History log of /petsc/src/dm/impls/plex/ (Results 5101 – 5125 of 5874)
Revision Date Author Comments
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a063dac303-Mar-2014 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Interpolation construction needs DM context


plex.c
286d861303-Mar-2014 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Allow DMCreateDefaultSection_Plex() to handle multiple fields


plex.c
b0ecff4503-Mar-2014 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Diagnostic printing of matrices now allows rectangular input


plex.c
923591df03-Mar-2014 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Namespace geometry functions and move static inlines to the header
- small matrix determinant and inversion


/petsc/include/petsc-private/dmpleximpl.h
plexgeometry.c
bed052ea03-Mar-2014 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Added CellRefinerGet/RestoreAffineTransforms_Internal()
- This gives the mapping from a given cell to each subcell


/petsc/include/petsc-private/dmpleximpl.h
plexrefine.c
da1dd7e401-Mar-2014 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Fixed submesh boundary in 3D
- Correct support for unsplit edges
- Correct support for hybrid faces from unsplit edges
- Added checks


plexsubmesh.c
42e66dfa01-Mar-2014 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Now DMPlexCheclSymmetry() also checks multiple cone/support entries


plex.c
39254ff628-Feb-2014 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Fix unsplit vertex support in submeshes
- Assumed only a single split edge, which is true in 2D


plexsubmesh.c
8771c1d328-Feb-2014 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Fixing marking of unsplit vertices
- Check for presence in label was wrong (has to be exactly -1)
- Check for incidence was wrong (was also getting unsplit marker)


/petsc/bin/matlab/classes/matlabheader.h
/petsc/conf/rules
/petsc/config/BuildSystem/config/packages/MPI.py
/petsc/config/BuildSystem/config/packages/netcdf.py
/petsc/include/finclude/petscmat.h
/petsc/include/finclude/petscsysdef.h
/petsc/include/petsc-private/kspimpl.h
/petsc/include/petsc-private/matimpl.h
/petsc/include/petsc-private/pcimpl.h
/petsc/include/petsc-private/snesimpl.h
/petsc/include/petsc-private/taodmimpl.h
/petsc/include/petsc-private/taoimpl.h
/petsc/include/petsc-private/tsimpl.h
/petsc/include/petscksp.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/include/petscsnes.h
/petsc/include/petscsys.h
/petsc/include/petsctao.h
/petsc/include/petscts.h
/petsc/makefile
/petsc/src/contrib/fun3d/comp/flow.c
/petsc/src/contrib/fun3d/incomp/flow.c
/petsc/src/contrib/style/include-graph.sh
plexsubmesh.c
/petsc/src/docs/doxygen/manual/user/introduction/getting-started.h
/petsc/src/docs/tao_tex/manual/part1.tex
/petsc/src/docs/tao_tex/manual/part2.tex
/petsc/src/docs/tao_tex/manual/rosenbrock1.c
/petsc/src/docs/tex/manual/part1.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/documentation/installation.html
/petsc/src/docs/website/features/details.html
/petsc/src/docs/website/features/diagram.html
/petsc/src/docs/website/features/gpus.html
/petsc/src/docs/website/index.html
/petsc/src/docs/website/miscellaneous/external.html
/petsc/src/ksp/ksp/examples/tests/ex1.c
/petsc/src/ksp/ksp/examples/tests/ex10.c
/petsc/src/ksp/ksp/examples/tests/ex11.c
/petsc/src/ksp/ksp/examples/tests/ex12f.F
/petsc/src/ksp/ksp/examples/tests/ex14.c
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/petsc/src/ksp/ksp/examples/tests/ex16f.F
/petsc/src/ksp/ksp/examples/tests/ex17.c
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/petsc/src/ksp/ksp/examples/tests/ex2.c
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/petsc/src/ksp/ksp/examples/tests/ex25.c
/petsc/src/ksp/ksp/examples/tests/ex26.c
/petsc/src/ksp/ksp/examples/tests/ex27.c
/petsc/src/ksp/ksp/examples/tests/ex28.c
/petsc/src/ksp/ksp/examples/tests/ex29.c
/petsc/src/ksp/ksp/examples/tests/ex3.c
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/petsc/src/ksp/ksp/examples/tests/ex4.c
/petsc/src/ksp/ksp/examples/tests/ex40.c
/petsc/src/ksp/ksp/examples/tests/ex42.c
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/petsc/src/ksp/ksp/examples/tests/ex6.c
/petsc/src/ksp/ksp/examples/tests/ex7.c
/petsc/src/ksp/ksp/examples/tutorials/ex1.c
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/petsc/src/ksp/ksp/examples/tutorials/ex32.c
/petsc/src/ksp/ksp/examples/tutorials/ex34.c
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/petsc/src/ksp/ksp/examples/tutorials/ex7.c
/petsc/src/ksp/ksp/examples/tutorials/ex8.c
/petsc/src/ksp/ksp/examples/tutorials/ex8g.c
/petsc/src/ksp/ksp/examples/tutorials/ex9.c
/petsc/src/ksp/ksp/impls/bicg/bicg.c
/petsc/src/ksp/ksp/impls/cg/cg.c
/petsc/src/ksp/ksp/impls/cg/cgne/cgne.c
/petsc/src/ksp/ksp/impls/cg/gltr/gltr.c
/petsc/src/ksp/ksp/impls/cg/groppcg/groppcg.c
/petsc/src/ksp/ksp/impls/cg/nash/nash.c
/petsc/src/ksp/ksp/impls/cg/pipecg/pipecg.c
/petsc/src/ksp/ksp/impls/cg/stcg/stcg.c
/petsc/src/ksp/ksp/impls/cheby/cheby.c
/petsc/src/ksp/ksp/impls/cr/cr.c
/petsc/src/ksp/ksp/impls/cr/pipecr/pipecr.c
/petsc/src/ksp/ksp/impls/gcr/gcr.c
/petsc/src/ksp/ksp/impls/gmres/fgmres/fgmres.c
/petsc/src/ksp/ksp/impls/ibcgs/ibcgs.c
/petsc/src/ksp/ksp/impls/lcd/lcd.c
/petsc/src/ksp/ksp/impls/lsqr/lsqr.c
/petsc/src/ksp/ksp/impls/minres/minres.c
/petsc/src/ksp/ksp/impls/qcg/qcg.c
/petsc/src/ksp/ksp/impls/rich/rich.c
/petsc/src/ksp/ksp/impls/symmlq/symmlq.c
/petsc/src/ksp/ksp/interface/dmksp.c
/petsc/src/ksp/ksp/interface/eige.c
/petsc/src/ksp/ksp/interface/ftn-custom/zdmkspf.c
/petsc/src/ksp/ksp/interface/iguess.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/ksp/ksp/interface/iterativ.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/interface/itres.c
/petsc/src/ksp/ksp/utils/schurm.c
/petsc/src/ksp/pc/examples/tests/ex1.c
/petsc/src/ksp/pc/examples/tests/ex2.c
/petsc/src/ksp/pc/examples/tests/ex3.c
/petsc/src/ksp/pc/examples/tests/ex4.c
/petsc/src/ksp/pc/examples/tests/ex5.c
/petsc/src/ksp/pc/examples/tests/ex7.c
/petsc/src/ksp/pc/examples/tests/ex8f.F
/petsc/src/ksp/pc/examples/tutorials/ex1.c
/petsc/src/ksp/pc/examples/tutorials/ex2.c
/petsc/src/ksp/pc/examples/tutorials/ex3.c
/petsc/src/ksp/pc/impls/asm/asm.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddcnullspace.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bjacobi/bjacobi.c
/petsc/src/ksp/pc/impls/composite/composite.c
/petsc/src/ksp/pc/impls/factor/ilu/ilu.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gasm/gasm.c
/petsc/src/ksp/pc/impls/is/nn/nn.c
/petsc/src/ksp/pc/impls/is/pcis.c
/petsc/src/ksp/pc/impls/ksp/pcksp.c
/petsc/src/ksp/pc/impls/lsc/lsc.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/ksp/pc/impls/redistribute/redistribute.c
/petsc/src/ksp/pc/impls/redundant/redundant.c
/petsc/src/ksp/pc/impls/wb/wb.c
/petsc/src/ksp/pc/interface/ftn-custom/zpreconf.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/impls/aij/mpi/fdmpiaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/mpi/mpibaij.h
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/baij/seq/baij.h
/petsc/src/mat/impls/blockmat/seq/blockmat.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/matfd/fdmatrix.c
/petsc/src/snes/examples/tests/ex1.c
/petsc/src/snes/examples/tests/ex11.c
/petsc/src/snes/examples/tests/ex12f.F
/petsc/src/snes/examples/tests/ex15.c
/petsc/src/snes/examples/tests/ex16.c
/petsc/src/snes/examples/tests/ex17.c
/petsc/src/snes/examples/tests/ex1f.F
/petsc/src/snes/examples/tests/ex5.c
/petsc/src/snes/examples/tests/ex68.c
/petsc/src/snes/examples/tests/ex7.c
/petsc/src/snes/examples/tests/ex8.c
/petsc/src/snes/examples/tests/makefile
/petsc/src/snes/examples/tests/output/ex7_1.out
/petsc/src/snes/examples/tutorials/cahn-hilliard-schemes/ex1.c
/petsc/src/snes/examples/tutorials/ex1.c
/petsc/src/snes/examples/tutorials/ex10d/ex10.c
/petsc/src/snes/examples/tutorials/ex12.c
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/petsc/src/snes/examples/tutorials/ex633d_db.c
/petsc/src/snes/examples/tutorials/ex64.c
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/petsc/src/snes/examples/tutorials/ex9.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/impls/ksponly/ksponly.c
/petsc/src/snes/impls/ls/ls.c
/petsc/src/snes/impls/ms/ms.c
/petsc/src/snes/impls/multiblock/multiblock.c
/petsc/src/snes/impls/nasm/nasm.c
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/impls/test/snestest.c
/petsc/src/snes/impls/tr/tr.c
/petsc/src/snes/impls/vi/rs/virs.c
/petsc/src/snes/impls/vi/rsaug/virsaug.c
/petsc/src/snes/impls/vi/ss/viss.c
/petsc/src/snes/interface/ftn-custom/zsnesf.c
/petsc/src/snes/interface/noise/snesnoise.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesj.c
/petsc/src/snes/interface/snesj2.c
/petsc/src/snes/interface/snesut.c
/petsc/src/snes/mf/snesmfj.c
/petsc/src/snes/utils/dmdasnes.c
/petsc/src/snes/utils/dmlocalsnes.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/snes/utils/dmsnes.c
/petsc/src/snes/utils/ftn-custom/zdmdasnesf.c
/petsc/src/snes/utils/ftn-custom/zdmlocalsnesf.c
/petsc/src/snes/utils/ftn-custom/zdmsnesf.c
/petsc/src/tao/bound/examples/tutorials/jbearing2.c
/petsc/src/tao/bound/examples/tutorials/plate2.c
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/petsc/src/tao/bound/impls/bqpip/bqpip.c
/petsc/src/tao/bound/impls/gpcg/gpcg.c
/petsc/src/tao/bound/impls/tron/tron.c
/petsc/src/tao/bound/impls/tron/tron.h
/petsc/src/tao/complementarity/examples/tutorials/blackscholes.c
/petsc/src/tao/complementarity/examples/tutorials/minsurf1.c
/petsc/src/tao/complementarity/impls/asls/asfls.c
/petsc/src/tao/complementarity/impls/asls/asils.c
/petsc/src/tao/complementarity/impls/ssls/ssfls.c
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/petsc/src/tao/complementarity/impls/ssls/ssls.h
/petsc/src/tao/constrained/examples/tutorials/makefile
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/petsc/src/tao/constrained/impls/ipm/ipm.c
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/petsc/src/tao/interface/fdiff.c
/petsc/src/tao/interface/fdtest.c
/petsc/src/tao/interface/ftn-custom/ztaosolverf.c
/petsc/src/tao/interface/taosolver_hj.c
/petsc/src/tao/leastsquares/examples/tutorials/chwirut1.c
/petsc/src/tao/leastsquares/impls/pounders/pounders.c
/petsc/src/tao/pde_constrained/examples/tutorials/elliptic.c
/petsc/src/tao/pde_constrained/examples/tutorials/hyperbolic.c
/petsc/src/tao/pde_constrained/examples/tutorials/parabolic.c
/petsc/src/tao/pde_constrained/impls/lcl/lcl.c
/petsc/src/tao/pde_constrained/impls/lcl/lcl.h
/petsc/src/tao/unconstrained/examples/tutorials/eptorsion1.c
/petsc/src/tao/unconstrained/examples/tutorials/eptorsion2.c
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/petsc/src/tao/unconstrained/examples/tutorials/minsurf1.c
/petsc/src/tao/unconstrained/examples/tutorials/minsurf2.c
/petsc/src/tao/unconstrained/examples/tutorials/rosenbrock1.c
/petsc/src/tao/unconstrained/examples/tutorials/rosenbrock1f.F
/petsc/src/tao/unconstrained/impls/nls/nls.c
/petsc/src/tao/unconstrained/impls/ntl/ntl.c
/petsc/src/tao/unconstrained/impls/ntr/ntr.c
/petsc/src/ts/examples/tests/ex2.c
/petsc/src/ts/examples/tests/ex25.c
/petsc/src/ts/examples/tests/ex3.c
/petsc/src/ts/examples/tests/ex4.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex1.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex10.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex2.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex3.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex5.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex7.c
/petsc/src/ts/examples/tutorials/eimex/allen_cahn.c
/petsc/src/ts/examples/tutorials/eimex/ct_vdp_imex.c
/petsc/src/ts/examples/tutorials/ex1.c
/petsc/src/ts/examples/tutorials/ex10.c
/petsc/src/ts/examples/tutorials/ex13.c
/petsc/src/ts/examples/tutorials/ex14.c
/petsc/src/ts/examples/tutorials/ex15.c
/petsc/src/ts/examples/tutorials/ex16.c
/petsc/src/ts/examples/tutorials/ex17.c
/petsc/src/ts/examples/tutorials/ex19.c
/petsc/src/ts/examples/tutorials/ex1f.F
/petsc/src/ts/examples/tutorials/ex2.c
/petsc/src/ts/examples/tutorials/ex20.c
/petsc/src/ts/examples/tutorials/ex21.c
/petsc/src/ts/examples/tutorials/ex22.c
/petsc/src/ts/examples/tutorials/ex22f.F
/petsc/src/ts/examples/tutorials/ex22f_mf.F90
/petsc/src/ts/examples/tutorials/ex23.c
/petsc/src/ts/examples/tutorials/ex24.c
/petsc/src/ts/examples/tutorials/ex25.c
/petsc/src/ts/examples/tutorials/ex2f.F
/petsc/src/ts/examples/tutorials/ex3.c
/petsc/src/ts/examples/tutorials/ex30.cxx
/petsc/src/ts/examples/tutorials/ex31.c
/petsc/src/ts/examples/tutorials/ex34.c
/petsc/src/ts/examples/tutorials/ex4.c
/petsc/src/ts/examples/tutorials/ex5.c
/petsc/src/ts/examples/tutorials/ex6.c
/petsc/src/ts/examples/tutorials/ex8.c
/petsc/src/ts/examples/tutorials/ex9.c
/petsc/src/ts/examples/tutorials/phasefield/biharmonic.c
/petsc/src/ts/examples/tutorials/power_grid/ex1.c
/petsc/src/ts/examples/tutorials/power_grid/ex2.c
/petsc/src/ts/examples/tutorials/power_grid/ex6.c
/petsc/src/ts/examples/tutorials/power_grid/ex7.c
/petsc/src/ts/examples/tutorials/power_grid/ex8.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9bus.c
/petsc/src/ts/impls/arkimex/arkimex.c
/petsc/src/ts/impls/eimex/eimex.c
/petsc/src/ts/impls/implicit/alpha/alpha.c
/petsc/src/ts/impls/implicit/gl/gl.c
/petsc/src/ts/impls/implicit/sundials/sundials.c
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/impls/pseudo/posindep.c
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/ts/interface/ftn-custom/ztsf.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tseig.c
/petsc/src/ts/utils/dmdats.c
/petsc/tutorials/python/ex1.c
/petsc/tutorials/python/ex1f.F
59dfc83726-Feb-2014 Stefan Lemvig Glimberg <Stefan.Glimberg@lr.org>

DMPlex: Fixes for CGNS
- Fixed loop bounds since CGNS uses closed intervals
- Bug with mixed cell types
- Typo with coordinates


/petsc/bin/maint/generatefortranstubs.py
/petsc/conf/gmakegen.py
/petsc/conf/rules
/petsc/conf/test
/petsc/conf/variables
/petsc/config/BuildSystem/config/packages/MPI.py
/petsc/config/BuildSystem/config/packages/make.py
/petsc/config/PETSc/packages/cmake.py
/petsc/config/PETSc/packages/elemental.py
/petsc/config/PETSc/packages/viennacl.py
/petsc/config/PETSc/utilities/Regression.py
/petsc/config/cmakegen.py
/petsc/include/finclude/petsctaodef.h
/petsc/include/petsc-private/matimpl.h
/petsc/include/petsc-private/petscimpl.h
/petsc/include/petsc-private/taoimpl.h
/petsc/include/petsc-private/taolinesearchimpl.h
/petsc/include/petscdmda.h
/petsc/include/petscerror.h
/petsc/include/petscis.h
/petsc/include/petscksp.h
/petsc/include/petsclog.h
/petsc/include/petscmat.h
/petsc/include/petscmath.h
/petsc/include/petscoptions.h
/petsc/include/petscpc.h
/petsc/include/petscsnes.h
/petsc/include/petscsys.h
/petsc/include/petsctao.h
/petsc/include/petsctaolinesearch.h
/petsc/include/petscts.h
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/da/fdda.c
/petsc/src/dm/impls/moab/makefile
plexcgns.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmget.c
/petsc/src/docs/tao_tex/manual/addsolver.tex
/petsc/src/docs/tao_tex/manual/part1.tex
/petsc/src/docs/tao_tex/manual/part2.tex
/petsc/src/docs/tao_tex/manual/part3.tex
/petsc/src/docs/tao_tex/manual/rosenbrock1.c
/petsc/src/docs/tao_tex/tutorials/nersc/n02.tex
/petsc/src/docs/tao_tex/tutorials/nersc/n03.tex
/petsc/src/docs/tao_tex/tutorials/nersc/n04.tex
/petsc/src/docs/tao_tex/tutorials/nersc/taoacts08.tex
/petsc/src/docs/tao_tex/tutorials/nersc/taoacts09.tex
/petsc/src/docs/tao_tex/tutorials/nersc/taoacts10.tex
/petsc/src/docs/tao_tex/tutorials/nersc/taoacts11.tex
/petsc/src/docs/tao_tex/tutorials/nersc/taoacts12.tex
/petsc/src/docs/tex/manual/intro.tex
/petsc/src/docs/tex/manual/manual.tex
/petsc/src/docs/tex/manual/part1.tex
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/referencing.html
/petsc/src/docs/website/images/karli.jpg
/petsc/src/docs/website/miscellaneous/index.html
/petsc/src/ksp/ksp/examples/tutorials/ex10.c
/petsc/src/ksp/pc/impls/composite/composite.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/gamg/tools.c
/petsc/src/ksp/pc/impls/kaczmarz/kaczmarz.c
/petsc/src/ksp/pc/impls/kaczmarz/makefile
/petsc/src/ksp/pc/impls/makefile
/petsc/src/ksp/pc/impls/pbjacobi/pbjacobi.c
/petsc/src/ksp/pc/interface/pcregis.c
/petsc/src/mat/impls/aij/mpi/clique/makefile
/petsc/src/mat/impls/aij/mpi/mmaij.c
/petsc/src/mat/impls/aij/mpi/mpb_aij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpicusp/mpiaijcusp.cu
/petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/aij/mpi/mpiov.c
/petsc/src/mat/impls/aij/mpi/mpiptap.c
/petsc/src/mat/impls/aij/mpi/mpiviennacl/makefile
/petsc/src/mat/impls/aij/mpi/mpiviennacl/mpiaijviennacl.cxx
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aijfact.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/impls/aij/seq/matrart.c
/petsc/src/mat/impls/aij/seq/seqcusp/aijcusp.cu
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/aij/seq/seqviennacl/aijviennacl.cxx
/petsc/src/mat/impls/aij/seq/seqviennacl/makefile
/petsc/src/mat/impls/aij/seq/seqviennacl/viennaclmatimpl.h
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/elemental/makefile
/petsc/src/mat/impls/elemental/matelem.cxx
/petsc/src/mat/impls/localref/mlocalref.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/impls/shell/shellcnv.c
/petsc/src/mat/impls/submat/submat.c
/petsc/src/mat/impls/transpose/transm.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/order/spectral.c
/petsc/src/mat/utils/convert.c
/petsc/src/mat/utils/gcreate.c
/petsc/src/snes/impls/ls/ls.c
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/impls/ngmres/anderson.c
/petsc/src/snes/impls/ngmres/ngmresfunc.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/impls/richardson/snesrichardson.c
/petsc/src/snes/interface/snespc.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/sys/classes/viewer/interface/viewa.c
/petsc/src/sys/fileio/ftest.c
/petsc/src/sys/logging/plog.c
/petsc/src/sys/objects/options.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/objects/state.c
/petsc/src/tao/bound/examples/tutorials/jbearing2.c
/petsc/src/tao/bound/examples/tutorials/makefile
/petsc/src/tao/bound/examples/tutorials/output/plate2_1.out
/petsc/src/tao/bound/examples/tutorials/output/plate2_2.out
/petsc/src/tao/bound/examples/tutorials/output/plate2_3.out
/petsc/src/tao/bound/examples/tutorials/output/plate2_4.out
/petsc/src/tao/bound/examples/tutorials/output/plate2_5.out
/petsc/src/tao/bound/examples/tutorials/output/plate2_6.out
/petsc/src/tao/bound/examples/tutorials/output/plate2_7.out
/petsc/src/tao/bound/examples/tutorials/plate2.c
/petsc/src/tao/bound/examples/tutorials/plate2f.F
/petsc/src/tao/bound/impls/blmvm/blmvm.c
/petsc/src/tao/bound/impls/bqpip/bqpip.c
/petsc/src/tao/bound/impls/gpcg/gpcg.c
/petsc/src/tao/bound/impls/tron/tron.c
/petsc/src/tao/bound/utils/isutil.c
/petsc/src/tao/complementarity/examples/tutorials/blackscholes.c
/petsc/src/tao/complementarity/examples/tutorials/makefile
/petsc/src/tao/complementarity/examples/tutorials/minsurf1.c
/petsc/src/tao/complementarity/examples/tutorials/output/minsurf1_1.out
/petsc/src/tao/complementarity/examples/tutorials/output/minsurf1_2.out
/petsc/src/tao/complementarity/impls/asls/asfls.c
/petsc/src/tao/complementarity/impls/asls/asils.c
/petsc/src/tao/complementarity/impls/ssls/ssfls.c
/petsc/src/tao/complementarity/impls/ssls/ssils.c
/petsc/src/tao/complementarity/impls/ssls/ssls.c
/petsc/src/tao/constrained/examples/tutorials/maros.c
/petsc/src/tao/constrained/examples/tutorials/toy.c
/petsc/src/tao/constrained/examples/tutorials/toyf.F
/petsc/src/tao/constrained/impls/ipm/ipm.c
/petsc/src/tao/interface/fdiff.c
/petsc/src/tao/interface/fdtest.c
/petsc/src/tao/interface/taosolver.c
/petsc/src/tao/interface/taosolverregi.c
/petsc/src/tao/leastsquares/examples/tutorials/chwirut1.c
/petsc/src/tao/leastsquares/examples/tutorials/chwirut1f.F
/petsc/src/tao/leastsquares/examples/tutorials/chwirut2.c
/petsc/src/tao/leastsquares/examples/tutorials/chwirut2f.F
/petsc/src/tao/leastsquares/examples/tutorials/makefile
/petsc/src/tao/leastsquares/examples/tutorials/output/chwirut1_1.out
/petsc/src/tao/leastsquares/examples/tutorials/output/chwirut1f_1.out
/petsc/src/tao/leastsquares/impls/pounders/gqt.c
/petsc/src/tao/leastsquares/impls/pounders/pounders.c
/petsc/src/tao/leastsquares/impls/poundersb/pounders_util.c
/petsc/src/tao/leastsquares/impls/poundersb/poundersb.c
/petsc/src/tao/linesearch/impls/armijo/armijo.c
/petsc/src/tao/linesearch/impls/armijo/armijo.h
/petsc/src/tao/linesearch/impls/gpcglinesearch/gpcglinesearch.c
/petsc/src/tao/linesearch/impls/gpcglinesearch/gpcglinesearch.h
/petsc/src/tao/linesearch/impls/morethuente/morethuente.c
/petsc/src/tao/linesearch/impls/morethuente/morethuente.h
/petsc/src/tao/linesearch/impls/owarmijo/owarmijo.c
/petsc/src/tao/linesearch/impls/owarmijo/owarmijo.h
/petsc/src/tao/linesearch/interface/taolinesearch.c
/petsc/src/tao/matrix/adamat.c
/petsc/src/tao/pde_constrained/examples/tutorials/elliptic.c
/petsc/src/tao/pde_constrained/examples/tutorials/hyperbolic.c
/petsc/src/tao/pde_constrained/examples/tutorials/makefile
/petsc/src/tao/pde_constrained/examples/tutorials/parabolic.c
/petsc/src/tao/pde_constrained/impls/lcl/lcl.c
/petsc/src/tao/pde_constrained/impls/sqpcon/sqpcon.c
/petsc/src/tao/unconstrained/examples/tutorials/eptorsion1.c
/petsc/src/tao/unconstrained/examples/tutorials/eptorsion2.c
/petsc/src/tao/unconstrained/examples/tutorials/eptorsion2f.F
/petsc/src/tao/unconstrained/examples/tutorials/makefile
/petsc/src/tao/unconstrained/examples/tutorials/minsurf1.c
/petsc/src/tao/unconstrained/examples/tutorials/minsurf2.c
/petsc/src/tao/unconstrained/examples/tutorials/output/minsurf2_1.out
/petsc/src/tao/unconstrained/examples/tutorials/output/minsurf2_2.out
/petsc/src/tao/unconstrained/examples/tutorials/output/minsurf2_3.out
/petsc/src/tao/unconstrained/examples/tutorials/output/minsurf2_4.out
/petsc/src/tao/unconstrained/examples/tutorials/output/minsurf2_5.out
/petsc/src/tao/unconstrained/examples/tutorials/rosenbrock1.c
/petsc/src/tao/unconstrained/examples/tutorials/rosenbrock1f.F
/petsc/src/tao/unconstrained/impls/bmrm/bmrm.c
/petsc/src/tao/unconstrained/impls/cg/taocg.c
/petsc/src/tao/unconstrained/impls/lmvm/lmvm.c
/petsc/src/tao/unconstrained/impls/neldermead/neldermead.c
/petsc/src/tao/unconstrained/impls/nls/nls.c
/petsc/src/tao/unconstrained/impls/ntl/ntl.c
/petsc/src/tao/unconstrained/impls/ntr/ntr.c
/petsc/src/tao/unconstrained/impls/owlqn/owlqn.c
/petsc/src/tao/util/tao_util.c
/petsc/src/ts/interface/ts.c
/petsc/src/vec/is/ao/examples/tests/ex3d/makefile
/petsc/src/vec/is/utils/pmap.c
/petsc/src/vec/vec/examples/tests/ex43.c
/petsc/src/vec/vec/examples/tests/makefile
/petsc/src/vec/vec/examples/tests/output/ex3_2.out
/petsc/src/vec/vec/impls/mpi/mpicusp/mpicusp.cu
/petsc/src/vec/vec/impls/mpi/mpiviennacl/makefile
/petsc/src/vec/vec/impls/mpi/mpiviennacl/mpiviennacl.cxx
/petsc/src/vec/vec/impls/mpi/pbvec.c
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/impls/seq/seqcusp/veccusp.cu
/petsc/src/vec/vec/impls/seq/seqviennacl/makefile
/petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/vinv.c
1304856126-Feb-2014 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Added braindead simple parallel orientation solver
- This gathers the graph to proc 0, solves, and scatters the answer
- Need to store neighbor ranks and matches for each neighbor
- This shou

DMPlex: Added braindead simple parallel orientation solver
- This gathers the graph to proc 0, solves, and scatters the answer
- Need to store neighbor ranks and matches for each neighbor
- This should be replaced with a parallel BFS

show more ...


plex.c
5b7033fc26-Feb-2014 Matthew G. Knepley <knepley@gmail.com>

DMPlex: For 1D orientation, you have to use cone position rather than face orientation


plex.c
ef90cfe224-Feb-2014 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Correct error introduced when optimizing closure actions
- A single field may still have multiple components
- This error should have been detected by nightlies, but there is too much noise i

DMPlex: Correct error introduced when optimizing closure actions
- A single field may still have multiple components
- This error should have been detected by nightlies, but there is too much noise in the output now

show more ...


/petsc/include/petsc-private/dtimpl.h
plex.c
/petsc/src/snes/examples/tutorials/ex62.c
18abd76318-Feb-2014 Matthew G. Knepley <knepley@gmail.com>

DM: Cast cleanup for DMGetField()


plex.c
/petsc/src/snes/examples/tutorials/ex12.c
fd59a86718-Feb-2014 Matthew G. Knepley <knepley@gmail.com>

DM: If the local section is not present, it will be created automatically from PetscFE structures and boundary conditions
- Added createdefaultsection() to DM


/petsc/include/petsc-private/dmimpl.h
plex.c
plexcreate.c
/petsc/src/dm/interface/dm.c
6c73c22c18-Feb-2014 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Added DMBoundary struct
- This will replace the stuff in TS ex11


/petsc/include/petsc-private/dmimpl.h
/petsc/include/petsc-private/dmpleximpl.h
/petsc/include/petscdm.h
/petsc/include/petscdmplex.h
/petsc/src/dm/impls/composite/pack.c
plex.c
plexcreate.c
plexfem.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmi.c
46b8517018-Feb-2014 Matthew G. Knepley <knepley@gmail.com>

DMLabel: Added DMLabelHasValue()


/petsc/include/petscdmplex.h
/petsc/src/dm/dt/interface/dtfe.c
plexlabel.c
/petsc/src/snes/examples/tutorials/output/ex12_31.out
/petsc/src/snes/examples/tutorials/output/ex12_32.out
/petsc/src/snes/examples/tutorials/output/ex12_36.out
2a5d012518-Feb-2014 Jed Brown <jed@jedbrown.org>

DMPlex: quash -Wmaybe-uninitialized


/petsc/config/BuildSystem/config/compilers.py
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/package.py
/petsc/config/PETSc/packages/elemental.py
/petsc/config/examples/arch-cray-xt6-pkgs-opt.py
/petsc/config/examples/arch-freebsd-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-freebsd-cxx-pkgs-opt.py
/petsc/config/examples/arch-freebsd-pkgs-opt.py
/petsc/config/examples/arch-linux-pkgs-cxx-mlib.py
/petsc/config/examples/arch-linux-pkgs-dbg-ftn-interfaces.py
/petsc/config/examples/arch-linux-pkgs-gcov.py
/petsc/config/examples/arch-linux-pkgs-opt-threadcomm.py
/petsc/config/examples/arch-linux-pkgs-opt.py
/petsc/config/examples/arch-linux-pkgs-threadcomm.py
/petsc/config/examples/arch-linux-pkgs-valgrind.py
/petsc/config/examples/arch-osx-10.6-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-osx-10.6-cxx-pkgs-opt.py
/petsc/gmakefile
/petsc/include/petscsys.h
/petsc/src/dm/dt/examples/tests/output/ex1_1.out
/petsc/src/dm/dt/interface/dt.c
plexrefine.c
/petsc/src/dm/impls/shell/dmshell.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddc.h
/petsc/src/ksp/pc/impls/bddc/bddcfetidp.c
/petsc/src/ksp/pc/impls/bddc/bddcgraph.c
/petsc/src/ksp/pc/impls/bddc/bddcnullspace.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.h
/petsc/src/ksp/pc/impls/bddc/bddcscalingbasic.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex19_composite_gs_newton.out
/petsc/src/sys/classes/draw/utils/lgc.c
/petsc/src/sys/memory/mal.c
/petsc/src/sys/memory/mtr.c
/petsc/src/sys/objects/ftn-custom/zstart.c
/petsc/src/sys/objects/ftn-custom/zstartf.c
/petsc/src/ts/examples/tutorials/ex10.c
/petsc/src/vec/vec/examples/tutorials/ex6.c
/petsc/src/vec/vec/utils/projection.c
bceba47717-Feb-2014 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Adding support for interpolation between regularly refined meshes
- Added DMPlexComputeInterpolatorFEM()
- Added PetscFERefine()
- Added PetscFEIntegrateInterpolator_Basic()
- Not working now

DMPlex: Adding support for interpolation between regularly refined meshes
- Added DMPlexComputeInterpolatorFEM()
- Added PetscFERefine()
- Added PetscFEIntegrateInterpolator_Basic()
- Not working now since coarse meshes do not have Sections attached

show more ...


/petsc/include/petscdmplex.h
/petsc/include/petscfe.h
/petsc/src/dm/dt/interface/dtfe.c
plex.c
plexcreate.c
plexfem.c
8026896c17-Feb-2014 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Fixed documentation
- FEMContext is now at the top of the user struct (hopefully remove this soon)


plexfem.c
21454ff517-Feb-2014 Matthew G. Knepley <knepley@gmail.com>

DT: PetscQuadrature is now a PetscObject
- Added PetscQuadratureGet/SetData()


/petsc/config/builder.py
/petsc/include/petscdmda.h
/petsc/include/petscdt.h
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/impls/da/dageometry.c
/petsc/src/dm/impls/da/dalocal.c
plexfem.c
93b9b95715-Feb-2014 Matthew G. Knepley <knepley@gmail.com>

Merge branch 'knepley/fix-plex-refine-sf'

* knepley/fix-plex-refine-sf:
SF: Added additional checking
DMPlex: Fixed SF created during refinement - Remote edge had wrong starting point - Forgot a

Merge branch 'knepley/fix-plex-refine-sf'

* knepley/fix-plex-refine-sf:
SF: Added additional checking
DMPlex: Fixed SF created during refinement - Remote edge had wrong starting point - Forgot an entry for hybrid edge

show more ...


/petsc/config/BuildSystem/config/package.py
/petsc/config/PETSc/packages/Chaco.py
/petsc/config/examples/arch-freebsd-cxx-cmplx-pkgs-dbg.py
/petsc/include/finclude/petscsys.h
/petsc/src/dm/examples/tutorials/makefile
plexrefine.c
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/index.html
/petsc/src/ksp/ksp/examples/tests/ex11.c
/petsc/src/ksp/ksp/examples/tests/ex20.c
/petsc/src/ksp/ksp/examples/tutorials/ex56.c
/petsc/src/mat/examples/tutorials/ex9.c
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/mffd/mffdimpl.h
/petsc/src/mat/interface/ftn-custom/zmatrixf.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tests/ex7.c
/petsc/src/snes/examples/tutorials/ex48.c
/petsc/src/snes/examples/tutorials/ex9.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snespc.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/snes/mf/snesmfj.c
/petsc/src/sys/fsrc/somefort.F
/petsc/src/sys/objects/ftn-custom/zstartf.c
/petsc/src/tao/leastsquares/examples/tutorials/chwirut2f.F
/petsc/src/ts/examples/tutorials/ex9.c
/petsc/src/vec/is/sf/interface/sf.c
/petsc/src/vec/vec/examples/tutorials/ex1.c
/petsc/src/vec/vec/examples/tutorials/ex18.c
/petsc/src/vec/vec/utils/vecmpitoseq.c
62ad4a6a15-Feb-2014 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Fixed some small mistakes
- Initialize var
- Declare at the top of the block
- Added cone size call


plex.c
6551ba1f12-Feb-2014 Jed Brown <jed@jedbrown.org>

Merge remote-tracking branch 'bb/knepley/fix-include-paths'

* bb/knepley/fix-include-paths:
DMPlex: Fix compiler warning
Fix include format

Conflicts:
src/mat/impls/aij/mpi/mpicusparse/mpiaijc

Merge remote-tracking branch 'bb/knepley/fix-include-paths'

* bb/knepley/fix-include-paths:
DMPlex: Fix compiler warning
Fix include format

Conflicts:
src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu
src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu

show more ...


/petsc/bin/maint/toclapack.sh
/petsc/conf/rules
/petsc/config/BuildSystem/config/packages/f2cblaslapack.py
/petsc/include/finclude/makefile
/petsc/include/finclude/petsc.h
/petsc/include/finclude/petsc.h90
/petsc/include/finclude/petscpcdef.h
/petsc/include/petsc-private/fortranimpl.h
/petsc/include/petsc-private/snesimpl.h
/petsc/include/petsc.h
/petsc/include/petscmath.h
/petsc/include/petscpc.h
/petsc/include/petscsnes.h
/petsc/include/petscsys.h
/petsc/include/petscviewer.h
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/f90-mod/petscdmmod.F
/petsc/src/dm/impls/makefile
plexvtu.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmregall.c
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/miscellaneous/acknwldg.html
/petsc/src/ksp/ksp/examples/tests/ex42.c
/petsc/src/ksp/ksp/examples/tests/output/ex42.out
/petsc/src/ksp/ksp/examples/tests/output/ex42_2.out
/petsc/src/ksp/ksp/examples/tutorials/ex43.c
/petsc/src/ksp/ksp/examples/tutorials/ex51.c
/petsc/src/ksp/ksp/examples/tutorials/ex8g.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/impls/minres/minres.c
/petsc/src/ksp/pc/impls/gamg/classical.c
/petsc/src/ksp/pc/impls/gasm/gasm.c
/petsc/src/ksp/pc/impls/makefile
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/interface/pcregis.c
/petsc/src/mat/examples/tests/ex15.c
/petsc/src/mat/impls/aij/mpi/mpicusp/mpiaijcusp.cu
/petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/snes/examples/tutorials/ex15.c
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/fas/fasfunc.c
/petsc/src/snes/impls/fas/fasgalerkin.c
/petsc/src/snes/impls/fas/fasimpls.h
/petsc/src/snes/impls/gs/snesgs.c
/petsc/src/snes/impls/ms/ms.c
/petsc/src/snes/impls/nasm/nasm.c
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/impls/ngmres/anderson.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/sys/classes/viewer/impls/string/stringv.c
/petsc/src/sys/ftn-custom/zsys.c
/petsc/src/sys/objects/ptype.c
/petsc/src/sys/utils/str.c
/petsc/src/tao/bound/examples/tutorials/jbearing2.c
/petsc/src/tao/bound/examples/tutorials/plate2.c
/petsc/src/tao/bound/examples/tutorials/plate2f.F
/petsc/src/tao/complementarity/examples/tutorials/blackscholes.c
/petsc/src/tao/interface/taosolver.c
/petsc/src/tao/unconstrained/examples/tutorials/eptorsion2.c
/petsc/src/tao/unconstrained/examples/tutorials/eptorsion2f.F
/petsc/src/tao/unconstrained/examples/tutorials/minsurf2.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex10.c
/petsc/src/ts/examples/tutorials/power_grid/ex2.c
/petsc/src/ts/examples/tutorials/power_grid/ex6.c
/petsc/src/ts/examples/tutorials/power_grid/ex7.c
/petsc/src/ts/examples/tutorials/power_grid/ex8.c
/petsc/src/ts/f90-mod/petsctsmod.F
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/interface/ts.c
/petsc/src/vec/is/sf/examples/tutorials/ex1.c
fedde07608-Feb-2014 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Added parallel stage to DMPlexOrient()
- The coarse solver is not implemented, so only works for p=2


/petsc/conf/rules
/petsc/include/finclude/petsckspdef.h
/petsc/include/petsc-private/snesimpl.h
/petsc/include/petscbt.h
/petsc/include/petscsys.h
plex.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/website/documentation/tutorials/index.html
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/gs/snesgs.c
/petsc/src/snes/impls/ms/ms.c
/petsc/src/snes/impls/nasm/nasm.c
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/impls/ngmres/anderson.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/sys/utils/str.c
/petsc/src/ts/interface/ts.c

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