plex - OpenGrok history log for /petsc/src/dm/impls/plex

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d56a2bef	09-Jun-2014	Matthew G. Knepley <knepley@gmail.com>	Merge branch 'knepley/feature-problem-class' into knepley/fix-fe-gpu * knepley/feature-problem-class: PetscDS: Renamed from PetscProblem ftn-types: fix compilers errors with PetscSection [remove Merge branch 'knepley/feature-problem-class' into knepley/fix-fe-gpu * knepley/feature-problem-class: PetscDS: Renamed from PetscProblem ftn-types: fix compilers errors with PetscSection [remove duplicate code from petscvec*.h90] PetscSection: Fix Fortran datatypes support DMPlex: Added quads to cell refiner transform support DMPlex ex3: Updated to Problem interface DMDA: Fixed FE projection functions show more ... /petsc/include/finclude/ftn-custom/petscisdef.h90 /petsc/include/finclude/ftn-custom/petscvecdef.h90 /petsc/include/finclude/ftn-custom/petscvechide.h90 /petsc/include/finclude/petscdmdef.h /petsc/include/petsc-private/dmimpl.h /petsc/include/petsc-private/petscdsimpl.h /petsc/include/petsc-private/petscfeimpl.h /petsc/include/petscdm.h /petsc/include/petscdmda.h /petsc/include/petscds.h /petsc/include/petscdstypes.h /petsc/include/petscfe.h /petsc/src/dm/dt/interface/dtds.c /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/dt/interface/makefile /petsc/src/dm/impls/composite/pack.c /petsc/src/dm/impls/da/dalocal.c examples/tests/ex3.c plexfem.c plexrefine.c /petsc/src/dm/interface/dlregisdmdm.c /petsc/src/dm/interface/dm.c /petsc/src/dm/interface/dmi.c /petsc/src/dm/interface/dmregall.c /petsc/src/snes/examples/tutorials/ex12.c /petsc/src/snes/examples/tutorials/ex62.c
2764a2aa	09-Jun-2014	Matthew G. Knepley <knepley@gmail.com>	PetscDS: Renamed from PetscProblem /petsc/include/finclude/ftn-custom/petscisdef.h90 /petsc/include/finclude/ftn-custom/petscvecdef.h90 /petsc/include/finclude/ftn-custom/petscvechide.h90 /petsc/include/finclude/petscdmdef.h /petsc/include/petsc-private/dmimpl.h /petsc/include/petsc-private/petscdsimpl.h /petsc/include/petsc-private/petscfeimpl.h /petsc/include/petscdm.h /petsc/include/petscds.h /petsc/include/petscdstypes.h /petsc/include/petscfe.h /petsc/src/dm/dt/interface/dtds.c /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/dt/interface/makefile /petsc/src/dm/impls/composite/pack.c /petsc/src/dm/impls/da/dalocal.c plexfem.c /petsc/src/dm/interface/dlregisdmdm.c /petsc/src/dm/interface/dm.c /petsc/src/dm/interface/dmi.c /petsc/src/dm/interface/dmregall.c /petsc/src/snes/examples/tutorials/ex12.c /petsc/src/snes/examples/tutorials/ex62.c
aa7da3c4	08-Jun-2014	Matthew G. Knepley <knepley@gmail.com>	DMPlex: Fixed allocation plexfem.c
7c927364	07-Jun-2014	Matthew G. Knepley <knepley@gmail.com>	DMPlex: Support for injection from more complicated discretizations - Added DMPlexMatGetClosureIndicesRefined() - Added DMPlexComputeInjectorFEM() - Fixed check /petsc/include/petscdmplex.h /petsc/src/dm/dt/interface/dtfe.c plex.c plexfem.c
80389061	07-Jun-2014	Matthew G. Knepley <knepley@gmail.com>	DMPlex: Added CellRefinerInCellTest_Internal() /petsc/include/petsc-private/dmpleximpl.h plexrefine.c
0c010903	07-Jun-2014	Matthew G. Knepley <knepley@gmail.com>	Merge branch 'knepley/feature-problem-class' into knepley/feature-quad-fas * knepley/feature-problem-class: (38 commits) PetscSection: Fix Fortran datatypes support DMPlex: Added quads to cell r Merge branch 'knepley/feature-problem-class' into knepley/feature-quad-fas * knepley/feature-problem-class: (38 commits) PetscSection: Fix Fortran datatypes support DMPlex: Added quads to cell refiner transform support DMPlex ex3: Updated to Problem interface DMDA: Fixed FE projection functions PetscSection: Fixes for Fortran stubs DMPlex+TS+Doc: Function docs PetscSection: Fortran bindings DMPlex+HDF5: Had revered handedness of transformed periodic coordinates DMPlex+HDF5: Preserve aspect ratio with remapping of periodic coordinates DMPlex: Added missing declarations Sys+DMDT: Added PetscValidFunction() DMPlex: Fix for DMPlexProjectField() DMPlex+HDF5: Selectively output fields for viz - Fields with NULL name are ignored PetscSection: Allow NULL names DMPlex: Fixes for DMPlexProjectField() PetscProblem: Added scalar integral (objective function) - Added PetscProblemGet/SetObjective() - Used in PetscFEIntegrate() - Reworked PetscProblemEnlarge_Static() DM+DT: Adding Fortran bindings PetscViewer: Added HDF_VIZ format to names PetscFE+OpenCL: Make more respectable elasticity PetscFE+OpenCL: Add flag for printing kernel ... show more ... /petsc/bin/maint/findvisibleprivatefunctions /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/boost.py /petsc/config/BuildSystem/config/packages/cusp.py /petsc/config/BuildSystem/config/packages/f2cblaslapack.py /petsc/config/BuildSystem/config/packages/fblaslapack.py /petsc/config/BuildSystem/config/packages/fiat.py /petsc/config/BuildSystem/config/packages/hdf5.py /petsc/config/BuildSystem/config/packages/make.py /petsc/config/BuildSystem/config/packages/scientificpython.py /petsc/config/BuildSystem/config/packages/thrust.py /petsc/config/PETSc/packages/Chaco.py /petsc/config/PETSc/packages/Generator.py /petsc/config/PETSc/packages/MUMPS.py /petsc/config/PETSc/packages/SuperLU.py /petsc/config/PETSc/packages/SuperLU_DIST.py /petsc/config/PETSc/packages/X.py /petsc/config/PETSc/packages/c2html.py /petsc/config/PETSc/packages/clique.py /petsc/config/PETSc/packages/cmake.py /petsc/config/PETSc/packages/cuda.py /petsc/config/PETSc/packages/elemental.py /petsc/config/PETSc/packages/glut.py /petsc/config/PETSc/packages/hwloc.py /petsc/config/PETSc/packages/hypre.py /petsc/config/PETSc/packages/metis.py /petsc/config/PETSc/packages/ml.py /petsc/config/PETSc/packages/opencl.py /petsc/config/PETSc/packages/opengl.py /petsc/config/PETSc/packages/openmp.py /petsc/config/PETSc/packages/parmetis.py /petsc/config/PETSc/packages/pcbddc.py /petsc/config/PETSc/packages/pthread.py /petsc/config/PETSc/packages/scalapack.py /petsc/config/PETSc/packages/sowing.py /petsc/config/PETSc/packages/ssl.py /petsc/config/PETSc/packages/valgrind.py /petsc/config/PETSc/packages/viennacl.py /petsc/include/finclude/ftn-custom/petscis.h90 /petsc/include/finclude/ftn-custom/petscisdef.h90 /petsc/include/finclude/ftn-custom/petscishide.h90 /petsc/include/finclude/petscdmdef.h /petsc/include/mpiuni/mpi.h /petsc/include/petsc-private/dmimpl.h /petsc/include/petsc-private/dmnetworkimpl.h /petsc/include/petsc-private/petscfeimpl.h /petsc/include/petsc-private/petscimpl.h /petsc/include/petsc-private/petscproblemimpl.h /petsc/include/petsc-private/vecimpl.h /petsc/include/petscdm.h /petsc/include/petscdmda.h /petsc/include/petscdmnetwork.h /petsc/include/petscdmplex.h /petsc/include/petscfe.h /petsc/include/petscpc.h /petsc/include/petscproblem.h /petsc/include/petscproblemtypes.h /petsc/include/petscsys.h /petsc/include/petsctao.h /petsc/include/petscvec.h /petsc/src/benchmarks/streams/BasicVersion.c /petsc/src/benchmarks/streams/MPIVersion.c /petsc/src/benchmarks/streams/PthreadVersion.c /petsc/src/benchmarks/streams/SSEVersion.c /petsc/src/contrib/nightlysummary/runhtml.py /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/dt/interface/dtfv.c /petsc/src/dm/dt/interface/dtproblem.c /petsc/src/dm/dt/interface/makefile /petsc/src/dm/impls/composite/pack.c /petsc/src/dm/impls/da/dalocal.c /petsc/src/dm/impls/makefile /petsc/src/dm/impls/network/makefile /petsc/src/dm/impls/network/network.c /petsc/src/dm/impls/network/networkcreate.c examples/tests/ex3.c examples/tutorials/ex3f90.F ftn-custom/makefile ftn-custom/zplexexodusii.c ftn-custom/zplexsubmesh.c plex.c plexfem.c plexhdf5.c plexrefine.c /petsc/src/dm/interface/dlregisdmdm.c /petsc/src/dm/interface/dm.c /petsc/src/dm/interface/dmi.c /petsc/src/dm/interface/dmregall.c /petsc/src/docs/tex/manual/part2.tex /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/docs/website/documentation/installation.html /petsc/src/docs/website/documentation/linearsolvertable.html /petsc/src/docs/website/documentation/taosolvertable.html /petsc/src/ksp/ksp/examples/tutorials/ex52.c /petsc/src/ksp/ksp/examples/tutorials/ex52f.F /petsc/src/ksp/ksp/examples/tutorials/makefile /petsc/src/ksp/ksp/examples/tutorials/output/ex52f_1.out /petsc/src/ksp/ksp/utils/schurm.c /petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c /petsc/src/mat/impls/aij/mpi/mumps/mumps.c /petsc/src/mat/impls/aij/seq/klu/klu.c /petsc/src/snes/examples/tutorials/ex12.c /petsc/src/snes/examples/tutorials/ex62.c /petsc/src/snes/examples/tutorials/makefile /petsc/src/snes/examples/tutorials/network/makefile /petsc/src/snes/examples/tutorials/network/pflow/PFReadData.c /petsc/src/snes/examples/tutorials/network/pflow/datafiles/case9.m /petsc/src/snes/examples/tutorials/network/pflow/makefile /petsc/src/snes/examples/tutorials/network/pflow/pf.c /petsc/src/snes/examples/tutorials/network/pflow/pf.h /petsc/src/snes/examples/tutorials/network/pflow/pfoptions /petsc/src/snes/impls/fas/fasfunc.c /petsc/src/sys/classes/viewer/interface/viewa.c /petsc/src/sys/mpiuni/mpi.c /petsc/src/sys/mpiuni/mpitime.c /petsc/src/sys/totalview/tv_data_display.c /petsc/src/sys/totalview/tv_data_display.h /petsc/src/tao/bound/impls/blmvm/blmvm.c /petsc/src/tao/bound/impls/blmvm/makefile /petsc/src/tao/bound/impls/bqpip/bqpip.c /petsc/src/tao/bound/impls/bqpip/makefile /petsc/src/tao/bound/impls/gpcg/gpcg.c /petsc/src/tao/bound/impls/gpcg/makefile /petsc/src/tao/bound/impls/tron/makefile /petsc/src/tao/bound/impls/tron/tron.c /petsc/src/tao/bound/utils/isutil.c /petsc/src/tao/complementarity/impls/asls/asfls.c /petsc/src/tao/complementarity/impls/asls/asils.c /petsc/src/tao/complementarity/impls/asls/makefile /petsc/src/tao/complementarity/impls/ssls/makefile /petsc/src/tao/complementarity/impls/ssls/ssfls.c /petsc/src/tao/complementarity/impls/ssls/ssils.c /petsc/src/tao/constrained/impls/ipm/ipm.c /petsc/src/tao/constrained/impls/ipm/makefile /petsc/src/tao/interface/makefile /petsc/src/tao/interface/taosolver.c /petsc/src/tao/leastsquares/examples/tutorials/output/chwirut1_1.out /petsc/src/tao/leastsquares/impls/pounders/makefile /petsc/src/tao/leastsquares/impls/pounders/pounders.c /petsc/src/tao/pde_constrained/impls/lcl/lcl.c /petsc/src/tao/pde_constrained/impls/lcl/makefile /petsc/src/tao/unconstrained/examples/tutorials/eptorsion1.c /petsc/src/tao/unconstrained/impls/bmrm/bmrm.c /petsc/src/tao/unconstrained/impls/bmrm/makefile /petsc/src/tao/unconstrained/impls/cg/makefile /petsc/src/tao/unconstrained/impls/cg/taocg.c /petsc/src/tao/unconstrained/impls/lmvm/lmvm.c /petsc/src/tao/unconstrained/impls/lmvm/makefile /petsc/src/tao/unconstrained/impls/neldermead/makefile /petsc/src/tao/unconstrained/impls/neldermead/neldermead.c /petsc/src/tao/unconstrained/impls/nls/makefile /petsc/src/tao/unconstrained/impls/nls/nls.c /petsc/src/tao/unconstrained/impls/ntl/makefile /petsc/src/tao/unconstrained/impls/ntl/ntl.c /petsc/src/tao/unconstrained/impls/ntr/makefile /petsc/src/tao/unconstrained/impls/ntr/ntr.c /petsc/src/tao/unconstrained/impls/owlqn/makefile /petsc/src/tao/unconstrained/impls/owlqn/owlqn.c /petsc/src/ts/utils/dmplexts.c /petsc/src/vec/is/utils/f90-custom/zvsectionisf.c /petsc/src/vec/is/utils/vsectionis.c /petsc/src/vec/vec/examples/tests/ex45.c /petsc/src/vec/vec/examples/tests/makefile /petsc/src/vec/vec/examples/tests/output/ex45_1.out /petsc/src/vec/vec/impls/mpi/pbvec.c /petsc/src/vec/vec/impls/seq/bvec2.c /petsc/src/vec/vec/utils/vinv.c
260b6d3f	06-Jun-2014	Matthew G. Knepley <knepley@gmail.com>	DMPlex: Added quads to cell refiner transform support plexrefine.c
f73df481	06-Jun-2014	Matthew G. Knepley <knepley@gmail.com>	DMPlex ex3: Updated to Problem interface /petsc/include/finclude/ftn-custom/petscis.h90 /petsc/include/finclude/ftn-custom/petscishide.h90 /petsc/include/petscdmda.h /petsc/src/dm/impls/da/dalocal.c examples/tests/ex3.c /petsc/src/ts/utils/dmplexts.c /petsc/src/vec/is/utils/f90-custom/zvsectionisf.c /petsc/src/vec/is/utils/vsectionis.c
08f11eef	05-Jun-2014	Matthew G. Knepley <knepley@gmail.com>	DMPlex: Use checking residual evaluation if dmCh is attached /petsc/src/dm/dt/interface/dtfe.c plexfem.c /petsc/src/snes/examples/tutorials/ex12.c
dfd65c77	05-Jun-2014	Matthew G. Knepley <knepley@gmail.com>	Merge branch 'knepley/feature-problem-class' into knepley/fix-fe-gpu * knepley/feature-problem-class: (34 commits) PetscSection: Fixes for Fortran stubs DMPlex+TS+Doc: Function docs PetscSecti Merge branch 'knepley/feature-problem-class' into knepley/fix-fe-gpu * knepley/feature-problem-class: (34 commits) PetscSection: Fixes for Fortran stubs DMPlex+TS+Doc: Function docs PetscSection: Fortran bindings DMPlex+HDF5: Had revered handedness of transformed periodic coordinates DMPlex+HDF5: Preserve aspect ratio with remapping of periodic coordinates DMPlex: Added missing declarations Sys+DMDT: Added PetscValidFunction() DMPlex: Fix for DMPlexProjectField() DMPlex+HDF5: Selectively output fields for viz - Fields with NULL name are ignored PetscSection: Allow NULL names DMPlex: Fixes for DMPlexProjectField() PetscProblem: Added scalar integral (objective function) - Added PetscProblemGet/SetObjective() - Used in PetscFEIntegrate() - Reworked PetscProblemEnlarge_Static() DM+DT: Adding Fortran bindings PetscViewer: Added HDF_VIZ format to names PetscFE+OpenCL: Make more respectable elasticity PetscFE+OpenCL: Add flag for printing kernel DMPlex: Fixes to DMPlexProjectField() PetscFE: Fix work arrays PetscFE+OpenCL: Fix interface updates DMDT: Fix complex problems ... show more ... /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/boost.py /petsc/config/BuildSystem/config/packages/cusp.py /petsc/config/BuildSystem/config/packages/f2cblaslapack.py /petsc/config/BuildSystem/config/packages/fblaslapack.py /petsc/config/BuildSystem/config/packages/fiat.py /petsc/config/BuildSystem/config/packages/hdf5.py /petsc/config/BuildSystem/config/packages/make.py /petsc/config/BuildSystem/config/packages/scientificpython.py /petsc/config/BuildSystem/config/packages/thrust.py /petsc/config/PETSc/packages/Chaco.py /petsc/config/PETSc/packages/Generator.py /petsc/config/PETSc/packages/MUMPS.py /petsc/config/PETSc/packages/SuperLU.py /petsc/config/PETSc/packages/SuperLU_DIST.py /petsc/config/PETSc/packages/X.py /petsc/config/PETSc/packages/c2html.py /petsc/config/PETSc/packages/clique.py /petsc/config/PETSc/packages/cmake.py /petsc/config/PETSc/packages/cuda.py /petsc/config/PETSc/packages/elemental.py /petsc/config/PETSc/packages/glut.py /petsc/config/PETSc/packages/hwloc.py /petsc/config/PETSc/packages/hypre.py /petsc/config/PETSc/packages/metis.py /petsc/config/PETSc/packages/ml.py /petsc/config/PETSc/packages/opencl.py /petsc/config/PETSc/packages/opengl.py /petsc/config/PETSc/packages/openmp.py /petsc/config/PETSc/packages/parmetis.py /petsc/config/PETSc/packages/pcbddc.py /petsc/config/PETSc/packages/pthread.py /petsc/config/PETSc/packages/scalapack.py /petsc/config/PETSc/packages/sowing.py /petsc/config/PETSc/packages/ssl.py /petsc/config/PETSc/packages/valgrind.py /petsc/config/PETSc/packages/viennacl.py /petsc/include/finclude/ftn-custom/petscis.h90 /petsc/include/finclude/ftn-custom/petscishide.h90 /petsc/include/finclude/petscdmdef.h /petsc/include/petsc-private/dmimpl.h /petsc/include/petsc-private/petscfeimpl.h /petsc/include/petsc-private/petscimpl.h /petsc/include/petsc-private/petscproblemimpl.h /petsc/include/petsc-private/vecimpl.h /petsc/include/petscdm.h /petsc/include/petscdmplex.h /petsc/include/petscfe.h /petsc/include/petscpc.h /petsc/include/petscproblem.h /petsc/include/petscproblemtypes.h /petsc/include/petsctao.h /petsc/include/petscvec.h /petsc/src/benchmarks/streams/BasicVersion.c /petsc/src/benchmarks/streams/MPIVersion.c /petsc/src/benchmarks/streams/PthreadVersion.c /petsc/src/benchmarks/streams/SSEVersion.c /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/dt/interface/dtfv.c /petsc/src/dm/dt/interface/dtproblem.c /petsc/src/dm/dt/interface/makefile /petsc/src/dm/impls/composite/pack.c examples/tutorials/ex3f90.F ftn-custom/makefile ftn-custom/zplexexodusii.c ftn-custom/zplexsubmesh.c plex.c plexfem.c plexhdf5.c /petsc/src/dm/interface/dlregisdmdm.c /petsc/src/dm/interface/dm.c /petsc/src/dm/interface/dmi.c /petsc/src/dm/interface/dmregall.c /petsc/src/docs/tex/manual/part2.tex /petsc/src/docs/website/documentation/installation.html /petsc/src/docs/website/documentation/taosolvertable.html /petsc/src/ksp/ksp/examples/tutorials/ex52.c /petsc/src/ksp/ksp/examples/tutorials/makefile /petsc/src/ksp/ksp/utils/schurm.c /petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c /petsc/src/mat/impls/aij/mpi/mumps/mumps.c /petsc/src/snes/examples/tutorials/ex12.c /petsc/src/snes/examples/tutorials/ex62.c /petsc/src/sys/classes/viewer/interface/viewa.c /petsc/src/tao/bound/impls/blmvm/blmvm.c /petsc/src/tao/bound/impls/blmvm/makefile /petsc/src/tao/bound/impls/bqpip/bqpip.c /petsc/src/tao/bound/impls/bqpip/makefile /petsc/src/tao/bound/impls/gpcg/gpcg.c /petsc/src/tao/bound/impls/gpcg/makefile /petsc/src/tao/bound/impls/tron/makefile /petsc/src/tao/bound/impls/tron/tron.c /petsc/src/tao/bound/utils/isutil.c /petsc/src/tao/complementarity/impls/asls/asfls.c /petsc/src/tao/complementarity/impls/asls/asils.c /petsc/src/tao/complementarity/impls/asls/makefile /petsc/src/tao/complementarity/impls/ssls/makefile /petsc/src/tao/complementarity/impls/ssls/ssfls.c /petsc/src/tao/complementarity/impls/ssls/ssils.c /petsc/src/tao/constrained/impls/ipm/ipm.c /petsc/src/tao/constrained/impls/ipm/makefile /petsc/src/tao/interface/makefile /petsc/src/tao/interface/taosolver.c /petsc/src/tao/leastsquares/examples/tutorials/output/chwirut1_1.out /petsc/src/tao/leastsquares/impls/pounders/makefile /petsc/src/tao/leastsquares/impls/pounders/pounders.c /petsc/src/tao/pde_constrained/impls/lcl/lcl.c /petsc/src/tao/pde_constrained/impls/lcl/makefile /petsc/src/tao/unconstrained/examples/tutorials/eptorsion1.c /petsc/src/tao/unconstrained/impls/bmrm/bmrm.c /petsc/src/tao/unconstrained/impls/bmrm/makefile /petsc/src/tao/unconstrained/impls/cg/makefile /petsc/src/tao/unconstrained/impls/cg/taocg.c /petsc/src/tao/unconstrained/impls/lmvm/lmvm.c /petsc/src/tao/unconstrained/impls/lmvm/makefile /petsc/src/tao/unconstrained/impls/neldermead/makefile /petsc/src/tao/unconstrained/impls/neldermead/neldermead.c /petsc/src/tao/unconstrained/impls/nls/makefile /petsc/src/tao/unconstrained/impls/nls/nls.c /petsc/src/tao/unconstrained/impls/ntl/makefile /petsc/src/tao/unconstrained/impls/ntl/ntl.c /petsc/src/tao/unconstrained/impls/ntr/makefile /petsc/src/tao/unconstrained/impls/ntr/ntr.c /petsc/src/tao/unconstrained/impls/owlqn/makefile /petsc/src/tao/unconstrained/impls/owlqn/owlqn.c /petsc/src/ts/utils/dmplexts.c /petsc/src/vec/is/utils/f90-custom/zvsectionisf.c /petsc/src/vec/is/utils/vsectionis.c /petsc/src/vec/vec/examples/tests/ex45.c /petsc/src/vec/vec/examples/tests/makefile /petsc/src/vec/vec/examples/tests/output/ex45_1.out /petsc/src/vec/vec/impls/mpi/pbvec.c /petsc/src/vec/vec/impls/seq/bvec2.c /petsc/src/vec/vec/utils/vinv.c
13010a1f	04-Jun-2014	Matthew G. Knepley <knepley@gmail.com>	DMPlex+HDF5: Had revered handedness of transformed periodic coordinates plexhdf5.c
284bcd50	04-Jun-2014	Matthew G. Knepley <knepley@gmail.com>	DMPlex+HDF5: Preserve aspect ratio with remapping of periodic coordinates /petsc/include/petsc-private/petscimpl.h /petsc/include/petscdmplex.h /petsc/src/dm/dt/interface/dtproblem.c plexhdf5.c
326413af	03-Jun-2014	Matthew G. Knepley <knepley@gmail.com>	DMPlex: Fix for DMPlexProjectField() plexfem.c
a0c90c49	03-Jun-2014	Matthew G. Knepley <knepley@gmail.com>	DMPlex+HDF5: Selectively output fields for viz - Fields with NULL name are ignored plexhdf5.c /petsc/src/vec/is/utils/vsectionis.c
3bc3b0a0	03-Jun-2014	Matthew G. Knepley <knepley@gmail.com>	DMPlex: Fixes for DMPlexProjectField() /petsc/include/petsc-private/petscproblemimpl.h /petsc/include/petscproblem.h /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/dt/interface/dtproblem.c plexfem.c
c1929be8	03-Jun-2014	Matthew G. Knepley <knepley@gmail.com>	DM+DT: Adding Fortran bindings /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/dt/interface/dtfv.c ftn-custom/makefile ftn-custom/zplexexodusii.c /petsc/src/dm/interface/dm.c /petsc/src/sys/classes/viewer/interface/viewa.c
0157cb02	02-Jun-2014	Barry Smith <bsmith@mcs.anl.gov>	Merge branch 'jed/dmda-memusage' /petsc/bin/maint/update-docs.py /petsc/include/finclude/ftn-custom/petscdmda.h90 /petsc/include/petscdmda.h /petsc/include/petscis.h /petsc/src/dm/examples/tests/ex4.c /petsc/src/dm/examples/tests/ex6.c /petsc/src/dm/examples/tests/makefile /petsc/src/dm/impls/da/da3.c /petsc/src/dm/impls/da/daindex.c /petsc/src/dm/impls/da/dainterp.c /petsc/src/dm/impls/da/f90-custom/makefile /petsc/src/dm/impls/da/ftn-custom/makefile /petsc/src/dm/impls/da/hypre/mhyp.c plexdistribute.c plexlabel.c /petsc/src/docs/tex/manual/part2.tex /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/docs/website/documentation/faq.html /petsc/src/ksp/ksp/examples/tests/ex14.c /petsc/src/ksp/ksp/examples/tests/ex19.c /petsc/src/ksp/ksp/examples/tests/ex26.c /petsc/src/ksp/ksp/examples/tests/ex29.c /petsc/src/ksp/ksp/examples/tests/makefile /petsc/src/ksp/ksp/examples/tests/output/ex14_1.out /petsc/src/ksp/ksp/examples/tutorials/ex14f.F /petsc/src/ksp/ksp/examples/tutorials/ex43.c /petsc/src/ksp/ksp/examples/tutorials/ex49.c /petsc/src/ksp/ksp/interface/iterativ.c /petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/ksp/pc/impls/bddc/bddc.c /petsc/src/mat/impls/is/matis.c /petsc/src/mat/impls/localref/mlocalref.c /petsc/src/snes/examples/tests/ex5.c /petsc/src/snes/examples/tests/makefile /petsc/src/snes/examples/tutorials/ex5f.F /petsc/src/snes/examples/tutorials/ex5f90.F /petsc/src/snes/examples/tutorials/ex5f90t.F /petsc/src/sys/objects/pinit.c /petsc/src/tao/bound/examples/tutorials/plate2f.F /petsc/src/vec/is/is/examples/tutorials/ex4.c /petsc/src/vec/is/is/examples/tutorials/ex5.c /petsc/src/vec/is/is/examples/tutorials/makefile /petsc/src/vec/is/is/examples/tutorials/output/ex4_1.out /petsc/src/vec/is/is/examples/tutorials/output/ex5_1.out /petsc/src/vec/is/is/interface/ftn-custom/zindexf.c /petsc/src/vec/is/utils/f90-custom/makefile /petsc/src/vec/is/utils/f90-custom/zisltogf.c /petsc/src/vec/is/utils/isltog.c /petsc/src/vec/is/utils/makefile /petsc/src/vec/is/utils/pmap.c
3113607c	02-Jun-2014	Matthew G. Knepley <knepley@gmail.com>	DMPlex: Fixes to DMPlexProjectField() /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/dt/interface/dtproblem.c plexfem.c
9d90f715	30-May-2014	Barry Smith <bsmith@mcs.anl.gov>	added ISGlobalToLocalMappingApplyBlock() and fixed the ISGlobalToLocalMappingApply() to work for points added simple test for these /petsc/include/finclude/ftn-custom/petscdmda.h90 /petsc/include/petscdmda.h /petsc/include/petscis.h /petsc/src/dm/examples/tests/ex4.c /petsc/src/dm/examples/tests/ex6.c /petsc/src/dm/examples/tests/makefile /petsc/src/dm/impls/da/da3.c /petsc/src/dm/impls/da/daindex.c /petsc/src/dm/impls/da/dainterp.c /petsc/src/dm/impls/da/f90-custom/makefile /petsc/src/dm/impls/da/ftn-custom/makefile /petsc/src/dm/impls/da/hypre/mhyp.c plexdistribute.c plexlabel.c /petsc/src/docs/tex/manual/part2.tex /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/ksp/examples/tests/ex14.c /petsc/src/ksp/ksp/examples/tests/ex19.c /petsc/src/ksp/ksp/examples/tests/ex26.c /petsc/src/ksp/ksp/examples/tests/ex29.c /petsc/src/ksp/ksp/examples/tests/makefile /petsc/src/ksp/ksp/examples/tests/output/ex14_1.out /petsc/src/ksp/ksp/examples/tutorials/ex14f.F /petsc/src/ksp/ksp/examples/tutorials/ex43.c /petsc/src/ksp/ksp/examples/tutorials/ex49.c /petsc/src/mat/impls/localref/mlocalref.c /petsc/src/snes/examples/tests/ex5.c /petsc/src/snes/examples/tests/makefile /petsc/src/snes/examples/tutorials/ex5f.F /petsc/src/snes/examples/tutorials/ex5f90.F /petsc/src/snes/examples/tutorials/ex5f90t.F /petsc/src/tao/bound/examples/tutorials/plate2f.F /petsc/src/vec/is/is/examples/tutorials/ex4.c /petsc/src/vec/is/is/examples/tutorials/ex5.c /petsc/src/vec/is/is/examples/tutorials/makefile /petsc/src/vec/is/is/examples/tutorials/output/ex4_1.out /petsc/src/vec/is/is/examples/tutorials/output/ex5_1.out /petsc/src/vec/is/is/interface/ftn-custom/zindexf.c /petsc/src/vec/is/utils/f90-custom/makefile /petsc/src/vec/is/utils/f90-custom/zisltogf.c /petsc/src/vec/is/utils/isltog.c /petsc/src/vec/is/utils/makefile /petsc/src/vec/is/utils/pmap.c
ff6b8e28	30-May-2014	Matthew G. Knepley <knepley@gmail.com>	DMPlex: Added small PetscFV part into tutorial, and Fortran binding /petsc/include/petsc-private/petscfeimpl.h /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/dt/interface/dtfv.c examples/tutorials/ex3f90.F
3b209e49	29-May-2014	Matthew G. Knepley <knepley@gmail.com>	DMPlex: Added Fortran binding for DMPlexConstructGhostCells() /petsc/include/finclude/petscdmdef.h ftn-custom/zplexsubmesh.c
8c7f9fc6	28-May-2014	Matthew G. Knepley <knepley@gmail.com>	DMPlex: Fixed DMLocalizeCoordinates() /petsc/src/dm/impls/composite/pack.c plex.c
adbe6fbb	28-May-2014	Matthew G. Knepley <knepley@gmail.com>	DMPlex: Added DMPlexTSComputeIFunction() - Fixed docs for the SNES version /petsc/include/petscdmplex.h plexfem.c /petsc/src/snes/examples/tutorials/ex12.c /petsc/src/snes/examples/tutorials/ex62.c
0f2d7e86	28-May-2014	Matthew G. Knepley <knepley@gmail.com>	DMPlex: Assembly routines now use embedded PetscProblem rather than taking an array of PetscFE - Changed were verified using SNES ex12 and ex62 /petsc/include/petsc-private/dmimpl.h /petsc/include/petsc-private/petscfeimpl.h /petsc/include/petsc-private/petscproblemimpl.h /petsc/include/petscdm.h /petsc/include/petscdmplex.h /petsc/include/petscfe.h /petsc/include/petscproblem.h /petsc/include/petscproblemtypes.h /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/dt/interface/dtproblem.c /petsc/src/dm/dt/interface/makefile /petsc/src/dm/impls/composite/pack.c plexfem.c /petsc/src/dm/interface/dlregisdmdm.c /petsc/src/dm/interface/dm.c /petsc/src/dm/interface/dmi.c /petsc/src/dm/interface/dmregall.c
fed2a9ca	28-May-2014	Matthew G. Knepley <knepley@gmail.com>	Merge branch 'knepley/fix-fe-multifield' * knepley/fix-fe-multifield: DMPlex ex4: Changed numbering for hybrid edges DMPlex ex3: Interpolation now working for Discontinuous Lagrange PetscDualS Merge branch 'knepley/fix-fe-multifield' * knepley/fix-fe-multifield: DMPlex ex4: Changed numbering for hybrid edges DMPlex ex3: Interpolation now working for Discontinuous Lagrange PetscDualSpace: Fixed index error in Lagrange creation PetscFE: Fixed PetscFERefine() - The refined dual space was not properly duplicated - Added PetscDualSpaceDuplicate() DMPlex ex1: Updated test output DM: Added check for erroneous input when creating default SF PetscFE: Fixed allocation bug PetscBag: Added PetscBagGetNames() show more ... /petsc/config/builder.py /petsc/include/petsc-private/petscfeimpl.h /petsc/include/petscbag.h /petsc/include/petscfe.h /petsc/src/dm/dt/interface/dtfe.c examples/tests/output/ex1_6.out examples/tests/output/ex1_8.out examples/tests/output/ex3_25.out examples/tests/output/ex3_26.out examples/tests/output/ex3_27.out examples/tests/output/ex3_28.out examples/tests/output/ex3_29.out examples/tests/output/ex3_30.out examples/tests/output/ex4_17.out /petsc/src/dm/interface/dm.c /petsc/src/sys/classes/bag/bag.c
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