| bfaa5bdc | 15-Feb-2017 |
Toby Isaac <tisaac@uchicago.edu> |
DMPlexComputeInjectorReferenceTree(): fix indexing for finite volume
numChilren != number of children that are cells, also include interfaces |
| 31a2237e | 15-Feb-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Plex ex1: Added a cylinder test |
| 0510c589 | 15-Feb-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Plex: Added cylinder mesh |
| d6218766 | 15-Feb-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Plex: Some cleanup with mesh generation |
| 171f813e | 15-Feb-2017 |
Toby Isaac <tisaac@uchicago.edu> |
Merge remote-tracking branch 'origin/knepley/feature-fe-dual-apply' into tisaac/feature-fe-dual-apply
* origin/knepley/feature-fe-dual-apply: (75 commits)
Plex: Screwed up last fix
Plex: Fix ove
Merge remote-tracking branch 'origin/knepley/feature-fe-dual-apply' into tisaac/feature-fe-dual-apply
* origin/knepley/feature-fe-dual-apply: (75 commits)
Plex: Screwed up last fix
Plex: Fix overeager protection of function
PetscFE: Fixed declaration
Travis-CI: Attempt to solve issues with gfortran
Travis-CI: Use newer macOS image
clarify damping and other issues related to SNESLINESEARCHBASIC
change example in new harness to use simple partitioner so gets consistent output on all systems
remove unused function from test file
cleanup formatting in example, plus myrank not rank
all requires need to go on the same line in test definition otherwise they are skipped
missing - makes the manual page formatting wrong
The developer manual clearly states that MPI_Comm_size() returns size it doesn't return numProcs or other nonsense. Pretty soon you'll start using mype instead of rank?
fix typo and cut and paste error in docs
bugfix for !HYPRE
fix warning for ';;'
may switch to scalable only when B->cmap->N > 100000
MatLRC: store in the context the parallel matrices rather than the sequential ones
Bib: Add ref
set default algorithm based on B->cmap->N for MatMatMult_MPIAIJ_MPIAIJ()
Error in VecScatterView_MPI() had the meaning of from and to backwards
...
show more ...
|
| f6a3d38c | 15-Feb-2017 |
Toby Isaac <tisaac@uchicago.edu> |
mpiuni: disable tests that don't work with mpiuni
Some tests use only one processor but use parts of the mpi interface not covered by mpiuni |
| 08ecef28 | 15-Feb-2017 |
Toby Isaac <tisaac@uchicago.edu> |
Various tests complex scalar fixes |
| b16f39f5 | 15-Feb-2017 |
Toby Isaac <tisaac@uchicago.edu> |
Plex tests ex10: 64bit indices fix |
| c5eaf5f0 | 14-Feb-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'knepley/feature-plex-tests-new' into knepley/feature-fe-dual-apply
* knepley/feature-plex-tests-new: (73 commits)
Plex: Fix overeager protection of function
Travis-CI: Attempt to s
Merge branch 'knepley/feature-plex-tests-new' into knepley/feature-fe-dual-apply
* knepley/feature-plex-tests-new: (73 commits)
Plex: Fix overeager protection of function
Travis-CI: Attempt to solve issues with gfortran
Travis-CI: Use newer macOS image
clarify damping and other issues related to SNESLINESEARCHBASIC
change example in new harness to use simple partitioner so gets consistent output on all systems
remove unused function from test file
cleanup formatting in example, plus myrank not rank
all requires need to go on the same line in test definition otherwise they are skipped
missing - makes the manual page formatting wrong
The developer manual clearly states that MPI_Comm_size() returns size it doesn't return numProcs or other nonsense. Pretty soon you'll start using mype instead of rank?
fix typo and cut and paste error in docs
bugfix for !HYPRE
fix warning for ';;'
may switch to scalable only when B->cmap->N > 100000
MatLRC: store in the context the parallel matrices rather than the sequential ones
Bib: Add ref
set default algorithm based on B->cmap->N for MatMatMult_MPIAIJ_MPIAIJ()
Error in VecScatterView_MPI() had the meaning of from and to backwards
fix build warning as reported by the nightly tests
Update alquimia.py to use Glenn's branch that updates alquimia for pflotran xsdk
...
show more ...
|
| cffa9059 | 14-Feb-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-plex-tests-new
* master: (94 commits)
Plex: Fix overeager protection of function
Travis-CI: Attempt to solve issues with gfortran
Travis-CI: Use newe
Merge branch 'master' into knepley/feature-plex-tests-new
* master: (94 commits)
Plex: Fix overeager protection of function
Travis-CI: Attempt to solve issues with gfortran
Travis-CI: Use newer macOS image
clarify damping and other issues related to SNESLINESEARCHBASIC
change example in new harness to use simple partitioner so gets consistent output on all systems
remove unused function from test file
cleanup formatting in example, plus myrank not rank
missing - makes the manual page formatting wrong
The developer manual clearly states that MPI_Comm_size() returns size it doesn't return numProcs or other nonsense. Pretty soon you'll start using mype instead of rank?
fix typo and cut and paste error in docs
bugfix for !HYPRE
fix warning for ';;'
may switch to scalable only when B->cmap->N > 100000
MatLRC: store in the context the parallel matrices rather than the sequential ones
Bib: Add ref
set default algorithm based on B->cmap->N for MatMatMult_MPIAIJ_MPIAIJ()
Error in VecScatterView_MPI() had the meaning of from and to backwards
fix build warning as reported by the nightly tests
Update alquimia.py to use Glenn's branch that updates alquimia for pflotran xsdk
fix divide by zero exposed by 8534686b5096cd4c91a8f3895408b386c0628431 - and produced by petsc4py testsuite
...
Conflicts:
src/dm/impls/plex/examples/tests/ex13.c
src/dm/impls/plex/plexgmsh.c
src/snes/examples/tests/ex2.c
src/snes/examples/tests/output/ex2_3.out
src/snes/examples/tests/output/ex2_4.out
src/snes/examples/tests/output/ex2_5.out
show more ...
|
| 47920aae | 14-Feb-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Plex: Fix overeager protection of function |
| 40cf36b3 | 13-Feb-2017 |
Toby Isaac <tisaac@uchicago.edu> |
DMPlexReferenceToCoordinates_FE(): fix missing iteration over points |
| bf6ba3a3 | 11-Feb-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'knepley/feature-plex-gmsh-nodes'
* knepley/feature-plex-gmsh-nodes:
Plex+Gmsh: Read higher order cells and ignore extra nodes
Conflicts:
src/dm/impls/plex/plexgmsh.c |
| 7363b948 | 11-Feb-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'knepley/fix-plex-docs'
* knepley/fix-plex-docs:
Plex: Fix the fix
fix -Wmaybe-uninitialized
Doc+Plex: Add PetscUnit to Fortran
Doc+Plex: Fix function name
Plex: Fix declarati
Merge branch 'knepley/fix-plex-docs'
* knepley/fix-plex-docs:
Plex: Fix the fix
fix -Wmaybe-uninitialized
Doc+Plex: Add PetscUnit to Fortran
Doc+Plex: Fix function name
Plex: Fix declaration
Doc+Plex: Added function docs
Doc+Plex: More function docs - Make functions static - Move internal declarations
Doc+Plex: More function docs
Doc+Plex: Document DMPlexGetOrientedFace() and DMPlexSetSubpointMap() - Make functions static
Doc+Plex: Document DMPlexCreateOverlapMigrationSF() - Make functions static
Plex: Make functions static - Move internal declarations to private header
Plex: Make functions internal
Plex+HDF5: Make functions internal
Plex: Make functions static
Plex: Make functions static
Doc+Plex: Document DMPlexCreateNeighborCSR() - Make functions static
Doc+Plex: Document DMPlexPreallocateOperator() - Make functions static
Plex: Make function static
Plex+VTK: Make functions static
Plex+VTK: Make DMPlexVTKGetCellType() internal
Conflicts:
src/dm/impls/plex/plexvtk.c
show more ...
|
| 57ce482f | 11-Feb-2017 |
Barry Smith <bsmith@mcs.anl.gov> |
all requires need to go on the same line in test definition otherwise they are skipped
Reported-by: Matthew Knepley <knepley@gmail.com> |
| e9f60879 | 11-Feb-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'knepley/feature-plex-tests-new' into knepley/feature-fe-dual-apply
* knepley/feature-plex-tests-new:
TS ex47: Added test output
replace numProcs with standard size
# Please enter
Merge branch 'knepley/feature-plex-tests-new' into knepley/feature-fe-dual-apply
* knepley/feature-plex-tests-new:
TS ex47: Added test output
replace numProcs with standard size
# Please enter a commit message to explain why this merge is necessary,
# especially if it merges an updated upstream into a topic branch.
#
# Lines starting with '#' will be ignored, and an empty message aborts
# the commit.
show more ...
|
| 6cc25e06 | 11-Feb-2017 |
Barry Smith <bsmith@mcs.anl.gov> |
replace numProcs with standard size |
| 7c517de7 | 11-Feb-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Plex ex3: Fixed tests
- Moved Q2 to Plex
- Updated pest output |
| f6094492 | 11-Feb-2017 |
Matthew G. Knepley <knepley@gmail.com> |
DualSpace: Made Simple implementation multicomponent |
| 012b7cc6 | 11-Feb-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Plex: Tried to convert Toby's quad geometry |
| 9852e123 | 11-Feb-2017 |
Barry Smith <bsmith@mcs.anl.gov> |
The developer manual clearly states that MPI_Comm_size() returns size it doesn't return
numProcs or other nonsense. Pretty soon you'll start using mype instead of rank?
Using consistent names for va
The developer manual clearly states that MPI_Comm_size() returns size it doesn't return
numProcs or other nonsense. Pretty soon you'll start using mype instead of rank?
Using consistent names for variables makes code simpler to maintain
show more ...
|
| 0d366550 | 11-Feb-2017 |
Matthew G. Knepley <knepley@gmail.com> |
Plex: Fix for submesh orientation
- Has not been tested in 3D |
| 3058765e | 10-Feb-2017 |
Toby Isaac <tisaac@uchicago.edu> |
DMPlex tests ex3: skip expensive high order tests in nightly testing |
| 52a3aeb4 | 10-Feb-2017 |
Toby Isaac <tisaac@uchicago.edu> |
DMPlex: get non fv non-conforming tests working |
| 89c63b8e | 10-Feb-2017 |
Toby Isaac <tisaac@uchicago.edu> |
DMProjectPoint_Func_Private(): remove bad assertion
Sometimes (non-conforming, wie immer) things get evaluated on faces, we can't assume they are cells |