aij - OpenGrok history log for /petsc/src/mat/impls/aij

Revision	Date	Author	Comments (<<< Hide modified files) (Show modified files >>>)
152b3e56	08-Mar-2021	Junchao Zhang <jczhang@mcs.anl.gov>	Add template VecGetKokkosView /petsc/include/petsc/private/vecimpl_kokkos.hpp /petsc/include/petscvec_kokkos.hpp seq/kokkos/aijkok.kokkos.cxx seq/kokkos/aijkokkosimpl.hpp /petsc/src/vec/vec/impls/mpi/kokkos/mpikok.kokkos.cxx /petsc/src/vec/vec/impls/seq/kokkos/veckok.kokkos.cxx /petsc/src/vec/vec/impls/seq/kokkos/veckokkosimpl.hpp
1a2c6b5c	10-Nov-2020	Junchao Zhang <jczhang@mcs.anl.gov>	Rename -mat_cusparse_transgen to -mat_form_explicit_transpose /petsc/config/BuildSystem/config/base.py /petsc/config/BuildSystem/config/compile/HIP.py /petsc/config/BuildSystem/config/compilerFlags.py /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/compilersFortran.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/PTScotch.py /petsc/config/BuildSystem/config/packages/cuda.py /petsc/config/BuildSystem/config/packages/hip.py /petsc/config/BuildSystem/config/packages/kokkos-kernels.py /petsc/config/BuildSystem/config/packages/kokkos.py /petsc/config/BuildSystem/config/packages/slepc.py /petsc/config/BuildSystem/config/packages/valgrind.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/PETSc/Configure.py /petsc/config/examples/arch-ci-freebsd-cxx-cmplx-pkgs-dbg.py /petsc/config/examples/arch-ci-linux-64idx-i8.py /petsc/config/examples/arch-ci-linux-clang-avx.py /petsc/config/examples/arch-ci-linux-cuda11-complex.py /petsc/config/examples/arch-ci-linux-gcc-complex-opt-32bit.py /petsc/config/examples/arch-ci-linux-hip-double.py /petsc/config/examples/arch-ci-linux-opt-cxx-quad.py /petsc/config/examples/arch-ci-mswin-intel-cxx-cmplx.py /petsc/config/examples/arch-ci-opensolaris-pkgs-opt.py /petsc/config/examples/arch-ci-osx-cxx-cmplx-pkgs-dbg.py /petsc/config/examples/arch-olcf-frontier-hip-beta.py /petsc/gmakefile /petsc/gmakefile.test /petsc/include/petsc/finclude/petscsys.h /petsc/include/petsc/private/matimpl.h /petsc/include/petscmat.h /petsc/include/petscsf.h /petsc/lib/petsc/bin/maint/builddist /petsc/lib/petsc/bin/maint/createpatch /petsc/lib/petsc/bin/maint/generatefortranstubs.py /petsc/lib/petsc/bin/maint/rebuildtar /petsc/lib/petsc/bin/maint/xclude /petsc/lib/petsc/conf/rules /petsc/lib/petsc/conf/test /petsc/makefile /petsc/src/dm/f90-mod/petscdm.h90 /petsc/src/dm/f90-mod/petscdmcomposite.h90 /petsc/src/dm/f90-mod/petscdmda.h90 /petsc/src/dm/f90-mod/petscdmdamod.F90 /petsc/src/dm/f90-mod/petscdmlabel.h90 /petsc/src/dm/f90-mod/petscdmmod.F90 /petsc/src/dm/f90-mod/petscdmplex.h90 /petsc/src/dm/f90-mod/petscdmplexmod.F90 /petsc/src/dm/f90-mod/petscdmswarm.h90 /petsc/src/dm/f90-mod/petscdt.h90 /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/plex/plexcreate.c /petsc/src/docs/tex/petsc.bib /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/f90-mod/petscksp.h90 /petsc/src/ksp/f90-mod/petsckspdefmod.F90 /petsc/src/ksp/f90-mod/petsckspmod.F90 /petsc/src/ksp/f90-mod/petscpc.h90 /petsc/src/ksp/f90-mod/petscpcmod.F90 /petsc/src/ksp/ksp/tests/output/ex11_2_test_fs-0_fc_pc_fieldsplit_off_diag_use_amat-0_fc_pc_fieldsplit_diag_use_amat-0.out /petsc/src/ksp/ksp/tests/output/ex11_2_test_fs-0_fc_pc_fieldsplit_off_diag_use_amat-0_fc_pc_fieldsplit_diag_use_amat-1.out /petsc/src/ksp/ksp/tests/output/ex11_2_test_fs-0_fc_pc_fieldsplit_off_diag_use_amat-1_fc_pc_fieldsplit_diag_use_amat-0.out /petsc/src/ksp/ksp/tests/output/ex11_2_test_fs-0_fc_pc_fieldsplit_off_diag_use_amat-1_fc_pc_fieldsplit_diag_use_amat-1.out /petsc/src/ksp/ksp/tests/output/ex11_2_test_fs-1_fc_pc_fieldsplit_off_diag_use_amat-0_fc_pc_fieldsplit_diag_use_amat-0.out /petsc/src/ksp/ksp/tests/output/ex11_2_test_fs-1_fc_pc_fieldsplit_off_diag_use_amat-0_fc_pc_fieldsplit_diag_use_amat-1.out /petsc/src/ksp/ksp/tests/output/ex11_2_test_fs-1_fc_pc_fieldsplit_off_diag_use_amat-1_fc_pc_fieldsplit_diag_use_amat-0.out /petsc/src/ksp/ksp/tests/output/ex11_2_test_fs-1_fc_pc_fieldsplit_off_diag_use_amat-1_fc_pc_fieldsplit_diag_use_amat-1.out /petsc/src/ksp/ksp/tests/output/ex28_2.out /petsc/src/ksp/ksp/tutorials/ex44f.F90 /petsc/src/ksp/ksp/tutorials/output/ex43_5.out /petsc/src/ksp/ksp/tutorials/output/ex43_6.out /petsc/src/ksp/ksp/tutorials/output/ex71_bddc_elast_3lev_hpddm.out /petsc/src/ksp/ksp/tutorials/output/ex71_bddc_elast_3lev_hpddm_baij.out /petsc/src/ksp/ksp/tutorials/output/ex71_bddc_elast_both_approx.out /petsc/src/ksp/ksp/tutorials/output/ex71_bddc_elast_deluxe_layers_adapt_cuda_approx_matis_localmat_type-seqaij.out /petsc/src/ksp/ksp/tutorials/output/ex71_bddc_elast_deluxe_layers_adapt_cuda_approx_matis_localmat_type-seqaijcusparse.out /petsc/src/ksp/ksp/tutorials/output/ex71_bddc_elast_dir_approx.out /petsc/src/ksp/ksp/tutorials/output/ex71_bddc_elast_neu_approx.out /petsc/src/ksp/ksp/tutorials/output/ex72_mpiaijcrl.out /petsc/src/ksp/ksp/tutorials/output/ex72_mpiaijperm.out /petsc/src/ksp/ksp/tutorials/output/ex72_mpicrl.out /petsc/src/ksp/ksp/tutorials/output/ex7_gamg_cuda_nsize-1.out /petsc/src/ksp/ksp/tutorials/output/ex7_gamg_cuda_nsize-2.out /petsc/src/ksp/ksp/tutorials/output/ex7_gamg_kokkos_nsize-1.out /petsc/src/ksp/ksp/tutorials/output/ex7_gamg_kokkos_nsize-2.out /petsc/src/ksp/pc/impls/bjacobi/bjacobi.c /petsc/src/ksp/pc/impls/gamg/gamg.c /petsc/src/ksp/pc/impls/hypre/hypre.c /petsc/src/mat/f90-mod/petscmat.h /petsc/src/mat/f90-mod/petscmat.h90 /petsc/src/mat/f90-mod/petscmatmod.F90 mpi/mpiaij.c mpi/mpicusparse/mpiaijcusparse.cu seq/aij.c seq/seqcusparse/aijcusparse.cu seq/seqcusparse/cusparsematimpl.h /petsc/src/mat/impls/dense/seq/dense.c /petsc/src/mat/impls/normal/normm.c /petsc/src/mat/interface/dlregismat.c /petsc/src/mat/tests/ex62.c /petsc/src/mat/tests/ex69.c /petsc/src/mat/utils/gcreate.c /petsc/src/snes/f90-mod/petscsnes.h90 /petsc/src/snes/f90-mod/petscsnesmod.F90 /petsc/src/snes/tests/ex12f.F /petsc/src/snes/tests/ex13.c /petsc/src/snes/tutorials/output/ex12_quad_hpddm_reuse.out /petsc/src/snes/tutorials/output/ex12_quad_hpddm_reuse_baij.out /petsc/src/snes/tutorials/output/ex12_quad_hpddm_reuse_threshold.out /petsc/src/snes/tutorials/output/ex12_quad_hpddm_reuse_threshold_baij.out /petsc/src/snes/tutorials/output/ex12_tri_hpddm_reuse.out /petsc/src/snes/tutorials/output/ex12_tri_hpddm_reuse_baij.out /petsc/src/snes/tutorials/output/ex12_tri_parmetis_hpddm.out /petsc/src/snes/tutorials/output/ex12_tri_parmetis_hpddm_baij.out /petsc/src/snes/tutorials/output/ex19_10.out /petsc/src/snes/tutorials/output/ex19_13.out /petsc/src/snes/tutorials/output/ex19_7.out /petsc/src/snes/tutorials/output/ex19_9.out /petsc/src/snes/tutorials/output/ex19_bcgsl.out /petsc/src/snes/tutorials/output/ex19_ibcgs.out /petsc/src/snes/tutorials/output/ex19_mpibaijmkl.out /petsc/src/snes/tutorials/output/ex19_ngmres_fas_ms.out /petsc/src/snes/tutorials/output/ex19_tut_1.out /petsc/src/snes/tutorials/output/ex48_4.out /petsc/src/snes/tutorials/output/ex5_5.out /petsc/src/snes/tutorials/output/ex63_quad_q2q1_full_P2.out /petsc/src/snes/tutorials/output/ex63_quad_q2q1_full_P5.out /petsc/src/snes/utils/dmplexsnes.c /petsc/src/sys/error/adebug.c /petsc/src/sys/error/errabort.c /petsc/src/sys/error/errstop.c /petsc/src/sys/error/errtrace.c /petsc/src/sys/error/pstack.c /petsc/src/sys/f90-mod/petscsys.h /petsc/src/sys/f90-mod/petscsys.h90 /petsc/src/sys/f90-mod/petscsysmod.F90 /petsc/src/sys/f90-mod/petscviewer.h90 /petsc/src/sys/logging/tutorials/ex1f.F90 /petsc/src/sys/objects/optionsyaml.c /petsc/src/sys/tests/ex38f.F90 /petsc/src/sys/tests/ex47-multidoc.yaml /petsc/src/sys/tests/ex47.c /petsc/src/sys/tests/output/ex47_3_multidoc.out /petsc/src/sys/tutorials/ex16f.F90 /petsc/src/sys/tutorials/ex1f.F90 /petsc/src/sys/tutorials/ex2f.F90 /petsc/src/sys/tutorials/ex4f.F /petsc/src/sys/tutorials/ex4f90.F90 /petsc/src/tao/bound/tutorials/output/plate2_3.out /petsc/src/tao/bound/tutorials/output/plate2_4.out /petsc/src/tao/f90-mod/petsctaomod.F90 /petsc/src/tao/leastsquares/tutorials/chwirut2f.F90 /petsc/src/tao/leastsquares/tutorials/chwirut2f.h /petsc/src/tao/unconstrained/tutorials/output/minsurf2_2.out /petsc/src/ts/f90-mod/petsctsmod.F90 /petsc/src/ts/tests/ex26.c /petsc/src/ts/tests/output/ex21_2_bdf_ngmres_fas_ms.out /petsc/src/ts/tests/output/ex21_2_bdf_ngmres_fas_ngs.out /petsc/src/ts/tutorials/ex77.c /petsc/src/vec/f90-mod/petscis.h90 /petsc/src/vec/f90-mod/petscvec.h90 /petsc/src/vec/f90-mod/petscvecmod.F90 /petsc/src/vec/is/sf/makefile /petsc/src/vec/is/sf/tests/ex16.c /petsc/src/vec/is/sf/tests/makefile /petsc/src/vec/is/sf/tests/output/ex16_0.out /petsc/src/vec/is/sf/tests/output/ex16_1.out /petsc/src/vec/is/sf/tests/output/ex16_2.out /petsc/src/vec/is/sf/tutorials/ex1f.F90 /petsc/src/vec/is/sf/tutorials/makefile /petsc/src/vec/is/sf/utils/sfutils.c /petsc/src/vec/vec/tests/ex32f.F /petsc/src/vec/vec/tests/makefile
d8132aca	17-Mar-2021	Stefano Zampini <stefano.zampini@gmail.com>	MATSEQAIJCUSPARSE: if MatSetFromOptions is not called these defaults are never set! /petsc/.gitlab-ci.yml /petsc/config/BuildSystem/config/compilerFlags.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/packages/SuiteSparse.py /petsc/config/BuildSystem/config/packages/cuda.py /petsc/config/BuildSystem/config/packages/hpddm.py /petsc/config/BuildSystem/config/packages/mkl_sparse.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/BuildSystem/config/types.py /petsc/config/examples/arch-ci-linux-gcc-complex-opt-32bit.py /petsc/include/petsc/private/dmnetworkimpl.h /petsc/include/petsc/private/kspimpl.h /petsc/include/petsc/private/pcmgimpl.h /petsc/include/petscdm.h /petsc/include/petscdmshell.h /petsc/include/petscksp.h /petsc/include/petscmat.h /petsc/include/petscmath.h /petsc/include/petscpc.h /petsc/include/petscsnes.h /petsc/include/petscts.h /petsc/lib/petsc/conf/rules /petsc/src/binding/petsc4py/src/PETSc/Log.pyx /petsc/src/dm/impls/network/network.c /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/plex/plexcgns.c /petsc/src/dm/impls/plex/plexcreate.c /petsc/src/dm/impls/plex/plexfem.c /petsc/src/dm/impls/plex/plexgmsh.c /petsc/src/dm/impls/plex/tests/output/ex1_cgns_0.out /petsc/src/dm/impls/plex/tutorials/ex2.c /petsc/src/dm/impls/plex/tutorials/output/ex2_0.out /petsc/src/dm/impls/shell/dmshell.c /petsc/src/dm/impls/stag/stag3d.c /petsc/src/dm/impls/swarm/swarm.c /petsc/src/dm/interface/dm.c /petsc/src/docs/manualpages-sec/header_SF /petsc/src/docs/sphinx_docs/ext/html5_petsc.py /petsc/src/docs/sphinx_docs/guides/meshing/guide_to_subsurface.rst /petsc/src/docs/sphinx_docs/manual/dmplex.rst /petsc/src/docs/sphinx_docs/overview/features_documentation.rst /petsc/src/docs/sphinx_docs/overview/nutshell.rst /petsc/src/docs/tex/petscapp.bib /petsc/src/docs/website/documentation/changes/314.html /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/ksp/impls/hpddm/hpddm.cxx /petsc/src/ksp/ksp/interface/itcl.c /petsc/src/ksp/ksp/interface/itcreate.c /petsc/src/ksp/ksp/interface/iterativ.c /petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/ksp/ksp/tests/ex26.c /petsc/src/ksp/ksp/tests/makefile /petsc/src/ksp/ksp/tests/output/ex26_1.out /petsc/src/ksp/ksp/tests/output/ex26_2.out /petsc/src/ksp/ksp/tests/output/ex26_cycles_pc_mg_type-additive.out /petsc/src/ksp/ksp/tests/output/ex26_cycles_pc_mg_type-full.out /petsc/src/ksp/ksp/tests/output/ex26_cycles_pc_mg_type-kaskade.out /petsc/src/ksp/ksp/tests/output/ex26_cycles_pc_mg_type-multiplicative.out /petsc/src/ksp/ksp/tests/output/ex26_matcycles_hpddm_ilu_ksp_matsolve_batch_size-4.out /petsc/src/ksp/ksp/tests/output/ex26_matcycles_hpddm_ilu_ksp_matsolve_batch_size-7.out /petsc/src/ksp/ksp/tests/output/ex26_matcycles_hpddm_mg_pc_mg_type-additive_ksp_matsolve_batch_size-4.out 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/petsc/src/mat/impls/baij/mpi/mpibaij.c /petsc/src/mat/impls/baij/seq/baij.c /petsc/src/mat/impls/baij/seq/baij.h /petsc/src/mat/impls/baij/seq/baij2.c /petsc/src/mat/impls/dense/seq/dense.c /petsc/src/mat/impls/dense/seq/dense.h /petsc/src/mat/impls/maij/maij.c /petsc/src/mat/impls/scalapack/matscalapack.c /petsc/src/mat/interface/dlregismat.c /petsc/src/mat/interface/matrix.c /petsc/src/mat/tests/ex1.c /petsc/src/mat/tests/ex215.c /petsc/src/mat/tests/ex238.c /petsc/src/mat/tests/ex70.c /petsc/src/mat/tests/output/ex238_1.out /petsc/src/snes/impls/fas/fas.c /petsc/src/snes/impls/fas/fasfunc.c /petsc/src/snes/impls/fas/fasimpls.h /petsc/src/snes/impls/vi/rs/virs.c /petsc/src/snes/interface/snes.c /petsc/src/snes/tests/ex2.c /petsc/src/snes/tutorials/ex13.c /petsc/src/snes/tutorials/ex63.c /petsc/src/snes/tutorials/output/ex13_2d_p1_fas_full.out /petsc/src/snes/tutorials/output/ex13_2d_p1_fas_full_homogeneous.out /petsc/src/snes/utils/dmplexsnes.c /petsc/src/sys/memory/mtr.c /petsc/src/ts/event/tsevent.c /petsc/src/ts/impls/implicit/sundials/makefile /petsc/src/ts/impls/implicit/sundials/sundials.h /petsc/src/ts/interface/tsregall.c /petsc/src/ts/tests/ex3.c /petsc/src/ts/tutorials/advection-diffusion-reaction/ex4.c /petsc/src/ts/tutorials/advection-diffusion-reaction/ex5.c /petsc/src/ts/tutorials/advection-diffusion-reaction/ex5adj.c /petsc/src/ts/tutorials/advection-diffusion-reaction/ex5opt_ic.c /petsc/src/ts/tutorials/autodiff/adr_ex5adj.cxx /petsc/src/ts/tutorials/autodiff/adr_ex5adj_mf.cxx /petsc/src/ts/tutorials/ex20td.c /petsc/src/ts/tutorials/ex4.c /petsc/src/ts/tutorials/ex77.c /petsc/src/ts/tutorials/makefile /petsc/src/ts/tutorials/output/ex77_2d_tri_p2_p1_p1_exit.out /petsc/src/ts/tutorials/power_grid/makefile
07a4507b	16-Mar-2021	Barry Smith <bsmith@mcs.anl.gov>	Revert useorder flag for MatSolverType umfpack since it is much much slower using PETSc ordering Commit-type: optimization, bug-fix /spend 5m Reported-by: Patrick Sanan Thanks-to: Dave May /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/SuiteSparse.py /petsc/config/BuildSystem/config/packages/cuda.py /petsc/config/BuildSystem/config/packages/hpddm.py /petsc/config/BuildSystem/config/packages/mkl_sparse.py /petsc/include/petscversion.h /petsc/src/dm/impls/plex/plexcreate.c /petsc/src/dm/impls/stag/stag3d.c /petsc/src/docs/website/download/index.html /petsc/src/ksp/pc/impls/asm/asm.c /petsc/src/ksp/pc/impls/shell/shellpc.c seq/umfpack/umfpack.c /petsc/src/mat/impls/scalapack/matscalapack.c /petsc/src/mat/tests/ex237.c /petsc/src/sys/objects/pinit.c /petsc/src/vec/vec/tests/makefile
71438e86	06-Jan-2021	Junchao Zhang <jczhang@mcs.anl.gov>	Add SF NVSHMEM support /petsc/config/BuildSystem/config/packages/NVSHMEM.py /petsc/include/petsc/private/cudavecimpl.h /petsc/include/petsc/private/sfimpl.h /petsc/include/petscsys.h /petsc/include/petscsystypes.h /petsc/src/docs/website/documentation/changes/dev.html mpi/mpicusparse/mpiaijcusparse.cu /petsc/src/sys/objects/init.c /petsc/src/sys/objects/pinit.c /petsc/src/vec/is/sf/impls/basic/allgather/sfallgather.c /petsc/src/vec/is/sf/impls/basic/allgatherv/sfallgatherv.c /petsc/src/vec/is/sf/impls/basic/alltoall/sfalltoall.c /petsc/src/vec/is/sf/impls/basic/cuda/sfcuda.cu /petsc/src/vec/is/sf/impls/basic/gather/sfgather.c /petsc/src/vec/is/sf/impls/basic/gatherv/sfgatherv.c /petsc/src/vec/is/sf/impls/basic/hip/sfhip.hip.cpp /petsc/src/vec/is/sf/impls/basic/kokkos/sfkok.kokkos.cxx /petsc/src/vec/is/sf/impls/basic/makefile /petsc/src/vec/is/sf/impls/basic/neighbor/sfneighbor.c /petsc/src/vec/is/sf/impls/basic/nvshmem/makefile /petsc/src/vec/is/sf/impls/basic/nvshmem/sfnvshmem.cu /petsc/src/vec/is/sf/impls/basic/sfbasic.c /petsc/src/vec/is/sf/impls/basic/sfbasic.h /petsc/src/vec/is/sf/impls/basic/sfmpi.c /petsc/src/vec/is/sf/impls/basic/sfpack.c /petsc/src/vec/is/sf/impls/basic/sfpack.h /petsc/src/vec/is/sf/interface/sf.c /petsc/src/vec/vec/impls/mpi/pvecimpl.h /petsc/src/vec/vec/impls/seq/seqcuda/veccuda.c /petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu
a0e72f99	07-Jan-2021	Junchao Zhang <jczhang@mcs.anl.gov>	Add non-null PetscDefault{Cuda,Hip}Stream /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/examples/arch-alcfci-theta-intel-opt.py /petsc/config/examples/arch-cray-xc40-knl-opt.py /petsc/include/petsccublas.h /petsc/include/petsccxxcomplexfix.h /petsc/include/petschipblas.h /petsc/include/petscmath.h /petsc/include/petscsys.h /petsc/include/petscsystypes.h /petsc/lib/petsc/conf/rules /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/ksp/tutorials/ex81.c mpi/mpicusparse/mpiaijcusparse.cu seq/seqcusparse/aijcusparse.cu /petsc/src/mat/impls/transpose/htransm.c /petsc/src/mat/impls/transpose/transm.c /petsc/src/sys/f90-src/f90_cwrap.c /petsc/src/sys/objects/cuda/handle.c /petsc/src/sys/objects/cupminit.inc /petsc/src/sys/objects/ftn-custom/zstart.c /petsc/src/sys/objects/init.c /petsc/src/sys/objects/pinit.c /petsc/src/sys/objects/ptype.c /petsc/src/vec/vec/impls/seq/seqcuda/veccuda.c /petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu
8f7e8f9d	07-Mar-2021	Mark Adams <524115-markadams4@users.noreply.gitlab.com>	adding LU factorization to Kokkos --amend wip wip wip fixed Id remove prints wip fixed Nf attach, fixed LU flops, fixed solver bug wip wip wip wip fixing kokkos LU Apply 1 suggestion(s) adding LU factorization to Kokkos --amend wip wip wip fixed Id remove prints wip fixed Nf attach, fixed LU flops, fixed solver bug wip wip wip wip fixing kokkos LU Apply 1 suggestion(s) to 1 file(s) Apply 2 suggestion(s) to 1 file(s) format dgemm V2 working debugging debugging debugging working in serial wip wip:fixed 2D Kokkos LU fix 3d bug in GPU assembly format format format added check remove check show more ... /petsc/config/BuildSystem/config/compilersFortran.py /petsc/include/petscmat.h /petsc/lib/petsc/bin/configureTAS.py /petsc/lib/petsc/bin/petsc_tas_analysis.py /petsc/lib/petsc/bin/tasClasses.py seq/kokkos/aijkok.kokkos.cxx seq/kokkos/aijkokkosimpl.hpp /petsc/src/ts/utils/dmplexlandau/cuda/landaucu.cu /petsc/src/ts/utils/dmplexlandau/kokkos/landau.kokkos.cxx /petsc/src/ts/utils/dmplexlandau/plexland.c
91d58987	03-Mar-2021	Satish Balay <balay@mcs.anl.gov>	Merge branch 'release' into main /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/include/petscerror.h /petsc/include/petscversion.h /petsc/lib/petsc/conf/rules /petsc/src/dm/impls/da/grvtk.c /petsc/src/docs/website/download/index.html /petsc/src/ksp/ksp/impls/fcg/pipefcg/pipefcg.c /petsc/src/ksp/ksp/impls/gcr/pipegcr/pipegcr.c /petsc/src/ksp/ksp/impls/gmres/pipefgmres/pipefgmres.c mpi/mpimatmatmult.c /petsc/src/mat/impls/baij/seq/baij.c /petsc/src/mat/impls/dense/seq/dense.c /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c /petsc/src/mat/interface/matrix.c /petsc/src/mat/tests/ex151.c /petsc/src/mat/tests/ex237.c /petsc/src/mat/tests/output/ex151_dense.out /petsc/src/sys/objects/pinit.c
7ab9467e	02-Mar-2021	Satish Balay <balay@mcs.anl.gov>	Merge branch 'jczhang/sf-change-api' into 'main' Change some SF APIs mentioned in the ECP paper See merge request petsc/petsc!3659 /petsc/config/BuildSystem/config/packages/MPI.py /petsc/include/petsc/mpiuni/mpif.h /petsc/include/petsc/private/sfimpl.h /petsc/include/petscsf.h /petsc/include/petscsystypes.h /petsc/src/binding/petsc4py/src/PETSc/SF.pyx /petsc/src/binding/petsc4py/src/PETSc/petscsf.pxi /petsc/src/dm/impls/forest/p4est/pforest.c /petsc/src/dm/impls/network/network.c /petsc/src/dm/impls/patch/patch.c /petsc/src/dm/impls/plex/plexcreate.c /petsc/src/dm/impls/plex/plexdistribute.c /petsc/src/dm/impls/plex/plexinterpolate.c /petsc/src/dm/impls/plex/plexmed.c /petsc/src/dm/impls/plex/plexnatural.c /petsc/src/dm/impls/plex/plexorient.c /petsc/src/dm/impls/plex/plexpartition.c /petsc/src/dm/impls/plex/plexpreallocate.c /petsc/src/dm/impls/plex/plexrefine.c /petsc/src/dm/impls/plex/plexsubmesh.c /petsc/src/dm/impls/plex/plextree.c /petsc/src/dm/interface/dm.c /petsc/src/dm/label/dmlabel.c /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/ksp/impls/fetidp/fetidp.c /petsc/src/ksp/pc/impls/bddc/bddcprivate.c /petsc/src/ksp/pc/impls/gamg/classical.c /petsc/src/ksp/pc/impls/patch/pcpatch.c /petsc/src/mat/coarsen/impls/mis/mis.c /petsc/src/mat/color/impls/greedy/greedy.c /petsc/src/mat/color/impls/jp/jp.c /petsc/src/mat/impls/adj/mpi/mpiadj.c mpi/mpiaij.c mpi/mpiov.c mpi/mpiptap.c /petsc/src/mat/impls/dense/mpi/mpidense.c /petsc/src/mat/impls/hara/mathara.cu /petsc/src/mat/impls/is/matis.c /petsc/src/mat/impls/nest/matnest.c /petsc/src/mat/partition/impls/hierarchical/hierarchical.c /petsc/src/mat/tests/ex66.c /petsc/src/mat/utils/overlapsplit.c /petsc/src/snes/impls/patch/snespatch.c /petsc/src/ts/tutorials/ex11.c /petsc/src/ts/tutorials/ex11_sa.c /petsc/src/vec/f90-mod/petscvec.h90 /petsc/src/vec/is/is/interface/index.c /petsc/src/vec/is/is/utils/iscoloring.c /petsc/src/vec/is/section/interface/section.c /petsc/src/vec/is/sf/impls/basic/allgather/sfallgather.c /petsc/src/vec/is/sf/impls/basic/allgatherv/sfallgatherv.c /petsc/src/vec/is/sf/impls/basic/alltoall/sfalltoall.c /petsc/src/vec/is/sf/impls/basic/cuda/sfcuda.cu /petsc/src/vec/is/sf/impls/basic/gather/sfgather.c /petsc/src/vec/is/sf/impls/basic/gatherv/sfgatherv.c /petsc/src/vec/is/sf/impls/basic/neighbor/sfneighbor.c /petsc/src/vec/is/sf/impls/basic/sfbasic.c /petsc/src/vec/is/sf/impls/basic/sfbasic.h /petsc/src/vec/is/sf/impls/basic/sfpack.c /petsc/src/vec/is/sf/impls/window/sfwindow.c /petsc/src/vec/is/sf/interface/dlregissf.c /petsc/src/vec/is/sf/interface/ftn-custom/zsf.c /petsc/src/vec/is/sf/interface/sf.c /petsc/src/vec/is/sf/interface/vscat.c /petsc/src/vec/is/sf/tests/ex1.c /petsc/src/vec/is/sf/tests/ex3.c /petsc/src/vec/is/sf/tests/ex4.c /petsc/src/vec/is/sf/tests/ex5.c /petsc/src/vec/is/sf/tutorials/ex1.c /petsc/src/vec/is/sf/tutorials/ex1f.F90 /petsc/src/vec/is/sf/tutorials/ex2.c /petsc/src/vec/is/sf/tutorials/ex3.c /petsc/src/vec/is/sf/utils/sfutils.c /petsc/src/vec/is/utils/isltog.c
ad227fea	27-Feb-2021	Junchao Zhang <jczhang@mcs.anl.gov>	SF: add an MPI_Op argument to SFBcast /petsc/include/petsc/private/sfimpl.h /petsc/include/petscsf.h /petsc/include/petscsystypes.h /petsc/src/binding/petsc4py/src/PETSc/SF.pyx /petsc/src/binding/petsc4py/src/PETSc/petscsf.pxi /petsc/src/dm/impls/forest/p4est/pforest.c /petsc/src/dm/impls/network/network.c /petsc/src/dm/impls/patch/patch.c /petsc/src/dm/impls/plex/plexcreate.c /petsc/src/dm/impls/plex/plexdistribute.c /petsc/src/dm/impls/plex/plexinterpolate.c /petsc/src/dm/impls/plex/plexmed.c /petsc/src/dm/impls/plex/plexnatural.c /petsc/src/dm/impls/plex/plexorient.c /petsc/src/dm/impls/plex/plexpartition.c /petsc/src/dm/impls/plex/plexpreallocate.c /petsc/src/dm/impls/plex/plexrefine.c /petsc/src/dm/impls/plex/plexsubmesh.c /petsc/src/dm/impls/plex/plextree.c /petsc/src/dm/interface/dm.c /petsc/src/dm/label/dmlabel.c /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/ksp/impls/fetidp/fetidp.c /petsc/src/ksp/pc/impls/bddc/bddcprivate.c /petsc/src/ksp/pc/impls/gamg/classical.c /petsc/src/ksp/pc/impls/patch/pcpatch.c /petsc/src/mat/coarsen/impls/mis/mis.c /petsc/src/mat/color/impls/greedy/greedy.c /petsc/src/mat/color/impls/jp/jp.c /petsc/src/mat/impls/adj/mpi/mpiadj.c mpi/mpiaij.c mpi/mpiov.c /petsc/src/mat/impls/dense/mpi/mpidense.c /petsc/src/mat/impls/hara/mathara.cu /petsc/src/mat/impls/is/matis.c /petsc/src/mat/impls/nest/matnest.c /petsc/src/mat/tests/ex66.c /petsc/src/snes/impls/patch/snespatch.c /petsc/src/ts/tutorials/ex11.c /petsc/src/ts/tutorials/ex11_sa.c /petsc/src/vec/f90-mod/petscvec.h90 /petsc/src/vec/is/is/interface/index.c /petsc/src/vec/is/is/utils/iscoloring.c /petsc/src/vec/is/section/interface/section.c /petsc/src/vec/is/sf/impls/basic/allgather/sfallgather.c /petsc/src/vec/is/sf/impls/basic/allgatherv/sfallgatherv.c /petsc/src/vec/is/sf/impls/basic/alltoall/sfalltoall.c /petsc/src/vec/is/sf/impls/basic/gather/sfgather.c /petsc/src/vec/is/sf/impls/basic/gatherv/sfgatherv.c /petsc/src/vec/is/sf/impls/basic/neighbor/sfneighbor.c /petsc/src/vec/is/sf/impls/basic/sfbasic.c /petsc/src/vec/is/sf/impls/basic/sfbasic.h /petsc/src/vec/is/sf/impls/window/sfwindow.c /petsc/src/vec/is/sf/interface/dlregissf.c /petsc/src/vec/is/sf/interface/ftn-custom/zsf.c /petsc/src/vec/is/sf/interface/sf.c /petsc/src/vec/is/sf/interface/vscat.c /petsc/src/vec/is/sf/tests/ex1.c /petsc/src/vec/is/sf/tests/ex3.c /petsc/src/vec/is/sf/tests/ex4.c /petsc/src/vec/is/sf/tests/ex5.c /petsc/src/vec/is/sf/tutorials/ex1.c /petsc/src/vec/is/sf/tutorials/ex1f.F90 /petsc/src/vec/is/sf/tutorials/ex2.c /petsc/src/vec/is/sf/tutorials/ex3.c /petsc/src/vec/is/sf/utils/sfutils.c /petsc/src/vec/is/utils/isltog.c
d9fd370b	02-Mar-2021	Satish Balay <balay@mcs.anl.gov>	Merge branch 'jolivet/feature-nest-tile' into 'main' Tiles in MatNest See merge request petsc/petsc!3630 /petsc/config/BuildSystem/config/packages/MFEM.py /petsc/config/BuildSystem/config/packages/hpddm.py /petsc/config/BuildSystem/config/packages/magma.py /petsc/config/BuildSystem/config/packages/slepc.py /petsc/include/petsc/private/matimpl.h /petsc/include/petsc/private/petschpddm.h /petsc/include/petscpc.h /petsc/include/petscvec.h /petsc/src/dm/impls/patch/tests/output/ex1_1.out /petsc/src/dm/impls/plex/tests/output/ex12_1.out /petsc/src/dm/impls/plex/tests/output/ex12_10.out /petsc/src/dm/impls/plex/tests/output/ex12_11.out /petsc/src/dm/impls/plex/tests/output/ex12_12.out /petsc/src/dm/impls/plex/tests/output/ex12_13.out /petsc/src/dm/impls/plex/tests/output/ex12_14.out /petsc/src/dm/impls/plex/tests/output/ex12_15.out /petsc/src/dm/impls/plex/tests/output/ex12_16.out /petsc/src/dm/impls/plex/tests/output/ex12_17.out 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da7cbbe7	01-Mar-2021	Hong Zhang <hzhang@mcs.anl.gov>	bugfix for MatMatMultSymbolic_MPIAIJ_MPIDense() when Bbn1 = 2AmBN/nz = 0. Reported-by: Pierre Jolivet <pierre@joliv.et> Bb (column block size) cannot be zero; it leads to infinite loop in MatMatMul bugfix for MatMatMultSymbolic_MPIAIJ_MPIDense() when Bbn1 = 2AmBN/nz = 0. Reported-by: Pierre Jolivet <pierre@joliv.et> Bb (column block size) cannot be zero; it leads to infinite loop in MatMatMultNumeric_MPIAIJ_MPIDense() with n=0 show more ... /petsc/.gitlab-ci.yml /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/SuiteSparse.py /petsc/config/BuildSystem/config/packages/slepc.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/examples/arch-ci-freebsd-cxx-cmplx-64idx-dbg.py /petsc/config/examples/arch-ci-linux-pkgs-64idx.py /petsc/config/report_tests.py /petsc/config/testparse.py /petsc/gmakefile /petsc/gmakefile.test /petsc/include/petsc/private/petschpddm.h /petsc/include/petscksp.h /petsc/include/petscsys.h /petsc/include/petscversion.h /petsc/lib/petsc/bin/maint/check-ci-settings.sh /petsc/lib/petsc/bin/maint/check-merge-branch.sh /petsc/lib/petsc/bin/maint/gcov.py /petsc/src/dm/dt/fe/interface/ftn-custom/zfef.c /petsc/src/dm/dt/fv/interface/ftn-custom/zfvf.c /petsc/src/dm/dt/interface/ftn-custom/zdsf.c /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/plex/plexvtu.c /petsc/src/dm/interface/ftn-custom/zdmf.c /petsc/src/dm/partitioner/interface/ftn-custom/zpartitioner.c /petsc/src/docs/website/download/index.html /petsc/src/ksp/ksp/interface/ftn-custom/zitcreatef.c /petsc/src/ksp/pc/impls/bddc/bddc.c /petsc/src/ksp/pc/impls/hpddm/hpddm.cxx /petsc/src/ksp/pc/interface/ftn-custom/zpreconf.c /petsc/src/mat/coarsen/ftn-custom/zcoarsenf.c mpi/mpimatmatmult.c /petsc/src/mat/impls/baij/seq/baij.c /petsc/src/mat/impls/baij/seq/baij.h /petsc/src/mat/impls/baij/seq/baijfact81.c /petsc/src/mat/impls/sbaij/seq/sbaij.c /petsc/src/mat/interface/ftn-custom/zmatrixf.c /petsc/src/mat/partition/ftn-custom/zpartitionf.c /petsc/src/snes/interface/ftn-custom/zsnesf.c /petsc/src/sys/classes/draw/interface/ftn-custom/zdrawregf.c /petsc/src/sys/classes/random/interface/ftn-custom/zrandomf.c /petsc/src/sys/fileio/sysio.c /petsc/src/sys/objects/aoptions.c /petsc/src/sys/objects/ftn-custom/zoptionsf.c /petsc/src/sys/objects/options.c /petsc/src/sys/objects/prefix.c /petsc/src/tao/interface/ftn-custom/ztaosolverf.c /petsc/src/tao/linesearch/interface/ftn-custom/ztaolinesearchf.c /petsc/src/ts/interface/ftn-custom/ztsf.c /petsc/src/ts/interface/ts.c /petsc/src/ts/trajectory/impls/memory/trajmemory.c /petsc/src/ts/trajectory/interface/ftn-custom/ztrajf.c /petsc/src/ts/utils/dmlocalts.c /petsc/src/vec/is/ao/interface/ftn-custom/zaof.c /petsc/src/vec/is/is/interface/ftn-custom/zindexf.c /petsc/src/vec/is/is/utils/ftn-custom/ziscoloringf.c /petsc/src/vec/is/section/interface/ftn-custom/zsectionf.c /petsc/src/vec/is/sf/interface/ftn-custom/zsf.c /petsc/src/vec/is/utils/ftn-custom/zisltogf.c /petsc/src/vec/pf/interface/ftn-custom/zpff.c /petsc/src/vec/vec/impls/nest/vecnest.c /petsc/src/vec/vec/interface/ftn-custom/zvectorf.c
4e29119a	18-Feb-2021	Pierre Jolivet <pierre@joliv.et>	MatConvert(): specializations MPIDense <-> MPIAIJ mpi/mpiaij.c mpi/mpiaij.h seq/aij.c /petsc/src/mat/impls/dense/mpi/mpidense.c /petsc/src/mat/impls/dense/mpi/mpidense.h
f2e2784e	18-Feb-2021	Pierre Jolivet <pierre@joliv.et>	Short-circuit MatCreateMPIMatConcatenateSeqMat() /petsc/src/ksp/ksp/tutorials/ex79.c /petsc/src/ksp/pc/impls/hpddm/hpddm.cxx mpi/mpiaij.c /petsc/src/mat/impls/baij/mpi/mpibaij.c /petsc/src/mat/impls/dense/mpi/mpidense.c /petsc/src/mat/impls/nest/matnest.c
2726fb6d	23-Feb-2021	Pierre Jolivet <pierre@joliv.et>	Add MatConjugate_[MPI\|Seq][S]BAIJ() /petsc/config/BuildSystem/config/packages/MFEM.py /petsc/config/BuildSystem/config/packages/hpddm.py /petsc/config/BuildSystem/config/packages/magma.py /petsc/config/BuildSystem/config/packages/slepc.py /petsc/include/petsc/private/petschpddm.h /petsc/include/petscpc.h /petsc/src/dm/impls/patch/tests/output/ex1_1.out /petsc/src/dm/impls/plex/tests/output/ex12_1.out /petsc/src/dm/impls/plex/tests/output/ex12_10.out /petsc/src/dm/impls/plex/tests/output/ex12_11.out /petsc/src/dm/impls/plex/tests/output/ex12_12.out /petsc/src/dm/impls/plex/tests/output/ex12_13.out /petsc/src/dm/impls/plex/tests/output/ex12_14.out /petsc/src/dm/impls/plex/tests/output/ex12_15.out /petsc/src/dm/impls/plex/tests/output/ex12_16.out /petsc/src/dm/impls/plex/tests/output/ex12_17.out /petsc/src/dm/impls/plex/tests/output/ex12_2.out /petsc/src/dm/impls/plex/tests/output/ex12_3.out 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83df288d	27-Feb-2021	Junchao Zhang <jczhang@mcs.anl.gov>	Replace MPIU_REPLACE with MPI_REPLACE Since we believe all MPI implementations support MPI_REPLACE /petsc/config/BuildSystem/config/packages/MFEM.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/magma.py /petsc/include/petsc/mpiuni/mpif.h /petsc/include/petscsf.h /petsc/src/dm/impls/patch/tests/output/ex1_1.out /petsc/src/dm/impls/plex/tests/output/ex12_1.out /petsc/src/dm/impls/plex/tests/output/ex12_10.out /petsc/src/dm/impls/plex/tests/output/ex12_11.out /petsc/src/dm/impls/plex/tests/output/ex12_12.out /petsc/src/dm/impls/plex/tests/output/ex12_13.out /petsc/src/dm/impls/plex/tests/output/ex12_14.out /petsc/src/dm/impls/plex/tests/output/ex12_15.out /petsc/src/dm/impls/plex/tests/output/ex12_16.out /petsc/src/dm/impls/plex/tests/output/ex12_17.out /petsc/src/dm/impls/plex/tests/output/ex12_2.out /petsc/src/dm/impls/plex/tests/output/ex12_3.out 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a3d67537	01-Mar-2021	Pierre Jolivet <pierre@joliv.et>	MatSeqAIJMKL: warnings --with-scalar-type=complex seq/aijmkl/aijmkl.c
9dddd249	10-Feb-2021	Satish Balay <balay@mcs.anl.gov>	git: switch default branch from 'master' to 'main' /petsc/.travis.yml /petsc/CONTRIBUTING /petsc/config/BuildSystem/config/package.py /petsc/config/examples/arch-ci-freebsd-cxx-cmplx-64idx-dbg.py /petsc/config/examples/arch-ci-linux-pkgs-64idx.py /petsc/include/petsc/private/pcmgimpl.h /petsc/include/petscerror.h /petsc/include/petscsf.h /petsc/include/petscviewer.h /petsc/lib/petsc/bin/maint/builddist /petsc/lib/petsc/bin/maint/check-ci-settings.sh /petsc/lib/petsc/bin/maint/check-merge-branch.sh /petsc/lib/petsc/bin/maint/gcov.py /petsc/lib/petsc/bin/maint/lex.py /petsc/lib/petsc/conf/rules /petsc/makefile /petsc/setup.py /petsc/src/benchmarks/benchmarkBatch.py /petsc/src/dm/dt/dualspace/impls/lagrange/dspacelagrange.c /petsc/src/dm/dt/fe/impls/basic/febasic.c /petsc/src/dm/impls/network/network.c /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/plex/plexgmsh.c /petsc/src/dm/impls/plex/plexinterpolate.c /petsc/src/dm/impls/plex/plexorient.c /petsc/src/dm/impls/plex/plexproject.c /petsc/src/dm/impls/shell/dmshell.c /petsc/src/dm/impls/stag/tests/ex13.c /petsc/src/dm/impls/swarm/data_ex.c /petsc/src/dm/partitioner/tests/ex33.c /petsc/src/docs/sphinx_docs/developers/communication.rst /petsc/src/docs/sphinx_docs/developers/contributing.rst /petsc/src/docs/sphinx_docs/developers/documentation.rst /petsc/src/docs/sphinx_docs/developers/integration.rst /petsc/src/docs/sphinx_docs/developers/kernel.rst /petsc/src/docs/sphinx_docs/developers/objects.rst /petsc/src/docs/sphinx_docs/faq/index.rst /petsc/src/docs/sphinx_docs/install/install_documentation.rst /petsc/src/docs/sphinx_docs/install/multibuild_documentation.rst /petsc/src/docs/sphinx_docs/manual/other.rst /petsc/src/docs/sphinx_docs/overview/gpu_roadmap_documentation.rst /petsc/src/docs/tao_tex/manual/part2b.tex /petsc/src/docs/tex/petsc.bib /petsc/src/docs/website/documentation/changes/34.html /petsc/src/docs/website/documentation/changes/39.html /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/docs/website/documentation/changes/index.html /petsc/src/docs/website/documentation/faq.html /petsc/src/docs/website/documentation/installation.html /petsc/src/docs/website/features/gpus.html /petsc/src/ksp/ksp/tutorials/ex42.c /petsc/src/ksp/pc/impls/bddc/bddcprivate.c /petsc/src/ksp/pc/impls/hpddm/hpddm.cxx seq/mkl_pardiso/mkl_pardiso.c /petsc/src/sys/classes/viewer/impls/binary/binv.c /petsc/src/sys/classes/viewer/interface/viewreg.c /petsc/src/sys/dll/reg.c /petsc/src/sys/makefile /petsc/src/sys/objects/ftn-custom/makefile /petsc/src/sys/objects/ftn-custom/zoptionsyamlf.c /petsc/src/sys/objects/makefile /petsc/src/sys/objects/options.c /petsc/src/sys/objects/optionsyaml.c /petsc/src/sys/objects/prefix.c /petsc/src/sys/tests/ex23.c /petsc/src/sys/tests/ex47-opt.json /petsc/src/sys/tests/ex47-yaml_doc /petsc/src/sys/tests/ex47-yaml_tag /petsc/src/sys/tests/ex47.c /petsc/src/sys/tests/ex47f.F90 /petsc/src/sys/tests/ex48f90.F90 /petsc/src/sys/tests/output/ex47_1.out /petsc/src/sys/tests/output/ex47_2.out /petsc/src/sys/tests/output/ex47_2_auto.out /petsc/src/sys/tests/output/ex47_2_prefix.out /petsc/src/sys/tests/output/ex48f90_1.out /petsc/src/sys/tests/output/ex48f90_2.out /petsc/src/sys/tutorials/ex5.c /petsc/src/sys/tutorials/output/ex5_yaml.out /petsc/src/sys/yaml/License /petsc/src/sys/yaml/README.md /petsc/src/sys/yaml/include/yaml.h /petsc/src/sys/yaml/src/api.c /petsc/src/sys/yaml/src/loader.c /petsc/src/sys/yaml/src/parser.c /petsc/src/sys/yaml/src/reader.c /petsc/src/sys/yaml/src/scanner.c /petsc/src/sys/yaml/src/yaml_private.h /petsc/src/tao/bound/impls/tron/tron.c /petsc/src/tao/leastsquares/tutorials/chwirut2.c /petsc/src/tao/leastsquares/tutorials/chwirut2f.F90 /petsc/src/tao/unconstrained/impls/bmrm/bmrm.c /petsc/src/ts/trajectory/impls/memory/trajmemory.c /petsc/src/ts/tutorials/ex11.c /petsc/src/ts/utils/dmplexlandau/cuda/landaucu.cu /petsc/src/ts/utils/dmplexlandau/kokkos/landau.kokkos.cxx /petsc/src/ts/utils/dmplexlandau/plexland.c /petsc/src/ts/utils/dmplexlandau/tutorials/ex2.c /petsc/src/ts/utils/dmplexlandau/tutorials/output/ex2_cuda.out /petsc/src/vec/vec/tests/ex41.c
55b25c41	19-Feb-2021	Pierre Jolivet <pierre@joliv.et>	CHKERRQ() -> CHKERRMPI() /petsc/config/BuildSystem/config/packages/SuiteSparse.py /petsc/config/BuildSystem/config/packages/ctetgen.py /petsc/config/BuildSystem/config/packages/hpddm.py /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/BuildSystem/config/packages/yaml.py /petsc/include/petsc/private/kspimpl.h /petsc/include/petsc/private/pcasmimpl.h /petsc/include/petsc/private/petschpddm.h /petsc/include/petsc/private/petscimpl.h /petsc/include/petsc/private/snesimpl.h /petsc/include/petscksp.h /petsc/include/petsclog.h /petsc/include/petscoptions.h /petsc/include/petscpc.h /petsc/include/petscsnes.h /petsc/lib/petsc/conf/rules /petsc/src/contrib/fun3d/comp/flow.c /petsc/src/contrib/fun3d/incomp/flow.c /petsc/src/dm/dt/fe/interface/ftn-custom/zfef.c /petsc/src/dm/dt/fv/interface/ftn-custom/zfvf.c /petsc/src/dm/dt/interface/ftn-custom/zdsf.c /petsc/src/dm/f90-mod/petscdmplex.h90 /petsc/src/dm/impls/composite/pack.c 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dc29a518	04-Feb-2021	Pierre Jolivet <pierre@joliv.et>	Add MatPermute() for MATSEQ[S]BAIJ /petsc/config/BuildSystem/RDict.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/slepc.py /petsc/config/BuildSystem/nargs.py /petsc/config/BuildSystem/retrieval.py /petsc/config/BuildSystem/script.py /petsc/config/configure.py /petsc/config/examples/arch-ci-linux-intel-cmplx.py /petsc/gmakefile /petsc/include/petsc/private/kspimpl.h /petsc/include/petsc/private/pcmgimpl.h /petsc/include/petsc/private/petschpddm.h /petsc/include/petscdm.h /petsc/include/petscksp.h /petsc/include/petscoptions.h /petsc/include/petscpc.h /petsc/include/petscsnes.h /petsc/include/petscsys.h /petsc/include/petscversion.h /petsc/include/petscviewer.h /petsc/lib/petsc/conf/rules /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/plex/plexhdf5.c /petsc/src/dm/impls/plex/plexvtu.c /petsc/src/dm/interface/dm.c /petsc/src/docs/sphinx_docs/developers/style.rst /petsc/src/docs/sphinx_docs/faq/index.rst /petsc/src/docs/sphinx_docs/manual/ksp.rst /petsc/src/docs/sphinx_docs/manual/other.rst /petsc/src/docs/tex/petsc.bib /petsc/src/docs/tex/petscapp.bib /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/docs/website/documentation/faq.html /petsc/src/docs/website/download/index.html /petsc/src/docs/website/index.html /petsc/src/ksp/f90-mod/petscksp.h /petsc/src/ksp/ksp/impls/gmres/gmres.c /petsc/src/ksp/ksp/impls/hpddm/hpddm.cxx /petsc/src/ksp/ksp/impls/lsqr/lsqr.c /petsc/src/ksp/ksp/interface/dlregisksp.c /petsc/src/ksp/ksp/interface/ftn-custom/zitfuncf.c /petsc/src/ksp/ksp/interface/ftn-custom/zxonf.c /petsc/src/ksp/ksp/interface/itcl.c /petsc/src/ksp/ksp/interface/itcreate.c /petsc/src/ksp/ksp/interface/iterativ.c /petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/ksp/ksp/interface/itregis.c /petsc/src/ksp/ksp/interface/xmon.c /petsc/src/ksp/ksp/tutorials/ex2f.F90 /petsc/src/ksp/ksp/tutorials/ex5.c /petsc/src/ksp/ksp/tutorials/ex5f.F90 /petsc/src/ksp/ksp/utils/schurm/schurm.c /petsc/src/ksp/pc/impls/bddc/bddc.c /petsc/src/ksp/pc/impls/bddc/bddcschurs.c /petsc/src/ksp/pc/impls/bjacobi/bjacobi.c /petsc/src/ksp/pc/impls/hpddm/hpddm.cxx /petsc/src/ksp/pc/impls/mg/fmg.c /petsc/src/ksp/pc/impls/mg/mg.c /petsc/src/ksp/pc/impls/mg/mgfunc.c /petsc/src/ksp/pc/impls/mg/smg.c /petsc/src/ksp/pc/interface/precon.c seq/aij.c /petsc/src/mat/impls/baij/seq/baij.c /petsc/src/mat/impls/baij/seq/baij.h /petsc/src/mat/impls/baij/seq/baijfact81.c /petsc/src/mat/impls/sbaij/seq/sbaij.c /petsc/src/mat/interface/matrix.c /petsc/src/mat/order/sorder.c /petsc/src/mat/order/sregis.c /petsc/src/snes/f90-mod/petscsnes.h /petsc/src/snes/impls/ls/ls.c /petsc/src/snes/interface/ftn-custom/zsnesf.c /petsc/src/snes/interface/snes.c /petsc/src/snes/interface/snesregi.c /petsc/src/snes/interface/snesut.c /petsc/src/snes/linesearch/interface/linesearch.c /petsc/src/snes/tutorials/ex12.c /petsc/src/snes/tutorials/ex19.c /petsc/src/snes/tutorials/ex69.c /petsc/src/sys/classes/viewer/interface/view.c /petsc/src/sys/fileio/sysio.c /petsc/src/sys/objects/aoptions.c /petsc/src/sys/objects/options.c /petsc/src/sys/tests/ex47-empty.yaml /petsc/src/sys/tests/ex47-include.yaml /petsc/src/sys/tests/ex47-merge.yaml /petsc/src/sys/tests/ex47-options.yaml /petsc/src/sys/tests/ex47.c /petsc/src/sys/tests/ex47f.F90 /petsc/src/sys/tests/ex48f90.F90 /petsc/src/sys/tests/output/ex47_3_empty.out /petsc/src/sys/tests/output/ex47_3_include.out /petsc/src/sys/tests/output/ex47_3_merge.out /petsc/src/sys/tests/output/ex47_3_options.out /petsc/src/sys/yaml/ftn-custom/zyamlimplsf.c /petsc/src/sys/yaml/makefile /petsc/src/sys/yaml/yamlimpls.c /petsc/src/tao/constrained/impls/almm/almm.c /petsc/src/tao/constrained/impls/ipm/pdipm.c /petsc/src/tao/constrained/impls/ipm/pdipm.h /petsc/src/tao/constrained/tutorials/ex1.c /petsc/src/ts/impls/implicit/theta/theta.c /petsc/src/ts/interface/ts.c /petsc/src/ts/tutorials/advection-diffusion-reaction/ex5adj.c /petsc/src/ts/tutorials/advection-diffusion-reaction/output/ex5adj_gamg_1.out /petsc/src/ts/tutorials/advection-diffusion-reaction/output/ex5adj_gamg_2.out /petsc/src/ts/tutorials/ex47.c /petsc/src/ts/utils/dmlocalts.c /petsc/src/vec/vec/impls/nest/vecnest.c
ee70c6cf	01-Feb-2021	Stefano Zampini <stefano.zampini@gmail.com>	MATMKL_PARDISO: do not factorize Schur complement if interior solve has been requested /petsc/.gitlab-ci.yml /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/BuildSystem/config/packages/cuda.py /petsc/config/BuildSystem/config/packages/hpddm.py /petsc/config/BuildSystem/config/packages/slepc.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/examples/arch-ci-linux-cuda-double.py /petsc/config/report_tests.py /petsc/config/testparse.py /petsc/gmakefile /petsc/gmakefile.test /petsc/include/petsc/finclude/petsctao.h /petsc/include/petsc/private/cudavecimpl.h /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petsc/private/petscfeimpl.h /petsc/include/petsc/private/taoimpl.h /petsc/include/petsc/private/vecimpl.h /petsc/include/petscfe.h /petsc/include/petscksp.h /petsc/include/petscsys.h /petsc/include/petsctao.h 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/petsc/src/vec/vec/interface/vecreg.c /petsc/src/vec/vec/interface/vector.c /petsc/src/vec/vec/tests/ex21.c /petsc/src/vec/vec/tests/ex28.c /petsc/src/vec/vec/tests/ex43.c /petsc/src/vec/vec/tests/output/ex21_1.out /petsc/src/vec/vec/tests/output/ex21_2.out
9b063c11	21-Jan-2021	Satish Balay <balay@mcs.anl.gov>	Merge remote-tracking branch 'origin/release' /petsc/.gitignore /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/make.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/BuildSystem/nargs.py /petsc/include/petsc/private/vecimpl.h /petsc/include/petscsys.h /petsc/include/petscvec.h /petsc/src/binding/petsc4py/.gitignore /petsc/src/binding/petsc4py/src/PETSc/Vec.pyx /petsc/src/binding/petsc4py/src/PETSc/petscvec.pxi /petsc/src/binding/petsc4py/src/include/compat/cuda.h /petsc/src/binding/petsc4py/test/test_dmplex.py /petsc/src/dm/impls/network/network.c /petsc/src/dm/impls/plex/plexnatural.c /petsc/src/docs/sphinx_docs/developers/integration.rst /petsc/src/docs/sphinx_docs/developers/testing.rst /petsc/src/docs/sphinx_docs/guides/physics/guide_to_stokes.rst /petsc/src/docs/sphinx_docs/manual/snes.rst /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/docs/website/documentation/faq.html mpi/fdmpiaij.c /petsc/src/mat/impls/dense/mpi/mpidense.c /petsc/src/mat/interface/matrix.c /petsc/src/mat/matfd/fdmatrix.c /petsc/src/sys/fileio/mprint.c /petsc/src/tao/bound/impls/bqnk/bqnk.c /petsc/src/ts/impls/implicit/theta/theta.c /petsc/src/ts/tutorials/ex23fwdadj.c /petsc/src/ts/tutorials/ex25.c /petsc/src/ts/tutorials/makefile /petsc/src/ts/tutorials/output/ex23fwdadj_1.out /petsc/src/vec/vec/impls/mpi/pbvec.c /petsc/src/vec/vec/impls/nest/vecnest.c /petsc/src/vec/vec/impls/seq/bvec2.c /petsc/src/vec/vec/interface/rvector.c /petsc/src/vec/vec/tutorials/ex44.c /petsc/src/vec/vec/tutorials/makefile /petsc/src/vec/vec/tutorials/output/ex44_cuda.out /petsc/src/vec/vec/tutorials/output/ex44_parallel.out /petsc/src/vec/vec/tutorials/output/ex44_serial.out /petsc/src/vec/vec/tutorials/output/ex44_uneven.out
ce911d59	21-Jan-2021	Richard Tran Mills <rmills@rmills.org>	Fix two misspellings that occur multiple places in comments and FAQ. Fixes "instensively" --> "intensively", "benifit" --> "benefit". Commit-type: docs /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/BuildSystem/config/packages/python.py /petsc/config/BuildSystem/nargs.py /petsc/config/configure.py /petsc/config/query_tests.py /petsc/gmakefile.test /petsc/include/petscsys.h /petsc/include/petscsystypes.h /petsc/include/petscversion.h /petsc/lib/petsc/conf/rules /petsc/share/petsc/matlab/@PetscOpenSocket/read.m /petsc/share/petsc/matlab/@PetscOpenSocket/write.m /petsc/share/petsc/matlab/PetscBinaryRead.m /petsc/share/petsc/matlab/launch.m /petsc/src/binding/petsc4py/.gitignore /petsc/src/binding/petsc4py/CHANGES.rst /petsc/src/binding/petsc4py/LICENSE.rst /petsc/src/binding/petsc4py/conf/cythonize.py /petsc/src/binding/petsc4py/conf/cythonize.sh /petsc/src/binding/petsc4py/docs/source/conf.py /petsc/src/binding/petsc4py/makefile /petsc/src/binding/petsc4py/setup.py /petsc/src/binding/petsc4py/src/__init__.py /petsc/src/dm/tests/ex12.m /petsc/src/docs/sphinx_docs/developers/testing.rst /petsc/src/docs/sphinx_docs/manual/snes.rst /petsc/src/docs/website/documentation/faq.html /petsc/src/docs/website/download/index.html /petsc/src/ksp/ksp/interface/itcreate.c mpi/fdmpiaij.c /petsc/src/mat/impls/dense/mpi/mpidense.c /petsc/src/mat/interface/matrix.c /petsc/src/mat/matfd/fdmatrix.c /petsc/src/snes/interface/snes.c /petsc/src/sys/classes/viewer/impls/socket/send.c /petsc/src/sys/fileio/mprint.c /petsc/src/sys/objects/options.c /petsc/src/sys/python/pythonsys.c /petsc/src/sys/tests/options/ex55.c /petsc/src/sys/tests/options/output/ex55_6a.out /petsc/src/sys/tests/options/output/ex55_6b.out /petsc/src/sys/tests/options/output/ex55_6c.out /petsc/src/sys/tests/options/rc_help /petsc/src/sys/tests/options/rc_help_intro /petsc/src/sys/tests/options/rc_version /petsc/src/ts/interface/ts.c /petsc/src/ts/tutorials/ex25.c /petsc/src/ts/utils/dmplexlandau/plexland.c /petsc/src/vec/vec/interface/ftn-custom/zvectorf.c /petsc/src/vec/vec/interface/vector.c
a49f1ed0	08-Jan-2021	Stefano Zampini <stefano.zampini@gmail.com>	MATSEQAIJCUSPARSE: better handling of explicit transposition keep track when the transposed matrix needs to be updated call csr2csc only once, use thrust calls otherwise /petsc/src/ksp/ksp/tutorials/ex71.c seq/seqcusparse/aijcusparse.cu seq/seqcusparse/cusparsematimpl.h /petsc/src/mat/impls/dense/mpi/mpidense.c /petsc/src/mat/impls/dense/seq/cuda/densecuda.cu /petsc/src/mat/impls/dense/seq/dense.c /petsc/src/mat/impls/dense/seq/dense.h /petsc/src/sys/error/err.c
d2be01ed	04-Jan-2021	Stefano Zampini <stefano.zampini@gmail.com>	MatAXPY_SeqAIJCUSPARSE: CUDA routines are buggy with 1 column! seq/seqcusparse/aijcusparse.cu /petsc/src/mat/tests/ex70.c /petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu
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