updated PETSc directory layout to match standard packaging strategiesinclude/petsc finclude,private,mpiunilib/petsc confbin/petsc*
simplify option object names
updated new XXXSetFromOptions_YYY() methods to take PetscOptionsObjectType
moved PetscOptionsObject from global variable to local variable in functions
manual merge of conflict
Merge branch 'barry/fix-options-default'Conflicts: src/ksp/ksp/examples/tutorials/ex52.c
update use of PetscOptionsBool() to not rely on default setting automatically
MatGetVecs() and KSPGetVecs() replaced with MatCreateVecs() and KSPCreateVecs()since they are creators not getters
Merge branch 'barry/fix-set-get-operators'
Merge branch 'jed/pcfieldsplit-getschurpre'* jed/pcfieldsplit-getschurpre: PCFieldSplit: fix PCFieldSplitSchurPrecondition name PCFieldSplit: add accessor for Schur preconditioner configuration
fixed locations in code where MatStructure argument had not been changedMost of these were due to code that did not get compiled in tests; also made sure all that code now gets compiled in tests
KSPSetOperators() no longer has the MatStructure argument. The Mat objects now track that information themselves. Use KPS/PCSetReusePreconditioner() to prevent the recomputation of the preconditioner
KSPSetOperators() no longer has the MatStructure argument. The Mat objects now track that information themselves. Use KPS/PCSetReusePreconditioner() to prevent the recomputation of the preconditioner if the operator changed in the way that SAME_PRECONDITIONER did with KSPSetOperators()SNES/TS still need to be cleaned up to better utilize the new interfaces
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PCFieldSplit: fix PCFieldSplitSchurPrecondition nameNow symmetric with newly-added PCFieldSplitGetSchurPre.
MatSchurComplementXXXSubMatrices renamed for consistency.
Sys: drop explicit type arguments from PetscNew() and PetscNewLog()git grep -l 'PetscNew\(Log\)\?(' -- $1 | xargs perl -pi -e 's@PetscNew\([^,;()]+ *, *@PetscNew(@;s@PetscNewLog\(([^,;()]+) *,[^,
Sys: drop explicit type arguments from PetscNew() and PetscNewLog()git grep -l 'PetscNew\(Log\)\?(' -- $1 | xargs perl -pi -e 's@PetscNew\([^,;()]+ *, *@PetscNew(@;s@PetscNewLog\(([^,;()]+) *,[^,;()]+, *@PetscNewLog($1,@'
Change all PETSC_EXTERN_C to PETSC_EXTERNHg-commit: 8d2ebbb193fb583bccc64015e35640c4e08c3426
completed removing unneeded EXTERN_C_BEGIN/END from Mat directories and converting to PETSC_EXTERN_C for constructorstested with and without dynamic with and without C++Hg-commit: 7d27d7f4d9ea3bfe
completed removing unneeded EXTERN_C_BEGIN/END from Mat directories and converting to PETSC_EXTERN_C for constructorstested with and without dynamic with and without C++Hg-commit: 7d27d7f4d9ea3bfe6616fafdfb32d046b5db53a1
added PetscObjectComm() and used it to replace (((PetscObject)obj)->comm)Hg-commit: 3da37c458124ad48ae939f4e9823e4430ee0b8be
removed PETSC_NULL from C and Fortran (except declaration in C for backward compatibility). Kept PETSC_NULL_xxx for FortranFixed a few bugs where PETSC_NULL had been used incorrectly.Hg-commit: 05
removed PETSC_NULL from C and Fortran (except declaration in C for backward compatibility). Kept PETSC_NULL_xxx for FortranFixed a few bugs where PETSC_NULL had been used incorrectly.Hg-commit: 054705a517d7f4388a8a084415d7478cbe95dff4
Uncrustified src/ksp/pc/*Hg-commit: b80b33e3b1d8943a898b18384bc7b2c1a3103a32
XXXView() methods should ignore unknown viewers, not error outHg-commit: e5c2cada7868386cc4981ab2a54cf541ca387f4b
removed trailing spaces from all filesHg-commit: 1cfa55059afe46c5145e0e830cd797b97216abfb
reemove OBJSC and OBJSF from invididual makefiles and auto-define in conf/variablesHg-commit: 2f01c17f3c19dc4b89aaf306cfd60a12312c270d
removed trailing blanks from source codeadded rule rmtrailingblanks accessible via make ACTION=remtrailingblanks treeHg-commit: 6e3652165d48aa5f3e94dd66bf607adea6fac27a
PetscTypeCompare -> PetscObjectTypeCompareHg-commit: 3fc8f665421ddb862bf4d1ba95505378246340be
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