History log of /petsc/src/dm/impls/plex/ (Results 2726 – 2750 of 5874)
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fef8a7d208-Jun-2018 Matthew G. Knepley <knepley@gmail.com>

Plex: Propagate partition balance from initial to redistributed mesh

ebc8e70608-Jun-2018 Matthew G. Knepley <knepley@gmail.com>

Plex: Added an option for partition balance


/petsc/config/BuildSystem/config/libraries.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/PTScotch.py
/petsc/include/petsc/private/dmpleximpl.h
/petsc/include/petsc/private/matimpl.h
/petsc/include/petscmat.h
plexcreate.c
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/ksp/examples/tutorials/ex10.c
/petsc/src/ksp/ksp/examples/tutorials/ex29.c
/petsc/src/ksp/ksp/examples/tutorials/ex34.c
/petsc/src/ksp/ksp/examples/tutorials/ex71.c
/petsc/src/ksp/ksp/examples/tutorials/ex72.c
/petsc/src/ksp/ksp/examples/tutorials/output/ex72_bddc_par.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex72_bddc_par_nd_parmetis.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex72_bddc_par_nd_ptscotch.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex72_bddc_seq.out
/petsc/src/ksp/ksp/impls/fetidp/fetidp.c
/petsc/src/ksp/pc/impls/bddc/bddcfetidp.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcschurs.c
/petsc/src/mat/examples/tests/ex111.c
/petsc/src/mat/examples/tests/ex115.c
/petsc/src/mat/examples/tests/ex23.c
/petsc/src/mat/examples/tests/ex40.c
/petsc/src/mat/examples/tests/ex55.c
/petsc/src/mat/examples/tests/ex73.c
/petsc/src/mat/examples/tests/output/ex111_1.out
/petsc/src/mat/examples/tests/output/ex111_2.out
/petsc/src/mat/examples/tests/output/ex23_1.out
/petsc/src/mat/examples/tests/output/ex23_10.out
/petsc/src/mat/examples/tests/output/ex23_11.out
/petsc/src/mat/examples/tests/output/ex23_2.out
/petsc/src/mat/examples/tests/output/ex23_3.out
/petsc/src/mat/examples/tests/output/ex23_4.out
/petsc/src/mat/examples/tests/output/ex23_5.out
/petsc/src/mat/examples/tests/output/ex23_6.out
/petsc/src/mat/examples/tests/output/ex23_7.out
/petsc/src/mat/examples/tests/output/ex23_8.out
/petsc/src/mat/examples/tests/output/ex23_9.out
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/is/matis.c
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/partition/impls/pmetis/pmetis.c
/petsc/src/mat/partition/impls/scotch/scotch.c
/petsc/src/mat/partition/partition.c
/petsc/src/vec/is/is/utils/iscoloring.c
9bae9e5109-Jul-2018 Satish Balay <balay@mcs.anl.gov>

Merge remote-tracking branch 'origin/knepley/fix-plex-project-tests'

a2f22ac009-Jul-2018 Satish Balay <balay@mcs.anl.gov>

Merge remote-tracking branch 'origin/knepley/fix-dmfield-surface'


/petsc/config/BuildSystem/config/compilers.py
/petsc/config/BuildSystem/config/packages/cmake.py
/petsc/config/BuildSystem/config/packages/petsc4py.py
/petsc/include/petsc/finclude/petscdm.h
/petsc/include/petsc/private/dmdaimpl.h
/petsc/include/petsc/private/dmimpl.h
/petsc/include/petsc/private/isimpl.h
/petsc/include/petscdm.h
/petsc/include/petscis.h
/petsc/include/petscmat.h
/petsc/include/petscmath.h
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/examples/tests/ex46.c
/petsc/src/dm/examples/tests/makefile
/petsc/src/dm/examples/tests/output/ex46_1.out
/petsc/src/dm/examples/tests/output/ex46_2.out
/petsc/src/dm/field/impls/da/dmfieldda.c
/petsc/src/dm/field/impls/ds/dmfieldds.c
/petsc/src/dm/impls/da/da.c
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/da/dagetelem.c
/petsc/src/dm/impls/da/fdda.c
plexgeometry.c
plexproject.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/ksp/examples/tutorials/ex54.c
/petsc/src/ksp/ksp/examples/tutorials/ex56.c
/petsc/src/ksp/ksp/examples/tutorials/output/ex54_seqaijmkl.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex56_seqaijmkl.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex59_bddc_fetidp_approximate.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex59_bddc_fetidp_ml_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex59_bddc_fetidp_ml_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex59_bddc_fetidp_ml_3.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_both_approx.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_deluxe_layers.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_dir_approx.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_neu_approx.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_fetidp_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_fetidp_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_fetidp_elast.out
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddc.h
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.h
/petsc/src/ksp/pc/impls/bddc/bddcschurs.c
/petsc/src/ksp/pc/impls/bddc/bddcstructs.h
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/is/matis.c
/petsc/src/mat/impls/maij/maij.c
/petsc/src/mat/interface/matreg.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/utils/gcreate.c
/petsc/src/snes/examples/tutorials/output/ex12_p4est_full_q2_nonconformal_parallel_bddc.out
/petsc/src/snes/examples/tutorials/output/ex12_p4est_full_q2_nonconformal_parallel_bddcfas.out
/petsc/src/snes/examples/tutorials/output/ex12_p4est_solve_bddc.out
/petsc/src/snes/examples/tutorials/output/ex12_quad_bddc.out
/petsc/src/snes/examples/tutorials/output/ex12_tri_bddc.out
/petsc/src/snes/examples/tutorials/output/ex12_tri_bddc_parmetis.out
/petsc/src/snes/examples/tutorials/output/ex62_bddc_quad.out
/petsc/src/snes/examples/tutorials/output/ex62_fetidp_2d_quad.out
/petsc/src/snes/examples/tutorials/output/ex62_fetidp_2d_tri.out
/petsc/src/snes/examples/tutorials/output/ex62_fetidp_3d_hex.out
/petsc/src/snes/examples/tutorials/output/ex62_fetidp_3d_tet.out
/petsc/src/snes/examples/tutorials/output/ex69_p2p1fetidp.out
/petsc/src/snes/examples/tutorials/output/ex69_p2p1fetidp_allp.out
/petsc/src/snes/examples/tutorials/output/ex69_p2p1fetidp_deluxe.out
/petsc/src/snes/examples/tutorials/output/ex69_p2p1fetidp_deluxe_discharm.out
/petsc/src/snes/examples/tutorials/output/ex69_p2p1fetidp_discharm.out
/petsc/src/snes/examples/tutorials/output/ex69_p2p1fetidp_lumped.out
/petsc/src/snes/examples/tutorials/output/ex69_q2p1fetidp.out
/petsc/src/snes/examples/tutorials/output/ex69_q2p1fetidp_deluxe.out
/petsc/src/snes/examples/tutorials/output/ex69_q2p1fetidp_deluxe_adaptive.out
/petsc/src/vec/is/is/impls/general/general.c
/petsc/src/vec/is/utils/isltog.c
5ea309f307-Jul-2018 Barry Smith <bsmith@mcs.anl.gov>

Move PETSC_COMM_WORLD and PETSC_COMM_SELF from common blocks to petscsys module

Reason: Build on Apple with seperate libraries resulted in duplicate copies of the symbols (set to null).

Eventually

Move PETSC_COMM_WORLD and PETSC_COMM_SELF from common blocks to petscsys module

Reason: Build on Apple with seperate libraries resulted in duplicate copies of the symbols (set to null).

Eventually all the common block entries should be moved to the petscsys.h module. This is a test for next to find any problems.

Commit-type: portability-fix

show more ...


/petsc/config/BuildSystem/config/compilers.py
/petsc/config/BuildSystem/config/packages/petsc4py.py
/petsc/include/petsc/finclude/petscdm.h
/petsc/include/petsc/private/dmdaimpl.h
/petsc/include/petsc/private/dmimpl.h
/petsc/include/petsc/private/isimpl.h
/petsc/include/petscdm.h
/petsc/include/petscis.h
/petsc/include/petscmat.h
/petsc/include/petscmath.h
/petsc/src/dm/examples/tests/ex46.c
/petsc/src/dm/examples/tests/makefile
/petsc/src/dm/examples/tests/output/ex46_1.out
/petsc/src/dm/examples/tests/output/ex46_2.out
/petsc/src/dm/impls/da/da.c
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/da/dagetelem.c
/petsc/src/dm/impls/da/fdda.c
examples/tests/ex1f90.F90
examples/tests/ex2f90.F90
examples/tutorials/ex1f90.F90
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/ksp/examples/tutorials/output/ex59_bddc_fetidp_approximate.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex59_bddc_fetidp_ml_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex59_bddc_fetidp_ml_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex59_bddc_fetidp_ml_3.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_both_approx.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_deluxe_layers.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_dir_approx.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_neu_approx.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_fetidp_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_fetidp_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_fetidp_elast.out
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddc.h
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.h
/petsc/src/ksp/pc/impls/bddc/bddcschurs.c
/petsc/src/ksp/pc/impls/bddc/bddcstructs.h
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/is/matis.c
/petsc/src/mat/impls/maij/maij.c
/petsc/src/mat/interface/matreg.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/utils/gcreate.c
/petsc/src/snes/examples/tutorials/output/ex12_p4est_full_q2_nonconformal_parallel_bddc.out
/petsc/src/snes/examples/tutorials/output/ex12_p4est_full_q2_nonconformal_parallel_bddcfas.out
/petsc/src/snes/examples/tutorials/output/ex12_p4est_solve_bddc.out
/petsc/src/snes/examples/tutorials/output/ex12_quad_bddc.out
/petsc/src/snes/examples/tutorials/output/ex12_tri_bddc.out
/petsc/src/snes/examples/tutorials/output/ex12_tri_bddc_parmetis.out
/petsc/src/snes/examples/tutorials/output/ex62_bddc_quad.out
/petsc/src/snes/examples/tutorials/output/ex62_fetidp_2d_quad.out
/petsc/src/snes/examples/tutorials/output/ex62_fetidp_2d_tri.out
/petsc/src/snes/examples/tutorials/output/ex62_fetidp_3d_hex.out
/petsc/src/snes/examples/tutorials/output/ex62_fetidp_3d_tet.out
/petsc/src/snes/examples/tutorials/output/ex69_p2p1fetidp.out
/petsc/src/snes/examples/tutorials/output/ex69_p2p1fetidp_allp.out
/petsc/src/snes/examples/tutorials/output/ex69_p2p1fetidp_deluxe.out
/petsc/src/snes/examples/tutorials/output/ex69_p2p1fetidp_deluxe_discharm.out
/petsc/src/snes/examples/tutorials/output/ex69_p2p1fetidp_discharm.out
/petsc/src/snes/examples/tutorials/output/ex69_p2p1fetidp_lumped.out
/petsc/src/snes/examples/tutorials/output/ex69_q2p1fetidp.out
/petsc/src/snes/examples/tutorials/output/ex69_q2p1fetidp_deluxe.out
/petsc/src/snes/examples/tutorials/output/ex69_q2p1fetidp_deluxe_adaptive.out
/petsc/src/sys/f90-mod/petscsys.h
/petsc/src/sys/f90-mod/petscsysmod.F
/petsc/src/sys/fsrc/somefort.F
/petsc/src/sys/objects/ftn-custom/zstart.c
/petsc/src/sys/objects/ftn-custom/zstartf.c
/petsc/src/vec/is/is/impls/general/general.c
/petsc/src/vec/is/utils/isltog.c
f5d727b604-Jul-2018 Satish Balay <balay@mcs.anl.gov>

Merge remote-tracking branch 'origin/knepley/fix-plex-jacobian-action'

8b88522304-Jul-2018 Satish Balay <balay@mcs.anl.gov>

Merge remote-tracking branch 'origin/knepley/feature-plex-debugging'


/petsc/config/BuildSystem/config/compilers.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/hdf5.py
/petsc/config/BuildSystem/config/packages/petsc4py.py
/petsc/config/BuildSystem/config/packages/sowing.py
/petsc/config/PETSc/Configure.py
/petsc/gmakefile.test
/petsc/include/petsc/finclude/petscsys.h
/petsc/include/petsc/mpiuni/mpi.h
/petsc/include/petsc/private/dmpleximpl.h
/petsc/include/petsc/private/hashmap.h
/petsc/include/petsc/private/hashset.h
/petsc/include/petsc/private/matimpl.h
/petsc/include/petsc/private/pcgamgimpl.h
/petsc/include/petsc/private/petscfptimpl.h
/petsc/include/petsc/private/petscimpl.h
/petsc/include/petsc/private/snesimpl.h
/petsc/include/petsc/private/taoimpl.h
/petsc/include/petsc/private/taolinesearchimpl.h
/petsc/include/petsc/private/vecimpl.h
/petsc/include/petscksp.h
/petsc/include/petsclog.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/include/petscpctypes.h
/petsc/include/petscsnes.h
/petsc/include/petscsys.h
/petsc/include/petsctao.h
/petsc/include/petscversion.h
/petsc/lib/petsc/bin/maint/buildtest
/petsc/lib/petsc/bin/maint/confignightly/cg2
/petsc/lib/petsc/bin/maint/confignightly/si
/petsc/lib/petsc/bin/maint/confignightly/si2
/petsc/lib/petsc/bin/maint/confignightly/si3
/petsc/src/dm/examples/tutorials/ex11f90.F90
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/da/f90-custom/zda1f90.c
/petsc/src/dm/impls/da/grvtk.c
/petsc/src/dm/impls/forest/p4est/petsc_p4est_package.c
plexcreate.c
plexfem.c
/petsc/src/dm/interface/dlregisdmdm.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/manual/ArgonneReportTemplate.doc
/petsc/src/docs/tex/manual/ArgonneReportTemplate2018.docx
/petsc/src/docs/tex/manual/ArgonneReportTemplate2018LastPage.pdf
/petsc/src/docs/tex/manual/ArgonneReportTemplate2018Page2.pdf
/petsc/src/docs/tex/manual/ArgonneReportTemplateLastPage.pdf
/petsc/src/docs/tex/manual/ArgonneReportTemplatePage2.pdf
/petsc/src/docs/tex/manual/developers.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/download/index.html
/petsc/src/ksp/ksp/examples/tutorials/ex44f.F90
/petsc/src/ksp/ksp/examples/tutorials/ex6f.F90
/petsc/src/ksp/ksp/examples/tutorials/network/ex2.c
/petsc/src/ksp/ksp/examples/tutorials/output/ex15_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex15f_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex1_3.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex28_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex2_bjacobi_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex49_hypre_nullspace.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex67_nonsymmetric_left.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex67_nonsymmetric_right.out
/petsc/src/ksp/ksp/impls/fetidp/fetidp.c
/petsc/src/ksp/ksp/impls/gmres/agmres/agmres.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/impls/tsirm/tsirm.c
/petsc/src/ksp/ksp/interface/dlregisksp.c
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/ksp/ksp/interface/iterativ.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/utils/kspmatregi.c
/petsc/src/ksp/ksp/utils/lmvm/badbrdn/badbrdn.c
/petsc/src/ksp/ksp/utils/lmvm/badbrdn/makefile
/petsc/src/ksp/ksp/utils/lmvm/bfgs/bfgs.c
/petsc/src/ksp/ksp/utils/lmvm/bfgs/makefile
/petsc/src/ksp/ksp/utils/lmvm/brdn/brdn.c
/petsc/src/ksp/ksp/utils/lmvm/brdn/makefile
/petsc/src/ksp/ksp/utils/lmvm/dfp/dfp.c
/petsc/src/ksp/ksp/utils/lmvm/dfp/makefile
/petsc/src/ksp/ksp/utils/lmvm/lmvm.h
/petsc/src/ksp/ksp/utils/lmvm/lmvmimpl.c
/petsc/src/ksp/ksp/utils/lmvm/lmvmutils.c
/petsc/src/ksp/ksp/utils/lmvm/makefile
/petsc/src/ksp/ksp/utils/lmvm/sr1/makefile
/petsc/src/ksp/ksp/utils/lmvm/sr1/sr1.c
/petsc/src/ksp/ksp/utils/lmvm/symbrdn/makefile
/petsc/src/ksp/ksp/utils/lmvm/symbrdn/symbrdn.c
/petsc/src/ksp/ksp/utils/lmvm/symbrdn/symbrdn.h
/petsc/src/ksp/ksp/utils/makefile
/petsc/src/ksp/ksp/utils/schurm/makefile
/petsc/src/ksp/ksp/utils/schurm/schurm.c
/petsc/src/ksp/ksp/utils/schurm/schurm.h
/petsc/src/ksp/pc/examples/tests/output/ex6_1.out
/petsc/src/ksp/pc/impls/asm/asm.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddcscalingbasic.c
/petsc/src/ksp/pc/impls/factor/ilu/ilu.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/fieldsplit/ftn-custom/zfieldsplitf.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/classical.c
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/gamg/util.c
/petsc/src/ksp/pc/impls/ksp/pcksp.c
/petsc/src/ksp/pc/impls/lmvm/lmvmpc.c
/petsc/src/ksp/pc/impls/lmvm/makefile
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088fd00d02-Jul-2018 Matthew G. Knepley <knepley@gmail.com>

DM: Moved internal offset functions from Plex to DM


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/petsc/src/ts/interface/dlregists.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/trajectory/impls/memory/trajmemory.c
/petsc/src/vec/is/ao/interface/dlregisdm.c
/petsc/src/vec/is/is/interface/index.c
/petsc/src/vec/is/is/utils/isblock.c
/petsc/src/vec/is/sf/interface/dlregissf.c
/petsc/src/vec/pf/interface/pf.c
/petsc/src/vec/vec/examples/tests/output/ex32f_1.out
/petsc/src/vec/vec/examples/tests/output/ex41_1.out
/petsc/src/vec/vec/examples/tutorials/ex21.c
/petsc/src/vec/vec/examples/tutorials/output/ex4f_1.out
/petsc/src/vec/vec/interface/dlregisvec.c
/petsc/src/vec/vscat/impls/vpscat.c
/petsc/src/vec/vscat/impls/vpscat_mpi1.c
/petsc/src/vec/vscat/interface/dlregisvecscat.c
/petsc/src/vec/vscat/interface/vscreate.c
3a9f8b3e02-Jul-2018 Matthew G. Knepley <knepley@gmail.com>

Plex ex23: Fixed output

fe03635d01-Jul-2018 Karl Rupp <me@karlrupp.net>

Plex: Coding style fixes for pointer casts.

f2bb064f01-Jul-2018 Karl Rupp <me@karlrupp.net>

Plex: Fixed ex3 and ex19 for new DMPlexSNESComputeJacobianAction()

e7bcd63530-Jun-2018 Matthew G. Knepley <knepley@gmail.com>

Plex: Fixes for C++ and complex

c989281d30-Jun-2018 Matthew G. Knepley <knepley@gmail.com>

Merge branch 'master' into knepley/fix-plex-project-tests

* master: (477 commits)
Added correct report number for PETSc Developers Guide
Update PETSc Developers Guide title and final pages to ne

Merge branch 'master' into knepley/fix-plex-project-tests

* master: (477 commits)
Added correct report number for PETSc Developers Guide
Update PETSc Developers Guide title and final pages to new ANL style
Hash: Quick documentation fix
PetscBinaryViewerRead -> PetscViewerBinaryRead
cast in GAMG_HASH so that it works for PetscInt32 near PETSC_INT_MAX without overflow to negative numbers
Add link for DrMemory which may serve as an alternative to valgrind on Windows
Finish Gail's copyedits for developers manual.
openmpi: fix namespace conflict [with static build on ppc64le]
two pages of Gail's edits to developers guide
Another chapter of Gail's copyedits for the developers guide
Gail's copyedits on two more chapters of the developers guide
Fix more %d to %D in GAMG code. Fix code style in GAMG code
DMPlexVTK: vertices is int! need to use %d instead of %D
TS ex18: update outputs (reported by nightly tests)
Use %D in error messages for GAMG hash; fix style issues with GAMG hash
config: Update petsc4py git commit
Fix bad plain extern declaration.
Add Gail's copyedits for the initial portion of the developers guide
Add missing common block to subroutine
fix mpiuni tests with xl compilers
...

show more ...


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0c77aedc27-Jun-2018 Matthew G. Knepley <knepley@gmail.com>

Plex+Doc: Fixed associated manpages for some Plex options

2a546c9d27-Jun-2018 Matthew G. Knepley <knepley@gmail.com>

Merge branch 'master' into knepley/feature-pc-patch

* master: (107 commits)
cast in GAMG_HASH so that it works for PetscInt32 near PETSC_INT_MAX without overflow to negative numbers
Add link for

Merge branch 'master' into knepley/feature-pc-patch

* master: (107 commits)
cast in GAMG_HASH so that it works for PetscInt32 near PETSC_INT_MAX without overflow to negative numbers
Add link for DrMemory which may serve as an alternative to valgrind on Windows
Finish Gail's copyedits for developers manual.
openmpi: fix namespace conflict [with static build on ppc64le]
two pages of Gail's edits to developers guide
Another chapter of Gail's copyedits for the developers guide
Gail's copyedits on two more chapters of the developers guide
Fix more %d to %D in GAMG code. Fix code style in GAMG code
DMPlexVTK: vertices is int! need to use %d instead of %D
TS ex18: update outputs (reported by nightly tests)
Use %D in error messages for GAMG hash; fix style issues with GAMG hash
config: Update petsc4py git commit
Fix bad plain extern declaration.
Add Gail's copyedits for the initial portion of the developers guide
Add missing common block to subroutine
fix mpiuni tests with xl compilers
Copy & paste the change on PetscSparseDensePlusDot
Fix a wrong macro
PetscInfo: Add missing errorchecking
Log: various fixes and cleanups
...

Conflicts:
src/dm/impls/plex/plex.c

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/petsc/config/BuildSystem/config/compilers.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/MOAB.py
/petsc/config/BuildSystem/config/packages/hdf5.py
/petsc/config/BuildSystem/config/packages/petsc4py.py
/petsc/config/BuildSystem/config/packages/sowing.py
/petsc/config/PETSc/Configure.py
/petsc/gmakefile.test
/petsc/include/petsc/finclude/petscsys.h
/petsc/include/petsc/private/dmforestimpl.h
/petsc/include/petsc/private/dmlabelimpl.h
/petsc/include/petsc/private/dmpleximpl.h
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/petsc/include/petsc/private/hashmapi.h
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/petsc/include/petsc/private/pcgamgimpl.h
/petsc/include/petsc/private/petscimpl.h
/petsc/include/petsc/private/vecimpl.h
/petsc/include/petscdmplex.h
/petsc/include/petscdmtypes.h
/petsc/include/petsclog.h
/petsc/include/petscsys.h
/petsc/include/petscvec.h
/petsc/lib/petsc/bin/maint/buildtest
/petsc/lib/petsc/bin/maint/confignightly/cg2
/petsc/lib/petsc/bin/maint/confignightly/si
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/petsc/lib/petsc/bin/petsclogformat.py
/petsc/share/petsc/datafiles/meshes/hybrid_tetwedge.msh
/petsc/share/petsc/datafiles/meshes/hybrid_triquad.msh
/petsc/share/petsc/datafiles/meshes/surfacesphere_bin.msh
/petsc/src/dm/examples/tutorials/ex11f90.F90
/petsc/src/dm/impls/forest/p4est/petsc_p4est_package.c
examples/tests/ex1.c
examples/tests/ex4.c
examples/tests/output/ex1_2.out
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examples/tests/output/ex1_8.out
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examples/tests/output/ex1_cylinder.out
examples/tests/output/ex1_cylinder_per.out
examples/tests/output/ex1_cylinder_wedge.out
examples/tests/output/ex1_gmsh_10.out
examples/tests/output/ex1_gmsh_11.out
examples/tests/output/ex1_gmsh_13_hybs2t.out
examples/tests/output/ex1_gmsh_14_ext.out
examples/tests/output/ex1_gmsh_14_ext_s2t.out
examples/tests/output/ex1_gmsh_15_hyb3d.out
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examples/tests/output/ex1_gmsh_16_spheresurface.out
examples/tests/output/ex1_gmsh_16_spheresurface_extruded.out
examples/tests/output/ex1_gmsh_16_spheresurface_extruded_s2t.out
examples/tests/output/ex1_gmsh_16_spheresurface_s2t.out
examples/tests/output/ex1_gmsh_7.out
examples/tests/output/ex1_gmsh_8.out
examples/tests/output/ex1_gmsh_9.out
examples/tests/output/ex4_hybint_2d_0.out
examples/tests/output/ex4_hybint_2d_1.out
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examples/tests/output/ex4_hybint_3d_s2t_0.out
examples/tests/output/ex4_hybint_3d_s2t_1.out
glexg.c
plex.c
plexcreate.c
plexdistribute.c
plexexodusii.c
plexfem.c
plexgenerate.c
plexgmsh.c
plexinterpolate.c
plexpartition.c
plexrefine.c
plexvtk.c
plexvtu.c
/petsc/src/dm/impls/swarm/swarm.c
/petsc/src/dm/interface/dlregisdmdm.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/label/dmlabel.c
/petsc/src/docs/tex/manual/ArgonneReportTemplate.doc
/petsc/src/docs/tex/manual/ArgonneReportTemplateLastPage.pdf
/petsc/src/docs/tex/manual/ArgonneReportTemplatePage2.pdf
/petsc/src/docs/tex/manual/developers.tex
/petsc/src/docs/tex/manual/makefile
/petsc/src/docs/tex/manual/part1.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/download/index.html
/petsc/src/docs/website/index.html
/petsc/src/ksp/ksp/examples/tutorials/ex44f.F90
/petsc/src/ksp/ksp/examples/tutorials/ex6f.F90
/petsc/src/ksp/ksp/examples/tutorials/network/ex2.c
/petsc/src/ksp/ksp/impls/bcgs/fbcgsr/fbcgsr.c
/petsc/src/ksp/ksp/impls/gmres/agmres/agmres.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/impls/ibcgs/ibcgs.c
/petsc/src/ksp/ksp/interface/dlregisksp.c
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/pc/impls/asm/asm.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/factor/ilu/ilu.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/classical.c
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/gamg/util.c
/petsc/src/ksp/pc/impls/is/nn/nn.c
/petsc/src/ksp/pc/impls/mg/mgfunc.c
/petsc/src/ksp/pc/impls/patch/pcpatch.c
/petsc/src/ksp/pc/impls/telescope/telescope.c
/petsc/src/mat/examples/tutorials/ex15.c
/petsc/src/mat/examples/tutorials/output/ex15_3.out
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/petsc/src/mat/impls/aij/mpi/fdmpiaij.c
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/petsc/src/mat/impls/aij/seq/aijmkl/aijmkl.c
/petsc/src/mat/impls/aij/seq/aijperm/aijperm.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/blockmat/seq/blockmat.c
/petsc/src/mat/impls/is/matis.c
/petsc/src/mat/impls/mffd/ftn-custom/zmffdf.c
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/preallocator/matpreallocator.c
/petsc/src/mat/impls/sbaij/seq/relax.h
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/petsc/src/mat/interface/dlregismat.c
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/petsc/src/mat/partition/impls/party/party.c
/petsc/src/mat/partition/impls/pmetis/pmetis.c
/petsc/src/mat/partition/impls/scotch/scotch.c
/petsc/src/snes/examples/tutorials/ex99.c
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/petsc/src/ts/examples/tutorials/output/ex18_adv_0.out
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/petsc/src/ts/examples/tutorials/output/ex18_adv_3_ex.out
/petsc/src/ts/impls/explicit/rk/rk.c
/petsc/src/ts/interface/dlregists.c
/petsc/src/ts/trajectory/impls/memory/trajmemory.c
/petsc/src/vec/is/ao/interface/dlregisdm.c
/petsc/src/vec/is/sf/interface/dlregissf.c
/petsc/src/vec/is/sf/interface/sf.c
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/petsc/src/vec/pf/interface/pf.c
/petsc/src/vec/vec/examples/tutorials/ex21.c
/petsc/src/vec/vec/examples/tutorials/ex21f90.F90
/petsc/src/vec/vec/examples/tutorials/ex43.c
/petsc/src/vec/vec/examples/tutorials/ex43f.F90
/petsc/src/vec/vec/examples/tutorials/makefile
/petsc/src/vec/vec/examples/tutorials/output/ex43f_1.out
/petsc/src/vec/vec/interface/dlregisvec.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/comb.c
/petsc/src/vec/vec/utils/vinv.c
/petsc/src/vec/vscat/impls/vpscat.c
/petsc/src/vec/vscat/impls/vpscat_mpi1.c
/petsc/src/vec/vscat/impls/vscat.c
/petsc/src/vec/vscat/interface/dlregisvecscat.c
/petsc/src/vec/vscat/interface/vscreate.c
a93c429e27-Jun-2018 Matthew G. Knepley <knepley@gmail.com>

Plex: Adding a new kind of subdm

7db7e0a727-Jun-2018 Matthew G. Knepley <knepley@gmail.com>

Plex: Now Cohesive cell creation also returns a label that marks both sides of a fault

532e6d4b24-Jun-2018 Stefano Zampini <stefano.zampini@gmail.com>

DMPlexVTK: vertices is int! need to use %d instead of %D

I don't understand why I did not caught it locally on my machine

37595f6a15-Apr-2018 Stefano Zampini <stefano.zampini@gmail.com>

DMPLEX tests ex1: added various test cases

- fix cell shape computation to skip hybrid bounds
- fix standard deviation formula
- fixes for embedded meshes
- cylinder meshes
- hybrid interpolation
-

DMPLEX tests ex1: added various test cases

- fix cell shape computation to skip hybrid bounds
- fix standard deviation formula
- fixes for embedded meshes
- cylinder meshes
- hybrid interpolation
- VTK visualization for 3d wedges test case
- hybrid GMSH meshes
- extruded wedge mesh
- hybrid simplex2tensor
- surface mesh tests
- embedded 2d in 3d
- embedded 2d in 3d + simplex2tensor
- extruded
- extruded + simplex2tensor

show more ...

414947b318-Apr-2018 Stefano Zampini <stefano.zampini@gmail.com>

DMPlex tests ex4: added test cases for hybrid mesh interpolation and simplex2tensor

00dabe2823-Apr-2018 Stefano Zampini <stefano.zampini@gmail.com>

DMPlex: added utility routines to create extruded wedge meshes

the extrusion algorithm is quite naive, and it does not check for possible collisions

2dea115625-Apr-2018 Stefano Zampini <stefano.zampini@gmail.com>

DMPlex: fix ASCII VTK viewer in quad-precision

cc1750ac24-Apr-2018 Stefano Zampini <stefano.zampini@gmail.com>

DMPlex: DMPlexMigrate should also migrate the space dimension

d7eabd0323-Apr-2018 Stefano Zampini <stefano.zampini@gmail.com>

DMPlex: fix for debug checks

%d -> %D

a04427b423-Apr-2018 Stefano Zampini <stefano.zampini@gmail.com>

DMPlexView_Ascii: show hybrid bounds for cell-vertex meshes

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