsc/src/ksp/ksp/examples/tests/ex43.c
/petsc/src/ksp/pc/impls/factor/factor.c
/petsc/src/ksp/pc/impls/mg/mgfunc.c
/petsc/src/ksp/pc/impls/telescope/telescope.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/color/interface/matcoloring.c
/petsc/src/mat/examples/tests/ex5.c
/petsc/src/mat/examples/tests/ex68.c
/petsc/src/mat/impls/aij/mpi/mpiov.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/order/sorder.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesj2.c
/petsc/src/vec/is/sf/impls/basic/allgather/sfallgather.c
/petsc/src/vec/is/sf/impls/basic/allgatherv/sfallgatherv.c
/petsc/src/vec/is/sf/impls/basic/allgatherv/sfallgatherv.h
/petsc/src/vec/is/sf/impls/basic/alltoall/sfalltoall.c
/petsc/src/vec/is/sf/impls/basic/cuda/sfpackcuda.cu
/petsc/src/vec/is/sf/impls/basic/gather/sfgather.c
/petsc/src/vec/is/sf/impls/basic/gatherv/sfgatherv.c
/petsc/src/vec/is/sf/impls/basic/gatherv/sfgatherv.h
/petsc/src/vec/is/sf/impls/basic/neighbor/sfneighbor.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.h
/petsc/src/vec/is/sf/impls/basic/sfpack.c
/petsc/src/vec/is/sf/impls/basic/sfpack.h
/petsc/src/vec/is/sf/interface/sf.c
/petsc/src/vec/vec/utils/vecmpitoseq.c
/petsc/src/vec/vscat/examples/ex8.c
/petsc/src/vec/vscat/examples/output/ex8_1.out
/petsc/src/vec/vscat/examples/output/ex8_2.out
/petsc/src/vec/vscat/impls/sf/vscatsf.c
/petsc/src/vec/vscat/interface/vscreate.c
c567924805-Dec-2019 Stefano Zampini <stefano.zampini@gmail.com>

DMPLEX ex33: added tests for corner cases in the PetscPartitioner class


examples/tests/ex33.c
examples/tests/output/ex33_parmetis_nsize-1_nparts-1.out
examples/tests/output/ex33_parmetis_nsize-1_nparts-2.out
examples/tests/output/ex33_parmetis_nsize-1_nparts-3.out
examples/tests/output/ex33_parmetis_nsize-2_nparts-1.out
examples/tests/output/ex33_parmetis_nsize-2_nparts-2.out
examples/tests/output/ex33_parmetis_nsize-2_nparts-3.out
examples/tests/output/ex33_parmetis_nsize-3_nparts-1.out
examples/tests/output/ex33_parmetis_nsize-3_nparts-2.out
examples/tests/output/ex33_parmetis_nsize-3_nparts-3.out
examples/tests/output/ex33_ptscotch_nsize-1_nparts-1.out
examples/tests/output/ex33_ptscotch_nsize-1_nparts-2.out
examples/tests/output/ex33_ptscotch_nsize-1_nparts-3.out
examples/tests/output/ex33_ptscotch_nsize-2_nparts-1.out
examples/tests/output/ex33_ptscotch_nsize-2_nparts-2.out
examples/tests/output/ex33_ptscotch_nsize-2_nparts-3.out
examples/tests/output/ex33_ptscotch_nsize-3_nparts-1.out
examples/tests/output/ex33_ptscotch_nsize-3_nparts-2.out
examples/tests/output/ex33_ptscotch_nsize-3_nparts-3.out
examples/tests/output/ex33_simple_nsize-1_nparts-1.out
examples/tests/output/ex33_simple_nsize-1_nparts-2.out
examples/tests/output/ex33_simple_nsize-1_nparts-3.out
examples/tests/output/ex33_simple_nsize-2_nparts-1.out
examples/tests/output/ex33_simple_nsize-2_nparts-2.out
examples/tests/output/ex33_simple_nsize-2_nparts-3.out
examples/tests/output/ex33_simple_nsize-3_nparts-1.out
examples/tests/output/ex33_simple_nsize-3_nparts-2.out
examples/tests/output/ex33_simple_nsize-3_nparts-3.out
3c41b85324-Nov-2019 Stefano Zampini <stefano.zampini@gmail.com>

PetscPartitioner: Fix the class in many ways

- DMPlex now weights owned local cells by summing all the local section dofs in the closure of the cell
- Add support for target partition weights via ad

PetscPartitioner: Fix the class in many ways

- DMPlex now weights owned local cells by summing all the local section dofs in the closure of the cell
- Add support for target partition weights via additional PetscSection
- Add centralized option to use vertex weights
- Update man pages
- Rename PetscPartitionerPartition to PetscPartitionerDMPlexPartition since the function is specific to DMPlex
- Add interface to properly partition a graph via PetscPartitionerPartition
- Skip empty processes for distributed graphs in ParMetis and PTSCOTCH
- MatPartitioningPTSCOTCH: match PetscPartitioner calls
- DMPLEX ex24: added target partitioning tests

Update output files

show more ...


/petsc/include/petsc/private/dmpleximpl.h
/petsc/include/petscdmplex.h
examples/tests/ex1.c
examples/tests/ex24.c
examples/tests/ex31.c
examples/tests/output/ex12_lb_0.out
examples/tests/output/ex12_lb_1.out
examples/tests/output/ex18_7_hdf5_hierarch_nsize-2.out
examples/tests/output/ex18_7_hdf5_hierarch_nsize-3.out
examples/tests/output/ex18_7_hdf5_hierarch_nsize-4.out
examples/tests/output/ex1_part_parmetis_0.out
examples/tests/output/ex1_part_ptscotch_0.out
examples/tests/output/ex1_part_ptscotch_1.out
examples/tests/output/ex24_3.out
petscpartmatpart.c
plexdistribute.c
plexpartition.c
/petsc/src/dm/interface/dmregall.c
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/mat/examples/tutorials/output/ex15_2.out
/petsc/src/mat/partition/impls/scotch/scotch.c
3e03ebd804-Dec-2019 Stefano Zampini <stefano.zampini@gmail.com>

PetscSectionSetClosureIndex: take reference on objects set


plexindices.c
/petsc/src/sys/objects/options.c
/petsc/src/sys/utils/sorti.c
/petsc/src/vec/is/section/interface/section.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
/petsc/src/vec/is/sf/impls/basic/sfpack.c
/petsc/src/vec/is/sf/interface/sf.c
31e08e5303-Dec-2019 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

dm_impls_plex_tests-ex18: Minor fixes of ProcessOptions().

* Remove check redundant thanks to use of PetscOptionsRangeInt.
* Move PetscOptionsRangeInt(-dim,...) to a safer place.


/petsc/include/petsc/private/sfimpl.h
/petsc/include/petsc/private/vecscatterimpl.h
examples/tests/ex18.c
/petsc/src/ksp/ksp/examples/tests/ex43.c
/petsc/src/mat/examples/tests/ex5.c
/petsc/src/vec/is/sf/impls/basic/allgather/sfallgather.c
/petsc/src/vec/is/sf/impls/basic/allgatherv/sfallgatherv.c
/petsc/src/vec/is/sf/impls/basic/allgatherv/sfallgatherv.h
/petsc/src/vec/is/sf/impls/basic/alltoall/sfalltoall.c
/petsc/src/vec/is/sf/impls/basic/cuda/sfpackcuda.cu
/petsc/src/vec/is/sf/impls/basic/gather/sfgather.c
/petsc/src/vec/is/sf/impls/basic/gatherv/sfgatherv.c
/petsc/src/vec/is/sf/impls/basic/gatherv/sfgatherv.h
/petsc/src/vec/is/sf/impls/basic/neighbor/sfneighbor.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.h
/petsc/src/vec/is/sf/impls/basic/sfpack.c
/petsc/src/vec/is/sf/impls/basic/sfpack.h
/petsc/src/vec/is/sf/interface/sf.c
/petsc/src/vec/vec/utils/vecmpitoseq.c
/petsc/src/vec/vscat/examples/ex8.c
/petsc/src/vec/vscat/examples/output/ex8_1.out
/petsc/src/vec/vscat/examples/output/ex8_2.out
/petsc/src/vec/vscat/impls/sf/vscatsf.c
/petsc/src/vec/vscat/interface/vscreate.c
90a8aa4429-Nov-2019 Jed Brown <jed@jedbrown.org>

DMPlexCopyCoordinates: set coordinate dimension

As included example shows (by failing existing simplex tests), the
simplex sphere mesh was returning the incorrect coordinate dimension.

Commit-type:

DMPlexCopyCoordinates: set coordinate dimension

As included example shows (by failing existing simplex tests), the
simplex sphere mesh was returning the incorrect coordinate dimension.

Commit-type: bug-fix, example

show more ...


/petsc/config/report_tests.py
examples/tutorials/ex7.c
plexinterpolate.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
9886b8cf26-Nov-2019 Stefano Zampini <stefano.zampini@gmail.com>

DMPLEX: rename DMPlexCreateNumbering_Internal and make it PETSC_EXTERN

Application may use this function


/petsc/config/BuildSystem/config/packages/SuiteSparse.py
/petsc/config/report_tests.py
/petsc/include/petsc/private/dmpleximpl.h
/petsc/include/petsclog.h
/petsc/include/petscmat.h
/petsc/include/petscoptions.h
/petsc/makefile
plex.c
plexhdf5.c
plexpartition.c
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/ksp/ksp/examples/tests/ex49.c
/petsc/src/ksp/ksp/examples/tests/output/ex49_cholmod.out
/petsc/src/ksp/ksp/examples/tutorials/ex5.c
/petsc/src/ksp/ksp/examples/tutorials/output/ex59_bddc_fetidp_ml_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex59_bddc_fetidp_ml_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex59_bddc_fetidp_ml_3.out
/petsc/src/ksp/ksp/interface/eige.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcschurs.c
/petsc/src/mat/examples/tests/ex127.c
/petsc/src/mat/examples/tests/ex241f.F90
/petsc/src/mat/impls/adj/mpi/mpiadj.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c
/petsc/src/mat/impls/aij/seq/aijfact.c
/petsc/src/mat/impls/aij/seq/cholmod/aijcholmod.c
/petsc/src/mat/impls/aij/seq/umfpack/umfpack.c
/petsc/src/mat/impls/elemental/matelem.cxx
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/aijsbaij.c
/petsc/src/mat/impls/sbaij/seq/cholmod/cholmodimpl.h
/petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c
/petsc/src/mat/impls/sbaij/seq/relax.h
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.h
/petsc/src/mat/impls/sbaij/seq/sbaij2.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/partition/partition.c
/petsc/src/snes/examples/tutorials/ex62.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex19_suitesparse.out
/petsc/src/snes/examples/tutorials/output/ex62_fetidp_3d_hex.out
/petsc/src/snes/examples/tutorials/output/ex62_fetidp_3d_tet.out
/petsc/src/snes/examples/tutorials/output/ex62_fetidp_3d_tet_alt.out
/petsc/src/snes/examples/tutorials/output/ex62_fetidp_3d_tet_spetsc.out
/petsc/src/sys/objects/options.c
/petsc/src/vec/is/section/interface/section.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
8f38c17f06-Nov-2019 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

ex18 update


examples/tests/ex18.c
e902f1ea06-Nov-2019 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

DMSetFromOptions_Plex: add -dm_plex_check_all option


plexcreate.c
/petsc/src/dm/interface/dm.c
95eb5ee506-Nov-2019 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

doc: Make DMSetFromOptions() manpage a hub for all Check functions.

All DMPlex* point to DMSetFromOptions for complete list.


plex.c
plexcheckinterface.c
/petsc/src/dm/interface/dm.c
75ebff7a06-Nov-2019 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

DMSetFromOptions_Plex: process -dm_plex_check_pointsf and -dm_plex_check_interface_cones


plexcreate.c
45da879f06-Nov-2019 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

DMPlexCheckSkeleton: Pass for uninterpolated meshes.

Get rid of -dm_plex_force_check_faces.

https://gitlab.com/petsc/petsc/merge_requests/2176#note_240927016


examples/tests/ex1.c
plex.c
a8432d5b06-Nov-2019 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

DMPlexCheckConesConformOnInterfaces -> DMPlexCheckInterfaceCones.

Manpage improved.


/petsc/config/BuildSystem/config/packages/SuiteSparse.py
/petsc/config/report_tests.py
/petsc/include/petscdmplex.h
/petsc/include/petsclog.h
/petsc/include/petscmat.h
/petsc/makefile
examples/tests/output/ex18_2a.out
plexcheckinterface.c
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/ksp/ksp/examples/tests/ex49.c
/petsc/src/ksp/ksp/examples/tests/output/ex49_cholmod.out
/petsc/src/ksp/ksp/examples/tutorials/ex5.c
/petsc/src/ksp/ksp/examples/tutorials/output/ex59_bddc_fetidp_ml_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex59_bddc_fetidp_ml_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex59_bddc_fetidp_ml_3.out
/petsc/src/ksp/ksp/interface/eige.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcschurs.c
/petsc/src/mat/examples/tests/ex127.c
/petsc/src/mat/examples/tests/ex241f.F90
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c
/petsc/src/mat/impls/aij/seq/aijfact.c
/petsc/src/mat/impls/aij/seq/cholmod/aijcholmod.c
/petsc/src/mat/impls/aij/seq/umfpack/umfpack.c
/petsc/src/mat/impls/elemental/matelem.cxx
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/aijsbaij.c
/petsc/src/mat/impls/sbaij/seq/cholmod/cholmodimpl.h
/petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c
/petsc/src/mat/impls/sbaij/seq/relax.h
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.h
/petsc/src/mat/impls/sbaij/seq/sbaij2.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tutorials/ex62.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex19_suitesparse.out
/petsc/src/snes/examples/tutorials/output/ex62_fetidp_3d_hex.out
/petsc/src/snes/examples/tutorials/output/ex62_fetidp_3d_tet.out
/petsc/src/snes/examples/tutorials/output/ex62_fetidp_3d_tet_alt.out
/petsc/src/snes/examples/tutorials/output/ex62_fetidp_3d_tet_spetsc.out
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
3055757625-Nov-2019 Satish Balay <balay@mcs.anl.gov>

Merge remote-tracking branch 'origin/maint'


/petsc/config/BuildSystem/config/packages/SuperLU_DIST.py
/petsc/include/petsc/private/matimpl.h
plexfluent.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/ksp/pc/impls/asm/asm.c
/petsc/src/ksp/pc/impls/bjacobi/bjacobi.c
/petsc/src/ksp/pc/impls/deflation/deflation.c
/petsc/src/ksp/pc/impls/gasm/gasm.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/snes/examples/tutorials/network/water/waterreaddata.c
4fc4961425-Nov-2019 Barry Smith <bsmith@mcs.anl.gov>

Merge branch 'haplav/knepley/fix-plex-parallel-interpolation' into 'master'

fix parallel interpolation

Closes #336

See merge request petsc/petsc!2318


examples/tests/ex18.c
examples/tests/ex4.c
plexinterpolate.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c
/petsc/src/ts/interface/ts.c
cfe011ea25-Nov-2019 Satish Balay <balay@mcs.anl.gov>

Merge branch 'balay/valgrind-fixes' into 'maint'

fix various valgrind warnings

See merge request petsc/petsc!2293


/petsc/config/BuildSystem/config/packages/SuperLU_DIST.py
/petsc/config/PETSc/options/arch.py
/petsc/config/examples/arch-ci-freebsd-c-single-opt.py
/petsc/config/examples/arch-ci-freebsd-cxx-cmplx-64idx-dbg.py
/petsc/config/examples/arch-ci-freebsd-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-ci-freebsd-cxx-pkgs-opt.py
/petsc/config/examples/arch-ci-freebsd-pkgs-opt.py
/petsc/config/examples/arch-ci-linux-ILP64.py
/petsc/config/examples/arch-ci-linux-analyzer.py
/petsc/config/examples/arch-ci-linux-c-exodus-dbg.py
/petsc/config/examples/arch-ci-linux-clang-avx.py
/petsc/config/examples/arch-ci-linux-cmplx-gcov.py
/petsc/config/examples/arch-ci-linux-cmplx-single.py
/petsc/config/examples/arch-ci-linux-cuda-double.py
/petsc/config/examples/arch-ci-linux-cuda-single.py
/petsc/config/examples/arch-ci-linux-cxx-cmplx-pkgs-64idx.py
/petsc/config/examples/arch-ci-linux-gcc-complex-opt.py
/petsc/config/examples/arch-ci-linux-gcc-cxx-avx2.py
/petsc/config/examples/arch-ci-linux-gcc-ifc-cmplx.py
/petsc/config/examples/arch-ci-linux-gcc-pkgs-opt.py
/petsc/config/examples/arch-ci-linux-gcc-quad-64idx-dbg.py
/petsc/config/examples/arch-ci-linux-gcov.py
/petsc/config/examples/arch-ci-linux-knl.py
/petsc/config/examples/arch-ci-linux-matlab-ilp64-gcov.py
/petsc/config/examples/arch-ci-linux-nagfor.py
/petsc/config/examples/arch-ci-linux-opt-cxx-quad.py
/petsc/config/examples/arch-ci-linux-opt-misc.py
/petsc/config/examples/arch-ci-linux-pardiso.py
/petsc/config/examples/arch-ci-linux-pgi.py
/petsc/config/examples/arch-ci-linux-pkgs-64idx.py
/petsc/config/examples/arch-ci-linux-pkgs-cxx-mlib.py
/petsc/config/examples/arch-ci-linux-pkgs-dbg-ftn-interfaces.py
/petsc/config/examples/arch-ci-linux-pkgs-gcov.py
/petsc/config/examples/arch-ci-linux-pkgs-opt.py
/petsc/config/examples/arch-ci-linux-pkgs-valgrind.py
/petsc/config/examples/arch-ci-linux-without-fc.py
/petsc/config/examples/arch-ci-linux-xsdk-dbg.py
/petsc/config/examples/arch-ci-mswin-intel-cxx-cmplx.py
/petsc/config/examples/arch-ci-mswin-intel.py
/petsc/config/examples/arch-ci-mswin-opt-impi.py
/petsc/config/examples/arch-ci-mswin-uni.py
/petsc/config/examples/arch-ci-opensolaris-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-ci-opensolaris-misc.py
/petsc/config/examples/arch-ci-opensolaris-pkgs-opt.py
/petsc/config/examples/arch-ci-osx-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-ci-osx-cxx-pkgs-opt.py
/petsc/config/examples/arch-ci-osx-dbg.py
/petsc/config/examples/arch-ci-osx-xsdk-opt.py
/petsc/include/petsc/private/matimpl.h
plexfluent.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/ksp/pc/impls/asm/asm.c
/petsc/src/ksp/pc/impls/bjacobi/bjacobi.c
/petsc/src/ksp/pc/impls/deflation/deflation.c
/petsc/src/ksp/pc/impls/gasm/gasm.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/snes/examples/tutorials/network/water/waterreaddata.c
e60f640e25-Nov-2019 Satish Balay <balay@mcs.anl.gov>

Merge branch 'maint'


/petsc/.gitlab-ci.yml
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/BlasLapack.py
/petsc/config/PETSc/options/arch.py
/petsc/config/examples/arch-ci-freebsd-c-single-opt.py
/petsc/config/examples/arch-ci-freebsd-cxx-cmplx-64idx-dbg.py
/petsc/config/examples/arch-ci-freebsd-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-ci-freebsd-cxx-pkgs-opt.py
/petsc/config/examples/arch-ci-freebsd-pkgs-opt.py
/petsc/config/examples/arch-ci-linux-ILP64.py
/petsc/config/examples/arch-ci-linux-analyzer.py
/petsc/config/examples/arch-ci-linux-c-exodus-dbg.py
/petsc/config/examples/arch-ci-linux-clang-avx.py
/petsc/config/examples/arch-ci-linux-cmplx-gcov.py
/petsc/config/examples/arch-ci-linux-cmplx-single.py
/petsc/config/examples/arch-ci-linux-cuda-double.py
/petsc/config/examples/arch-ci-linux-cuda-single.py
/petsc/config/examples/arch-ci-linux-cxx-cmplx-pkgs-64idx.py
/petsc/config/examples/arch-ci-linux-gcc-complex-opt.py
/petsc/config/examples/arch-ci-linux-gcc-cxx-avx2.py
/petsc/config/examples/arch-ci-linux-gcc-ifc-cmplx.py
/petsc/config/examples/arch-ci-linux-gcc-pkgs-opt.py
/petsc/config/examples/arch-ci-linux-gcc-quad-64idx-dbg.py
/petsc/config/examples/arch-ci-linux-gcov.py
/petsc/config/examples/arch-ci-linux-knl.py
/petsc/config/examples/arch-ci-linux-matlab-ilp64-gcov.py
/petsc/config/examples/arch-ci-linux-nagfor.py
/petsc/config/examples/arch-ci-linux-opt-cxx-quad.py
/petsc/config/examples/arch-ci-linux-opt-misc.py
/petsc/config/examples/arch-ci-linux-pardiso.py
/petsc/config/examples/arch-ci-linux-pgi.py
/petsc/config/examples/arch-ci-linux-pkgs-64idx.py
/petsc/config/examples/arch-ci-linux-pkgs-cxx-mlib.py
/petsc/config/examples/arch-ci-linux-pkgs-dbg-ftn-interfaces.py
/petsc/config/examples/arch-ci-linux-pkgs-gcov.py
/petsc/config/examples/arch-ci-linux-pkgs-opt.py
/petsc/config/examples/arch-ci-linux-pkgs-valgrind.py
/petsc/config/examples/arch-ci-linux-without-fc.py
/petsc/config/examples/arch-ci-linux-xsdk-dbg.py
/petsc/config/examples/arch-ci-mswin-intel-cxx-cmplx.py
/petsc/config/examples/arch-ci-mswin-intel.py
/petsc/config/examples/arch-ci-mswin-opt-impi.py
/petsc/config/examples/arch-ci-mswin-uni.py
/petsc/config/examples/arch-ci-opensolaris-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-ci-opensolaris-misc.py
/petsc/config/examples/arch-ci-opensolaris-pkgs-opt.py
/petsc/config/examples/arch-ci-osx-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-ci-osx-cxx-pkgs-opt.py
/petsc/config/examples/arch-ci-osx-dbg.py
/petsc/config/examples/arch-ci-osx-xsdk-opt.py
/petsc/include/petscdmnetwork.h
/petsc/include/petscversion.h
/petsc/lib/petsc/bin/maint/gcov.py
/petsc/makefile
/petsc/src/dm/impls/network/network.c
examples/tests/ex26.c
/petsc/src/dm/impls/stag/examples/tests/ex11.c
/petsc/src/dm/impls/stag/examples/tests/ex8.c
/petsc/src/docs/website/download/index.html
/petsc/src/ksp/pc/impls/composite/composite.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/mat/interface/matrix.c
/petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c
a7261c6b24-Nov-2019 prj- <pierre.jolivet@enseeiht.fr>

Some typos


/petsc/.gitlab-ci.yml
/petsc/.gitlab/CODEOWNERS
/petsc/config/BuildSystem/config/compilers.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/BlasLapack.py
/petsc/config/BuildSystem/config/packages/ctetgen.py
/petsc/config/BuildSystem/config/packages/openblas.py
/petsc/config/BuildSystem/config/packages/pflotran.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/PETSc/options/arch.py
/petsc/config/PETSc/options/installDir.py
/petsc/config/configure.py
/petsc/config/examples/arch-ci-linux-cuda-single.py
/petsc/config/gmakegentest.py
/petsc/config/petsc_harness.sh
/petsc/config/query_tests.py
/petsc/config/report_tests.py
/petsc/gmakefile.test
/petsc/include/petsccublas.h
/petsc/include/petscerror.h
/petsc/include/petscversion.h
/petsc/lib/petsc/bin/maint/gcov.py
/petsc/makefile
examples/tests/ex26.c
/petsc/src/dm/impls/stag/examples/tests/ex11.c
/petsc/src/dm/impls/stag/examples/tests/ex8.c
/petsc/src/docs/tex/manual/developers.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/documentation/changes/312.html
/petsc/src/docs/website/download/index.html
/petsc/src/ksp/pc/impls/composite/composite.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/hypre/hypre.c
/petsc/src/mat/impls/dense/seq/cuda/densecuda.cu
/petsc/src/mat/interface/matrix.c
/petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c
/petsc/src/sys/objects/cuda/handle.c
/petsc/src/sys/objects/cuda/makefile
/petsc/src/sys/objects/init.c
/petsc/src/sys/objects/makefile
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
/petsc/src/vec/vec/impls/seq/seqcuda/cudavecimpl.h
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda.c
3634242611-Nov-2019 Satish Balay <balay@mcs.anl.gov>

fix various valgrind warnings

Fixes #439, #450, #458


/petsc/.gitlab/CODEOWNERS
/petsc/config/BuildSystem/config/compilers.py
/petsc/config/BuildSystem/config/packages/SuperLU_DIST.py
/petsc/config/BuildSystem/config/packages/ctetgen.py
/petsc/config/BuildSystem/config/packages/openblas.py
/petsc/config/BuildSystem/config/packages/pflotran.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/PETSc/options/arch.py
/petsc/config/PETSc/options/installDir.py
/petsc/config/configure.py
/petsc/config/examples/arch-ci-linux-cuda-single.py
/petsc/config/gmakegentest.py
/petsc/config/petsc_harness.sh
/petsc/config/query_tests.py
/petsc/config/report_tests.py
/petsc/gmakefile.test
/petsc/include/petsccublas.h
/petsc/include/petscerror.h
/petsc/include/petscversion.h
plexfluent.c
/petsc/src/docs/tex/manual/developers.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/documentation/changes/312.html
/petsc/src/docs/website/download/index.html
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/hypre/hypre.c
/petsc/src/mat/impls/dense/seq/cuda/densecuda.cu
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tutorials/network/water/waterreaddata.c
/petsc/src/sys/objects/cuda/handle.c
/petsc/src/sys/objects/cuda/makefile
/petsc/src/sys/objects/init.c
/petsc/src/sys/objects/makefile
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
/petsc/src/vec/vec/impls/seq/seqcuda/cudavecimpl.h
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda.c
f29b851e21-Nov-2019 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

dm_impls_plex_tests-ex4_hybint_3d_s2t_% still fail, update TODO


examples/tests/ex4.c
5c11981b20-Nov-2019 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

ex18: PointSF fixed, so update TODOs


examples/tests/ex18.c
plexinterpolate.c
3be36e8320-Nov-2019 Matthew G. Knepley <knepley@gmail.com>

Plex: New rendevouz scheme for parallel interpolation


plexinterpolate.c
0513c43822-Nov-2019 Satish Balay <balay@mcs.anl.gov>

Merge branch 'haplav/feature-check-boundary-connected' into 'master'

ultimate PointSF test

See merge request petsc/petsc!1989


examples/tests/ex18.c
examples/tests/output/7_par_hdf5_parmetis.out
examples/tests/output/7_par_hdf5_parmetis_int.out
examples/tests/output/ex18_5_dist0_interpolate-none.out
examples/tests/output/ex18_5_dist0_interpolate-serial.out
examples/tests/output/ex18_5_dist1_interpolate-none.out
examples/tests/output/ex18_5_dist1_interpolate-parallel.out
examples/tests/output/ex18_5_dist1_interpolate-serial.out
examples/tests/output/ex18_5_seq_interpolate-none.out
examples/tests/output/ex18_5_seq_interpolate-serial.out
examples/tests/output/ex18_6_hex.out
examples/tests/output/ex18_6_int_hex.out
examples/tests/output/ex18_6_int_quad.out
examples/tests/output/ex18_6_int_tet.out
examples/tests/output/ex18_6_int_tri.out
examples/tests/output/ex18_6_parint_hex.out
examples/tests/output/ex18_6_parint_quad.out
examples/tests/output/ex18_6_parint_tet.out
examples/tests/output/ex18_6_parint_tri.out
examples/tests/output/ex18_6_quad.out
examples/tests/output/ex18_6_tet.out
examples/tests/output/ex18_6_tri.out
examples/tests/output/ex18_7_exo.out
examples/tests/output/ex18_7_exo_int_metis.out
examples/tests/output/ex18_7_exo_int_simple.out
examples/tests/output/ex18_7_exo_metis_int.out
examples/tests/output/ex18_7_exo_simple_int.out
examples/tests/output/ex18_7_hdf5_hierarch_nsize-2.out
examples/tests/output/ex18_7_hdf5_hierarch_nsize-3.out
examples/tests/output/ex18_7_hdf5_hierarch_nsize-4.out
examples/tests/output/ex18_7_par_hdf5.out
examples/tests/output/ex18_7_par_hdf5_int.out
examples/tests/output/ex18_7_par_hdf5_int_parmetis.out
examples/tests/output/ex18_7_par_hdf5_parmetis.out
examples/tests/output/ex18_7_par_hdf5_parmetis_int.out
examples/tests/output/ex18_7_seq_hdf5_int_metis.out
examples/tests/output/ex18_7_seq_hdf5_int_simple.out
examples/tests/output/ex18_7_seq_hdf5_metis_int.out
examples/tests/output/ex18_7_seq_hdf5_simple.out
examples/tests/output/ex18_7_seq_hdf5_simple_int.out
examples/tests/output/ex18_8.out
examples/tests/output/ex18_9_par_hdf5.out
examples/tests/output/ex18_9_par_hdf5_int.out
examples/tests/output/ex18_9_par_hdf5_int_parmetis.out
examples/tests/output/ex18_9_par_hdf5_parmetis.out
examples/tests/output/ex18_9_par_hdf5_parmetis_int.out
examples/tests/output/ex18_9_seq_hdf5_int_metis.out
examples/tests/output/ex18_9_seq_hdf5_int_simple.out
examples/tests/output/ex18_9_seq_hdf5_metis_int.out
examples/tests/output/ex18_9_seq_hdf5_simple.out
examples/tests/output/ex18_9_seq_hdf5_simple_int.out
examples/tests/output/ex18_9_seq_hdf5_simple_int_err.out
plexgeometry.c
/petsc/src/vec/vec/examples/tutorials/makefile
/petsc/src/vec/vec/examples/tutorials/output/performance_cuda.out
/petsc/src/vec/vec/examples/tutorials/performance.c
9ade321922-Nov-2019 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

Improve manpages of DMPlexIsInterpolated and friends.

DMPlexIsInterpolatedCollective, DMPlexInterpolatedFlag.


/petsc/.gitlab/CODEOWNERS
/petsc/config/BuildSystem/config/compilers.py
/petsc/config/BuildSystem/config/packages/PTScotch.py
/petsc/config/BuildSystem/config/packages/ctetgen.py
/petsc/config/BuildSystem/config/packages/openblas.py
/petsc/config/BuildSystem/config/packages/pflotran.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/PETSc/options/arch.py
/petsc/config/PETSc/options/installDir.py
/petsc/config/configure.py
/petsc/config/examples/arch-ci-linux-cuda-single.py
/petsc/config/gmakegentest.py
/petsc/config/petsc_harness.sh
/petsc/config/query_tests.py
/petsc/config/report_tests.py
/petsc/gmakefile.test
/petsc/include/petsccublas.h
/petsc/include/petscdmplex.h
/petsc/include/petscerror.h
plexinterpolate.c
/petsc/src/docs/tex/manual/developers.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/changes/312.html
/petsc/src/ksp/ksp/examples/tutorials/ex71.c
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_3lev_hpddm.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_3lev_hpddm_baij.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_deluxe_layers_adapt_mkl_pardiso_pc_bddc_schur_layers-10_pc_bddc_adaptive_userdefined-1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_deluxe_layers_adapt_mkl_pardiso_pc_bddc_schur_layers-1_pc_bddc_adaptive_userdefined-1.out
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/hypre/hypre.c
/petsc/src/mat/impls/dense/seq/cuda/densecuda.cu
/petsc/src/mat/interface/matrix.c
/petsc/src/sys/error/err.c
/petsc/src/sys/objects/cuda/handle.c
/petsc/src/sys/objects/cuda/makefile
/petsc/src/sys/objects/init.c
/petsc/src/sys/objects/makefile
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
/petsc/src/vec/vec/impls/seq/seqcuda/cudavecimpl.h
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda.c

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