History log of /petsc/src/dm/impls/plex/ (Results 4101 – 4125 of 5874)
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23f34ed216-Feb-2016 Toby Isaac <tisaac@uchicago.edu>

Plex+FEM: fix recent changes to DMPlexComputeL2DiffVec()


/petsc/include/petscdm.h
/petsc/src/dm/impls/forest/p4est/pforest.c
plexfem.c
/petsc/src/dm/interface/dmget.c
ca3eba1b16-Feb-2016 Toby Isaac <tisaac@uchicago.edu>

Fix reference counting in DMGlobalToLocalSolve() and DMProjectFieldLocal_Plex()


/petsc/src/dm/impls/forest/p4est/pforest.c
plexfem.c
/petsc/src/ksp/ksp/utils/dmproject.c
/petsc/src/snes/utils/dmplexsnes.c
3162072616-Feb-2016 Toby Isaac <tisaac@uchicago.edu>

Plex: fix bad dereference in DMPlexAnchorsModifyMat()


plex.c
1c58ffc416-Feb-2016 Toby Isaac <tisaac@uchicago.edu>

Plex+Tree: small fixes to DMPlexComputeInterpolatorTree()


/petsc/src/dm/impls/forest/p4est/pforest.c
plextree.c
e44e4e7f16-Feb-2016 Toby Isaac <tisaac@uchicago.edu>

Plex+Tree: finished DMPlexCreateInterpolatorTree()


plextree.c
21968bf816-Feb-2016 Toby Isaac <tisaac@uchicago.edu>

WIP: factor out DMPlexReferenceTreeGetChildrenMatrices()


/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/BlasLapack.py
/petsc/config/BuildSystem/config/packages/MOAB.py
/petsc/config/BuildSystem/config/packages/MPICH.py
/petsc/config/BuildSystem/config/packages/OpenMPI.py
/petsc/config/BuildSystem/config/packages/PTScotch.py
/petsc/config/BuildSystem/config/packages/PaStiX.py
/petsc/config/BuildSystem/config/packages/Trilinos.py
/petsc/config/BuildSystem/config/packages/Zoltan.py
/petsc/config/BuildSystem/config/packages/alquimia.py
/petsc/config/BuildSystem/config/packages/amanzi.py
/petsc/config/BuildSystem/config/packages/ascem-io.py
/petsc/config/BuildSystem/config/packages/boost.py
/petsc/config/BuildSystem/config/packages/concurrencykit.py
/petsc/config/BuildSystem/config/packages/elemental.py
/petsc/config/BuildSystem/config/packages/exodusii.py
/petsc/config/BuildSystem/config/packages/make.py
/petsc/config/BuildSystem/config/packages/mstk.py
/petsc/config/BuildSystem/config/packages/pflotran.py
/petsc/config/BuildSystem/config/packages/unittestcpp.py
/petsc/config/BuildSystem/config/packages/viennacl.py
/petsc/config/BuildSystem/config/programs.py
/petsc/config/BuildSystem/config/sourceControl.py
/petsc/config/BuildSystem/retrieval.py
/petsc/config/PETSc/Configure.py
/petsc/config/builder.py
/petsc/config/configure.py
/petsc/config/examples/arch-linux-gcc-ifc-cmplx.py
/petsc/config/examples/arch-osx-xsdk-opt.py
/petsc/config/examples/arch-pardiso.py
/petsc/include/petsc/private/tsimpl.h
/petsc/include/petscpc.h
/petsc/include/petscts.h
/petsc/lib/petsc/conf/rules
/petsc/src/dm/impls/da/dagetelem.c
plextree.c
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/website/documentation/linearsolvertable.html
/petsc/src/docs/website/documentation/tutorials/index.html
/petsc/src/docs/website/index.html
/petsc/src/ksp/ksp/examples/tutorials/ex2.c
/petsc/src/ksp/ksp/impls/cg/cgls.c
/petsc/src/ksp/ksp/impls/lsqr/lsqr.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/mat/examples/tests/ex125.c
/petsc/src/mat/examples/tests/ex9.c
/petsc/src/mat/examples/tests/output/ex9_2.out
/petsc/src/mat/examples/tests/output/ex9_3.out
/petsc/src/mat/examples/tests/output/ex9_3_baij.out
/petsc/src/mat/examples/tests/output/ex9_3_sbaij.out
/petsc/src/mat/examples/tests/output/ex9_4_baij.out
/petsc/src/mat/examples/tests/output/ex9_4_sbaij.out
/petsc/src/mat/impls/aij/seq/umfpack/umfpack.c
/petsc/src/snes/impls/vi/rs/virs.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/examples/tutorials/power_grid/ex3adj.c
/petsc/src/ts/examples/tutorials/power_grid/ex3opt.c
/petsc/src/ts/examples/tutorials/power_grid/ex3opt_fd.c
/petsc/src/ts/examples/tutorials/power_grid/ex9adj.c
/petsc/src/ts/examples/tutorials/power_grid/ex9opt.c
/petsc/src/ts/examples/tutorials/power_grid/output/ex3opt_1.out
/petsc/src/ts/examples/tutorials/power_grid/output/ex3opt_fd_1.out
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/output/ex9busadj_1.out
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/output/ex9busopt_1.out
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/output/ex9busopt_fd_1.out
/petsc/src/ts/impls/explicit/rk/rk.c
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tscreate.c
/petsc/src/vec/is/is/utils/isdiff.c
46bdb39915-Feb-2016 Toby Isaac <tisaac@uchicago.edu>

WIP: DMPlexCreateInterpolatorTree()


/petsc/include/petscdmplex.h
plex.c
plexfem.c
plextree.c
6ecaa68a13-Feb-2016 Toby Isaac <tisaac@uchicago.edu>

WIP: DMPlexComputeInterpolatorTree()


/petsc/include/petsc/private/dmpleximpl.h
/petsc/include/petscdmplex.h
/petsc/src/dm/impls/forest/p4est/pforest.c
plex.c
plexfem.c
plextree.c
/petsc/src/ts/examples/tutorials/ex11.c
efe440bf12-Feb-2016 Matthew G. Knepley <knepley@gmail.com>

Plex: The CoordinateDM should not have constraints


/petsc/src/dm/impls/forest/forest.c
plex.c
/petsc/src/dm/interface/dm.c
/petsc/src/ksp/ksp/utils/dmproject.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/ex18.c
f2b8cce111-Feb-2016 Matthew G. Knepley <knepley@gmail.com>

Plex: ConstructGhost now propagates localized coordinates


/petsc/src/dm/impls/forest/p4est/pforest.c
plexsubmesh.c
0e2cc29a11-Feb-2016 Toby Isaac <tisaac@uchicago.edu>

Plex+Tree: factor out DMPlexCreateReferenceTree_Union()


/petsc/include/petsc/private/dmpleximpl.h
/petsc/include/petscdm.h
/petsc/src/dm/impls/forest/p4est/pforest.c
plextree.c
/petsc/src/dm/interface/dmget.c
/petsc/src/ksp/ksp/utils/dmproject.c
/petsc/src/snes/examples/tutorials/output/ex12_amr_0.out
/petsc/src/snes/examples/tutorials/output/ex12_amr_1.out
/petsc/src/ts/examples/tutorials/ex11.c
19f70fd510-Feb-2016 Toby Isaac <tisaac@uchicago.edu>

DMPlexAnchorsModifyMat(): fix bad access after loop


plex.c
4b2f227810-Feb-2016 Toby Isaac <tisaac@uchicago.edu>

DMPlexAnchorsModifyMat(): compress out empty points


plex.c
a909652010-Feb-2016 Toby Isaac <tisaac@uchicago.edu>

Plex: correct counting in indicesPointField_internal

I think it was offseting for constraints even when setBC = PETSC_TRUE,
which it shouldn't do.


/petsc/config/builder.py
/petsc/include/petscdmplex.h
/petsc/include/petscts.h
plex.c
/petsc/src/dm/interface/dm.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/ex18.c
/petsc/src/ts/examples/tutorials/output/ex11_p4est_advec_2d.out
/petsc/src/ts/utils/dmlocalts.c
/petsc/src/ts/utils/dmplexts.c
db4c39b108-Feb-2016 Toby Isaac <tisaac@uchicago.edu>

Plex: correct memory management in DMProjectFunctionLocal_Plex()


plexfem.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/ts/examples/tutorials/ex11.c
2036937508-Feb-2016 Toby Isaac <tisaac@uchicago.edu>

TS+Plex: provied face geometry for essential bcs


/petsc/include/petscdmplex.h
/petsc/include/petscts.h
plexfem.c
/petsc/src/snes/examples/tutorials/ex12.c
/petsc/src/snes/examples/tutorials/ex62.c
/petsc/src/snes/examples/tutorials/ex66.c
/petsc/src/snes/examples/tutorials/ex69.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/tao/examples/tutorials/ex1.c
/petsc/src/tao/examples/tutorials/ex2.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/ex18.c
/petsc/src/ts/utils/dmlocalts.c
/petsc/src/ts/utils/dmplexts.c
bdd6f66a07-Feb-2016 Toby Isaac <tisaac@uchicago.edu>

Plex: try to handle boundary conditions early


/petsc/config/builder.py
/petsc/include/petsc/private/petscdsimpl.h
/petsc/include/petsc/private/petscfeimpl.h
/petsc/include/petscdmplex.h
/petsc/include/petscds.h
/petsc/include/petscfe.h
/petsc/include/petscfetypes.h
/petsc/include/petscsnes.h
/petsc/src/dm/dt/interface/dtds.c
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/dt/interface/dtfv.c
/petsc/src/dm/impls/forest/examples/tutorials/ex1.c
/petsc/src/dm/impls/forest/forest.c
/petsc/src/dm/impls/forest/p4est/pforest.c
plex.c
plexfem.c
/petsc/src/snes/examples/tutorials/ex12.c
/petsc/src/snes/utils/dmlocalsnes.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/ex18.c
/petsc/src/ts/examples/tutorials/output/ex18_adv_1.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_delta_yper_0.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_delta_yper_1.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_delta_yper_2.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_delta_yper_fim_0.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_delta_yper_fim_1.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_delta_yper_fim_2.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_gauss.out
/petsc/src/ts/examples/tutorials/output/ex18_p1p1.out
/petsc/src/ts/examples/tutorials/output/ex18_p1p1_xper.out
/petsc/src/ts/examples/tutorials/output/ex18_p1p1_xper_ref.out
/petsc/src/ts/examples/tutorials/output/ex18_p1p1_xyper.out
/petsc/src/ts/examples/tutorials/output/ex18_p1p1_xyper_ref.out
/petsc/src/ts/examples/tutorials/output/ex18_p2p1.out
/petsc/src/ts/examples/tutorials/output/ex18_p2p1_xyper.out
/petsc/src/ts/examples/tutorials/output/ex18_p2p1_xyper_ref.out
/petsc/src/ts/utils/dmplexts.c
37d8113904-Feb-2016 Matthew G. Knepley <knepley@gmail.com>

Plex: Fixed refinement when mesh is empty on some ranks


plexrefine.c
a61e840b04-Feb-2016 Matthew G. Knepley <knepley@gmail.com>

Plex: Fixed coordinate copy


plexcreate.c
/petsc/src/dm/interface/dm.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/output/ex11_sw_0.out
c266e64304-Feb-2016 Matthew G. Knepley <knepley@gmail.com>

Plex: Fix collective mistake in DMProjectFunctionLocal_Plex()


plexfem.c
d0ed597304-Feb-2016 Matthew G. Knepley <knepley@gmail.com>

Plex: Use PetscDualSpaceApplyFVM() in PetscFunctionProjectLocal_Plex()


plexfem.c
cdf740e004-Feb-2016 Matthew G. Knepley <knepley@gmail.com>

Plex: Fixed coordinate copy for reference cell


/petsc/include/petscfv.h
/petsc/src/dm/dt/interface/dtfe.c
plexcreate.c
/petsc/src/dm/interface/dm.c
6186d1c304-Feb-2016 Matthew G. Knepley <knepley@gmail.com>

Plex: Fix API changes in ex1f90


/petsc/bin/maint/checkBuilds.py
/petsc/bin/maint/confignightly/grind3
/petsc/bin/maint/confignightly/ipro4
/petsc/config/BuildSystem/RDict.py
/petsc/config/BuildSystem/config/compilers.py
/petsc/config/BuildSystem/config/framework.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/BlasLapack.py
/petsc/config/BuildSystem/config/packages/Trilinos.py
/petsc/config/BuildSystem/config/packages/boost.py
/petsc/config/BuildSystem/config/packages/f2cblaslapack.py
/petsc/config/BuildSystem/config/packages/fblaslapack.py
/petsc/config/BuildSystem/config/packages/petsc4py.py
/petsc/config/BuildSystem/retrieval.py
/petsc/config/BuildSystem/script.py
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/options/dataFilesPath.py
/petsc/config/examples/arch-linux-xsdk-dbg.py
/petsc/config/examples/arch-osx-xsdk-opt.py
/petsc/include/petsc/private/dmnetworkimpl.h
/petsc/include/petsc/private/kernels/blockinvert.h
/petsc/include/petsc/private/tsimpl.h
/petsc/include/petsc/private/viewerimpl.h
/petsc/include/petscblaslapack.h
/petsc/include/petscblaslapack_mangle.h
/petsc/include/petsccusp.h
/petsc/include/petscts.h
/petsc/include/petscvec.h
/petsc/lib/petsc/conf/rules
/petsc/src/dm/impls/network/network.c
examples/tutorials/ex1f90.F
/petsc/src/docs/tex/petscapp.bib
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tutorials/ex10.c
/petsc/src/ksp/ksp/examples/tutorials/ex52.c
/petsc/src/ksp/ksp/utils/schurm.c
/petsc/src/ksp/pc/impls/bicgstabcusp/bicgstabcusp.cu
/petsc/src/ksp/pc/impls/hypre/hypre.c
/petsc/src/ksp/pc/impls/pbjacobi/pbjacobi.c
/petsc/src/mat/examples/tests/ex9.c
/petsc/src/mat/examples/tests/output/ex9_3.out
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/inode.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/baij/seq/baijfact.c
/petsc/src/mat/impls/baij/seq/baijfact11.c
/petsc/src/mat/impls/baij/seq/baijfact13.c
/petsc/src/mat/impls/baij/seq/baijfact2.c
/petsc/src/mat/impls/baij/seq/baijfact4.c
/petsc/src/mat/impls/baij/seq/baijfact5.c
/petsc/src/mat/impls/baij/seq/baijfact7.c
/petsc/src/mat/impls/baij/seq/baijfact9.c
/petsc/src/mat/impls/baij/seq/dgefa.c
/petsc/src/mat/impls/baij/seq/dgefa2.c
/petsc/src/mat/impls/baij/seq/dgefa3.c
/petsc/src/mat/impls/baij/seq/dgefa4.c
/petsc/src/mat/impls/baij/seq/dgefa5.c
/petsc/src/mat/impls/baij/seq/dgefa6.c
/petsc/src/mat/impls/baij/seq/dgefa7.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact10.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact11.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact12.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact3.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact4.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact5.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact6.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact7.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact8.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact9.c
/petsc/src/mat/interface/matreg.c
/petsc/src/mat/interface/matregis.c
/petsc/src/snes/examples/tutorials/network/pflow/PFReadData.c
/petsc/src/snes/examples/tutorials/network/pflow/makefile
/petsc/src/snes/examples/tutorials/network/pflow/output/pf.out
/petsc/src/snes/examples/tutorials/network/pflow/pf.c
/petsc/src/snes/examples/tutorials/network/pflow/pf.h
/petsc/src/snes/examples/tutorials/network/pflow/pfoptions
/petsc/src/sys/classes/viewer/interface/viewa.c
/petsc/src/sys/objects/init.c
/petsc/src/ts/examples/tutorials/ex9.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/examples/tutorials/network/wash/makefile
/petsc/src/ts/examples/tutorials/network/wash/output/pipes1_1.out
/petsc/src/ts/examples/tutorials/network/wash/output/pipes1_4.out
/petsc/src/ts/examples/tutorials/network/wash/output/pipes1_7.out
/petsc/src/ts/examples/tutorials/network/wash/pipe.h
/petsc/src/ts/examples/tutorials/network/wash/pipeImpls.c
/petsc/src/ts/examples/tutorials/network/wash/pipeInterface.c
/petsc/src/ts/examples/tutorials/network/wash/pipes1.c
/petsc/src/ts/examples/tutorials/network/wash/wash.h
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/trajectory/impls/memory/trajmemory.c
/petsc/src/ts/trajectory/interface/traj.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
/petsc/src/vec/vec/impls/seq/seqcusp/cuspvecimpl.h
/petsc/src/vec/vec/impls/seq/seqcusp/makefile
/petsc/src/vec/vec/impls/seq/seqcusp/veccusp.c
/petsc/src/vec/vec/impls/seq/seqcusp/veccusp2.cu
36447a5e03-Feb-2016 Toby Isaac <tisaac@uchicago.edu>

DMPlex: propagate coordinate localization


/petsc/bin/petsc_gen_xdmf.py
/petsc/include/petsc/private/dmforestimpl.h
/petsc/include/petscdm.h
/petsc/src/dm/impls/forest/forest.c
/petsc/src/dm/impls/forest/p4est/pforest.c
plexgenerate.c
/petsc/src/dm/interface/dm.c
/petsc/src/snes/examples/tutorials/output/ex12_42.out
/petsc/src/snes/examples/tutorials/output/ex12_fas_newton_0.out
/petsc/src/snes/examples/tutorials/output/ex12_tri_q2q1_asm_lu.out
/petsc/src/snes/examples/tutorials/output/ex12_tri_q2q1_asm_sor.out
/petsc/src/snes/examples/tutorials/output/ex12_tri_q2q1_msm_lu.out
/petsc/src/snes/examples/tutorials/output/ex12_tri_q2q1_msm_sor.out
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/utils/dmplexts.c
f19733c502-Feb-2016 Toby Isaac <tisaac@uchicago.edu>

Plex: fix bad indexing in anchors calculations


plex.c
/petsc/src/dm/interface/dm.c

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