History log of /petsc/src/dm/impls/plex/ (Results 5576 – 5600 of 5874)
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74ef644b31-Jul-2013 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Use BFS to calculate depth rather than crazy recursive scheme

0e49e2e230-Jul-2013 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Propagate orientations in cohesive cell creation
- Also fix hybrid bounds


/petsc/bin/maint/builddist
/petsc/bin/matlab/PetscBagRead.m
/petsc/conf/test
/petsc/config/BuildSystem/config/base.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/MOAB.py
/petsc/config/BuildSystem/config/packages/exodusii.py
/petsc/config/BuildSystem/config/programs.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/packages/Zoltan.py
/petsc/config/PETSc/packages/cmake.py
/petsc/config/PETSc/packages/elemental.py
/petsc/config/PETSc/packages/scalapack.py
/petsc/config/PETSc/packages/sundials.py
/petsc/include/finclude/petscmat.h
/petsc/include/finclude/petscpc.h
/petsc/include/petsc-private/bagimpl.h
/petsc/include/petscbag.h
/petsc/include/petscerror.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/include/petscvec.h
/petsc/include/petscversion.h
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/examples/tests/ex7.c
/petsc/src/dm/examples/tutorials/ex14.c
/petsc/src/dm/examples/tutorials/ex7.c
/petsc/src/dm/impls/da/dacorn.c
/petsc/src/dm/impls/da/dadd.c
examples/tests/output/ex5_0.out
examples/tests/output/ex5_1.out
examples/tests/output/ex5_2.out
examples/tests/output/ex5_3.out
examples/tests/output/ex5_4.out
examples/tests/output/ex5_5.out
examples/tests/output/ex5_6.out
examples/tests/output/ex5_7.out
plexsubmesh.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/developers/index.html
/petsc/src/docs/website/documentation/changes/34.html
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/tutorials/index.html
/petsc/src/docs/website/download/index.html
/petsc/src/ksp/ksp/examples/tests/ex28.c
/petsc/src/ksp/ksp/examples/tests/ex30.c
/petsc/src/ksp/ksp/examples/tests/ex43.c
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tests/output/ex11_1.out
/petsc/src/ksp/ksp/examples/tests/output/ex11_2.out
/petsc/src/ksp/ksp/examples/tests/output/ex28.out
/petsc/src/ksp/ksp/examples/tests/output/ex28_2.out
/petsc/src/ksp/ksp/examples/tests/output/ex30.out
/petsc/src/ksp/ksp/examples/tests/output/ex30_2.out
/petsc/src/ksp/ksp/examples/tests/output/ex43.out
/petsc/src/ksp/ksp/examples/tests/output/ex43_2.out
/petsc/src/ksp/ksp/examples/tests/output/ex43_3.out
/petsc/src/ksp/ksp/examples/tests/output/ex43_4.out
/petsc/src/ksp/ksp/examples/tests/output/ex43_5.out
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_aijcusparse.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_mpicrl.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_mpicsrperm.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_seqcrl.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_seqcsrperm.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex34_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex49_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex50.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex50_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex54_classical.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex55_classical.out
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddcgraph.c
/petsc/src/ksp/pc/impls/bddc/bddcnullspace.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.h
/petsc/src/ksp/pc/impls/bddc/bddcstructs.h
/petsc/src/ksp/pc/impls/factor/factimpl.c
/petsc/src/ksp/pc/impls/factor/factor.c
/petsc/src/ksp/pc/impls/factor/factor.h
/petsc/src/ksp/pc/impls/factor/icc/icc.c
/petsc/src/ksp/pc/impls/factor/ilu/ilu.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/classical.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/gamg.h
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/gamg/makefile
/petsc/src/ksp/pc/impls/mg/ftn-custom/zmgfuncf.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/mg/mgfunc.c
/petsc/src/ksp/pc/impls/mg/mgimpl.h
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/mat/examples/tests/ex1.c
/petsc/src/mat/examples/tests/ex163.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex114_2.out
/petsc/src/mat/examples/tests/output/ex114_3.out
/petsc/src/mat/examples/tests/output/ex163.out
/petsc/src/mat/examples/tests/output/ex93_1.out
/petsc/src/mat/examples/tests/output/ex93_2.out
/petsc/src/mat/impls/aij/mpi/makefile
/petsc/src/mat/impls/aij/mpi/mpiaij.h
/petsc/src/mat/impls/aij/mpi/mpicusparse/makefile
/petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu
/petsc/src/mat/impls/aij/mpi/mpicusparse/mpicusparsematimpl.h
/petsc/src/mat/impls/aij/mpi/mpimatmatmatmult.c
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/aij/mpi/mpimattransposematmult.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/makefile
/petsc/src/mat/impls/aij/seq/matlab/aijmatlab.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/impls/aij/seq/matrart.c
/petsc/src/mat/impls/aij/seq/mattransposematmult.c
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h
/petsc/src/mat/impls/aij/seq/seqcusparse/makefile
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/mpi/mpidense.h
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/dense/seq/dense.h
/petsc/src/mat/impls/elemental/matelem.cxx
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/matregis.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/partition/impls/chaco/chaco.c
/petsc/src/snes/examples/tests/output/ex17_1.out
/petsc/src/snes/examples/tests/output/ex1_3.out
/petsc/src/snes/examples/tutorials/ex14.c
/petsc/src/snes/examples/tutorials/output/ex18_1.out
/petsc/src/snes/examples/tutorials/output/ex19_10.out
/petsc/src/snes/examples/tutorials/output/ex19_13.out
/petsc/src/snes/examples/tutorials/output/ex19_6.out
/petsc/src/snes/examples/tutorials/output/ex19_7.out
/petsc/src/snes/examples/tutorials/output/ex19_9.out
/petsc/src/snes/examples/tutorials/output/ex19_ngmres_fas_ms.out
/petsc/src/snes/examples/tutorials/output/ex20_1.out
/petsc/src/snes/examples/tutorials/output/ex2_1.out
/petsc/src/snes/examples/tutorials/output/ex40f90.out
/petsc/src/snes/examples/tutorials/output/ex46_1.out
/petsc/src/snes/examples/tutorials/output/ex48_4.out
/petsc/src/snes/examples/tutorials/output/ex5_1.out
/petsc/src/snes/examples/tutorials/output/ex5_2.out
/petsc/src/snes/examples/tutorials/output/ex5_3.out
/petsc/src/snes/examples/tutorials/output/ex5_4.out
/petsc/src/snes/examples/tutorials/output/ex5_5.out
/petsc/src/snes/examples/tutorials/output/ex70_0.out
/petsc/src/snes/examples/tutorials/output/ex70_1.out
/petsc/src/snes/impls/composite/snescomposite.c
/petsc/src/snes/impls/ngmres/anderson.c
/petsc/src/snes/impls/ngmres/ngmresfunc.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/ngmres/snesngmres.h
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/linesearch/impls/cp/linesearchcp.c
/petsc/src/snes/linesearch/impls/l2/linesearchl2.c
/petsc/src/sys/classes/bag/bag.c
/petsc/src/sys/classes/bag/f90-custom/zbagf90.c
/petsc/src/sys/classes/bag/makefile
/petsc/src/sys/classes/matlabengine/matlab.c
/petsc/src/sys/classes/viewer/impls/ascii/filev.c
/petsc/src/sys/classes/viewer/impls/socket/matlab/sopen.c
/petsc/src/sys/error/pstack.c
/petsc/src/sys/examples/tutorials/ex5.c
/petsc/src/sys/examples/tutorials/ex5f90.F90
/petsc/src/sys/logging/ftn-custom/zplogf.c
/petsc/src/sys/memory/mtr.c
/petsc/src/sys/objects/ftn-custom/zstart.c
/petsc/src/sys/objects/inherit.c
/petsc/src/sys/objects/init.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/threadcomm/interface/threadcomm.c
/petsc/src/sys/time/makefile
/petsc/src/ts/examples/tutorials/ex13.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/examples/tutorials/output/ex13_1.out
/petsc/src/ts/examples/tutorials/output/ex15_1.out
/petsc/src/vec/is/ao/examples/tests/output/ex1_1.out
/petsc/src/vec/is/ao/examples/tests/output/ex1_2.out
/petsc/src/vec/is/ao/examples/tests/output/ex1_3.out
/petsc/src/vec/vec/examples/tests/output/ex37_1.out
/petsc/src/vec/vec/examples/tests/output/ex37_2.out
/petsc/src/vec/vec/impls/seq/seqcusp/cuspvecimpl.h
/petsc/src/vec/vec/impls/seq/seqcusp/veccusp.cu
/petsc/src/vec/vec/utils/veccusp/makefile
/petsc/src/vec/vec/utils/veccusp/vscatcusp.c
/petsc/src/vec/vec/utils/vpscat.h
aa50250d30-Jul-2013 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Now use DMPlexGetDepthLabel() to interrogate point depths


/petsc/bin/maint/builddist
/petsc/bin/matlab/PetscBagRead.m
/petsc/conf/test
/petsc/config/BuildSystem/config/base.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/MOAB.py
/petsc/config/BuildSystem/config/packages/exodusii.py
/petsc/config/BuildSystem/config/programs.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/packages/Zoltan.py
/petsc/config/PETSc/packages/cmake.py
/petsc/config/PETSc/packages/elemental.py
/petsc/config/PETSc/packages/scalapack.py
/petsc/config/PETSc/packages/sundials.py
/petsc/include/finclude/petscmat.h
/petsc/include/finclude/petscpc.h
/petsc/include/petsc-private/bagimpl.h
/petsc/include/petscbag.h
/petsc/include/petscdmplex.h
/petsc/include/petscerror.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/include/petscvec.h
/petsc/include/petscversion.h
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/examples/tests/ex7.c
/petsc/src/dm/examples/tutorials/ex14.c
/petsc/src/dm/examples/tutorials/ex7.c
/petsc/src/dm/impls/da/dacorn.c
/petsc/src/dm/impls/da/dadd.c
plex.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/developers/index.html
/petsc/src/docs/website/documentation/changes/34.html
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/tutorials/index.html
/petsc/src/docs/website/download/index.html
/petsc/src/ksp/ksp/examples/tests/ex28.c
/petsc/src/ksp/ksp/examples/tests/ex30.c
/petsc/src/ksp/ksp/examples/tests/ex43.c
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tests/output/ex11_1.out
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/petsc/src/ksp/ksp/examples/tests/output/ex28_2.out
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/petsc/src/ksp/ksp/examples/tests/output/ex30_2.out
/petsc/src/ksp/ksp/examples/tests/output/ex43.out
/petsc/src/ksp/ksp/examples/tests/output/ex43_2.out
/petsc/src/ksp/ksp/examples/tests/output/ex43_3.out
/petsc/src/ksp/ksp/examples/tests/output/ex43_4.out
/petsc/src/ksp/ksp/examples/tests/output/ex43_5.out
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_aijcusparse.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_mpicrl.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_mpicsrperm.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_seqcrl.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_seqcsrperm.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex34_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex49_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex50.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex50_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex54_classical.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex55_classical.out
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddcgraph.c
/petsc/src/ksp/pc/impls/bddc/bddcnullspace.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.h
/petsc/src/ksp/pc/impls/bddc/bddcstructs.h
/petsc/src/ksp/pc/impls/factor/factimpl.c
/petsc/src/ksp/pc/impls/factor/factor.c
/petsc/src/ksp/pc/impls/factor/factor.h
/petsc/src/ksp/pc/impls/factor/icc/icc.c
/petsc/src/ksp/pc/impls/factor/ilu/ilu.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/classical.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/gamg.h
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/gamg/makefile
/petsc/src/ksp/pc/impls/mg/ftn-custom/zmgfuncf.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/mg/mgfunc.c
/petsc/src/ksp/pc/impls/mg/mgimpl.h
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/mat/examples/tests/ex1.c
/petsc/src/mat/examples/tests/ex163.c
/petsc/src/mat/examples/tests/makefile
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/petsc/src/mat/examples/tests/output/ex114_3.out
/petsc/src/mat/examples/tests/output/ex163.out
/petsc/src/mat/examples/tests/output/ex93_1.out
/petsc/src/mat/examples/tests/output/ex93_2.out
/petsc/src/mat/impls/aij/mpi/makefile
/petsc/src/mat/impls/aij/mpi/mpiaij.h
/petsc/src/mat/impls/aij/mpi/mpicusparse/makefile
/petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu
/petsc/src/mat/impls/aij/mpi/mpicusparse/mpicusparsematimpl.h
/petsc/src/mat/impls/aij/mpi/mpimatmatmatmult.c
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/aij/mpi/mpimattransposematmult.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/makefile
/petsc/src/mat/impls/aij/seq/matlab/aijmatlab.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/impls/aij/seq/matrart.c
/petsc/src/mat/impls/aij/seq/mattransposematmult.c
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h
/petsc/src/mat/impls/aij/seq/seqcusparse/makefile
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/mpi/mpidense.h
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/dense/seq/dense.h
/petsc/src/mat/impls/elemental/matelem.cxx
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/matregis.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/partition/impls/chaco/chaco.c
/petsc/src/snes/examples/tests/output/ex17_1.out
/petsc/src/snes/examples/tests/output/ex1_3.out
/petsc/src/snes/examples/tutorials/ex14.c
/petsc/src/snes/examples/tutorials/output/ex18_1.out
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/petsc/src/snes/examples/tutorials/output/ex19_9.out
/petsc/src/snes/examples/tutorials/output/ex19_ngmres_fas_ms.out
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/petsc/src/snes/examples/tutorials/output/ex2_1.out
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/petsc/src/snes/examples/tutorials/output/ex5_3.out
/petsc/src/snes/examples/tutorials/output/ex5_4.out
/petsc/src/snes/examples/tutorials/output/ex5_5.out
/petsc/src/snes/examples/tutorials/output/ex70_0.out
/petsc/src/snes/examples/tutorials/output/ex70_1.out
/petsc/src/snes/impls/composite/snescomposite.c
/petsc/src/snes/impls/ngmres/anderson.c
/petsc/src/snes/impls/ngmres/ngmresfunc.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/ngmres/snesngmres.h
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/linesearch/impls/cp/linesearchcp.c
/petsc/src/snes/linesearch/impls/l2/linesearchl2.c
/petsc/src/sys/classes/bag/bag.c
/petsc/src/sys/classes/bag/f90-custom/zbagf90.c
/petsc/src/sys/classes/bag/makefile
/petsc/src/sys/classes/matlabengine/matlab.c
/petsc/src/sys/classes/viewer/impls/ascii/filev.c
/petsc/src/sys/classes/viewer/impls/socket/matlab/sopen.c
/petsc/src/sys/error/pstack.c
/petsc/src/sys/examples/tutorials/ex5.c
/petsc/src/sys/examples/tutorials/ex5f90.F90
/petsc/src/sys/logging/ftn-custom/zplogf.c
/petsc/src/sys/memory/mtr.c
/petsc/src/sys/objects/ftn-custom/zstart.c
/petsc/src/sys/objects/inherit.c
/petsc/src/sys/objects/init.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/threadcomm/interface/threadcomm.c
/petsc/src/sys/time/makefile
/petsc/src/ts/examples/tutorials/ex13.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/examples/tutorials/output/ex13_1.out
/petsc/src/ts/examples/tutorials/output/ex15_1.out
/petsc/src/vec/is/ao/examples/tests/output/ex1_1.out
/petsc/src/vec/is/ao/examples/tests/output/ex1_2.out
/petsc/src/vec/is/ao/examples/tests/output/ex1_3.out
/petsc/src/vec/vec/examples/tests/output/ex37_1.out
/petsc/src/vec/vec/examples/tests/output/ex37_2.out
/petsc/src/vec/vec/impls/seq/seqcusp/cuspvecimpl.h
/petsc/src/vec/vec/impls/seq/seqcusp/veccusp.cu
/petsc/src/vec/vec/utils/veccusp/makefile
/petsc/src/vec/vec/utils/veccusp/vscatcusp.c
/petsc/src/vec/vec/utils/vpscat.h
b96ba59230-Jul-2013 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Added new events for distribution


/petsc/bin/maint/builddist
/petsc/bin/matlab/PetscBagRead.m
/petsc/conf/test
/petsc/config/BuildSystem/config/base.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/MOAB.py
/petsc/config/BuildSystem/config/packages/exodusii.py
/petsc/config/BuildSystem/config/programs.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/packages/Zoltan.py
/petsc/config/PETSc/packages/cmake.py
/petsc/config/PETSc/packages/elemental.py
/petsc/config/PETSc/packages/scalapack.py
/petsc/config/PETSc/packages/sundials.py
/petsc/include/finclude/petscmat.h
/petsc/include/finclude/petscpc.h
/petsc/include/petsc-private/bagimpl.h
/petsc/include/petsc-private/dmpleximpl.h
/petsc/include/petscbag.h
/petsc/include/petscerror.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/include/petscvec.h
/petsc/include/petscversion.h
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/examples/tests/ex7.c
/petsc/src/dm/examples/tutorials/ex14.c
/petsc/src/dm/examples/tutorials/ex7.c
/petsc/src/dm/impls/da/dacorn.c
/petsc/src/dm/impls/da/dadd.c
plex.c
/petsc/src/dm/interface/dlregisdmdm.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/developers/index.html
/petsc/src/docs/website/documentation/changes/34.html
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/tutorials/index.html
/petsc/src/docs/website/download/index.html
/petsc/src/ksp/ksp/examples/tests/ex28.c
/petsc/src/ksp/ksp/examples/tests/ex30.c
/petsc/src/ksp/ksp/examples/tests/ex43.c
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tests/output/ex11_1.out
/petsc/src/ksp/ksp/examples/tests/output/ex11_2.out
/petsc/src/ksp/ksp/examples/tests/output/ex28.out
/petsc/src/ksp/ksp/examples/tests/output/ex28_2.out
/petsc/src/ksp/ksp/examples/tests/output/ex30.out
/petsc/src/ksp/ksp/examples/tests/output/ex30_2.out
/petsc/src/ksp/ksp/examples/tests/output/ex43.out
/petsc/src/ksp/ksp/examples/tests/output/ex43_2.out
/petsc/src/ksp/ksp/examples/tests/output/ex43_3.out
/petsc/src/ksp/ksp/examples/tests/output/ex43_4.out
/petsc/src/ksp/ksp/examples/tests/output/ex43_5.out
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_aijcusparse.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_mpicrl.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_mpicsrperm.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_seqcrl.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_seqcsrperm.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex34_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex49_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex50.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex50_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex54_classical.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex55_classical.out
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddcgraph.c
/petsc/src/ksp/pc/impls/bddc/bddcnullspace.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.h
/petsc/src/ksp/pc/impls/bddc/bddcstructs.h
/petsc/src/ksp/pc/impls/factor/factimpl.c
/petsc/src/ksp/pc/impls/factor/factor.c
/petsc/src/ksp/pc/impls/factor/factor.h
/petsc/src/ksp/pc/impls/factor/icc/icc.c
/petsc/src/ksp/pc/impls/factor/ilu/ilu.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/classical.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/gamg.h
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/gamg/makefile
/petsc/src/ksp/pc/impls/mg/ftn-custom/zmgfuncf.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/mg/mgfunc.c
/petsc/src/ksp/pc/impls/mg/mgimpl.h
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/mat/examples/tests/ex1.c
/petsc/src/mat/examples/tests/ex163.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex114_2.out
/petsc/src/mat/examples/tests/output/ex114_3.out
/petsc/src/mat/examples/tests/output/ex163.out
/petsc/src/mat/examples/tests/output/ex93_1.out
/petsc/src/mat/examples/tests/output/ex93_2.out
/petsc/src/mat/impls/aij/mpi/makefile
/petsc/src/mat/impls/aij/mpi/mpiaij.h
/petsc/src/mat/impls/aij/mpi/mpicusparse/makefile
/petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu
/petsc/src/mat/impls/aij/mpi/mpicusparse/mpicusparsematimpl.h
/petsc/src/mat/impls/aij/mpi/mpimatmatmatmult.c
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/aij/mpi/mpimattransposematmult.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/makefile
/petsc/src/mat/impls/aij/seq/matlab/aijmatlab.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/impls/aij/seq/matrart.c
/petsc/src/mat/impls/aij/seq/mattransposematmult.c
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h
/petsc/src/mat/impls/aij/seq/seqcusparse/makefile
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/mpi/mpidense.h
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/dense/seq/dense.h
/petsc/src/mat/impls/elemental/matelem.cxx
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/matregis.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/partition/impls/chaco/chaco.c
/petsc/src/snes/examples/tests/output/ex17_1.out
/petsc/src/snes/examples/tests/output/ex1_3.out
/petsc/src/snes/examples/tutorials/ex14.c
/petsc/src/snes/examples/tutorials/output/ex18_1.out
/petsc/src/snes/examples/tutorials/output/ex19_10.out
/petsc/src/snes/examples/tutorials/output/ex19_13.out
/petsc/src/snes/examples/tutorials/output/ex19_6.out
/petsc/src/snes/examples/tutorials/output/ex19_7.out
/petsc/src/snes/examples/tutorials/output/ex19_9.out
/petsc/src/snes/examples/tutorials/output/ex19_ngmres_fas_ms.out
/petsc/src/snes/examples/tutorials/output/ex20_1.out
/petsc/src/snes/examples/tutorials/output/ex2_1.out
/petsc/src/snes/examples/tutorials/output/ex40f90.out
/petsc/src/snes/examples/tutorials/output/ex46_1.out
/petsc/src/snes/examples/tutorials/output/ex48_4.out
/petsc/src/snes/examples/tutorials/output/ex5_1.out
/petsc/src/snes/examples/tutorials/output/ex5_2.out
/petsc/src/snes/examples/tutorials/output/ex5_3.out
/petsc/src/snes/examples/tutorials/output/ex5_4.out
/petsc/src/snes/examples/tutorials/output/ex5_5.out
/petsc/src/snes/examples/tutorials/output/ex70_0.out
/petsc/src/snes/examples/tutorials/output/ex70_1.out
/petsc/src/snes/impls/composite/snescomposite.c
/petsc/src/snes/impls/ngmres/anderson.c
/petsc/src/snes/impls/ngmres/ngmresfunc.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/ngmres/snesngmres.h
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/linesearch/impls/cp/linesearchcp.c
/petsc/src/snes/linesearch/impls/l2/linesearchl2.c
/petsc/src/sys/classes/bag/bag.c
/petsc/src/sys/classes/bag/f90-custom/zbagf90.c
/petsc/src/sys/classes/bag/makefile
/petsc/src/sys/classes/matlabengine/matlab.c
/petsc/src/sys/classes/viewer/impls/ascii/filev.c
/petsc/src/sys/classes/viewer/impls/socket/matlab/sopen.c
/petsc/src/sys/error/pstack.c
/petsc/src/sys/examples/tutorials/ex5.c
/petsc/src/sys/examples/tutorials/ex5f90.F90
/petsc/src/sys/logging/ftn-custom/zplogf.c
/petsc/src/sys/memory/mtr.c
/petsc/src/sys/objects/ftn-custom/zstart.c
/petsc/src/sys/objects/inherit.c
/petsc/src/sys/objects/init.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/threadcomm/interface/threadcomm.c
/petsc/src/sys/time/makefile
/petsc/src/ts/examples/tutorials/ex13.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/examples/tutorials/output/ex13_1.out
/petsc/src/ts/examples/tutorials/output/ex15_1.out
/petsc/src/vec/is/ao/examples/tests/output/ex1_1.out
/petsc/src/vec/is/ao/examples/tests/output/ex1_2.out
/petsc/src/vec/is/ao/examples/tests/output/ex1_3.out
/petsc/src/vec/vec/examples/tests/output/ex37_1.out
/petsc/src/vec/vec/examples/tests/output/ex37_2.out
/petsc/src/vec/vec/impls/seq/seqcusp/cuspvecimpl.h
/petsc/src/vec/vec/impls/seq/seqcusp/veccusp.cu
/petsc/src/vec/vec/utils/veccusp/makefile
/petsc/src/vec/vec/utils/veccusp/vscatcusp.c
/petsc/src/vec/vec/utils/vpscat.h
f17f355020-Jul-2013 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Fix hybrid bounds for interpolated mesh with cohesive cells

9a35637020-Jul-2013 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Fixes for cohesive label reconstruction
- Do not put cohesive edges in labels
- Do not reconstruct "depth" label

2c8c000119-Jul-2013 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Remove unused variables

e81dd3a119-Jul-2013 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Removed unused variables

9a922efa18-Jul-2013 Matthew G. Knepley <knepley@gmail.com>

DM: Dammit, forgot declaration

63a16f1518-Jul-2013 Matthew G. Knepley <knepley@gmail.com>

DM: Small fix to DMClone for DMPlex

4d9407bc18-Jul-2013 Matthew G. Knepley <knepley@gmail.com>

DM: Added specialization for DMCreateSubDM() with a PetscSection
- Replace DMPlex implementation
- Is used by DMDA when a section is defined

3822169717-Jul-2013 Matthew G. Knepley <knepley@gmail.com>

DM: Added DMClone() which makes a shallow copy
- This is very useful for DM since it can have a lot of associated data and is used as a building block for different problems
- This replaces DMPlexClo

DM: Added DMClone() which makes a shallow copy
- This is very useful for DM since it can have a lot of associated data and is used as a building block for different problems
- This replaces DMPlexClone()

show more ...


/petsc/bin/maint/builddist
/petsc/bin/matlab/PetscBagRead.m
/petsc/config/BuildSystem/config/base.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/MOAB.py
/petsc/config/BuildSystem/config/packages/exodusii.py
/petsc/config/BuildSystem/config/programs.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/packages/Zoltan.py
/petsc/config/PETSc/packages/cmake.py
/petsc/config/PETSc/packages/scalapack.py
/petsc/config/PETSc/packages/sundials.py
/petsc/include/finclude/petscpc.h
/petsc/include/petsc-private/bagimpl.h
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petscbag.h
/petsc/include/petscdm.h
/petsc/include/petscerror.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/include/petscversion.h
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/examples/tutorials/ex14.c
/petsc/src/dm/examples/tutorials/ex7.c
/petsc/src/dm/impls/da/dacorn.c
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/da/dadd.c
plex.c
plexcreate.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/developers/index.html
/petsc/src/docs/website/documentation/changes/34.html
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/tutorials/index.html
/petsc/src/docs/website/download/index.html
/petsc/src/ksp/ksp/examples/tests/ex28.c
/petsc/src/ksp/ksp/examples/tests/ex30.c
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tests/output/ex11_1.out
/petsc/src/ksp/ksp/examples/tests/output/ex11_2.out
/petsc/src/ksp/ksp/examples/tests/output/ex28.out
/petsc/src/ksp/ksp/examples/tests/output/ex28_2.out
/petsc/src/ksp/ksp/examples/tests/output/ex30.out
/petsc/src/ksp/ksp/examples/tests/output/ex30_2.out
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_aijcusparse.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_mpicrl.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_mpicsrperm.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_seqcrl.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_seqcsrperm.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex34_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex50.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex50_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex54_classical.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex55_classical.out
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/pc/impls/factor/factimpl.c
/petsc/src/ksp/pc/impls/factor/factor.c
/petsc/src/ksp/pc/impls/factor/factor.h
/petsc/src/ksp/pc/impls/factor/icc/icc.c
/petsc/src/ksp/pc/impls/factor/ilu/ilu.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/classical.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/gamg.h
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/gamg/makefile
/petsc/src/ksp/pc/impls/mg/ftn-custom/zmgfuncf.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/mg/mgfunc.c
/petsc/src/ksp/pc/impls/mg/mgimpl.h
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/mat/examples/tests/ex1.c
/petsc/src/mat/examples/tests/ex163.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex114_2.out
/petsc/src/mat/examples/tests/output/ex114_3.out
/petsc/src/mat/examples/tests/output/ex163.out
/petsc/src/mat/examples/tests/output/ex93_1.out
/petsc/src/mat/examples/tests/output/ex93_2.out
/petsc/src/mat/impls/aij/mpi/makefile
/petsc/src/mat/impls/aij/mpi/mpiaij.h
/petsc/src/mat/impls/aij/mpi/mpimatmatmatmult.c
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/aij/mpi/mpimattransposematmult.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/makefile
/petsc/src/mat/impls/aij/seq/matlab/aijmatlab.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/impls/aij/seq/matrart.c
/petsc/src/mat/impls/aij/seq/mattransposematmult.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/mpi/mpidense.h
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/dense/seq/dense.h
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/partition/impls/chaco/chaco.c
/petsc/src/snes/examples/tests/output/ex17_1.out
/petsc/src/snes/examples/tutorials/ex14.c
/petsc/src/snes/examples/tutorials/output/ex18_1.out
/petsc/src/snes/examples/tutorials/output/ex19_10.out
/petsc/src/snes/examples/tutorials/output/ex19_13.out
/petsc/src/snes/examples/tutorials/output/ex19_6.out
/petsc/src/snes/examples/tutorials/output/ex19_7.out
/petsc/src/snes/examples/tutorials/output/ex19_9.out
/petsc/src/snes/examples/tutorials/output/ex19_ngmres_fas_ms.out
/petsc/src/snes/examples/tutorials/output/ex20_1.out
/petsc/src/snes/examples/tutorials/output/ex2_1.out
/petsc/src/snes/examples/tutorials/output/ex40f90.out
/petsc/src/snes/examples/tutorials/output/ex46_1.out
/petsc/src/snes/examples/tutorials/output/ex48_4.out
/petsc/src/snes/examples/tutorials/output/ex5_1.out
/petsc/src/snes/examples/tutorials/output/ex5_2.out
/petsc/src/snes/examples/tutorials/output/ex5_3.out
/petsc/src/snes/examples/tutorials/output/ex5_4.out
/petsc/src/snes/examples/tutorials/output/ex5_5.out
/petsc/src/snes/examples/tutorials/output/ex70_0.out
/petsc/src/snes/examples/tutorials/output/ex70_1.out
/petsc/src/snes/impls/composite/snescomposite.c
/petsc/src/snes/impls/ngmres/anderson.c
/petsc/src/snes/impls/ngmres/ngmresfunc.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/ngmres/snesngmres.h
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/linesearch/impls/cp/linesearchcp.c
/petsc/src/snes/linesearch/impls/l2/linesearchl2.c
/petsc/src/sys/classes/bag/bag.c
/petsc/src/sys/classes/bag/f90-custom/zbagf90.c
/petsc/src/sys/classes/bag/makefile
/petsc/src/sys/classes/matlabengine/matlab.c
/petsc/src/sys/classes/viewer/impls/ascii/filev.c
/petsc/src/sys/classes/viewer/impls/socket/matlab/sopen.c
/petsc/src/sys/error/pstack.c
/petsc/src/sys/examples/tutorials/ex5.c
/petsc/src/sys/examples/tutorials/ex5f90.F90
/petsc/src/sys/logging/ftn-custom/zplogf.c
/petsc/src/sys/memory/mtr.c
/petsc/src/sys/objects/ftn-custom/zstart.c
/petsc/src/sys/objects/inherit.c
/petsc/src/sys/objects/init.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/threadcomm/interface/threadcomm.c
/petsc/src/sys/time/makefile
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/ex13.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/examples/tutorials/output/ex13_1.out
/petsc/src/ts/examples/tutorials/output/ex15_1.out
/petsc/src/vec/is/ao/examples/tests/output/ex1_1.out
/petsc/src/vec/is/ao/examples/tests/output/ex1_2.out
/petsc/src/vec/is/ao/examples/tests/output/ex1_3.out
/petsc/src/vec/vec/examples/tests/output/ex37_1.out
/petsc/src/vec/vec/examples/tests/output/ex37_2.out
8c312ff309-Jul-2013 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Fixed bug in special case for DMPlexVecGetClosure()
- Need to set outgoing size if array is passed in

b6ebb6e609-Jul-2013 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Added special case for DMPlexVecSetClosure()
- Could add more modes

823f1b4f06-Jul-2013 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Uniform refinement does not work on uninterpolated meshes


/petsc/config/builder.py
plex.c
/petsc/src/docs/tex/petscapp.bib
/petsc/src/mat/examples/tests/ex1.c
/petsc/src/mat/examples/tests/ex163.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex163.out
/petsc/src/mat/impls/aij/mpi/makefile
/petsc/src/mat/impls/aij/mpi/mpiaij.h
/petsc/src/mat/impls/aij/mpi/mpimattransposematmult.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/makefile
/petsc/src/mat/impls/aij/seq/mattransposematmult.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/mpi/mpidense.h
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/dense/seq/dense.h
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tutorials/ex52.c
/petsc/src/snes/examples/tutorials/ex52_integrateElement.cu
/petsc/src/snes/examples/tutorials/ex52_integrateElementOpenCL.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex52_18.out
/petsc/src/snes/examples/tutorials/output/ex52_19.out
/petsc/src/snes/examples/tutorials/output/ex52_20.out
/petsc/src/snes/examples/tutorials/output/ex52_21.out
/petsc/src/snes/examples/tutorials/output/ex52_22.out
/petsc/src/snes/examples/tutorials/output/ex52_23.out
/petsc/src/snes/examples/tutorials/output/ex52_24.out
/petsc/src/snes/examples/tutorials/output/ex52_25.out
/petsc/src/snes/examples/tutorials/output/ex52_26.out
/petsc/src/snes/examples/tutorials/output/ex52_27.out
/petsc/src/snes/examples/tutorials/output/ex52_28.out
/petsc/src/snes/examples/tutorials/output/ex52_29.out
/petsc/src/snes/examples/tutorials/output/ex52_30.out
/petsc/src/snes/examples/tutorials/output/ex52_31.out
/petsc/src/snes/examples/tutorials/output/ex52_32.out
/petsc/src/snes/examples/tutorials/output/ex52_33.out
/petsc/src/snes/examples/tutorials/output/ex52_34.out
/petsc/src/snes/examples/tutorials/output/ex52_35.out
/petsc/src/sys/classes/viewer/impls/ascii/filev.c
/petsc/src/sys/objects/init.c
9df71ca406-Jul-2013 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Optimizations for DMPlexVecGetClosure()
- Removed branch (seems to have little effect)
- Removed calculation of size when array is provided (profiled for 20% effect)

7ec3949906-Jul-2013 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Fixed creation of global sections
- The size of neg[] must be all of nroots instead of pEnd-pStart

49c26ae404-Jul-2013 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Fixed cohesive submesh SF
- I misclassified points which were not owned in the original mesh, but are owned in the submesh

9e0823b203-Jul-2013 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Fixed bug with cohesive submesh SF
- Needed to put in owned subpoints since they do not come from leaves OR from the original mesh

8af1977128-Jun-2013 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Optimize depth retrieval by storing a pointer to the label
- This is a little unsafe since someone could go in and create a new "depth" label out from under you


/petsc/bin/matlab/PetscBagRead.m
/petsc/config/BuildSystem/config/base.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/MOAB.py
/petsc/include/finclude/petscpc.h
/petsc/include/petsc-private/bagimpl.h
/petsc/include/petsc-private/dmpleximpl.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/src/dm/examples/tutorials/ex7.c
plex.c
plexcreate.c
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/changes/34.html
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/ksp/examples/tests/ex30.c
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tests/output/ex11_1.out
/petsc/src/ksp/ksp/examples/tests/output/ex11_2.out
/petsc/src/ksp/ksp/examples/tests/output/ex30.out
/petsc/src/ksp/ksp/examples/tests/output/ex30_2.out
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_aijcusparse.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_mpicrl.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_mpicsrperm.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_seqcrl.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex10_seqcsrperm.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex34_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex50.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex50_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex54_classical.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex55_classical.out
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/pc/impls/factor/factimpl.c
/petsc/src/ksp/pc/impls/factor/factor.c
/petsc/src/ksp/pc/impls/factor/factor.h
/petsc/src/ksp/pc/impls/factor/icc/icc.c
/petsc/src/ksp/pc/impls/factor/ilu/ilu.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/classical.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/gamg.h
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/gamg/makefile
/petsc/src/ksp/pc/impls/mg/ftn-custom/zmgfuncf.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/mg/mgfunc.c
/petsc/src/ksp/pc/impls/mg/mgimpl.h
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/mat/examples/tests/ex1.c
/petsc/src/mat/examples/tests/ex163.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex163.out
/petsc/src/mat/impls/aij/mpi/makefile
/petsc/src/mat/impls/aij/mpi/mpiaij.h
/petsc/src/mat/impls/aij/mpi/mpimattransposematmult.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/makefile
/petsc/src/mat/impls/aij/seq/matlab/aijmatlab.c
/petsc/src/mat/impls/aij/seq/mattransposematmult.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/mpi/mpidense.h
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/dense/seq/dense.h
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/partition/impls/chaco/chaco.c
/petsc/src/snes/examples/tutorials/output/ex18_1.out
/petsc/src/snes/examples/tutorials/output/ex19_10.out
/petsc/src/snes/examples/tutorials/output/ex19_13.out
/petsc/src/snes/examples/tutorials/output/ex19_6.out
/petsc/src/snes/examples/tutorials/output/ex19_7.out
/petsc/src/snes/examples/tutorials/output/ex19_9.out
/petsc/src/snes/examples/tutorials/output/ex19_ngmres_fas_ms.out
/petsc/src/snes/examples/tutorials/output/ex20_1.out
/petsc/src/snes/examples/tutorials/output/ex40f90.out
/petsc/src/snes/examples/tutorials/output/ex46_1.out
/petsc/src/snes/examples/tutorials/output/ex48_4.out
/petsc/src/snes/examples/tutorials/output/ex5_1.out
/petsc/src/snes/examples/tutorials/output/ex5_2.out
/petsc/src/snes/examples/tutorials/output/ex5_3.out
/petsc/src/snes/examples/tutorials/output/ex5_4.out
/petsc/src/snes/examples/tutorials/output/ex5_5.out
/petsc/src/snes/examples/tutorials/output/ex70_0.out
/petsc/src/snes/examples/tutorials/output/ex70_1.out
/petsc/src/sys/classes/bag/bag.c
/petsc/src/sys/classes/bag/f90-custom/zbagf90.c
/petsc/src/sys/classes/bag/makefile
/petsc/src/sys/classes/matlabengine/matlab.c
/petsc/src/sys/classes/viewer/impls/ascii/filev.c
/petsc/src/sys/classes/viewer/impls/socket/matlab/sopen.c
/petsc/src/sys/objects/init.c
c201026628-Jun-2013 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Forgot one init for DMPlexVecGetClosure()

a1e4474526-Jun-2013 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Must initialize argument to DMPlexVecGetClosure()

4f25033a01-May-2013 Jed Brown <jedbrown@mcs.anl.gov>

DMPlex: fix argument to DMPlexVecRestoreClosure

Also add comment about centroid calculation.

724b532025-Jun-2013 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Fix orientation for VTU output

d92e47f825-Jun-2013 Matthew G. Knepley <knepley@gmail.com>

DMPlex: Fix out of bounds access for empty mesh

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