History log of /petsc/src/mat/impls/baij/ (Results 626 – 650 of 2282)
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3e21937317-Jan-2015 Barry Smith <bsmith@mcs.anl.gov>

cannot call PetscObjectGetName() on a subset of the MPI processes

a09cf4f717-Jan-2015 Barry Smith <bsmith@mcs.anl.gov>

Merge branch 'maint'


/petsc/bin/maint/generatefortranstubs.py
/petsc/config/BuildSystem/config/packages/SuiteSparse.py
/petsc/config/BuildSystem/config/packages/ctetgen.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/configure.py
/petsc/config/examples/arch-linux-gcc-real-env.py
/petsc/config/examples/arch-osx-10.6-cxx-env.py
/petsc/lib/petsc-conf/install.py
/petsc/setup.py
/petsc/src/dm/impls/plex/ftn-custom/makefile
/petsc/src/dm/impls/plex/ftn-custom/zplexgmsh.c
/petsc/src/dm/impls/plex/plexgmsh.c
/petsc/src/dm/impls/plex/plexlabel.c
/petsc/src/dm/impls/plex/plexsubmesh.c
/petsc/src/docs/tex/manual/acknowl.tex
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/linearsolvertable.html
/petsc/src/docs/website/index.html
/petsc/src/docs/website/miscellaneous/external.html
/petsc/src/ksp/ksp/examples/tests/ex32.c
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tests/output/ex32_cholmod.out
/petsc/src/ksp/ksp/examples/tests/output/ex32_cholmod_sbaij.out
/petsc/src/ksp/ksp/impls/lsqr/lsqr.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/seq/klu/klu.c
/petsc/src/mat/impls/aij/seq/umfpack/umfpack.c
mpi/mpibaij.c
seq/baij.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex19_umfpack.out
/petsc/src/vec/is/sf/interface/sf.c
ade3a67217-Jan-2015 Barry Smith <bsmith@mcs.anl.gov>

MatView() with some matrix formats and ASCII_MATLAB did not print correct matrix name

Reported-by: Michael Souza <souza.michael@gmail.com>

fe998a8013-Jan-2015 Barry Smith <bsmith@mcs.anl.gov>

manual merge of conflict


/petsc/bin/configVars.py
/petsc/bin/maint/builddist
/petsc/bin/maint/buildtest
/petsc/bin/maint/generateetags.py
/petsc/bin/maint/generatefortranstubs.py
/petsc/bin/maint/generators/matlab.py
/petsc/bin/maint/toclapack.sh
/petsc/bin/maint/xclude
/petsc/bin/mpiexec.sshsync
/petsc/bin/petsc-mpiexec.uni
/petsc/bin/petsc-pythonscripts/PetscBinaryIO.py
/petsc/bin/petsc-pythonscripts/PetscBinaryIO_tests.py
/petsc/bin/petsc-pythonscripts/petsc_conf.py
/petsc/bin/petsc-pythonscripts/petsc_gen_xdmf.py
/petsc/bin/petsc-pythonscripts/petsclogformat.py
/petsc/bin/petsc-pythonscripts/petscnagupgrade.py
/petsc/bin/petscmpiexec
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/MPI.py
/petsc/config/BuildSystem/config/packages/Triangle.py
/petsc/config/BuildSystem/config/packages/fblaslapack.py
/petsc/config/BuildSystem/config/packages/mpi4py.py
/petsc/config/BuildSystem/config/packages/petsc4py.py
/petsc/config/BuildSystem/config/regression/frameworkTest.py
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/options/installDir.py
/petsc/config/PETSc/petsc.py
/petsc/config/builder.py
/petsc/config/cmakeboot.py
/petsc/config/cmakegen.py
/petsc/config/configure.py
/petsc/gmakefile
/petsc/include/makefile
/petsc/include/petsc-finclude/ftn-custom/makefile
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/petsc/include/petsc-mpiuni/mpi.h
/petsc/include/petsc-mpiuni/mpif.h
/petsc/include/petsc-private/makefile
/petsc/include/petsclog.h
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/petsc/lib/petsc-conf/adic.init
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/petsc/lib/petsc-conf/variables
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/petsc/src/contrib/fun3d/comp/makefile
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/petsc/src/docs/website/developers/index.html
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/f90-mod/makefile
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/petsc/src/snes/linesearch/interface/makefile
/petsc/src/snes/linesearch/makefile
/petsc/src/snes/makefile
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/petsc/src/snes/utils/makefile
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/petsc/src/sys/classes/random/examples/makefile
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/petsc/src/sys/mpiuni/f90-mod/makefile
/petsc/src/sys/mpiuni/f90-mod/mpiunimod.F
/petsc/src/sys/mpiuni/makefile
/petsc/src/sys/objects/f2003-src/fsrc/makefile
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/petsc/src/sys/time/makefile
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/petsc/src/sys/utils/ftn-kernels/makefile
/petsc/src/sys/utils/makefile
/petsc/src/sys/webclient/examples/makefile
/petsc/src/sys/webclient/examples/tutorials/makefile
/petsc/src/sys/webclient/makefile
/petsc/src/sys/yaml/ftn-custom/makefile
/petsc/src/sys/yaml/makefile
/petsc/src/tao/bound/examples/makefile
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/petsc/src/tao/bound/impls/blmvm/makefile
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/petsc/src/tao/complementarity/makefile
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/petsc/src/tao/interface/makefile
/petsc/src/tao/leastsquares/examples/makefile
/petsc/src/tao/leastsquares/examples/tutorials/makefile
/petsc/src/tao/leastsquares/impls/makefile
/petsc/src/tao/leastsquares/impls/pounders/makefile
/petsc/src/tao/leastsquares/makefile
/petsc/src/tao/linesearch/impls/armijo/makefile
/petsc/src/tao/linesearch/impls/gpcglinesearch/makefile
/petsc/src/tao/linesearch/impls/makefile
/petsc/src/tao/linesearch/impls/morethuente/makefile
/petsc/src/tao/linesearch/impls/owarmijo/makefile
/petsc/src/tao/linesearch/impls/unit/makefile
/petsc/src/tao/linesearch/interface/ftn-custom/makefile
/petsc/src/tao/linesearch/interface/makefile
/petsc/src/tao/linesearch/makefile
/petsc/src/tao/makefile
/petsc/src/tao/matrix/makefile
/petsc/src/tao/pde_constrained/examples/makefile
/petsc/src/tao/pde_constrained/examples/tutorials/makefile
/petsc/src/tao/pde_constrained/impls/lcl/makefile
/petsc/src/tao/pde_constrained/impls/makefile
/petsc/src/tao/pde_constrained/makefile
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/petsc/src/tao/unconstrained/examples/tests/makefile
/petsc/src/tao/unconstrained/examples/tutorials/makefile
/petsc/src/tao/unconstrained/impls/bmrm/makefile
/petsc/src/tao/unconstrained/impls/cg/makefile
/petsc/src/tao/unconstrained/impls/lmvm/makefile
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/petsc/src/tao/unconstrained/impls/neldermead/makefile
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/petsc/src/tao/unconstrained/impls/owlqn/makefile
/petsc/src/tao/unconstrained/makefile
/petsc/src/tao/util/makefile
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/petsc/src/ts/characteristic/makefile
/petsc/src/ts/event/makefile
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/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/makefile
/petsc/src/ts/examples/tutorials/eimex/makefile
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/examples/tutorials/phasefield/makefile
/petsc/src/ts/examples/tutorials/power_grid/makefile
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/makefile
/petsc/src/ts/f90-mod/makefile
/petsc/src/ts/impls/arkimex/ftn-custom/makefile
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/petsc/src/ts/impls/eimex/makefile
/petsc/src/ts/impls/explicit/euler/makefile
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/petsc/src/ts/impls/explicit/rk/makefile
/petsc/src/ts/impls/explicit/ssp/ftn-custom/makefile
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/petsc/src/ts/impls/implicit/sundials/ftn-custom/makefile
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/petsc/src/ts/impls/implicit/theta/makefile
/petsc/src/ts/impls/makefile
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/petsc/src/ts/impls/python/ftn-custom/makefile
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/petsc/src/vec/is/ao/impls/memscalable/makefile
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/petsc/src/vec/is/ao/interface/makefile
/petsc/src/vec/is/ao/makefile
/petsc/src/vec/is/examples/makefile
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/petsc/src/vec/is/is/examples/tutorials/makefile
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/petsc/src/vec/is/is/utils/makefile
/petsc/src/vec/is/makefile
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/petsc/src/vec/is/sf/impls/basic/makefile
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/petsc/src/vec/is/utils/makefile
/petsc/src/vec/makefile
/petsc/src/vec/pf/examples/makefile
/petsc/src/vec/pf/examples/tutorials/makefile
/petsc/src/vec/pf/impls/constant/makefile
/petsc/src/vec/pf/impls/makefile
/petsc/src/vec/pf/impls/matlab/makefile
/petsc/src/vec/pf/impls/string/makefile
/petsc/src/vec/pf/interface/makefile
/petsc/src/vec/pf/makefile
/petsc/src/vec/vec/examples/makefile
/petsc/src/vec/vec/examples/tests/makefile
/petsc/src/vec/vec/examples/tutorials/makefile
/petsc/src/vec/vec/impls/hypre/makefile
/petsc/src/vec/vec/impls/makefile
/petsc/src/vec/vec/impls/mpi/ftn-custom/makefile
/petsc/src/vec/vec/impls/mpi/makefile
/petsc/src/vec/vec/impls/mpi/mpicusp/makefile
/petsc/src/vec/vec/impls/mpi/mpiviennacl/makefile
/petsc/src/vec/vec/impls/nest/ftn-custom/makefile
/petsc/src/vec/vec/impls/nest/makefile
/petsc/src/vec/vec/impls/seq/ftn-custom/makefile
/petsc/src/vec/vec/impls/seq/ftn-kernels/makefile
/petsc/src/vec/vec/impls/seq/makefile
/petsc/src/vec/vec/impls/seq/seqcusp/makefile
/petsc/src/vec/vec/impls/seq/seqviennacl/makefile
/petsc/src/vec/vec/impls/shared/makefile
/petsc/src/vec/vec/interface/f90-custom/makefile
/petsc/src/vec/vec/interface/ftn-custom/makefile
/petsc/src/vec/vec/interface/makefile
/petsc/src/vec/vec/makefile
/petsc/src/vec/vec/utils/f90-custom/makefile
/petsc/src/vec/vec/utils/ftn-custom/makefile
/petsc/src/vec/vec/utils/makefile
/petsc/src/vec/vec/utils/matlab/makefile
/petsc/src/vec/vec/utils/veccusp/makefile
/petsc/tutorials/makefile
/petsc/tutorials/python/makefile
8fb4249331-Dec-2014 Barry Smith <bsmith@mcs.anl.gov>

mv include/finclude to include/petsc-finclude for namespacing in installs


/petsc/bin/maint/PetscStaticFunctionCandidates.py
/petsc/bin/maint/generatefortranstubs.py
/petsc/bin/petscpythonscripts/PetscBinaryIO.py
/petsc/bin/petscpythonscripts/PetscBinaryIO_tests.py
/petsc/bin/petscpythonscripts/petsc_conf.py
/petsc/bin/petscpythonscripts/petsc_gen_xdmf.py
/petsc/bin/petscpythonscripts/petsclogformat.py
/petsc/bin/petscpythonscripts/petscnagupgrade.py
/petsc/bin/portabilitycheck.py
/petsc/conf/install.py
/petsc/conf/rules
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/BlasLapack.py
/petsc/config/BuildSystem/config/packages/MPICH.py
/petsc/config/BuildSystem/config/packages/PTScotch.py
/petsc/config/BuildSystem/config/packages/PaStiX.py
/petsc/config/BuildSystem/config/packages/SuperLU_DIST.py
/petsc/config/BuildSystem/config/packages/SuperLU_MT.py
/petsc/config/BuildSystem/config/packages/Zoltan.py
/petsc/config/BuildSystem/config/packages/hwloc.py
/petsc/config/BuildSystem/config/packages/hypre.py
/petsc/config/BuildSystem/config/packages/metis.py
/petsc/config/BuildSystem/config/packages/mkl_cpardiso.py
/petsc/config/BuildSystem/config/packages/parmetis.py
/petsc/config/BuildSystem/config/packages/petsc4py.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/Regression.py
/petsc/config/PETSc/options/indexTypes.py
/petsc/config/PETSc/options/libraryOptions.py
/petsc/config/builder.py
/petsc/config/cmakeboot.py
/petsc/config/configure.py
/petsc/config/examples/arch-ms-msvc2012-intelmpi-cudano-nomumps-cpardiso-indexes64-mklilp64-debug.py
/petsc/include/makefile
/petsc/include/mpiuni/mpi.h
/petsc/include/petsc-finclude/ftn-custom/makefile
/petsc/include/petsc-finclude/ftn-custom/petscdm.h90
/petsc/include/petsc-finclude/ftn-custom/petscdmcomposite.h90
/petsc/include/petsc-finclude/ftn-custom/petscdmda.h90
/petsc/include/petsc-finclude/ftn-custom/petscdmdef.h90
/petsc/include/petsc-finclude/ftn-custom/petscdmhide.h90
/petsc/include/petsc-finclude/ftn-custom/petscdmplex.h90
/petsc/include/petsc-finclude/ftn-custom/petscdmplexdef.h90
/petsc/include/petsc-finclude/ftn-custom/petscdmredundant.h90
/petsc/include/petsc-finclude/ftn-custom/petscdmshell.h90
/petsc/include/petsc-finclude/ftn-custom/petscdt.h90
/petsc/include/petsc-finclude/ftn-custom/petscdtdef.h90
/petsc/include/petsc-finclude/ftn-custom/petscdthide.h90
/petsc/include/petsc-finclude/ftn-custom/petscis.h90
/petsc/include/petsc-finclude/ftn-custom/petscisdef.h90
/petsc/include/petsc-finclude/ftn-custom/petscishide.h90
/petsc/include/petsc-finclude/ftn-custom/petscksp.h90
/petsc/include/petsc-finclude/ftn-custom/petsckspdef.h90
/petsc/include/petsc-finclude/ftn-custom/petscksphide.h90
/petsc/include/petsc-finclude/ftn-custom/petscmat.h90
/petsc/include/petsc-finclude/ftn-custom/petscmatdef.h90
/petsc/include/petsc-finclude/ftn-custom/petscmathide.h90
/petsc/include/petsc-finclude/ftn-custom/petscpc.h90
/petsc/include/petsc-finclude/ftn-custom/petscpcdef.h90
/petsc/include/petsc-finclude/ftn-custom/petscpchide.h90
/petsc/include/petsc-finclude/ftn-custom/petscsnes.h90
/petsc/include/petsc-finclude/ftn-custom/petscsnesdef.h90
/petsc/include/petsc-finclude/ftn-custom/petscsneshide.h90
/petsc/include/petsc-finclude/ftn-custom/petscts.h90
/petsc/include/petsc-finclude/ftn-custom/petsctsdef.h90
/petsc/include/petsc-finclude/ftn-custom/petsctshide.h90
/petsc/include/petsc-finclude/ftn-custom/petscvec.h90
/petsc/include/petsc-finclude/ftn-custom/petscvecdef.h90
/petsc/include/petsc-finclude/ftn-custom/petscvechide.h90
/petsc/include/petsc-finclude/ftn-custom/petscviewer.h90
/petsc/include/petsc-finclude/ftn-custom/petscviewerdef.h90
/petsc/include/petsc-finclude/ftn-custom/petscviewerhide.h90
/petsc/include/petsc-finclude/makefile
/petsc/include/petsc-finclude/petsc.h
/petsc/include/petsc-finclude/petsc.h90
/petsc/include/petsc-finclude/petscao.h
/petsc/include/petsc-finclude/petscaodef.h
/petsc/include/petsc-finclude/petscbag.h
/petsc/include/petsc-finclude/petscbagdef.h
/petsc/include/petsc-finclude/petscdef.h
/petsc/include/petsc-finclude/petscdm.h
/petsc/include/petsc-finclude/petscdm.h90
/petsc/include/petsc-finclude/petscdmcomposite.h90
/petsc/include/petsc-finclude/petscdmda.h
/petsc/include/petsc-finclude/petscdmda.h90
/petsc/include/petsc-finclude/petscdmdadef.h
/petsc/include/petsc-finclude/petscdmdef.h
/petsc/include/petsc-finclude/petscdmplex.h
/petsc/include/petsc-finclude/petscdmplex.h90
/petsc/include/petsc-finclude/petscdmplexdef.h
/petsc/include/petsc-finclude/petscdmredundant.h90
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955c1f1422-Dec-2014 Barry Smith <bsmith@mcs.anl.gov>

-ksp_richardson_scale was ignored when PCApplyRichardson() was used
Fix: turn off PCApplyRichardson() when scale is not 1 and print PetscInfo warning

Reported-by: Mark Adams <mfadams@lbl.gov>

Fixed

-ksp_richardson_scale was ignored when PCApplyRichardson() was used
Fix: turn off PCApplyRichardson() when scale is not 1 and print PetscInfo warning

Reported-by: Mark Adams <mfadams@lbl.gov>

Fixed missing carriage return in uses of PetscInfo() and missing ierr CHKERRQ() usage

show more ...

fedbf77720-Dec-2014 Barry Smith <bsmith@mcs.anl.gov>

Merge branch 'rlacroix/fix_bs_mpibaij_to_mpiaij'


/petsc/config/BuildSystem/config/package.py
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/petsc/src/dm/impls/plex/examples/tests/output/ex1_16.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_17.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_18.out
/petsc/src/dm/impls/plex/makefile
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/plex/plexgenerate.c
/petsc/src/dm/impls/plex/plexgmsh.c
/petsc/src/dm/impls/plex/plexorient.c
/petsc/src/docs/tex/manual/developers.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petsc.bib
/petsc/src/ksp/ksp/examples/tutorials/ex43.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex43_3.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex43_bjacobi.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex43_nested_gmg.out
/petsc/src/ksp/ksp/impls/fcg/fcg.c
/petsc/src/ksp/pc/impls/bddc/bddcgraph.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/mat/examples/tests/ex99.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
mpi/mpibaij.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tutorials/ex19.c
/petsc/src/snes/impls/composite/snescomposite.c
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/gs/gssecant.c
/petsc/src/snes/interface/snes.c
/petsc/src/sys/classes/viewer/impls/ascii/filev.c
/petsc/src/sys/classes/viewer/impls/binary/binv.c
/petsc/src/sys/classes/viewer/interface/view.c
/petsc/src/sys/dll/dlimpl.c
/petsc/src/sys/error/checkptr.c
/petsc/src/sys/error/err.c
/petsc/src/sys/error/errtrace.c
/petsc/src/sys/logging/utils/eventlog.c
/petsc/src/sys/objects/inherit.c
/petsc/src/sys/objects/init.c
/petsc/src/sys/objects/options.c
/petsc/src/sys/objects/pinit.c
/petsc/src/ts/adapt/interface/tsadapt.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9bus.c
/petsc/src/vec/vec/interface/rvector.c
72e5196730-Nov-2014 Barry Smith <bsmith@mcs.anl.gov>

Merge branch 'barry/remove-unneeded-paren-petscmalloc'

Conflicts:
src/mat/impls/baij/seq/baij.c


/petsc/conf/rules
/petsc/config/BuildSystem/config/packages/viennacl.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/BuildSystem/config/sourceControl.py
/petsc/config/BuildSystem/config/utilities/missing.py
/petsc/config/PETSc/Regression.py
/petsc/config/PETSc/options/petscclone.py
/petsc/gmakefile
/petsc/include/petscbt.h
/petsc/include/petscsys.h
/petsc/makefile
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/examples/tests/ex8.c
/petsc/src/dm/examples/tests/makefile
/petsc/src/dm/examples/tutorials/ex1.c
/petsc/src/dm/examples/tutorials/ex6.c
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/da/da.c
/petsc/src/dm/impls/da/da1.c
/petsc/src/dm/impls/da/dadd.c
/petsc/src/dm/impls/da/dagetelem.c
/petsc/src/dm/impls/da/dainterp.c
/petsc/src/dm/impls/da/daltol.c
/petsc/src/dm/impls/da/dapreallocate.c
/petsc/src/dm/impls/da/fdda.c
/petsc/src/dm/impls/da/usfft/matusfft.c
/petsc/src/dm/impls/network/network.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexdistribute.c
/petsc/src/dm/impls/plex/plexgenerate.c
/petsc/src/dm/impls/plex/plexgmsh.c
/petsc/src/dm/impls/plex/plexlabel.c
/petsc/src/dm/impls/plex/plexpartition.c
/petsc/src/dm/impls/plex/plexrefine.c
/petsc/src/dm/impls/plex/plexreorder.c
/petsc/src/dm/impls/plex/plexsubmesh.c
/petsc/src/dm/impls/plex/plextree.c
/petsc/src/dm/impls/plex/plexvtk.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmget.c
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/ksp/examples/tests/ex10.c
/petsc/src/ksp/ksp/examples/tests/ex11.c
/petsc/src/ksp/ksp/examples/tests/ex30.c
/petsc/src/ksp/ksp/examples/tests/ex32.c
/petsc/src/ksp/ksp/examples/tests/ex4.c
/petsc/src/ksp/ksp/examples/tutorials/ex10.c
/petsc/src/ksp/ksp/examples/tutorials/ex42.c
/petsc/src/ksp/ksp/examples/tutorials/ex43.c
/petsc/src/ksp/ksp/examples/tutorials/ex49.c
/petsc/src/ksp/ksp/examples/tutorials/ex51.c
/petsc/src/ksp/ksp/examples/tutorials/ex52.c
/petsc/src/ksp/ksp/examples/tutorials/ex56.c
/petsc/src/ksp/ksp/examples/tutorials/ex59.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/impls/cg/groppcg/groppcg.c
/petsc/src/ksp/ksp/impls/cg/pipecg/pipecg.c
/petsc/src/ksp/ksp/impls/cr/pipecr/pipecr.c
/petsc/src/ksp/ksp/impls/gcr/gcr.c
/petsc/src/ksp/ksp/impls/gmres/borthog2.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/impls/gmres/fgmres/fgmres.c
/petsc/src/ksp/ksp/impls/gmres/gmres.c
/petsc/src/ksp/ksp/impls/gmres/lgmres/lgmres.c
/petsc/src/ksp/ksp/impls/gmres/pgmres/pgmres.c
/petsc/src/ksp/ksp/interface/iguess.c
/petsc/src/ksp/pc/impls/asm/asm.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddc.h
/petsc/src/ksp/pc/impls/bddc/bddcfetidp.c
/petsc/src/ksp/pc/impls/bddc/bddcgraph.c
/petsc/src/ksp/pc/impls/bddc/bddcnullspace.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcscalingbasic.c
/petsc/src/ksp/pc/impls/bjacobi/bjacobi.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/gasm/gasm.c
/petsc/src/ksp/pc/impls/is/nn/nn.c
/petsc/src/ksp/pc/impls/is/pcis.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/ksp/pc/impls/parms/parms.c
/petsc/src/ksp/pc/impls/redistribute/redistribute.c
/petsc/src/ksp/pc/impls/tfs/tfs.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/coarsen/impls/hem/hem.c
/petsc/src/mat/color/impls/minpack/color.c
/petsc/src/mat/color/impls/natural/natural.c
/petsc/src/mat/color/utils/bipartite.c
/petsc/src/mat/color/utils/valid.c
/petsc/src/mat/examples/tests/ex116.c
/petsc/src/mat/examples/tests/ex118.c
/petsc/src/mat/examples/tests/ex120.c
/petsc/src/mat/examples/tests/ex129.c
/petsc/src/mat/examples/tests/ex144.c
/petsc/src/mat/examples/tests/ex146.c
/petsc/src/mat/examples/tests/ex152.c
/petsc/src/mat/examples/tests/ex32.c
/petsc/src/mat/examples/tests/ex99.c
/petsc/src/mat/examples/tutorials/ex12.c
/petsc/src/mat/examples/tutorials/ex5.c
/petsc/src/mat/impls/adj/mpi/mpiadj.c
/petsc/src/mat/impls/aij/mpi/crl/mcrl.c
/petsc/src/mat/impls/aij/mpi/fdmpiaij.c
/petsc/src/mat/impls/aij/mpi/mmaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/aij/mpi/mpiov.c
/petsc/src/mat/impls/aij/mpi/mpiptap.c
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/mpi/pastix/pastix.c
/petsc/src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aijfact.c
/petsc/src/mat/impls/aij/seq/bas/basfactor.c
/petsc/src/mat/impls/aij/seq/bas/spbas.c
/petsc/src/mat/impls/aij/seq/csrperm/csrperm.c
/petsc/src/mat/impls/aij/seq/ij.c
/petsc/src/mat/impls/aij/seq/inode.c
/petsc/src/mat/impls/aij/seq/matlab/aijmatlab.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c
/petsc/src/mat/impls/aij/seq/seqcusp/aijcusp.cu
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/aij/seq/superlu/superlu.c
/petsc/src/mat/impls/aij/seq/symtranspose.c
mpi/baijov.c
mpi/mmbaij.c
mpi/mpibaij.c
seq/baij.c
seq/baij2.c
seq/baijfact.c
seq/baijfact2.c
seq/baijfact3.c
/petsc/src/mat/impls/cufft/cufft.cu
/petsc/src/mat/impls/dense/mpi/mmdense.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/fft/fftw/fftw.c
/petsc/src/mat/impls/is/matis.c
/petsc/src/mat/impls/maij/maij.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/mpi/sbaijov.c
/petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij2.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact2.c
/petsc/src/mat/impls/shell/shellcnv.c
/petsc/src/mat/order/sorder.c
/petsc/src/mat/partition/impls/chaco/chaco.c
/petsc/src/mat/partition/impls/party/party.c
/petsc/src/mat/partition/impls/scotch/scotch.c
/petsc/src/mat/partition/partition.c
/petsc/src/mat/utils/axpy.c
/petsc/src/mat/utils/pheap.c
/petsc/src/snes/examples/tutorials/ex30.c
/petsc/src/snes/examples/tutorials/ex5s.c
/petsc/src/snes/impls/composite/snescomposite.c
/petsc/src/snes/impls/ms/ms.c
/petsc/src/snes/impls/multiblock/multiblock.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/vi/rs/virs.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesut.c
/petsc/src/sys/classes/draw/interface/draw.c
/petsc/src/sys/classes/draw/utils/hists.c
/petsc/src/sys/classes/viewer/impls/ascii/filev.c
/petsc/src/sys/classes/viewer/impls/binary/binv.c
/petsc/src/sys/dll/reg.c
/petsc/src/sys/error/fp.c
/petsc/src/sys/fileio/fretrieve.c
/petsc/src/sys/fileio/ftest.c
/petsc/src/sys/ftn-custom/zutils.c
/petsc/src/sys/objects/aoptions.c
/petsc/src/sys/objects/fcallback.c
/petsc/src/sys/objects/options.c
/petsc/src/sys/objects/prefix.c
/petsc/src/sys/objects/subcomm.c
/petsc/src/sys/objects/tagm.c
/petsc/src/sys/threadcomm/examples/tutorials/ex2.c
/petsc/src/sys/threadcomm/interface/threadcomm.c
/petsc/src/sys/utils/ctable.c
/petsc/src/sys/utils/mpimesg.c
/petsc/src/sys/utils/mpiu.c
/petsc/src/sys/utils/str.c
/petsc/src/sys/yaml/yamlimpls.c
/petsc/src/tao/constrained/impls/ipm/ipm.c
/petsc/src/tao/leastsquares/impls/pounders/pounders.c
/petsc/src/tao/pde_constrained/examples/tutorials/elliptic.c
/petsc/src/tao/unconstrained/impls/neldermead/neldermead.c
/petsc/src/ts/characteristic/impls/da/slda.c
/petsc/src/ts/characteristic/interface/characteristic.c
/petsc/src/ts/event/tsevent.c
/petsc/src/ts/examples/tests/ex10.c
/petsc/src/ts/examples/tests/ex22.c
/petsc/src/ts/examples/tests/ex3.c
/petsc/src/vec/is/ao/impls/basic/aobasic.c
/petsc/src/vec/is/ao/impls/mapping/aomapping.c
/petsc/src/vec/is/ao/impls/memscalable/aomemscalable.c
/petsc/src/vec/is/is/utils/f90-custom/ziscoloringf90.c
/petsc/src/vec/is/is/utils/ftn-custom/ziscoloringf.c
/petsc/src/vec/is/is/utils/iscoloring.c
/petsc/src/vec/is/is/utils/isdiff.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
/petsc/src/vec/is/sf/impls/window/sfwindow.c
/petsc/src/vec/is/sf/interface/sf.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/is/utils/pmap.c
/petsc/src/vec/is/utils/vsectionis.c
/petsc/src/vec/vec/examples/tests/ex24.c
/petsc/src/vec/vec/examples/tutorials/ex9.c
/petsc/src/vec/vec/impls/mpi/pbvec.c
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/interface/f90-custom/zvectorf90.c
/petsc/src/vec/vec/utils/vinv.c
a315c07020-Nov-2014 Matthew G. Knepley <knepley@gmail.com>

Merge remote-tracking branch 'lawrence/fix-baij-threads'

* lawrence/fix-baij-threads:
Fix buffer overrun in threaded MatZeroEntries_SeqBAIJ

039eb77418-Nov-2014 Barry Smith <bsmith@mcs.anl.gov>

Merge branch 'barry/fix-matsetsize-matload' into maint

3d98edf218-Nov-2014 Barry Smith <bsmith@mcs.anl.gov>

Merge branch 'barry/fix-memoryallocation-matsor-seqbaij'

00cf48c418-Nov-2014 Barry Smith <bsmith@mcs.anl.gov>

Merge branch 'barry/fix-matsetsize-matload'

Conflicts:
src/mat/examples/tests/makefile

3475c22f15-Nov-2014 Barry Smith <bsmith@mcs.anl.gov>

if () test was on wrong work array

854ce69b15-Nov-2014 Barry Smith <bsmith@mcs.anl.gov>

convert some PetscMalloc() to PetscMalloc1()
remove unneeded () in first argument to PetscMalloc/Calloc1()
fixes for MATLAB examples


/petsc/bin/petscnagupgrade.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/BlasLapack.py
/petsc/config/BuildSystem/config/packages/cuda.py
/petsc/config/BuildSystem/config/packages/cusp.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/PETSc/Regression.py
/petsc/config/PETSc/options/arch.py
/petsc/include/petscblaslapack.h
/petsc/include/petscbt.h
/petsc/include/petscmat.h
/petsc/include/petscsys.h
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/examples/tests/ex8.c
/petsc/src/dm/examples/tests/makefile
/petsc/src/dm/examples/tutorials/ex1.c
/petsc/src/dm/examples/tutorials/ex6.c
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/da/da.c
/petsc/src/dm/impls/da/da1.c
/petsc/src/dm/impls/da/dadd.c
/petsc/src/dm/impls/da/dagetelem.c
/petsc/src/dm/impls/da/dainterp.c
/petsc/src/dm/impls/da/daltol.c
/petsc/src/dm/impls/da/dapreallocate.c
/petsc/src/dm/impls/da/fdda.c
/petsc/src/dm/impls/da/usfft/matusfft.c
/petsc/src/dm/impls/network/network.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexdistribute.c
/petsc/src/dm/impls/plex/plexgenerate.c
/petsc/src/dm/impls/plex/plexgmsh.c
/petsc/src/dm/impls/plex/plexlabel.c
/petsc/src/dm/impls/plex/plexpartition.c
/petsc/src/dm/impls/plex/plexrefine.c
/petsc/src/dm/impls/plex/plexreorder.c
/petsc/src/dm/impls/plex/plexsubmesh.c
/petsc/src/dm/impls/plex/plextree.c
/petsc/src/dm/impls/plex/plexvtk.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmget.c
/petsc/src/docs/website/petsc-20.html
/petsc/src/ksp/ksp/examples/tests/ex10.c
/petsc/src/ksp/ksp/examples/tests/ex11.c
/petsc/src/ksp/ksp/examples/tests/ex30.c
/petsc/src/ksp/ksp/examples/tests/ex32.c
/petsc/src/ksp/ksp/examples/tests/ex4.c
/petsc/src/ksp/ksp/examples/tests/ex43.c
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tutorials/ex10.c
/petsc/src/ksp/ksp/examples/tutorials/ex42.c
/petsc/src/ksp/ksp/examples/tutorials/ex43.c
/petsc/src/ksp/ksp/examples/tutorials/ex46.c
/petsc/src/ksp/ksp/examples/tutorials/ex49.c
/petsc/src/ksp/ksp/examples/tutorials/ex51.c
/petsc/src/ksp/ksp/examples/tutorials/ex56.c
/petsc/src/ksp/ksp/examples/tutorials/ex59.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex46_aijcusp.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex46_aijcusparse.out
/petsc/src/ksp/ksp/impls/cg/cgeig.c
/petsc/src/ksp/ksp/impls/gcr/gcr.c
/petsc/src/ksp/ksp/impls/gmres/borthog2.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/impls/gmres/fgmres/fgmres.c
/petsc/src/ksp/ksp/impls/gmres/gmres.c
/petsc/src/ksp/ksp/impls/gmres/lgmres/lgmres.c
/petsc/src/ksp/ksp/impls/gmres/pgmres/pgmres.c
/petsc/src/ksp/ksp/interface/iguess.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/pc/impls/asm/asm.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddc.h
/petsc/src/ksp/pc/impls/bddc/bddcfetidp.c
/petsc/src/ksp/pc/impls/bddc/bddcgraph.c
/petsc/src/ksp/pc/impls/bddc/bddcnullspace.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bjacobi/bjacobi.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/gasm/gasm.c
/petsc/src/ksp/pc/impls/is/nn/nn.c
/petsc/src/ksp/pc/impls/is/pcis.c
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/ksp/pc/impls/parms/parms.c
/petsc/src/ksp/pc/impls/redistribute/redistribute.c
/petsc/src/ksp/pc/impls/tfs/tfs.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/coarsen/impls/hem/hem.c
/petsc/src/mat/color/impls/minpack/color.c
/petsc/src/mat/color/impls/natural/natural.c
/petsc/src/mat/color/utils/bipartite.c
/petsc/src/mat/color/utils/valid.c
/petsc/src/mat/examples/tests/ex116.c
/petsc/src/mat/examples/tests/ex118.c
/petsc/src/mat/examples/tests/ex120.c
/petsc/src/mat/examples/tests/ex129.c
/petsc/src/mat/examples/tests/ex144.c
/petsc/src/mat/examples/tests/ex146.c
/petsc/src/mat/examples/tests/ex152.c
/petsc/src/mat/examples/tests/ex32.c
/petsc/src/mat/examples/tests/ex99.c
/petsc/src/mat/examples/tutorials/ex12.c
/petsc/src/mat/examples/tutorials/ex5.c
/petsc/src/mat/impls/adj/mpi/mpiadj.c
/petsc/src/mat/impls/aij/mpi/clique/clique.cxx
/petsc/src/mat/impls/aij/mpi/crl/mcrl.c
/petsc/src/mat/impls/aij/mpi/fdmpiaij.c
/petsc/src/mat/impls/aij/mpi/mmaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpicusp/mpiaijcusp.cu
/petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/aij/mpi/mpiov.c
/petsc/src/mat/impls/aij/mpi/mpiptap.c
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/mpi/pastix/pastix.c
/petsc/src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aijfact.c
/petsc/src/mat/impls/aij/seq/bas/basfactor.c
/petsc/src/mat/impls/aij/seq/bas/spbas.c
/petsc/src/mat/impls/aij/seq/csrperm/csrperm.c
/petsc/src/mat/impls/aij/seq/essl/essl.c
/petsc/src/mat/impls/aij/seq/ij.c
/petsc/src/mat/impls/aij/seq/inode.c
/petsc/src/mat/impls/aij/seq/lusol/lusol.c
/petsc/src/mat/impls/aij/seq/matlab/aijmatlab.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c
/petsc/src/mat/impls/aij/seq/seqcusp/aijcusp.cu
/petsc/src/mat/impls/aij/seq/seqcusp/cuspmatimpl.h
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/aij/seq/superlu/superlu.c
/petsc/src/mat/impls/aij/seq/symtranspose.c
/petsc/src/mat/impls/aij/seq/umfpack/umfpack.c
mpi/baijov.c
mpi/mmbaij.c
mpi/mpibaij.c
seq/baij.c
seq/baij2.c
seq/baijfact.c
seq/baijfact2.c
seq/baijfact3.c
/petsc/src/mat/impls/cufft/cufft.cu
/petsc/src/mat/impls/dense/mpi/mmdense.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/elemental/matelem.cxx
/petsc/src/mat/impls/fft/fftw/fftw.c
/petsc/src/mat/impls/is/matis.c
/petsc/src/mat/impls/maij/maij.c
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/mpi/sbaijov.c
/petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij2.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact2.c
/petsc/src/mat/impls/shell/shellcnv.c
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/order/sorder.c
/petsc/src/mat/partition/impls/chaco/chaco.c
/petsc/src/mat/partition/impls/party/party.c
/petsc/src/mat/partition/impls/scotch/scotch.c
/petsc/src/mat/partition/partition.c
/petsc/src/mat/utils/axpy.c
/petsc/src/mat/utils/pheap.c
/petsc/src/snes/examples/tutorials/ex30.c
/petsc/src/snes/examples/tutorials/ex5s.c
/petsc/src/snes/impls/composite/snescomposite.c
/petsc/src/snes/impls/ms/ms.c
/petsc/src/snes/impls/multiblock/multiblock.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/vi/rs/virs.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesj2.c
/petsc/src/snes/interface/snesut.c
/petsc/src/sys/classes/draw/interface/draw.c
/petsc/src/sys/classes/draw/utils/hists.c
/petsc/src/sys/classes/viewer/impls/ascii/filev.c
/petsc/src/sys/classes/viewer/impls/binary/binv.c
/petsc/src/sys/dll/reg.c
/petsc/src/sys/error/fp.c
/petsc/src/sys/fileio/fretrieve.c
/petsc/src/sys/fileio/ftest.c
/petsc/src/sys/ftn-custom/zutils.c
/petsc/src/sys/objects/aoptions.c
/petsc/src/sys/objects/fcallback.c
/petsc/src/sys/objects/options.c
/petsc/src/sys/objects/pname.c
/petsc/src/sys/objects/prefix.c
/petsc/src/sys/objects/subcomm.c
/petsc/src/sys/objects/tagm.c
/petsc/src/sys/threadcomm/examples/tutorials/ex2.c
/petsc/src/sys/threadcomm/interface/threadcomm.c
/petsc/src/sys/utils/ctable.c
/petsc/src/sys/utils/mpimesg.c
/petsc/src/sys/utils/mpiu.c
/petsc/src/sys/utils/str.c
/petsc/src/sys/yaml/yamlimpls.c
/petsc/src/tao/constrained/impls/ipm/ipm.c
/petsc/src/tao/interface/fdiff.c
/petsc/src/tao/leastsquares/impls/pounders/pounders.c
/petsc/src/tao/pde_constrained/examples/tutorials/elliptic.c
/petsc/src/tao/unconstrained/impls/neldermead/neldermead.c
/petsc/src/ts/characteristic/impls/da/slda.c
/petsc/src/ts/characteristic/interface/characteristic.c
/petsc/src/ts/event/tsevent.c
/petsc/src/ts/examples/tests/ex10.c
/petsc/src/ts/examples/tests/ex22.c
/petsc/src/ts/examples/tests/ex3.c
/petsc/src/vec/is/ao/impls/basic/aobasic.c
/petsc/src/vec/is/ao/impls/mapping/aomapping.c
/petsc/src/vec/is/ao/impls/memscalable/aomemscalable.c
/petsc/src/vec/is/is/utils/f90-custom/ziscoloringf90.c
/petsc/src/vec/is/is/utils/ftn-custom/ziscoloringf.c
/petsc/src/vec/is/is/utils/iscoloring.c
/petsc/src/vec/is/is/utils/isdiff.c
/petsc/src/vec/is/sf/impls/basic/sfbasic.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/is/utils/pmap.c
/petsc/src/vec/is/utils/vsectionis.c
/petsc/src/vec/vec/examples/tests/ex24.c
/petsc/src/vec/vec/examples/tutorials/ex9.c
/petsc/src/vec/vec/impls/mpi/pbvec.c
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/interface/f90-custom/zvectorf90.c
/petsc/src/vec/vec/utils/matlab/gcreatev.c
/petsc/src/vec/vec/utils/vinv.c
/petsc/systems/Apple/OSX/bin/makeall
/petsc/systems/Apple/iOS/PETSc/PETSc.xcodeproj/project.pbxproj
/petsc/systems/Apple/iOS/bin/arch-ios-simulator.py
/petsc/systems/Apple/iOS/bin/iosbuilder.py
/petsc/systems/Apple/iOS/bin/makeall
/petsc/tutorials/HandsOnExercise.html
f361c04d15-Nov-2014 Barry Smith <bsmith@mcs.anl.gov>

Memory allocation error where space is allocated MatMult_SeqBAIJ with a space shorter than that needed in MatSOR_SeqBAIJ

Reported-by: Stephan Kramer <s.kramer@imperial.ac.uk>

ab78454214-Nov-2014 Hong Zhang <hzhang@mcs.anl.gov>

bugfix of MatAXPY() with case SUBSET_NONZERO_PATTERN for sbaij matrix, see report by Jose Roman, Nov 11, 2014
This is on master branch (same fix was done on maint) to avoid too much conflict with mai

bugfix of MatAXPY() with case SUBSET_NONZERO_PATTERN for sbaij matrix, see report by Jose Roman, Nov 11, 2014
This is on master branch (same fix was done on maint) to avoid too much conflict with maint

show more ...


/petsc/bin/petscnagupgrade.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/BlasLapack.py
/petsc/config/BuildSystem/config/packages/cuda.py
/petsc/config/BuildSystem/config/packages/cusp.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/PETSc/options/arch.py
/petsc/include/petscblaslapack.h
/petsc/include/petscmat.h
/petsc/src/dm/interface/dm.c
/petsc/src/docs/website/petsc-20.html
/petsc/src/ksp/ksp/examples/tests/ex43.c
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tutorials/ex46.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex46_aijcusp.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex46_aijcusparse.out
/petsc/src/ksp/ksp/impls/cg/cgeig.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddc.h
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/impls/aij/mpi/clique/clique.cxx
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpicusp/mpiaijcusp.cu
/petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/mpi/pastix/pastix.c
/petsc/src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/essl/essl.c
/petsc/src/mat/impls/aij/seq/lusol/lusol.c
/petsc/src/mat/impls/aij/seq/matlab/aijmatlab.c
/petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c
/petsc/src/mat/impls/aij/seq/seqcusp/aijcusp.cu
/petsc/src/mat/impls/aij/seq/seqcusp/cuspmatimpl.h
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/aij/seq/superlu/superlu.c
/petsc/src/mat/impls/aij/seq/umfpack/umfpack.c
mpi/mpibaij.c
seq/baij.c
/petsc/src/mat/impls/elemental/matelem.cxx
/petsc/src/mat/impls/is/matis.c
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/utils/axpy.c
/petsc/src/snes/interface/snesj2.c
/petsc/src/sys/objects/pname.c
/petsc/src/tao/interface/fdiff.c
/petsc/src/vec/vec/utils/matlab/gcreatev.c
7b2ba04b14-Nov-2014 Hong Zhang <hzhang@mcs.anl.gov>

bugfix of MatAXPY() with case SUBSET_NONZERO_PATTERN for sbaij matrix, see report by Jose Roman, Nov 11, 2014

3059b6fa13-Nov-2014 Barry Smith <bsmith@mcs.anl.gov>

Allow setting the matrix block size with MatSetBlockSize() before calling MatLoad()

Reported-by: Steena M <stm8086@yahoo.com>

42c9c57c07-Nov-2014 Barry Smith <bsmith@mcs.anl.gov>

Moved registration of MatSolverPackages out of MatCreate_XXX routines into standalone system, this allows
1) more precise error message when a requested solver is not found
2) easier to add new solve

Moved registration of MatSolverPackages out of MatCreate_XXX routines into standalone system, this allows
1) more precise error message when a requested solver is not found
2) easier to add new solvers without touching basic PETSc matrix implementation files and the possibility of adding new solvers to the library after PETSc is installed or even at run time

show more ...


/petsc/bin/maint/generateetags.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/cuda.py
/petsc/config/BuildSystem/config/packages/hwloc.py
/petsc/config/BuildSystem/config/packages/hypre.py
/petsc/config/BuildSystem/config/packages/sowing.py
/petsc/config/PETSc/Configure.py
/petsc/include/petscmat.h
/petsc/src/dm/impls/da/dagetarray.c
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/mat/examples/tests/ex48.c
/petsc/src/mat/impls/aij/mpi/clique/clique.cxx
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/mpi/pastix/pastix.c
/petsc/src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aijfact.c
/petsc/src/mat/impls/aij/seq/essl/essl.c
/petsc/src/mat/impls/aij/seq/lusol/lusol.c
/petsc/src/mat/impls/aij/seq/matlab/aijmatlab.c
/petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c
/petsc/src/mat/impls/aij/seq/seqcusp/aijcusp.cu
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/aij/seq/superlu/superlu.c
/petsc/src/mat/impls/aij/seq/umfpack/umfpack.c
mpi/mpibaij.c
seq/baij.c
seq/baijfact.c
/petsc/src/mat/impls/dense/mpi/mpidense.h
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/elemental/matelem.cxx
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/matrix.c
/petsc/src/sys/error/signal.c
/petsc/src/ts/impls/implicit/sundials/sundials.c
6c30de3e03-Nov-2014 Hong Zhang <hzhang@mcs.anl.gov>

Merge branch 'hzhang/mat-redundant_sbaij'


/petsc/config/BuildSystem/config/packages/ml.py
/petsc/config/BuildSystem/config/packages/p4est.py
/petsc/config/builder.py
/petsc/include/finclude/petscmat.h
/petsc/include/finclude/petscpc.h
/petsc/include/finclude/petscpcdef.h
/petsc/include/petsc-private/dmpleximpl.h
/petsc/include/petsc-private/matimpl.h
/petsc/include/petsc-private/pcimpl.h
/petsc/include/petsc-private/petscfeimpl.h
/petsc/include/petscdmplex.h
/petsc/include/petscerror.h
/petsc/include/petscfe.h
/petsc/include/petscksp.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/include/petsctao.h
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/examples/tests/output/ex16_1.out
/petsc/src/dm/examples/tests/output/ex16_2.out
/petsc/src/dm/impls/da/dalocal.c
/petsc/src/dm/impls/plex/examples/tests/ex1.c
/petsc/src/dm/impls/plex/examples/tests/makefile
/petsc/src/dm/impls/plex/examples/tests/output/ex1_13.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_14.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_6.out
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/plex/plexfem.c
/petsc/src/dm/impls/plex/plexgenerate.c
/petsc/src/dm/impls/plex/plexgeometry.c
/petsc/src/dm/impls/plex/plexrefine.c
/petsc/src/dm/interface/dmi.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/ksp/examples/tests/ex25.c
/petsc/src/ksp/ksp/examples/tests/ex37.c
/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tutorials/ex52.c
/petsc/src/ksp/ksp/examples/tutorials/ex7.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex5_redundant.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex5_redundant_0.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex7_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex7_2.out
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/utils/dmproject.c
/petsc/src/ksp/ksp/utils/schurm.c
/petsc/src/ksp/pc/impls/asm/asm.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddc.h
/petsc/src/ksp/pc/impls/bddc/bddcfetidp.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.h
/petsc/src/ksp/pc/impls/bddc/bddcstructs.h
/petsc/src/ksp/pc/impls/composite/composite.c
/petsc/src/ksp/pc/impls/eisens/eisen.c
/petsc/src/ksp/pc/impls/factor/cholesky/cholesky.c
/petsc/src/ksp/pc/impls/factor/factimpl.c
/petsc/src/ksp/pc/impls/factor/factor.c
/petsc/src/ksp/pc/impls/factor/factor.h
/petsc/src/ksp/pc/impls/factor/icc/icc.c
/petsc/src/ksp/pc/impls/factor/ilu/ilu.c
/petsc/src/ksp/pc/impls/factor/lu/lu.c
/petsc/src/ksp/pc/impls/gamg/classical.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/gamg.h
/petsc/src/ksp/pc/impls/is/pcis.c
/petsc/src/ksp/pc/impls/jacobi/jacobi.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/redundant/redundant.c
/petsc/src/ksp/pc/impls/sor/sor.c
/petsc/src/ksp/pc/impls/svd/svd.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/examples/tests/ex169.c
/petsc/src/mat/examples/tests/ex86.c
/petsc/src/mat/examples/tests/ex87.c
/petsc/src/mat/examples/tests/ex9.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex139_1.out
/petsc/src/mat/examples/tests/output/ex86_1.out
/petsc/src/mat/examples/tests/output/ex86_2.out
/petsc/src/mat/examples/tests/output/ex86_3.out
/petsc/src/mat/examples/tests/output/ex9_3_baij.out
/petsc/src/mat/examples/tests/output/ex9_3_sbaij.out
/petsc/src/mat/examples/tests/output/ex9_4_baij.out
/petsc/src/mat/examples/tests/output/ex9_4_sbaij.out
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.h
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
mpi/mpibaij.c
mpi/mpibaij.h
seq/baij.c
seq/baij.h
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.h
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tutorials/ex66.c
/petsc/src/snes/examples/tutorials/network/pflow/PFReadData.c
/petsc/src/snes/examples/tutorials/network/pflow/pf.c
/petsc/src/snes/examples/tutorials/output/ex15_lag_jac.out
/petsc/src/snes/examples/tutorials/output/ex15_lag_pc.out
/petsc/src/snes/impls/fas/fasfunc.c
/petsc/src/snes/linesearch/impls/bt/linesearchbt.c
/petsc/src/sys/classes/viewer/impls/mathematica/mathematica.c
/petsc/src/sys/classes/viewer/impls/matlab/vmatlab.c
/petsc/src/tao/interface/taosolver.c
/petsc/src/tao/unconstrained/impls/nls/nls.c
/petsc/src/tao/unconstrained/impls/ntl/ntl.c
/petsc/src/tao/unconstrained/impls/ntr/ntr.c
/petsc/src/ts/impls/pseudo/posindep.c
/petsc/src/vec/is/ao/impls/mapping/aomapping.c
/petsc/systems/Apple/OSX/bin/makeframework
/petsc/tutorials/HandsOnExercise.html
a593226b29-Oct-2014 Hong Zhang <hzhang@mcs.anl.gov>

call MatDestroy_Redundant from MatDestroy() instead of from MatDestroy_XXX()

bd153df028-Oct-2014 Hong Zhang <hzhang@mcs.anl.gov>

merge MatCreateMPIAIJConcatenateSeqBAIJSymbolic and xxxNumeric into MatCreateMPIMatConcatenateSeqMat_MPIBAIJ()

aae456db28-Oct-2014 Hong Zhang <hzhang@mcs.anl.gov>

rm MatGetRedundantMatrix_xxx()

2c7591d024-Oct-2014 Hong Zhang <hzhang@mcs.anl.gov>

fix block size; intend to unify MatGetRedundantMatrix_XXX to MatGetRedundantMatrix()

083095a123-Oct-2014 Hong Zhang <hzhang@mcs.anl.gov>

delete MatGetRedundantMatrix_MPIAIJ_interlaced() because it does not do better than MatGetRedundantMatrix_MPIAIJ() with psubcomm_type interlaced

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