plex - OpenGrok history log for /petsc/src/dm/impls/plex

Revision	Date	Author	Comments (<<< Hide modified files) (Show modified files >>>)
3946a250	16-May-2016	Matthew G. Knepley <knepley@gmail.com>	Plex ex18: Added simplex 3D tests /petsc/bin/maint/buildtest /petsc/bin/maint/copylognightly /petsc/bin/maint/findvisibleprivatefunctions /petsc/bin/maint/runhtml.py /petsc/config/BuildSystem/config/packages/Matlab.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/builder.py /petsc/config/examples/arch-linux-pkgs-gcov.py /petsc/config/examples/arch-linux-uni.py /petsc/include/petsc/finclude/petscmatdef.h /petsc/include/petsc/private/linesearchimpl.h /petsc/include/petsc/private/matimpl.h /petsc/include/petsc/private/pcgamgimpl.h /petsc/include/petsc/private/vecimpl.h /petsc/include/petscmat.h /petsc/include/petscsnes.h /petsc/include/petscsys.h /petsc/include/petscversion.h /petsc/src/dm/examples/tests/ex11.c /petsc/src/dm/examples/tests/ex6.c /petsc/src/dm/examples/tutorials/ex5.c /petsc/src/dm/impls/da/dageometry.c /petsc/src/dm/impls/da/dalocal.c /petsc/src/dm/impls/forest/p4est/pforest.c /petsc/src/dm/impls/network/network.c examples/tests/ex18.c examples/tests/output/ex18_3.out examples/tests/output/ex18_4.out /petsc/src/dm/impls/sliced/sliced.c /petsc/src/docs/website/download/index.html /petsc/src/ksp/ksp/examples/tests/ex22.c /petsc/src/ksp/ksp/examples/tests/ex25.c /petsc/src/ksp/ksp/examples/tests/ex29.c /petsc/src/ksp/ksp/examples/tests/ex3.c /petsc/src/ksp/ksp/examples/tests/ex30.c /petsc/src/ksp/ksp/examples/tests/ex37.c /petsc/src/ksp/ksp/examples/tests/ex4.c /petsc/src/ksp/ksp/examples/tests/ex41.c /petsc/src/ksp/ksp/examples/tests/ex43.c /petsc/src/ksp/ksp/examples/tests/makefile /petsc/src/ksp/ksp/examples/tests/output/ex26_ml_2.out /petsc/src/ksp/ksp/examples/tests/output/ex26_ml_3.out /petsc/src/ksp/ksp/examples/tests/output/ex29.out /petsc/src/ksp/ksp/examples/tests/output/ex29_2.out /petsc/src/ksp/ksp/examples/tests/output/ex32_cholmod.out /petsc/src/ksp/ksp/examples/tests/output/ex32_cholmod_sbaij.out /petsc/src/ksp/ksp/examples/tutorials/ex12.c 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1d3ba1c4	16-May-2016	Matthew G. Knepley <knepley@gmail.com>	Merge branch 'knepley/fix-plex-namespace' * knepley/fix-plex-namespace: (24 commits) PlexTree: Fixed declaration for function which produce indices for assembly Plex: Forgot to zero out Jacobian Merge branch 'knepley/fix-plex-namespace' * knepley/fix-plex-namespace: (24 commits) PlexTree: Fixed declaration for function which produce indices for assembly Plex: Forgot to zero out Jacobian Plex: Changed every *_Internal() function to PETSC_INTERN - Except the residual and Jacobian computation which should not be internal Plex: Fixed declaration for function which produce indices for assembly Plex: clarify precedence DMForest tests ex2: typo fixes DMP4est: cleanup for DMForestTransferVec() DMP4est: fixes to DMPlexTranserVecTree_Inject() DMP4est: fixes to DMPlexTranserVecTree_Interpolate() DMPlex: correct usage of PetscSFCreateEmbeddedLeafSF() DMP4est: address extra vertices in transfers DMP4est: address missing vertices in transfers DMP4est: fix array initialization DMP4est: fix interface to nonuniform refinement DMP4est: interface to nonuniform refinement DMForest test ex2: leave data until end for debugging DMForest: added test for DMForestTransferVec() Plex: first pass at tree transfer interpolator. FVM missing Plex: finish first pass at injection component of transer DMPlex: further refactoring in injection code ... show more ... /petsc/bin/maint/buildtest /petsc/bin/maint/copylognightly /petsc/bin/maint/findvisibleprivatefunctions /petsc/bin/maint/runhtml.py /petsc/config/BuildSystem/config/packages/Matlab.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/BuildSystem/config/packages/xSDKTrilinos.py /petsc/config/builder.py /petsc/config/examples/arch-linux-pkgs-gcov.py /petsc/config/examples/arch-linux-uni.py /petsc/include/petsc/finclude/petscmatdef.h /petsc/include/petsc/private/dmforestimpl.h /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petsc/private/linesearchimpl.h /petsc/include/petsc/private/matimpl.h /petsc/include/petsc/private/pcgamgimpl.h /petsc/include/petsc/private/petscfeimpl.h /petsc/include/petsc/private/vecimpl.h /petsc/include/petscdmforest.h /petsc/include/petscdmplex.h /petsc/include/petscfe.h /petsc/include/petscmat.h 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/petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/ksp/ksp/utils/schurm.c /petsc/src/ksp/pc/examples/tests/ex2.c /petsc/src/ksp/pc/examples/tutorials/ex2.c /petsc/src/ksp/pc/examples/tutorials/makefile /petsc/src/ksp/pc/examples/tutorials/output/ex2_1.out /petsc/src/ksp/pc/impls/asm/asm.c /petsc/src/ksp/pc/impls/asm/ftn-custom/zasmf.c /petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c /petsc/src/ksp/pc/impls/gamg/agg.c /petsc/src/ksp/pc/impls/gamg/util.c /petsc/src/ksp/pc/impls/kaczmarz/kaczmarz.c /petsc/src/ksp/pc/impls/telescope/telescope.c /petsc/src/ksp/pc/impls/telescope/telescope_dmda.c /petsc/src/ksp/pc/impls/tfs/bitmask.c /petsc/src/ksp/pc/impls/tfs/gs.c /petsc/src/ksp/pc/impls/tfs/xxt.c /petsc/src/ksp/pc/impls/tfs/xyt.c /petsc/src/ksp/pc/interface/pcset.c /petsc/src/mat/color/impls/greedy/greedy.c /petsc/src/mat/color/impls/jp/jp.c /petsc/src/mat/color/interface/matcoloring.c /petsc/src/mat/color/utils/bipartite.c /petsc/src/mat/color/utils/valid.c 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/petsc/src/mat/impls/adj/mpi/mpiadj.c /petsc/src/mat/impls/adj/mpi/mpiadj.h /petsc/src/mat/impls/aij/mpi/clique/clique.cxx /petsc/src/mat/impls/aij/mpi/clique/matcliqueimpl.h /petsc/src/mat/impls/aij/mpi/mkl_cpardiso/mkl_cpardiso.c /petsc/src/mat/impls/aij/mpi/mpimatmatmult.c /petsc/src/mat/impls/aij/mpi/mpiptap.c /petsc/src/mat/impls/aij/mpi/mumps/mumps.c /petsc/src/mat/impls/aij/mpi/pastix/pastix.c /petsc/src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c /petsc/src/mat/impls/aij/seq/cholmod/aijcholmod.c /petsc/src/mat/impls/aij/seq/essl/essl.c /petsc/src/mat/impls/aij/seq/inode2.c /petsc/src/mat/impls/aij/seq/klu/klu.c /petsc/src/mat/impls/aij/seq/matlab/aijmatlab.c /petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c /petsc/src/mat/impls/aij/seq/superlu/superlu.c /petsc/src/mat/impls/aij/seq/umfpack/umfpack.c /petsc/src/mat/impls/baij/mpi/makefile /petsc/src/mat/impls/baij/mpi/mpibaij.c /petsc/src/mat/impls/baij/seq/aijbaij.c /petsc/src/mat/impls/baij/seq/baij.c 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/petsc/src/snes/linesearch/impls/bt/linesearchbt.c /petsc/src/snes/linesearch/impls/shell/linesearchshell.c /petsc/src/snes/linesearch/interface/linesearch.c /petsc/src/snes/utils/dmplexsnes.c /petsc/src/sys/classes/random/interface/randomc.c /petsc/src/sys/classes/viewer/interface/viewreg.c /petsc/src/sys/examples/tests/ex19.c /petsc/src/sys/examples/tests/ex21.c /petsc/src/sys/examples/tests/ex23.c /petsc/src/sys/examples/tutorials/ex9.c /petsc/src/sys/fileio/mprint.c /petsc/src/sys/memory/mtr.c /petsc/src/sys/objects/aoptions.c /petsc/src/sys/objects/ftn-custom/zstart.c /petsc/src/sys/objects/options.c /petsc/src/sys/objects/pinit.c /petsc/src/sys/utils/hash.h /petsc/src/sys/webclient/examples/tutorials/boxobtainrefreshtoken.c /petsc/src/sys/webclient/examples/tutorials/boxupload.c /petsc/src/sys/webclient/examples/tutorials/globusobtaintransfers.c /petsc/src/sys/webclient/examples/tutorials/googledriveupload.c /petsc/src/sys/webclient/examples/tutorials/googleobtainrefreshtoken.c /petsc/src/sys/webclient/examples/tutorials/urlshorten.c /petsc/src/tao/bound/impls/tron/tron.c /petsc/src/tao/bound/utils/isutil.c /petsc/src/tao/complementarity/examples/tutorials/blackscholes.c /petsc/src/tao/complementarity/examples/tutorials/minsurf1.c /petsc/src/tao/constrained/examples/tutorials/maros.c /petsc/src/tao/constrained/examples/tutorials/toy.c /petsc/src/tao/constrained/impls/ipm/ipm.c /petsc/src/tao/leastsquares/examples/tests/chwirut1.c /petsc/src/tao/leastsquares/examples/tutorials/chwirut1.c /petsc/src/tao/leastsquares/examples/tutorials/chwirut2.c /petsc/src/tao/matrix/adamat.c /petsc/src/tao/matrix/lmvmmat.c /petsc/src/tao/matrix/lmvmmat.h /petsc/src/tao/matrix/submatfree.c /petsc/src/tao/matrix/submatfree.h /petsc/src/tao/pde_constrained/examples/tutorials/elliptic.c /petsc/src/tao/pde_constrained/examples/tutorials/hyperbolic.c /petsc/src/tao/unconstrained/examples/tutorials/eptorsion1.c /petsc/src/tao/unconstrained/examples/tutorials/minsurf1.c /petsc/src/tao/unconstrained/examples/tutorials/minsurf2.c /petsc/src/tao/unconstrained/impls/bmrm/bmrm.c /petsc/src/tao/unconstrained/impls/neldermead/neldermead.c /petsc/src/tao/unconstrained/impls/nls/nls.c /petsc/src/tao/unconstrained/impls/ntl/ntl.c /petsc/src/tao/unconstrained/impls/ntr/ntr.c /petsc/src/ts/examples/tests/ex22.c /petsc/src/ts/examples/tests/ex3.c /petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex5.c /petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex5adj.c /petsc/src/ts/examples/tutorials/eimex/allen_cahn.c /petsc/src/ts/examples/tutorials/eimex/ct_vdp_imex.c /petsc/src/ts/examples/tutorials/ex1.c /petsc/src/ts/examples/tutorials/ex11.c /petsc/src/ts/examples/tutorials/ex11_sa.c /petsc/src/ts/examples/tutorials/ex12.c /petsc/src/ts/examples/tutorials/ex13.c /petsc/src/ts/examples/tutorials/ex15.c /petsc/src/ts/examples/tutorials/ex16adj.c /petsc/src/ts/examples/tutorials/ex16opt_ic.c /petsc/src/ts/examples/tutorials/ex16opt_p.c /petsc/src/ts/examples/tutorials/ex17.c /petsc/src/ts/examples/tutorials/ex18.c /petsc/src/ts/examples/tutorials/ex19.c /petsc/src/ts/examples/tutorials/ex20.c /petsc/src/ts/examples/tutorials/ex20adj.c /petsc/src/ts/examples/tutorials/ex20opt_ic.c /petsc/src/ts/examples/tutorials/ex20opt_p.c /petsc/src/ts/examples/tutorials/ex28.c /petsc/src/ts/examples/tutorials/ex29.c /petsc/src/ts/examples/tutorials/ex31.c /petsc/src/ts/examples/tutorials/ex32.c /petsc/src/ts/examples/tutorials/ex36.c /petsc/src/ts/examples/tutorials/ex36A.c /petsc/src/ts/examples/tutorials/ex36SE.c /petsc/src/ts/examples/tutorials/ex40.c /petsc/src/ts/examples/tutorials/ex42.c /petsc/src/ts/examples/tutorials/ex44.c /petsc/src/ts/examples/tutorials/network/wash/pipes1.c /petsc/src/ts/examples/tutorials/phasefield/biharmonic.c /petsc/src/ts/examples/tutorials/phasefield/biharmonic2.c /petsc/src/ts/examples/tutorials/phasefield/potentials.c /petsc/src/ts/examples/tutorials/power_grid/ex1.c /petsc/src/ts/examples/tutorials/power_grid/ex2.c /petsc/src/ts/examples/tutorials/power_grid/ex3.c /petsc/src/ts/examples/tutorials/power_grid/ex3adj.c /petsc/src/ts/examples/tutorials/power_grid/ex3opt.c /petsc/src/ts/examples/tutorials/power_grid/ex3opt_fd.c /petsc/src/ts/examples/tutorials/power_grid/ex7.c /petsc/src/ts/examples/tutorials/power_grid/ex8.c /petsc/src/ts/examples/tutorials/power_grid/ex9.c /petsc/src/ts/examples/tutorials/power_grid/ex9adj.c /petsc/src/ts/examples/tutorials/power_grid/ex9opt.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9bus.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt_fd.c /petsc/src/ts/interface/ts.c /petsc/src/ts/utils/dmplexts.c /petsc/src/vec/is/ao/examples/tests/ex1.c /petsc/src/vec/is/ao/examples/tests/ex2.c /petsc/src/vec/is/ao/examples/tests/ex3d/ex3.cxx /petsc/src/vec/is/ao/examples/tests/ex4.c /petsc/src/vec/is/ao/impls/memscalable/aomemscalable.c /petsc/src/vec/is/sf/examples/tutorials/ex2.c /petsc/src/vec/is/sf/interface/ftn-custom/zsf.c /petsc/src/vec/vec/examples/tests/ex34.c /petsc/src/vec/vec/examples/tests/ex37.c /petsc/src/vec/vec/examples/tests/ex4.c /petsc/src/vec/vec/examples/tests/ex41.c /petsc/src/vec/vec/examples/tests/ex44.c /petsc/src/vec/vec/examples/tests/makefile /petsc/src/vec/vec/examples/tests/output/ex41_1.out /petsc/src/vec/vec/examples/tutorials/ex15.c /petsc/src/vec/vec/examples/tutorials/ex19.c /petsc/src/vec/vec/impls/mpi/pvec2.c /petsc/src/vec/vec/interface/dlregisvec.c /petsc/src/vec/vec/utils/comb.c /petsc/src/vec/vec/utils/matlab/gcreatev.c /petsc/src/vec/vec/utils/vinv.c /petsc/tutorials/python/ex1.c
d39976ab	15-May-2016	Jose E. Roman <jroman@dsic.upv.es>	Update output files after change in PetscObjectPrintClassNamePrefixType /petsc/bin/maint/buildtest /petsc/bin/maint/copylognightly /petsc/bin/maint/findvisibleprivatefunctions /petsc/bin/maint/runhtml.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/Matlab.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/BuildSystem/config/packages/xSDKTrilinos.py /petsc/config/examples/arch-linux-pkgs-gcov.py /petsc/config/examples/arch-linux-uni.py /petsc/include/petsc/finclude/petscmatdef.h /petsc/include/petsc/private/linesearchimpl.h /petsc/include/petsc/private/matimpl.h /petsc/include/petsc/private/pcgamgimpl.h /petsc/include/petsc/private/petscfptimpl.h /petsc/include/petsc/private/vecimpl.h /petsc/include/petscmat.h /petsc/include/petscsnes.h /petsc/include/petscsys.h /petsc/include/petscversion.h /petsc/src/dm/examples/tests/ex11.c /petsc/src/dm/examples/tests/ex6.c /petsc/src/dm/examples/tests/makefile /petsc/src/dm/examples/tutorials/ex13f90.F90 /petsc/src/dm/examples/tutorials/ex5.c /petsc/src/dm/impls/da/dacorn.c /petsc/src/dm/impls/da/dageometry.c /petsc/src/dm/impls/da/daghost.c /petsc/src/dm/impls/da/dalocal.c /petsc/src/dm/impls/forest/examples/tutorials/ex1.c /petsc/src/dm/impls/forest/forest.c /petsc/src/dm/impls/forest/p4est/petsc_p4est_package.c /petsc/src/dm/impls/forest/p4est/pforest.c /petsc/src/dm/impls/network/network.c /petsc/src/dm/impls/patch/examples/tests/output/ex1_0.out /petsc/src/dm/impls/patch/examples/tests/output/ex1_1.out /petsc/src/dm/impls/patch/examples/tests/output/ex1_2.out /petsc/src/dm/impls/patch/examples/tests/output/ex1_3.out /petsc/src/dm/impls/patch/examples/tests/output/ex1_4.out examples/tests/output/ex12_1.out examples/tests/output/ex12_2.out examples/tests/output/ex12_3.out examples/tests/output/ex12_4.out examples/tests/output/ex12_5.out examples/tests/output/ex12_6.out examples/tests/output/ex12_7.out 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1d17a0a3	15-May-2016	Matthew G. Knepley <knepley@gmail.com>	Plex: deal correctly with off-process dof when calculating block size plex.c
ffd6914d	14-May-2016	Satish Balay <balay@mcs.anl.gov>	fix compile warnings plexinterpolate.c
c5e08f72	13-May-2016	Matthew G. Knepley <knepley@gmail.com>	Plex: Removed unused variable plexcreate.c /petsc/src/dm/label/dmlabel.c
0b7fa6ec	13-May-2016	barral <none@none.fr>	Adding tests for dmplex adaptation /petsc/config/builder.py examples/tests/ex19.c
98581c7a	13-May-2016	barral <none@none.fr>	Merge branch 'master' into barral/feature-dmplex-adapt /petsc/bin/maint/buildtest /petsc/bin/maint/copylognightly /petsc/bin/maint/getexlist /petsc/bin/maint/runhtml.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/BuildSystem/config/packages/xSDKTrilinos.py /petsc/config/examples/arch-linux-pkgs-gcov.py /petsc/include/petsc/finclude/petscerrordef.h /petsc/include/petscerror.h /petsc/include/petscvec.h /petsc/share/petsc/matlab/PetscBinaryRead.m /petsc/src/benchmarks/Index.c /petsc/src/benchmarks/MPI_Wtime.c /petsc/src/benchmarks/PLogEvent.c /petsc/src/benchmarks/PetscGetCPUTime.c /petsc/src/benchmarks/PetscGetTime.c /petsc/src/benchmarks/PetscMalloc.c /petsc/src/benchmarks/PetscMemcmp.c /petsc/src/benchmarks/PetscMemcpy.c /petsc/src/benchmarks/PetscMemzero.c /petsc/src/benchmarks/PetscTime.c /petsc/src/benchmarks/PetscVecNorm.c 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379fadc5	13-May-2016	barral <none@none.fr>	bdyLabelName arg should not be NULL plexadapt.c
f77c3375	13-May-2016	Matthew G. Knepley <knepley@gmail.com>	Plex: Fix for parallel interpolation plexinterpolate.c
e9e67ecc	13-May-2016	Matthew G. Knepley <knepley@gmail.com>	PlexTree: Fixed declaration for function which produce indices for assembly plextree.c
4808f530	13-May-2016	Matthew G. Knepley <knepley@gmail.com>	Merge remote-tracking branch 'origin/tisaac/ts-ex11-amr' into knepley/fix-plex-namespace * origin/tisaac/ts-ex11-amr: Plex: clarify precedence DMForest tests ex2: typo fixes DMP4est: cleanup f Merge remote-tracking branch 'origin/tisaac/ts-ex11-amr' into knepley/fix-plex-namespace * origin/tisaac/ts-ex11-amr: Plex: clarify precedence DMForest tests ex2: typo fixes DMP4est: cleanup for DMForestTransferVec() DMP4est: fixes to DMPlexTranserVecTree_Inject() DMP4est: fixes to DMPlexTranserVecTree_Interpolate() DMPlex: correct usage of PetscSFCreateEmbeddedLeafSF() DMP4est: address extra vertices in transfers DMP4est: address missing vertices in transfers DMP4est: fix array initialization DMP4est: fix interface to nonuniform refinement DMP4est: interface to nonuniform refinement DMForest test ex2: leave data until end for debugging DMForest: added test for DMForestTransferVec() Plex: first pass at tree transfer interpolator. FVM missing Plex: finish first pass at injection component of transer DMPlex: further refactoring in injection code DMPlex: refactor injector code for reuse DMForestTransferVec_p4est(): shift work to plex DMForest: start stub of DMForestTransferVec() TS ex11: proposed control flow for initial refinement show more ... /petsc/include/petsc/private/dmforestimpl.h /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petscdmforest.h /petsc/src/dm/impls/forest/examples/makefile /petsc/src/dm/impls/forest/examples/tests/ex2.c /petsc/src/dm/impls/forest/examples/tests/makefile /petsc/src/dm/impls/forest/forest.c /petsc/src/dm/impls/forest/p4est/pforest.c plextree.c /petsc/src/ts/examples/tutorials/ex11.c
0790e268	12-May-2016	Matthew G. Knepley <knepley@gmail.com>	Plex: Forgot to zero out Jacobian /petsc/include/petsc/private/dmpleximpl.h plexgeometry.c
415ce65a	12-May-2016	Matthew G. Knepley <knepley@gmail.com>	Plex: Fixed declaration for function which produce indices for assembly /petsc/config/BuildSystem/config/packages/xSDKTrilinos.py /petsc/src/dm/impls/da/dacorn.c /petsc/src/dm/impls/da/daghost.c plex.c plextree.c /petsc/src/docs/tex/petsc.bib /petsc/src/ksp/pc/impls/tfs/xyt.c /petsc/src/mat/examples/tests/ex94.c /petsc/src/mat/impls/aij/mpi/mpimatmatmult.c /petsc/src/mat/impls/aij/mpi/mpiptap.c /petsc/src/sys/classes/random/interface/randomc.c
9f4e70e1	12-May-2016	Toby Isaac <tisaac@uchicago.edu>	Plex: clarify precedence /petsc/src/dm/impls/forest/examples/tests/ex2.c plextree.c
deea36a5	12-May-2016	Matthew G. Knepley <knepley@gmail.com>	Plex: Fix default partition weighting plexpartition.c
304ab55f	12-May-2016	Matthew G. Knepley <knepley@gmail.com>	Plex: Fix support for ADD_BC_VALUES plex.c /petsc/src/dm/interface/dm.c
62d4dd39	12-May-2016	Matthew G. Knepley <knepley@gmail.com>	Plex: Allow incoming blocksize in DMCreateMatrix() plex.c
e7bcfa36	12-May-2016	Matthew G. Knepley <knepley@gmail.com>	Plex: Fix for blocksize in preallocation plexpreallocate.c /petsc/src/dm/interface/dm.c
6bd6c117	12-May-2016	Matthew G. Knepley <knepley@gmail.com>	Merge branch 'master' into knepley/feature-parallel-mesh-load * master: (180 commits) Bib: Added ref -random_view caused error because PetscRandomView() was not provided in PetscRandomCreate() Merge branch 'master' into knepley/feature-parallel-mesh-load * master: (180 commits) Bib: Added ref -random_view caused error because PetscRandomView() was not provided in PetscRandomCreate() Update the xSDKTrilinos test message to use interactive session and ctest gcc6: fix comple warnings with -Wmisleading-indentation fix compile warning bugfix for MatTransposeMatMultSymbolic_MPIAIJ_MPIAIJ_nonscalable() minor formatting cleanup of gamg.c add ml example to tutorials page for xsdk bugfix of MatDuplicate for mpiaij matrix product Reported-by: Miorelli, Federico <Federico.Miorelli@cgg.com> The deprecated -log_summary_exclude was still being used when it should have been -log_exclude cpardiso: requires mkl_blacs so check for that. Also common code to detect MKL for both pardiso and cpardiso cpardiso: fix segv and memory leaks resume MatGetSubMatrix_SeqSBAIJ() because it cannot share routine with BAIJ due to cast fix bad relative links replace MatSeqBAIJSetPreallocation_SeqBAIJ with MatSeqBAIJSetPreallocation to skip this call when input mat is sbaij type fix a variety of set but not used variables in examples detected by clang static analyzer removed declared but not used variable ANL Report formatting requires listing authors by affiliation DMP4est: uncrustify DMP4est: remove memset() ... show more ... /petsc/bin/maint/getexlist /petsc/bin/maint/update-docs.py /petsc/bin/petsc_conf.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/OpenMPI.py 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4fe3dfef	12-May-2016	Toby Isaac <tisaac@uchicago.edu>	DMP4est: cleanup for DMForestTransferVec() /petsc/src/dm/impls/forest/p4est/pforest.c plextree.c
7e96bdaf	11-May-2016	Toby Isaac <tisaac@uchicago.edu>	DMP4est: fixes to DMPlexTranserVecTree_Inject() plextree.c
4833aeb0	11-May-2016	Toby Isaac <tisaac@uchicago.edu>	DMP4est: fixes to DMPlexTranserVecTree_Interpolate() plextree.c
e4a60869	11-May-2016	Toby Isaac <tisaac@uchicago.edu>	DMPlex: correct usage of PetscSFCreateEmbeddedLeafSF() /petsc/src/dm/impls/forest/examples/makefile /petsc/src/dm/impls/forest/examples/tests/ex2.c /petsc/src/dm/impls/forest/examples/tests/makefile /petsc/src/dm/impls/forest/p4est/pforest.c plextree.c
8995e512	10-May-2016	Matthew G. Knepley <knepley@gmail.com>	Plex: Set block size regardless of whether the Mat has block storage /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/include/petsc/private/petscfptimpl.h /petsc/src/dm/examples/tutorials/ex13f90.F90 /petsc/src/dm/impls/forest/examples/tutorials/ex1.c /petsc/src/dm/impls/forest/forest.c /petsc/src/dm/impls/forest/p4est/petsc_p4est_package.c /petsc/src/dm/impls/forest/p4est/pforest.c plex.c /petsc/src/dm/interface/dlregisdmdm.c /petsc/src/docs/tex/manual/anlmanual.tex /petsc/src/docs/website/documentation/tutorials/HandsOnExercise.html /petsc/src/docs/website/documentation/tutorials/index.html /petsc/src/ksp/ksp/examples/tests/ex47.c /petsc/src/ksp/ksp/examples/tutorials/ex62.c /petsc/src/ksp/ksp/examples/tutorials/ex65.c /petsc/src/ksp/ksp/interface/dlregisksp.c /petsc/src/ksp/pc/impls/gamg/gamg.c /petsc/src/mat/examples/tests/ex198.c /petsc/src/mat/examples/tests/ex42.c /petsc/src/mat/examples/tests/ex47.c /petsc/src/mat/examples/tests/ex75.c /petsc/src/mat/examples/tests/ex93.c /petsc/src/mat/examples/tests/ex94.c /petsc/src/mat/examples/tests/makefile /petsc/src/mat/examples/tests/output/ex198.out /petsc/src/mat/impls/aij/mpi/mkl_cpardiso/mkl_cpardiso.c /petsc/src/mat/impls/aij/mpi/mpimatmatmult.c /petsc/src/mat/impls/aij/mpi/mpiptap.c /petsc/src/mat/impls/aij/seq/matmatmult.c /petsc/src/mat/impls/baij/seq/baij2.c /petsc/src/mat/impls/mffd/mffd.c /petsc/src/mat/impls/sbaij/seq/sbaij2.c /petsc/src/mat/interface/dlregismat.c /petsc/src/mat/interface/matrix.c /petsc/src/snes/examples/tutorials/ex35.c /petsc/src/snes/examples/tutorials/output/ex19_tut_8.out.html /petsc/src/snes/interface/dlregissnes.c /petsc/src/sys/classes/draw/interface/draw.c /petsc/src/sys/classes/viewer/interface/dlregispetsc.c /petsc/src/sys/classes/viewer/interface/view.c /petsc/src/sys/objects/pinit.c /petsc/src/tao/bound/examples/tutorials/jbearing2.c /petsc/src/tao/bound/examples/tutorials/plate2.c /petsc/src/tao/pde_constrained/examples/tutorials/parabolic.c /petsc/src/ts/characteristic/interface/slregis.c /petsc/src/ts/examples/tests/ex3.c /petsc/src/ts/examples/tutorials/ex1.c /petsc/src/ts/examples/tutorials/ex12.c /petsc/src/ts/examples/tutorials/ex22.c /petsc/src/ts/examples/tutorials/ex31.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busadj.c /petsc/src/ts/interface/dlregists.c /petsc/src/vec/is/ao/interface/dlregisdm.c /petsc/src/vec/is/sf/examples/tutorials/ex1.c /petsc/src/vec/pf/interface/pf.c /petsc/src/vec/vec/examples/tests/ex33.c /petsc/src/vec/vec/examples/tests/ex38.c /petsc/src/vec/vec/interface/dlregisvec.c
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