| 562cbb2e | 12-Dec-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Plex ex26: Update to check ExodusII input and output |
| 78569bb4 | 12-Dec-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Plex+ExodusII: Added ExodusII viewer functions |
| 677605c3 | 12-Dec-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'knepley/feature-plex-adjoint-prelim' into knepley/feature-plex-exodus-update
* knepley/feature-plex-adjoint-prelim:
SNE ex13: Got adjoint solution and almost have a good error estima
Merge branch 'knepley/feature-plex-adjoint-prelim' into knepley/feature-plex-exodus-update
* knepley/feature-plex-adjoint-prelim:
SNE ex13: Got adjoint solution and almost have a good error estimate
Section: Fix init in PetscSectionCreateSupersection()
DM: Remove debugging view
SNES ex13: Updated output after fix
Section: If global section allocates bc indices, must copy them
Section: Cleaned up PetscSectionCreateGlobalSection() - Used local variable and added input checks
Bib: Added pages
Section: Fix leaks in DMCreateSuperDM()
SNES ex13: Adding adjoint capability
DM: Use new PetscGlobalMinMaxInt()
DM: Added DMCreateSuperDM()
Plex: Refactor computation of integrals over the domain - Added DMPlexComputeCellwiseIntegral()
PetscFE: Fix PetscFEIntegrate() for multicomponent integrals
Adaptor: Use new PetscGlobalMinMaxInt()
Section: Added PetscSectionCreateSupersection() - This merges several sections together
Vec+Doc: Fix docs for VecISAXPY()
Vec: Added VecISCopy() - Use ScatterMode to determine direction of copying
Sys: Added PetscGlobalMinMaxReal/Int()
Plex: Make preallocation debugging work in serial
show more ...
|
| b6ca5466 | 12-Dec-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-plex-adjoint-prelim
* master: (60 commits)
petsc4py: update to use latest 3.8 snapshot
petsc4py: update to snapshot that syncs with 276c550
fix warni
Merge branch 'master' into knepley/feature-plex-adjoint-prelim
* master: (60 commits)
petsc4py: update to use latest 3.8 snapshot
petsc4py: update to snapshot that syncs with 276c550
fix warning
Plex ex26: Protect ExodusII stuff
DM: DMCreateSubDM() field argument should be const
TS ex46: Newlines and some numerical jitter
TS ex45: Newlines and some numerical jitter
TS ex11: Fixed indentation and time step numbering
SNES ex12: Update for DM view changes
Plex tests: Update to new DM output
Plex ex23: Use Nc not dim for vector fields
Plex: Default section now ignores cells hanging off boundary meshes
Plex: Viewer now reports the cell Height
Increase patchlevel to 3.8.3
Plex: Fixed DMPlexInterpolate() bugs - Do not copy associated data if we are not interpolating - Do not interpolate if we already have full depth
fix valgrind errors with using PetscObjectGetName()/SetName() with the same object - resulting in a free() before copy.
ex4: fix compile warning and update makefile
Minor fixes
Improving report_tests
PetscDS: Must initialize the default adjacency
...
Conflicts:
include/petsc/private/dmimpl.h
include/petscdm.h
include/petscis.h
src/dm/impls/plex/plexcreate.c
show more ...
|
| b64f75a9 | 12-Dec-2017 |
Blaise Bourdin <bourdin@lsu.edu> |
Plex: For NtoG, we need to zero the output entries |
| 0e663481 | 12-Dec-2017 |
Blaise Bourdin <bourdin@lsu.edu> |
Plex: After creating GtoN map, set useNatural for parallel DM |
| c9fdaa05 | 12-Dec-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Plex: DMPlexVecRestoreClosure() now sets the input array to NULL |
| 22c1ee49 | 12-Dec-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Plex+Doc: Improve documentation of Closure functions |
| a9dcc6fa | 12-Dec-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-plex-exodus-update
* master:
petsc4py: update to use latest 3.8 snapshot
petsc4py: update to snapshot that syncs with 276c550
fix warning
Plex ex26
Merge branch 'master' into knepley/feature-plex-exodus-update
* master:
petsc4py: update to use latest 3.8 snapshot
petsc4py: update to snapshot that syncs with 276c550
fix warning
Plex ex26: Protect ExodusII stuff
DM: DMCreateSubDM() field argument should be const
TS ex46: Newlines and some numerical jitter
TS ex45: Newlines and some numerical jitter
TS ex11: Fixed indentation and time step numbering
SNES ex12: Update for DM view changes
Plex tests: Update to new DM output
Plex ex23: Use Nc not dim for vector fields
Plex: Default section now ignores cells hanging off boundary meshes
Plex: Viewer now reports the cell Height
DM: Check IS block size in DMCreateSubDM()
DM: DMCreateSubDM() should take a const array
Plex ex26: Test for FEM dof layout and DMCreateSubDM() Contributed-by: Blaise A Bourdin <bourdin@lsu.edu>
show more ...
|
| bb4988e0 | 11-Dec-2017 |
Satish Balay <balay@mcs.anl.gov> |
Merge remote-tracking branch 'origin/knepley/feature-subdm-test' |
| 32c3afb0 | 11-Dec-2017 |
Satish Balay <balay@mcs.anl.gov> |
Merge remote-tracking branch 'origin/knepley/fix-plex-multifield-eval' |
| c1753d77 | 11-Dec-2017 |
Satish Balay <balay@mcs.anl.gov> |
fix warning
Value stored to 'ierr' is never read |
| e84f7031 | 11-Dec-2017 |
Blaise Bourdin <bourdin@lsu.edu> |
Plex+ExodusII: properly set CPU word size
- This determines the size of coordinate values |
| 89e0eda7 | 11-Dec-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Plex ex26: Protect ExodusII stuff |
| 276c5506 | 11-Dec-2017 |
Matthew G. Knepley <knepley@gmail.com> |
DM: DMCreateSubDM() field argument should be const |
| 6495784d | 10-Dec-2017 |
Satish Balay <balay@mcs.anl.gov> |
Merge remote-tracking branch 'origin/knepley/fix-plex-interpolation-consistency' |
| 992de806 | 10-Dec-2017 |
Satish Balay <balay@mcs.anl.gov> |
Merge remote-tracking branch 'origin/pr800/haplav/haplav/feature-dmplex-ex5-set-partitioner-from-options/master' |
| 91908f75 | 10-Dec-2017 |
Satish Balay <balay@mcs.anl.gov> |
Merge remote-tracking branch 'origin/knepley/fix-plex-spectral-incomplete' |
| 4ba1c279 | 10-Dec-2017 |
Satish Balay <balay@mcs.anl.gov> |
Merge remote-tracking branch 'origin/knepley/fix-plex-multifield-eval' |
| a2ca5956 | 10-Dec-2017 |
Satish Balay <balay@mcs.anl.gov> |
Merge remote-tracking branch 'origin/knepley/fix-plex-fvm-adjacency' |
| b03a0753 | 10-Dec-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Plex tests: Update to new DM output |
| aa63a83d | 10-Dec-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Plex ex23: Use Nc not dim for vector fields |
| 470f9322 | 10-Dec-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Plex: Default section now ignores cells hanging off boundary meshes |
| f73eea6e | 10-Dec-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Plex: Viewer now reports the cell Height |
| b21b8912 | 10-Dec-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Plex: Fixed DMPlexInterpolate() bugs
- Do not copy associated data if we are not interpolating
- Do not interpolate if we already have full depth |