Merge branch 'knepley/fix-plex-distribute-label'

* knepley/fix-plex-distribute-label:
Plex ex11: Added another test of label distribution
Plex: Determination of stratum indices from strum values

Merge branch 'knepley/fix-plex-distribute-label'

* knepley/fix-plex-distribute-label:
Plex ex11: Added another test of label distribution
Plex: Determination of stratum indices from strum values was flawed

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Plex ex3: remove bad const qualifiers

DMP4est: skeleton for creating injection

Toby used an MPIU_MAX with an MPIU_INT

Time: .2 hours
Reported-by: nightly builds

Plex: Protected more user functions

Plex: Looks like array restore was in the wrong place

Merge branch 'master' into knepley/feature-plex-handle-func-failure

* master: (378 commits)
SNES ex5: Fix coordinate determination for empty subdomains
fixed petsc.bib entry
p4est: fix syntax

Merge branch 'master' into knepley/feature-plex-handle-func-failure

* master: (378 commits)
SNES ex5: Fix coordinate determination for empty subdomains
fixed petsc.bib entry
p4est: fix syntax error with error message
SNES ex5: Correct Jacobian handling on patches
SNES ex5: Stupid complex fixes
DMP4est: fix transfer of labels to parents
petsc4py: update to latest snapshot. Fixes da example breakage in petsc4py test suite
Plex: Correct setting of options on refined or coarsened meshes
Plex: Add info for grid hashing
Plex: Add logging in interpolator creation
Plex: Correct use of tabs in ASCII viewer
DM: Shorten long event name
Plex ex12: Create boundary label automatically at all levels of mesh hierarchy
Plex ex12: Change PetscViewerSetFormat --> PetscViewerPushFormat - Fix order of SetMode and SetFilename
Plex ex12: Change all functions to static
Since DMDA with periodic boundary conditions does support P0 interpolation remove checks that error out under those conditions
ascem-io.py and amanzi.py need to handle self.hdf5.include being None correctly
fix MPI Uni to recycle communicators so it won't run out like with the petsc4py tests also fix check for location of python shared library on mac to check all cases each time
Switch back to Sherry's version since she accepted by pull request
PetscDraw: Update help messages for -draw_save* options
...

Conflicts:
src/dm/impls/plex/plexfem.c

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Merge branch 'knepley/fix-plex-point-location'

* knepley/fix-plex-point-location:
Plex: Correct setting of options on refined or coarsened meshes
Plex: Add info for grid hashing
Plex: Add logg

Merge branch 'knepley/fix-plex-point-location'

* knepley/fix-plex-point-location:
Plex: Correct setting of options on refined or coarsened meshes
Plex: Add info for grid hashing
Plex: Add logging in interpolator creation
Plex: Correct use of tabs in ASCII viewer
DM: Shorten long event name
Plex ex12: Create boundary label automatically at all levels of mesh hierarchy
Plex ex12: Change PetscViewerSetFormat --> PetscViewerPushFormat - Fix order of SetMode and SetFilename
Plex ex12: Change all functions to static

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Plex ex11: Added another test of label distribution

Merge branch 'tisaac/dmforest'

* tisaac/dmforest: (36 commits)
DMP4est: fix transfer of labels to parents
DMPlexCreateInterpolatorTree: fix handling of global dofs (can be < 0)
DMPlexComputeIn

Merge branch 'tisaac/dmforest'

* tisaac/dmforest: (36 commits)
DMP4est: fix transfer of labels to parents
DMPlexCreateInterpolatorTree: fix handling of global dofs (can be < 0)
DMPlexComputeInterpolatorTree(): fix workspace size
DM: warn when no injection implemented
DMPlexComputeInterpolatorTree(): use row layout to preallocate
DMP4est: all processes agree on root type
DMPlexComputeInterpolatorTree(): valgrind fixes
DMP4est: reset childID if anctecedent is not parent
DMP4est: send labels from children to parents and bcast
DMForest: added DMForestGetAdaptivityPurpose()
DMP4est: enable caching of results of DMPforestGetTransferSF()
Plex: fix empty partition errors
DMPforestGetTransferSF_Internal(): handle different type roots on different processes
DMP4est: broadcast labels when transfering for agreement
PetscSFBasic: fix usage of MPI_Reduce_local
DMPforestLabelsInitialize(): search through parents when finding a point in the closure
DMP4est: try to connect high strata points when transfering
DMP4est: can't use PetscSFCreateSectionSF. It compresses when we don't want to
DMP4est: expand transfer sfs by the CellSF
DMP4est: add DMForestCreateCellSF_p4est
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Plex: Correct setting of options on refined or coarsened meshes

Plex: Add info for grid hashing

Plex: Add logging in interpolator creation

Plex: Correct use of tabs in ASCII viewer

Plex: Fixed missing include of header for VecView_Seq()

Reported-by: Matt Knepley via petsc-dev

Fix visibility issues in CUSP and VECCUDA

DMPlexCreateInterpolatorTree: fix handling of global dofs (can be < 0)

Merge branch 'knepley/fix-plex-pragmatic-marking'

* knepley/fix-plex-pragmatic-marking:
Plex: Update interface usage in pragmatic support

DMPlexComputeInterpolatorTree(): fix workspace size

DMPlexComputeInterpolatorTree(): use row layout to preallocate

DMPlexComputeInterpolatorTree(): valgrind fixes

const fixes for win32 warnings - related to 081a2d76edd0f29fad78624936ea4a95a96da0e2

Plex: Update interface usage in pragmatic support

Merge branch 'knepley/fix-plex-hdf5-label'

* knepley/fix-plex-hdf5-label:
Plex: Fixed HDF5 output for DMLabel - The ISAllGather() was being called with an IS that had COMM_SELF - Also, we needed t

Merge branch 'knepley/fix-plex-hdf5-label'

* knepley/fix-plex-hdf5-label:
Plex: Fixed HDF5 output for DMLabel - The ISAllGather() was being called with an IS that had COMM_SELF - Also, we needed to protect for empty index arrays

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Plex: fix empty partition errors