History log of /petsc/src/dm/impls/plex/ (Results 251 – 275 of 5874)
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161b16ed29-Oct-2024 Satish Balay <balay@mcs.anl.gov>

Merge branch 'jrwrigh/cgns_timers' into 'main'

CGNS: Add LogEvents for read/write function calls

See merge request petsc/petsc!7967

37bca1d529-Oct-2024 Satish Balay <balay@mcs.anl.gov>

Merge branch 'kjansen/cgns_simple_test' into 'main'

cgns: add a simple parallel test

See merge request petsc/petsc!7962

ff01802629-Oct-2024 Kenneth E. Jansen <kenneth.jansen@colorado.edu>

cgns: add a simple parallel test

4c155f2828-Oct-2024 James Wright <james@jameswright.xyz>

cgns: Add LogEventObjects to macros

5582b11426-Oct-2024 James Wright <james@jameswright.xyz>

cgns: Add log events for CGNS calls

Co-authored-by: Jed Brown <jed@jedbrown.org>

ef9588a528-Oct-2024 Satish Balay <balay@mcs.anl.gov>

Merge branch 'release'

4e98a4a824-Oct-2024 Satish Balay <balay@mcs.anl.gov>

Merge branch 'stefanozampini-release-patch-15393' into 'release'

DMPLEX: remove flush of VTK viewer

See merge request petsc/petsc!7956

2e45e1b124-Oct-2024 Satish Balay <balay@mcs.anl.gov>

Merge remote-tracking branch 'origin/release'

9fc315c424-Oct-2024 Satish Balay <balay@mcs.anl.gov>

Merge branch 'jrwrigh/fix_isoperiodic_cgns' into 'main'

Plex: Fix DMSetCoordinateDisc projection for isoperiodic boundaries

See merge request petsc/petsc!7773

b9da1bb314-Oct-2021 Matthew G. Knepley <knepley@gmail.com>

Plex: Now use -dm_plex_orient to orient a newly created mesh

90df335618-Aug-2024 James Wright <james@jameswright.xyz>

Plex: Fix DMSetCoordinateDisc() for isoperiodic boundaries

This reinstates the changes added in !5970 and removed in !6959.

tl;dr, `DMCreateInterpolation` (used in `DMSetCoordinateDisc`, and
`DMPro

Plex: Fix DMSetCoordinateDisc() for isoperiodic boundaries

This reinstates the changes added in !5970 and removed in !6959.

tl;dr, `DMCreateInterpolation` (used in `DMSetCoordinateDisc`, and
`DMProjectCoordinates` before it) does not handle isoperiodic boundaries
correctly. !5970 replaced that code using `DMProjectFieldLocal` instead.
That was then removed in !6959. This is also discussed in issue 1506.
I initially made an MR in !7308, but that was on a fork. This commit is
on the PETSc repo itself.

show more ...

e58947e722-Oct-2024 Satish Balay <balay@mcs.anl.gov>

Merge branch 'jrwrigh/cleanup_malloc' into 'release'

sys: Cleanup PetscMalloc and PetscCalloc

See merge request petsc/petsc!7892

3260320602-Oct-2024 James Wright <james@jameswright.xyz>

Address potential Malloc/Calloc ternary operator bugs

- Bug either by the argument of the ternary operator being cast
inappropriately to `size_t` or by the values themselves not being cast
to `s

Address potential Malloc/Calloc ternary operator bugs

- Bug either by the argument of the ternary operator being cast
inappropriately to `size_t` or by the values themselves not being cast
to `size_t` when necessary.

show more ...

72b6020c21-Oct-2024 Satish Balay <balay@mcs.anl.gov>

Merge branch 'jrwrigh/cgns_fix_test' into 'main'

test: Fix parallel CGNS test redistribution

See merge request petsc/petsc!7955

f819935b20-Oct-2024 James Wright <james@jameswright.xyz>

test: Fix parallel CGNS test redistribution

Lack of flag meant that the mesh wasn't actually redistributed by
accident

4a23637c21-Oct-2024 James Wright <james@jameswright.xyz>

fix(plex): Remove leaking section creation

e535cce420-Oct-2024 James Wright <james@jameswright.xyz>

plex: Deprecate DMPlex{Set,Get}GlobalToNaturalSF

Natural SF got moved to a "global" DM object, so should be used there.
Additionally, DMPlexSetGlobalToNaturalSF() did not destroy a
pre-existing sfNa

plex: Deprecate DMPlex{Set,Get}GlobalToNaturalSF

Natural SF got moved to a "global" DM object, so should be used there.
Additionally, DMPlexSetGlobalToNaturalSF() did not destroy a
pre-existing sfNatural from the DM, causing memory leaks

show more ...

300f171205-Oct-2024 Stefano Zampini <stefano.zampini@gmail.com>

brain dead fixes for useless casts in examples

835f229505-Oct-2024 Stefano Zampini <stefano.zampini@gmail.com>

Brain dead fixes for useless casts


/petsc/include/petsc/private/logimpl.h
/petsc/include/petsc/private/petscimpl.h
/petsc/include/petsc/private/sfimpl.h
/petsc/include/petscmath.h
/petsc/include/petscoptions.h
/petsc/include/petscsys.h
/petsc/src/dm/dt/dualspace/impls/sum/dualspacesum.c
/petsc/src/dm/dt/fe/impls/basic/febasic.c
/petsc/src/dm/dt/fv/interface/fv.c
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/dt/space/impls/tensor/spacetensor.c
/petsc/src/dm/field/impls/da/dmfieldda.c
/petsc/src/dm/field/impls/ds/dmfieldds.c
/petsc/src/dm/field/impls/shell/dmfieldshell.c
/petsc/src/dm/impls/composite/packm.c
/petsc/src/dm/impls/da/da1.c
/petsc/src/dm/impls/da/da2.c
/petsc/src/dm/impls/da/da3.c
/petsc/src/dm/impls/da/dadd.c
/petsc/src/dm/impls/da/dainterp.c
/petsc/src/dm/impls/da/dalocal.c
/petsc/src/dm/impls/da/gr2.c
/petsc/src/dm/impls/network/network.c
/petsc/src/dm/impls/network/networkcreate.c
/petsc/src/dm/impls/network/networkview.c
/petsc/src/dm/impls/patch/patch.c
plex.c
plexadapt.c
plexcreate.c
plexdistribute.c
plexfem.c
plexfluent.c
plexgeometry.c
plexinterpolate.c
plexmetric.c
plexorient.c
plexpartition.c
plexrefine.c
plexsfc.c
plexsubmesh.c
plextree.c
transform/impls/extrude/plextrcohesive.c
transform/interface/plextransform.c
/petsc/src/dm/impls/stag/stag.c
/petsc/src/dm/impls/stag/stag3d.c
/petsc/src/dm/impls/swarm/data_bucket.c
/petsc/src/dm/impls/swarm/data_ex.c
/petsc/src/dm/impls/swarm/swarm.c
/petsc/src/dm/impls/swarm/swarm_migrate.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmgeommodel.c
/petsc/src/dm/label/dmlabel.c
/petsc/src/ksp/ksp/guess/impls/fischer/fischer.c
/petsc/src/ksp/ksp/guess/impls/pod/pod.c
/petsc/src/ksp/ksp/impls/cg/pipelcg/pipelcg.c
/petsc/src/ksp/ksp/impls/fcg/pipefcg/pipefcg.c
/petsc/src/ksp/ksp/impls/gcr/pipegcr/pipegcr.c
/petsc/src/ksp/ksp/impls/gmres/agmres/agmres.c
/petsc/src/ksp/ksp/impls/gmres/agmres/agmresdeflation.c
/petsc/src/ksp/ksp/impls/gmres/agmres/agmresorthog.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/impls/gmres/gmreig.c
/petsc/src/ksp/ksp/impls/gmres/pipefgmres/pipefgmres.c
/petsc/src/ksp/ksp/impls/minres/minres.c
/petsc/src/ksp/ksp/interface/eige.c
/petsc/src/ksp/ksp/interface/iterativ.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/utils/lmvm/dense/cd_utils.c
/petsc/src/ksp/pc/impls/asm/asm.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddcfetidp.c
/petsc/src/ksp/pc/impls/bddc/bddcgraph.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcschurs.c
/petsc/src/ksp/pc/impls/composite/composite.c
/petsc/src/ksp/pc/impls/deflation/deflation.c
/petsc/src/ksp/pc/impls/factor/factimpl.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/gamg/util.c
/petsc/src/ksp/pc/impls/is/nn/nn.c
/petsc/src/ksp/pc/impls/mat/pcmat.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/mpi/pcmpi.c
/petsc/src/ksp/pc/impls/patch/pcpatch.c
/petsc/src/ksp/pc/impls/redistribute/redistribute.c
/petsc/src/ksp/pc/impls/telescope/telescope.c
/petsc/src/ksp/pc/impls/telescope/telescope_dmda.c
/petsc/src/mat/graphops/coarsen/impls/hem/hem.c
/petsc/src/mat/graphops/coarsen/impls/mis/mis.c
/petsc/src/mat/graphops/coarsen/impls/misk/misk.c
/petsc/src/mat/graphops/coarsen/interface/coarsen.c
/petsc/src/mat/graphops/order/degree.c
/petsc/src/mat/graphops/order/fn1wd.c
/petsc/src/mat/graphops/order/fndsep.c
/petsc/src/mat/graphops/order/spectral.c
/petsc/src/mat/graphops/partition/partition.c
/petsc/src/mat/impls/aij/mpi/mpb_aij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/aijsell/aijsell.c
/petsc/src/mat/impls/aij/seq/bas/basfactor.c
/petsc/src/mat/impls/aij/seq/bas/spbas_cholesky.h
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/baij/mpi/mpb_baij.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/diagonal/diagonal.c
/petsc/src/mat/impls/is/matis.c
/petsc/src/mat/impls/maij/maij.c
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact2.c
/petsc/src/mat/impls/scatter/mscatter.c
/petsc/src/mat/impls/sell/seq/sell.c
/petsc/src/mat/impls/sell/seq/sell.h
/petsc/src/mat/impls/sell/seq/seqcuda/sellcuda.cu
/petsc/src/mat/impls/sell/seq/seqhip/sellhip.hip.cpp
/petsc/src/mat/impls/shell/shellcnv.c
/petsc/src/mat/interface/matproduct.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/utils/gcreate.c
/petsc/src/mat/utils/multequal.c
/petsc/src/snes/impls/composite/snescomposite.c
/petsc/src/snes/impls/fas/fasfunc.c
/petsc/src/snes/impls/nasm/nasm.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesut.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/snes/utils/dm/dmadapt.c
/petsc/src/snes/utils/dm/dminterpolatesnes.c
/petsc/src/snes/utils/dmlocalsnes.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/sys/classes/bag/bag.c
/petsc/src/sys/classes/draw/impls/image/drawimage.c
/petsc/src/sys/classes/draw/impls/x/ximpl.h
/petsc/src/sys/classes/draw/impls/x/xops.c
/petsc/src/sys/classes/draw/interface/dsave.c
/petsc/src/sys/classes/draw/utils/bars.c
/petsc/src/sys/classes/draw/utils/hists.c
/petsc/src/sys/classes/draw/utils/image.c
/petsc/src/sys/classes/draw/utils/lg.c
/petsc/src/sys/classes/draw/utils/lgc.c
/petsc/src/sys/classes/random/impls/rand48/rand48.c
/petsc/src/sys/classes/viewer/impls/ascii/filev.c
/petsc/src/sys/classes/viewer/impls/glvis/glvis.c
/petsc/src/sys/classes/viewer/impls/socket/send.c
/petsc/src/sys/classes/viewer/interface/viewreg.c
/petsc/src/sys/dll/reg.c
/petsc/src/sys/error/adebug.c
/petsc/src/sys/error/err.c
/petsc/src/sys/fileio/sysio.c
/petsc/src/sys/info/verboseinfo.c
/petsc/src/sys/logging/handler/impls/default/logdefault.c
/petsc/src/sys/logging/handler/impls/nested/xmlviewer.c
/petsc/src/sys/logging/handler/impls/perfstubs/logperfstubs.c
/petsc/src/sys/logging/plog.c
/petsc/src/sys/logging/state/logregistry.c
/petsc/src/sys/logging/state/logstate.c
/petsc/src/sys/memory/mal.c
/petsc/src/sys/memory/mem.c
/petsc/src/sys/memory/mtr.c
/petsc/src/sys/objects/aoptions.c
/petsc/src/sys/objects/destroy.c
/petsc/src/sys/objects/inherit.c
/petsc/src/sys/objects/options.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/perfstubs/pstimer.c
/petsc/src/sys/python/pythonsys.c
/petsc/src/sys/utils/server.c
/petsc/src/sys/utils/str.c
/petsc/src/tao/constrained/impls/ipm/ipm.c
/petsc/src/tao/interface/taosolver.c
/petsc/src/tao/leastsquares/impls/pounders/pounders.c
/petsc/src/tao/linesearch/interface/taolinesearch.c
/petsc/src/tao/util/tao_util.c
/petsc/src/ts/characteristic/impls/da/slda.c
/petsc/src/ts/characteristic/interface/characteristic.c
/petsc/src/ts/impls/arkimex/arkimex.c
/petsc/src/ts/interface/sensitivity/tssen.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tshistory.c
/petsc/src/ts/interface/tsmon.c
/petsc/src/ts/utils/dmdats.c
/petsc/src/ts/utils/dmnetworkts.c
/petsc/src/ts/utils/dmplexlandau/plexland.c
/petsc/src/vec/is/ao/impls/mapping/aomapping.c
/petsc/src/vec/is/ao/impls/memscalable/aomemscalable.c
/petsc/src/vec/is/is/utils/iscoloring.c
/petsc/src/vec/is/section/interface/section.c
/petsc/src/vec/is/sf/impls/basic/allgatherv/sfallgatherv.c
/petsc/src/vec/is/sf/impls/basic/alltoall/sfalltoall.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
/petsc/src/vec/is/sf/interface/sf.c
/petsc/src/vec/is/sf/interface/vscat.c
/petsc/src/vec/is/sf/utils/sfcoord.c
/petsc/src/vec/is/sf/utils/sfutils.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/pf/impls/string/cstring.c
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/impls/mpi/pvecimpl.h
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/comb.c
/petsc/src/vec/vec/utils/tagger/impls/cdf.c
/petsc/src/vec/vec/utils/vinv.c
5a236de621-Oct-2024 Satish Balay <balay@mcs.anl.gov>

Merge remote-tracking branch 'origin/release'

ad781fe321-Oct-2024 Satish Balay <balay@mcs.anl.gov>

Merge branch 'barry/2024-09-29/fix-function-typedef-style' into 'main'

Unify handling of context destructors

See merge request petsc/petsc!7900


/petsc/.clang-format
/petsc/config/BuildSystem/config/packages/slepc.py
/petsc/doc/changes/dev.rst
/petsc/doc/manual/getting_started.rst
/petsc/doc/manual/ksp.rst
/petsc/doc/manual/snes.rst
/petsc/include/petsc/private/cpp/register_finalize.hpp
/petsc/include/petsc/private/dmadaptorimpl.h
/petsc/include/petsc/private/dmimpl.h
/petsc/include/petsc/private/kspimpl.h
/petsc/include/petsc/private/linesearchimpl.h
/petsc/include/petsc/private/pcbddcprivateimpl.h
/petsc/include/petsc/private/pcimpl.h
/petsc/include/petsc/private/snesimpl.h
/petsc/include/petsc/private/taoimpl.h
/petsc/include/petsc/private/tsimpl.h
/petsc/include/petscdm.h
/petsc/include/petscdmadaptor.h
/petsc/include/petscksp.h
/petsc/include/petscoptions.h
/petsc/include/petscsnes.h
/petsc/include/petscsys.h
/petsc/include/petsctao.h
/petsc/include/petsctao_deprecations.h
/petsc/include/petscts.h
/petsc/src/dm/dt/fe/tests/ex1.c
/petsc/src/dm/dt/fe/tests/ex2.c
/petsc/src/dm/impls/moab/dmmbvec.cxx
plexcreate.c
plexegads.c
plexegadslite.c
plexfem.c
plexhdf5.c
/petsc/src/dm/interface/dm.c
/petsc/src/ksp/ksp/impls/fcg/fcg.c
/petsc/src/ksp/ksp/impls/fetidp/fetidp.c
/petsc/src/ksp/ksp/impls/gmres/gmres.c
/petsc/src/ksp/ksp/interface/ftn-custom/zitfuncf.c
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/ksp/interface/iterativ.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/pc/impls/bddc/bddcgraph.c
/petsc/src/ksp/pc/impls/bddc/bddcnullspace.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/mg/gdsw.c
/petsc/src/ksp/pc/impls/mpi/pcmpi.c
/petsc/src/ksp/pc/interface/pcset.c
/petsc/src/mat/impls/aij/mpi/kokkos/mpiaijkok.kokkos.cxx
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu
/petsc/src/mat/impls/aij/mpi/mpihipsparse/mpiaijhipsparse.hip.cpp
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/kokkos/aijkok.kokkos.cxx
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/aij/seq/seqhipsparse/aijhipsparse.hip.cpp
/petsc/src/mat/impls/htool/htool.cxx
/petsc/src/mat/impls/is/matis.c
/petsc/src/mat/impls/shell/shell.c
/petsc/src/mat/impls/shell/shellcnv.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/impls/composite/snescomposite.c
/petsc/src/snes/impls/fas/fasfunc.c
/petsc/src/snes/impls/nasm/nasm.c
/petsc/src/snes/impls/vi/rs/virs.c
/petsc/src/snes/interface/ftn-custom/zsnesf.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/snes/tutorials/ex30.c
/petsc/src/snes/tutorials/ex58.c
/petsc/src/snes/utils/dm/dmadapt.c
/petsc/src/snes/utils/dmdasnes.c
/petsc/src/snes/utils/dmsnes.c
/petsc/src/sys/classes/viewer/impls/glvis/glvis.c
/petsc/src/sys/classes/viewer/interface/viewers.c
/petsc/src/sys/objects/inherit.c
/petsc/src/sys/objects/options.c
/petsc/src/sys/objects/optionsyaml.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/utils/server.c
/petsc/src/tao/interface/taosolver.c
/petsc/src/ts/impls/pseudo/posindep.c
/petsc/src/ts/interface/ftn-custom/ztsf.c
/petsc/src/ts/interface/sensitivity/tssen.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tsmon.c
/petsc/src/ts/tutorials/ex12.c
/petsc/src/ts/tutorials/ex18.c
/petsc/src/ts/tutorials/ex52.c
/petsc/src/ts/tutorials/ex7.c
/petsc/src/ts/tutorials/extchemfield.c
/petsc/src/ts/utils/dmplexlandau/plexland.c
/petsc/src/ts/utils/dmts.c
/petsc/src/vec/vec/utils/vecglvis.c
a370cb8a21-Oct-2024 Satish Balay <balay@mcs.anl.gov>

Merge branch 'knepley/feature-hamiltonian-ex2-opt' into 'main'

Fix Hamiltonian ex2 for Landau Damping

See merge request petsc/petsc!7937

e5ab922b21-Oct-2024 Stefano Zampini <stefano.zampini@gmail.com>

DMPLEX: remove flush of VTK viewer

a2aa6d8120-Oct-2024 James Wright <james@jameswright.xyz>

plex: Misc style change

d52c2f2102-Oct-2024 Matthew G. Knepley <knepley@gmail.com>

DMSwarm: Allow multiple fields to define the DM field and multiple cellDM, allow different coordinate fields, and compute moments
- Changed interface for DMSwarmVectorDefineField() and DMSwarmVectorG

DMSwarm: Allow multiple fields to define the DM field and multiple cellDM, allow different coordinate fields, and compute moments
- Changed interface for DMSwarmVectorDefineField() and DMSwarmVectorGetField() to allow multiple fields
- Add DMSwarmReplace_Internal()
- Add coordinate name to Swarm
- Add DMSwarmGetCoordinateField() and DMSwarmSetCoordinateField()
- Add DMSwarmComputeMoments()
- In DMLocatePoints_Plex(), ignore extra coordinates in input vector
- Add CellDMInfo struct
- Add DMSwarmPushCellDM() and DMSwarmPopCellDM()

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