History log of /petsc/src/dm/impls/plex/ (Results 2101 – 2125 of 5874)
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903fd86331-Jul-2019 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

ex18: add more tests to testset 7%

caef204831-Jul-2019 Karl Rupp <me@karlrupp.net>

Merge branch 'knepley/feature-plex-hybrid-input' [PR #1922]

* knepley/feature-plex-hybrid-input:
Plex+GMsh: Allow hybrid meshes where wedges match cells at wedge sides
Plex+ExodusII: Order hybrid ce

Merge branch 'knepley/feature-plex-hybrid-input' [PR #1922]

* knepley/feature-plex-hybrid-input:
Plex+GMsh: Allow hybrid meshes where wedges match cells at wedge sides
Plex+ExodusII: Order hybrid cells last, and set hybrid bounds in DM
Plex ex1: Added more wedge tests

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c259827c30-Jul-2019 Karl Rupp <me@karlrupp.net>

Merge branch 'haplav/plex-ex18-enable-parallel-partitioning-uninterpolated-meshes' [PR #1918]

* haplav/plex-ex18-enable-parallel-partitioning-uninterpolated-meshes:
ex18: add back in -interpolate {{

Merge branch 'haplav/plex-ex18-enable-parallel-partitioning-uninterpolated-meshes' [PR #1918]

* haplav/plex-ex18-enable-parallel-partitioning-uninterpolated-meshes:
ex18: add back in -interpolate {{none parallel}}
It seems @Matthew Knepley has already fixed the reason why these tests were TODO.

show more ...

9a6228f230-Jul-2019 Karl Rupp <me@karlrupp.net>

Merge branch 'haplav/fix-dmplexgetconerecursive' [PR #1917]

* haplav/fix-dmplexgetconerecursive:
Follow up Pull Request #1906 - realized this issue when further building upon that.

7138940630-Jul-2019 Matthew G. Knepley <knepley@gmail.com>

Plex ex1: Fix test requirement

beaa264830-Jul-2019 Matthew G. Knepley <knepley@gmail.com>

Plex ex1: Added more wedge tests

e8f6893f30-Jul-2019 Matthew G. Knepley <knepley@gmail.com>

Plex+ExodusII: Order hybrid cells last, and set hybrid bounds in DM

a5b208b630-Jul-2019 Matthew G. Knepley <knepley@gmail.com>

Plex+GMsh: Allow hybrid meshes where wedges match cells at wedge sides

1cf1d7cb30-Jul-2019 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

ex18: CreateMesh_1D: Fix space dimension 2 -> 1.

Use user->dim instead of special variable - different topological and spatial dimension don't make sense here.

72753dde16-Jun-2019 Barry Smith <bsmith@mcs.anl.gov>

ex18.c was passing __float128 cast to double for 1d case and size 1 and never filled coordinates with values for 1d cases

Commit-type: bug-fix
Reported-by: Jenkins

248eb25930-Jul-2019 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

Remove redundant custom fortran stub for DMPlexInterpolate().

Discussion in [petsc-dev] https://lists.mcs.anl.gov/pipermail/petsc-dev/2019-July/024792.html


/petsc/config/BuildSystem/config/framework.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/MPICH.py
/petsc/config/BuildSystem/config/packages/OpenMPI.py
/petsc/config/BuildSystem/config/packages/cmake.py
/petsc/config/BuildSystem/config/packages/cuda.py
/petsc/config/BuildSystem/config/packages/make.py
/petsc/config/BuildSystem/config/packages/sowing.py
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/options/arch.py
/petsc/include/petsc/finclude/petscmat.h
/petsc/include/petsc/private/matimpl.h
/petsc/include/petscmat.h
/petsc/include/petscsys.h
/petsc/src/dm/dt/fe/impls/opencl/feopencl.c
ftn-custom/makefile
plexinterpolate.c
/petsc/src/docs/website/documentation/installation.html
/petsc/src/mat/examples/tests/ex1.c
/petsc/src/mat/examples/tests/ex24.c
/petsc/src/mat/examples/tests/ex32.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex1_2.out
/petsc/src/mat/impls/aij/mpi/fdmpiaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/fdaij.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/aij/seq/seqviennacl/aijviennacl.cxx
/petsc/src/mat/impls/dense/seq/cuda/densecuda.cu
/petsc/src/mat/impls/dense/seq/cuda/makefile
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/dense/seq/dense.h
/petsc/src/mat/impls/dense/seq/makefile
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/matregis.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/utils/axpy.c
/petsc/src/snes/examples/tutorials/ex77.c
/petsc/src/snes/utils/dmdasnes.c
/petsc/src/tao/examples/tutorials/ex4.c
/petsc/src/vec/vec/impls/seq/seqcuda/cudavecimpl.h
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu
/petsc/src/vec/vscat/examples/ex9.c
/petsc/src/vec/vscat/examples/output/ex9_1.out
/petsc/src/vec/vscat/examples/output/ex9_2.out
/petsc/src/vec/vscat/examples/output/ex9_3.out
daa3e67729-Jul-2019 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

ex18: add back in -interpolate {{none parallel}}

694e9bc429-Jul-2019 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

add dm_impls_plex_tests-ex18_2c which tests that

ac03b90129-Jul-2019 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

DMPlexGetConeRecursive: Don't jump out for n=0.

This makes no sense and leads to undefined outputs.
All works fine for n=0, just 0-sized objects are returned.

57d7ab5029-Jul-2019 Karl Rupp <me@karlrupp.net>

Merge branch 'haplav/feature-generalize-dmplexgetconerecursive' [PR #1906]

* haplav/feature-generalize-dmplexgetconerecursive:
generalize DMPlexGetConeRecursive


/petsc/config/BuildSystem/config/compilers.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/BlasLapack.py
/petsc/config/BuildSystem/config/packages/MPI.py
/petsc/config/BuildSystem/config/packages/exodusii.py
/petsc/config/BuildSystem/config/packages/f2cblaslapack.py
/petsc/config/BuildSystem/config/packages/fblaslapack.py
/petsc/include/petsc/finclude/petscpc.h
/petsc/include/petsc/private/kernels/blockinvert.h
/petsc/include/petscdmplex.h
/petsc/include/petscmat.h
/petsc/include/petscpctypes.h
examples/tests/ex18.c
examples/tests/output/ex18_2a.out
examples/tests/output/ex18_2b.out
plex.c
plexcheckinterface.c
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/documentation/installation.html
/petsc/src/ksp/ksp/examples/tutorials/ex74.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex74_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex74_1_alt.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex74_1_alt_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex74_1_alt_3.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex74_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex74_2_alt.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex74_2_alt_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex74_2_alt_3.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex74_3.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex74_3_alt.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex74_3_alt_2.out
/petsc/src/ksp/pc/impls/pbjacobi/pbjacobi.c
/petsc/src/mat/examples/tests/ex177.c
/petsc/src/mat/examples/tests/ex231.cxx
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex176.out
/petsc/src/mat/examples/tests/output/ex231_1.out
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h
/petsc/src/mat/impls/baij/seq/baij.h
/petsc/src/mat/impls/baij/seq/dgedi.c
/petsc/src/mat/impls/kaij/kaij.c
/petsc/src/mat/impls/kaij/kaij.h
/petsc/src/mat/impls/kaij/makefile
/petsc/src/mat/impls/makefile
/petsc/src/mat/interface/matregis.c
/petsc/src/sys/examples/tests/ex52.c
/petsc/src/sys/examples/tests/makefile
/petsc/src/sys/examples/tests/output/ex52_1.out
/petsc/src/sys/utils/sorti.c
32423fc426-Jul-2019 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

DMPlexCheckConesConformOnInterfaces: fix several missing CHKERRQ

0539308025-Jul-2019 Karl Rupp <me@karlrupp.net>

Merge branch 'jczhang/sf-more-opts' [PR #1567]

* jczhang/sf-more-opts:
Add more optimizations in SF and use it as the default for VecScatter.


/petsc/config/BuildSystem/config/packages/MPI.py
/petsc/config/BuildSystem/config/packages/MUMPS.py
/petsc/config/BuildSystem/config/packages/PTScotch.py
/petsc/config/BuildSystem/config/packages/scalapack.py
/petsc/config/examples/arch-pardiso.py
/petsc/gmakefile
/petsc/gmakefile.test
/petsc/include/petsc/private/dmstagimpl.h
/petsc/include/petsc/private/sfimpl.h
/petsc/include/petscdmstag.h
/petsc/include/petsclog.h
/petsc/include/petscsf.h
/petsc/include/petscvec.h
plexcheckinterface.c
plexcreate.c
plexinterpolate.c
plexmed.c
plexnatural.c
plexpartition.c
plexpreallocate.c
/petsc/src/dm/impls/stag/examples/tests/ex1.c
/petsc/src/dm/impls/stag/examples/tests/ex10.c
/petsc/src/dm/impls/stag/examples/tests/ex13.c
/petsc/src/dm/impls/stag/examples/tests/makefile
/petsc/src/dm/impls/stag/examples/tests/output/ex10_7.out
/petsc/src/dm/impls/stag/examples/tests/output/ex13_ghosted_1d_par_stag_stencil_width-0.out
/petsc/src/dm/impls/stag/examples/tests/output/ex13_ghosted_1d_par_stag_stencil_width-1.out
/petsc/src/dm/impls/stag/examples/tests/output/ex13_ghosted_1d_par_stag_stencil_width-2.out
/petsc/src/dm/impls/stag/examples/tests/output/ex13_ghosted_1d_seq_stag_stencil_width-0.out
/petsc/src/dm/impls/stag/examples/tests/output/ex13_ghosted_1d_seq_stag_stencil_width-1.out
/petsc/src/dm/impls/stag/examples/tests/output/ex13_ghosted_1d_seq_stag_stencil_width-2.out
/petsc/src/dm/impls/stag/examples/tests/output/ex13_ghosted_periodic_periodic_3d_par_stag_stencil_width-0.out
/petsc/src/dm/impls/stag/examples/tests/output/ex13_ghosted_periodic_periodic_3d_par_stag_stencil_width-1.out
/petsc/src/dm/impls/stag/examples/tests/output/ex13_ghosted_periodic_periodic_3d_par_stag_stencil_width-2.out
/petsc/src/dm/impls/stag/examples/tests/output/ex13_none_1d_par_stag_stencil_width-0.out
/petsc/src/dm/impls/stag/examples/tests/output/ex13_none_1d_par_stag_stencil_width-1.out
/petsc/src/dm/impls/stag/examples/tests/output/ex13_none_1d_par_stag_stencil_width-2.out
/petsc/src/dm/impls/stag/examples/tests/output/ex13_none_1d_seq_stag_stencil_width-0.out
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/petsc/src/dm/impls/stag/examples/tests/output/ex13_none_ghosted_2d_par_stag_stencil_width-0.out
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/petsc/src/dm/impls/stag/examples/tests/output/ex13_none_ghosted_2d_seq_stag_stencil_width-1.out
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/petsc/src/dm/impls/stag/examples/tests/output/ex13_none_none_2d_par_stag_stencil_width-0.out
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/petsc/src/dm/impls/stag/examples/tests/output/ex13_none_none_2d_par_stag_stencil_width-2.out
/petsc/src/dm/impls/stag/examples/tests/output/ex13_none_none_2d_seq_stag_stencil_width-0.out
/petsc/src/dm/impls/stag/examples/tests/output/ex13_none_none_2d_seq_stag_stencil_width-1.out
/petsc/src/dm/impls/stag/examples/tests/output/ex13_none_none_2d_seq_stag_stencil_width-2.out
/petsc/src/dm/impls/stag/examples/tests/output/ex13_none_none_none_3d_par_stag_stencil_width-0.out
/petsc/src/dm/impls/stag/examples/tests/output/ex13_none_none_none_3d_par_stag_stencil_width-1.out
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/petsc/src/dm/impls/stag/examples/tests/output/ex13_none_periodic_2d_par_stag_stencil_width-0.out
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/petsc/src/dm/impls/stag/examples/tutorials/ex1.c
/petsc/src/dm/impls/stag/examples/tutorials/makefile
/petsc/src/dm/impls/stag/examples/tutorials/output/ex1_periodic_seq.out
/petsc/src/dm/impls/stag/stag.c
/petsc/src/dm/impls/stag/stag1d.c
/petsc/src/dm/impls/stag/stag2d.c
/petsc/src/dm/impls/stag/stag3d.c
/petsc/src/dm/impls/stag/stagda.c
/petsc/src/dm/impls/stag/stagutils.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/pc/impls/patch/pcpatch.c
/petsc/src/mat/examples/tests/ex134.c
/petsc/src/mat/examples/tests/ex135.c
/petsc/src/mat/examples/tests/ex191.c
/petsc/src/mat/examples/tests/output/ex115_7_alt.out
/petsc/src/mat/examples/tests/output/ex134_1.out
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/petsc/src/mat/examples/tests/output/ex191_1.out
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/snes/impls/nasm/aspin.c
/petsc/src/snes/impls/nasm/nasm.c
/petsc/src/sys/logging/xmllogevent.c
/petsc/src/sys/utils/mpishm.c
/petsc/src/vec/is/sf/examples/tests/ex3.c
/petsc/src/vec/is/sf/examples/tests/makefile
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/petsc/src/vec/is/sf/examples/tutorials/ex1.c
/petsc/src/vec/is/sf/examples/tutorials/output/ex1_6_basic_alt.out
/petsc/src/vec/is/sf/impls/basic/allgather/makefile
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/petsc/src/vec/is/sf/impls/basic/neighbor/sfneighbor.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.h
/petsc/src/vec/is/sf/impls/basic/sfpack.c
/petsc/src/vec/is/sf/impls/basic/sfpack.h
/petsc/src/vec/is/sf/impls/window/sfwindow.c
/petsc/src/vec/is/sf/interface/sf.c
/petsc/src/vec/is/sf/interface/sfregi.c
/petsc/src/vec/vec/utils/vecmpitoseq.c
/petsc/src/vec/vscat/examples/ex8.c
/petsc/src/vec/vscat/examples/ex9.c
/petsc/src/vec/vscat/examples/makefile
/petsc/src/vec/vscat/examples/output/ex8_1.out
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ee449d1e24-Jul-2019 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

ex18: fix leak in TestExpandPoints

fad0205803-Jul-2019 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

Test dm_impls_plex_tests-ex18_2b added.

Tests DMPlexGetConeRecursive.

6df680f702-Jul-2019 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

Test dm_impls_plex_tests-ex18_2a test added.

Tests -dm_plex_check_cones_conform_on_interfaces_verbose, hence DMPlexCheckConesConformOnInterfaces(), hence DMPlexGetConeRecursiveVertices()

af9eab4503-Jul-2019 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

DMPlexGetConeRecursive: Return ISs and sections for all depths.

- Get rid of recursive function calls.
- Add DMPlexGetConeRecursiveVertices which returns just the IS of depth 0.
- Add DMPlexRestoreC

DMPlexGetConeRecursive: Return ISs and sections for all depths.

- Get rid of recursive function calls.
- Add DMPlexGetConeRecursiveVertices which returns just the IS of depth 0.
- Add DMPlexRestoreConeRecursive which deallocates stuff allocated by DMPlexGetConeRecursive.

show more ...

052112bf02-Jul-2019 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

Test dm_impls_plex_tests-ex18_2b removed.

It's the same as dm_impls_plex_tests-ex18_2

8f2c89e702-Jul-2019 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

DMPlexCheckConesConformOnInterfaces: option for verbose print

40d3332d23-Jul-2019 Karl Rupp <me@karlrupp.net>

Merge branch 'knepley/fix-med-inversion' [PR #1900]

* knepley/fix-med-inversion:
Plex: MED tetrahedra are not inverted

ff5bdb3923-Jul-2019 Karl Rupp <me@karlrupp.net>

Merge branch 'jed/fix-med-types/maint' [PR #1891]

Post-merge update of error message.

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