seq - OpenGrok history log for /petsc/src/mat/impls/dense/seq

Revision	Date	Author	Comments (<<< Hide modified files) (Show modified files >>>)
7f489da9	11-Jun-2018	Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>	MatLoad_*: check viewer type at impl level /petsc/CODE_OF_CONDUCT.md /petsc/Jenkinsfile /petsc/config/BuildSystem/RDict.py /petsc/config/BuildSystem/config/atomics.py /petsc/config/BuildSystem/config/base.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/functions.py /petsc/config/BuildSystem/config/headers.py /petsc/config/BuildSystem/config/libraries.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/Chaco.py /petsc/config/BuildSystem/config/packages/Chombo.py /petsc/config/BuildSystem/config/packages/CoDiPack.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/PTScotch.py 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e9e4f4a6	05-Sep-2018	Richard Tran Mills <rmills@rmills.org>	Add missing composed functions for seqaijsell_seqdense operations. /petsc/Jenkinsfile /petsc/config/BuildSystem/config/base.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/functions.py /petsc/config/BuildSystem/config/libraries.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/ADIOS.py /petsc/config/BuildSystem/config/packages/ADIOS2.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/CoDiPack.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/PTScotch.py /petsc/config/BuildSystem/config/packages/SuperLU.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/Trilinos.py /petsc/config/BuildSystem/config/packages/adblaslapack.py 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715b7558	31-Aug-2018	Barry Smith <bsmith@mcs.anl.gov>	MatDenseRestoreArrayRead_C was not properly registered for SeqDense matrix (The Read was missing) Commit-type: bug-fix Reported-by: Marius Buerkle <mbuerkle@web.de> /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/functions.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/MOAB.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/BuildSystem/config/packages/cmake.py /petsc/config/BuildSystem/config/packages/hdf5.py /petsc/config/BuildSystem/config/packages/netcdf.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/BuildSystem/config/packages/sowing.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/options/sharedLibraries.py /petsc/config/examples/arch-osx-pgi-pkgs-opt.py /petsc/gmakefile /petsc/gmakefile.test /petsc/include/petsc/finclude/petscsys.h 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/petsc/src/ts/examples/tutorials/power_grid/ex3sa.c /petsc/src/ts/examples/tutorials/power_grid/output/ex3sa_3.out /petsc/src/ts/impls/explicit/rk/rk.c /petsc/src/ts/interface/ts.c /petsc/src/ts/interface/tssen.c /petsc/src/vec/is/is/impls/general/general.c /petsc/src/vec/is/is/interface/index.c /petsc/src/vec/is/is/utils/isblock.c /petsc/src/vec/is/is/utils/iscoloring.c /petsc/src/vec/is/utils/pmap.c /petsc/src/vec/vec/examples/tests/output/ex32f_1.out /petsc/src/vec/vec/examples/tests/output/ex41_1.out /petsc/src/vec/vec/examples/tutorials/ex21.c /petsc/src/vec/vec/examples/tutorials/output/ex4f_1.out
2847e3fd	17-May-2018	Stefano Zampini <stefano.zampini@gmail.com>	Mat: MAT_INPLACE_MATRIX can be used for transposition with rectangular matrices Added a couple of tests /petsc/.gitignore /petsc/.travis.yml /petsc/bitbucket-pipelines.yml /petsc/config/BuildSystem/RDict.py /petsc/config/BuildSystem/args.py /petsc/config/BuildSystem/config/base.py /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/functions.py /petsc/config/BuildSystem/config/libraries.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/Chaco.py /petsc/config/BuildSystem/config/packages/Chombo.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/Matlab.py /petsc/config/BuildSystem/config/packages/MatlabEngine.py 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0bbffbc0	27-Mar-2018	Karl Rupp <me@karlrupp.net>	Merge branch 'stefano_zampini/fix-matis-dmda-l2g' /petsc/.travis.yml /petsc/bitbucket-pipelines.yml /petsc/config/BuildSystem/config/packages/ctetgen.py /petsc/config/BuildSystem/config/packages/mkl_sparse_sp2m.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/options/installDir.py /petsc/config/PETSc/options/petscdir.py /petsc/config/examples/arch-cray-xc40-knl-opt.py /petsc/config/examples/arch-linux-knl.py /petsc/config/gmakegentest.py /petsc/config/install.py /petsc/include/petsc/private/dmdaimpl.h /petsc/include/petsc/private/dmimpl.h /petsc/include/petsc/private/dmswarmimpl.h /petsc/include/petsc/private/kspimpl.h /petsc/include/petsc/private/sfimpl.h /petsc/include/petscdmda.h /petsc/include/petscdmplex.h /petsc/include/petscksp.h /petsc/include/petscsf.h /petsc/include/petsctao.h /petsc/include/petscversion.h /petsc/lib/petsc/bin/maint/builddist 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d528f656	21-Mar-2018	Jakub Kruzik <jakub.kruzik@vsb.cz>	MatCreateMPIMatConcatenateSeqMat_SeqDense impl /petsc/.gitignore /petsc/.travis.yml /petsc/config/BuildSystem/RDict.py /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/packages/cuda.py /petsc/config/BuildSystem/config/packages/cusp.py /petsc/config/BuildSystem/config/packages/elemental.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/options/arch.py /petsc/config/PETSc/options/installDir.py /petsc/config/configure.py /petsc/config/examples/arch-cuda-double.py /petsc/config/examples/arch-cuda-single.py /petsc/config/install.py /petsc/include/petsc/private/dmimpl.h /petsc/include/petsc/private/kernels/petscaxpy.h /petsc/include/petsc/private/pcmgimpl.h /petsc/include/petsc/private/tsimpl.h /petsc/include/petscdm.h /petsc/include/petscdmplex.h /petsc/include/petscis.h /petsc/include/petscmat.h 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18927118	05-Mar-2018	Karl Rupp <me@karlrupp.net>	Merge branch 'hongzh/change-vecarray-to-mat-tlm' * hongzh/change-vecarray-to-mat-tlm: Uses a dense array instead of multiple vectors to store TLM sensitivity and removes TSForwardSetRHSJacobianP (us Merge branch 'hongzh/change-vecarray-to-mat-tlm' * hongzh/change-vecarray-to-mat-tlm: Uses a dense array instead of multiple vectors to store TLM sensitivity and removes TSForwardSetRHSJacobianP (use TSAdjointSetRHSJacobian instead). show more ... /petsc/bitbucket-pipelines.yml /petsc/config/BuildSystem/config/base.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/exodusii.py 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af53bab2	27-Feb-2018	Hong Zhang <hongzhang@anl.gov>	Improve naming and doc Funded-by: Project: FASTMATH Time: 0.5 hours Reported-by: Thanks-to: /petsc/include/petsc/private/tsimpl.h /petsc/include/petscts.h /petsc/src/mat/impls/dense/mpi/mpidense.c dense.c /petsc/src/ts/examples/tutorials/ex20adj.c /petsc/src/ts/examples/tutorials/ex20fwd.c /petsc/src/ts/examples/tutorials/hybrid/ex1fwd.c /petsc/src/ts/examples/tutorials/output/ex20fwd_1.out /petsc/src/ts/examples/tutorials/power_grid/ex3opt.c /petsc/src/ts/examples/tutorials/power_grid/ex3sa.c /petsc/src/ts/examples/tutorials/power_grid/makefile /petsc/src/ts/examples/tutorials/power_grid/output/ex3sa_1.out /petsc/src/ts/examples/tutorials/power_grid/output/ex3sa_2.out /petsc/src/ts/impls/implicit/theta/theta.c /petsc/src/ts/interface/ts.c /petsc/src/ts/interface/tsfwdsen.c
00121966	18-Feb-2018	Stefano Zampini <stefano.zampini@gmail.com>	MATSEQDENSE: extend support for MatTransposeSolve fix POTR case, add HETR Added test /petsc/bin/maint/buildtest /petsc/bin/maint/confignightly/cg /petsc/bin/maint/confignightly/cg2 /petsc/bin/maint/confignightly/cg3 /petsc/bin/maint/confignightly/cg4 /petsc/bin/maint/confignightly/churn /petsc/bin/maint/confignightly/churn2 /petsc/bin/maint/confignightly/churn3 /petsc/bin/maint/confignightly/crank /petsc/bin/maint/confignightly/crank2 /petsc/bin/maint/confignightly/crank3 /petsc/bin/maint/confignightly/crush /petsc/bin/maint/confignightly/crush2 /petsc/bin/maint/confignightly/crush3 /petsc/bin/maint/confignightly/default /petsc/bin/maint/confignightly/el6 /petsc/bin/maint/confignightly/el6-2 /petsc/bin/maint/confignightly/el6-3 /petsc/bin/maint/confignightly/el6-4 /petsc/bin/maint/confignightly/es /petsc/bin/maint/confignightly/es2 /petsc/bin/maint/confignightly/es3 /petsc/bin/maint/confignightly/es4 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86aefd0d	01-Feb-2018	Hong Zhang <hongzhang@anl.gov>	Add MatDenseGetColumn and MatDenseRestoreColumn This allows one to modify a column of a dense matrix. 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542ff2ea	30-Jan-2018	Barry Smith <bsmith@mcs.anl.gov>	Merge branch 'barry/fix-matdensegetarray' /petsc/.mailmap /petsc/bin/maint/buildtest /petsc/bin/maint/confignightly/steamroller3 /petsc/bin/maint/examplesMkParse.py /petsc/bin/maint/runhtml.py /petsc/bin/maint/testharness_util.py /petsc/bin/maint/wwwindex.py /petsc/bin/petsc_gen_xdmf.py /petsc/bin/petscdiff /petsc/bin/petscmpiexec /petsc/config/BuildSystem/config/base.py /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/headers.py /petsc/config/BuildSystem/config/libraries.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/OpenMPI.py /petsc/config/BuildSystem/config/packages/Trilinos.py 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3bffc371	26-Jan-2018	Barry Smith <bsmith@mcs.anl.gov>	Error in SOR for dense matrices, BLASdot() uses the complex-conjugate transpose This is not appropriate for applying lower triangular rows of the matrix to the current partial solution Commit-type: Error in SOR for dense matrices, BLASdot() uses the complex-conjugate transpose This is not appropriate for applying lower triangular rows of the matrix to the current partial solution Commit-type: bug-fix Reported-by: Vinh Pham-Xuan <vinh.phamxuan2@mail.dcu.ie> show more ... /petsc/bin/maint/confignightly/default /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/libraries.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/exodusii.py /petsc/config/BuildSystem/config/packages/hwloc.py /petsc/config/BuildSystem/config/packages/mkl_cpardiso.py /petsc/config/BuildSystem/config/packages/mkl_pardiso.py /petsc/config/BuildSystem/config/packages/mkl_sparse.py 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8572280a	18-Jan-2018	Barry Smith <bsmith@mcs.anl.gov>	Introduce MatDenseGetArrayRead(), add object state update to MatDenseGetArray(), adding missing MatDenseRestoreArray() to MKL_CPardiso Commit-type: bug-fix, feature Reported-by: Pierre Jolivet <Pier Introduce MatDenseGetArrayRead(), add object state update to MatDenseGetArray(), adding missing MatDenseRestoreArray() to MKL_CPardiso Commit-type: bug-fix, feature Reported-by: Pierre Jolivet <Pierre.Jolivet@enseeiht.fr> show more ... /petsc/.mailmap /petsc/bin/maint/buildtest /petsc/bin/maint/confignightly/default /petsc/bin/maint/confignightly/steamroller3 /petsc/bin/maint/examplesMkParse.py /petsc/bin/maint/runhtml.py /petsc/bin/maint/testharness_util.py /petsc/bin/petsc_gen_xdmf.py /petsc/bin/petscmpiexec /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/headers.py 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5ac36cfc	04-Oct-2017	Barry Smith <bsmith@mcs.anl.gov>	Fix bug in sequential dense multiply and transpose multiply with zero rows or columns Routines just returned instead of zeroing output vector Commit-type: bug-fix Reported-by: Florian Lindner <mail Fix bug in sequential dense multiply and transpose multiply with zero rows or columns Routines just returned instead of zeroing output vector Commit-type: bug-fix Reported-by: Florian Lindner <mailinglists@xgm.de> show more ... /petsc/.travis.yml /petsc/README.md /petsc/bin/PetscBinaryIO.py /petsc/bin/maint/branches.py /petsc/bin/maint/builddist /petsc/bin/maint/buildtest /petsc/bin/maint/confignightly/churn /petsc/bin/maint/confignightly/crank3 /petsc/bin/maint/confignightly/el6 /petsc/bin/maint/confignightly/knl /petsc/bin/maint/confignightly/knl2 /petsc/bin/maint/confignightly/ps4 /petsc/bin/maint/confignightly/ps4-3 /petsc/bin/maint/confignightly/ps4-5 /petsc/bin/maint/confignightly/wii /petsc/bin/maint/confignightly/wii3 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96e6d5c4	10-Aug-2017	Richard Tran Mills <rmills@rmills.org>	Associated seqaijmkl_seqdense_C functions. /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/mkl_sparse_optimize.py /petsc/include/petsc/finclude/petscmat.h /petsc/include/petscmat.h /petsc/src/ksp/ksp/examples/tutorials/makefile /petsc/src/mat/impls/aij/mpi/aijmkl/makefile /petsc/src/mat/impls/aij/mpi/aijmkl/mpiaijmkl.c /petsc/src/mat/impls/aij/mpi/makefile /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/aij.h /petsc/src/mat/impls/aij/seq/aijmkl/aijmkl.c /petsc/src/mat/impls/aij/seq/aijmkl/aijmkl.h /petsc/src/mat/impls/aij/seq/aijmkl/makefile /petsc/src/mat/impls/aij/seq/makefile dense.c /petsc/src/mat/interface/dlregismat.c /petsc/src/mat/interface/matregis.c /petsc/src/snes/examples/tutorials/makefile
4099cc6b	18-Jul-2017	Barry Smith <bsmith@mcs.anl.gov>	Add subtype concept to SeqAIJ matrices Introduced -mat_seqaij_type <seqaijperm, ...> MatSeqAIJSetType() to allow running code written for AIJ to work with any subtype. See MatSeqAIJRegister() and Ma Add subtype concept to SeqAIJ matrices Introduced -mat_seqaij_type <seqaijperm, ...> MatSeqAIJSetType() to allow running code written for AIJ to work with any subtype. See MatSeqAIJRegister() and MatSeqAIJRegisterAll() for registering new subtypes Use export PETSC_OPTIONS="-mat_seqaij_type seqaijperm -malloc_test" make alltests to run the entire test suite using an alternative subclass, in this case seqaijperm. This will produce output regarding the different name for the matrix class but otherwise should produce no errors. This was implemented to 1) allow easy testing of an MKL subtype and 2) to allow users to easily use the MKL subtype without changing their code. Also fixes several bugs in seqaijperm, if it isn't tested its broken. Commit-type: testing-fix,style-fix, feature Funded-by: ECP Project: MKL Time: 32 hours Reported-by: Irina Sokolova <irina.sokolova@intel.com> show more ... /petsc/.gitmessage /petsc/bin/maint/builddist /petsc/bin/maint/exampleslog.py /petsc/bin/maint/htmltemplate.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/examples/arch-cray-xc40-knl-opt.py /petsc/config/gmakegentest.py /petsc/include/petsc/finclude/petscsys.h /petsc/include/petsc/private/dmnetworkimpl.h /petsc/include/petsc/private/matimpl.h /petsc/include/petscdmnetwork.h /petsc/include/petscksp.h /petsc/include/petscmat.h /petsc/include/petscsys.h /petsc/makefile /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/examples/tutorials/ex11f90.F90 /petsc/src/dm/examples/tutorials/ex13f90.F90 /petsc/src/dm/impls/network/network.c /petsc/src/dm/impls/network/networkcreate.c /petsc/src/dm/impls/plex/examples/tests/ex1f90.F90 /petsc/src/dm/impls/plex/examples/tests/ex22.c /petsc/src/dm/impls/plex/examples/tests/ex2f90.F90 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cdc753b6	30-Jun-2017	Barry Smith <bsmith@mcs.anl.gov>	MatCopy implementations need to update the state since values have changed Commit-type: bug-fix Development Tools: Vim, Emacs, Eclipse /petsc/.gitmessage /petsc/bin/petscnagupgrade.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/packages/metis.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/petsc.py /petsc/config/gmakegentest.py /petsc/config/petsc_harness.sh /petsc/config/testparse.py /petsc/gmakefile /petsc/include/petsc/private/dmimpl.h /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petsc/private/petscfeimpl.h /petsc/include/petscdm.h /petsc/include/petscdmplex.h /petsc/include/petscfe.h /petsc/include/petsclog.h /petsc/include/petscpc.h /petsc/include/petscsys.h /petsc/include/petscts.h /petsc/include/petscversion.h /petsc/lib/petsc/conf/test /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/examples/tutorials/ex13f90.F90 /petsc/src/dm/examples/tutorials/ex51.c 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/petsc/src/vec/vec/utils/vecio.c
3661b464	25-Jun-2017	Satish Balay <balay@mcs.anl.gov>	Merge remote-tracking branch 'origin/barry/update-petscfileretrieve' /petsc/.gitignore /petsc/config/BuildSystem/config/packages/tchem.py /petsc/include/petsc/private/tsimpl.h /petsc/include/petscmat.h /petsc/include/petscpc.h /petsc/include/petscpctypes.h /petsc/include/petscsnes.h /petsc/lib/petsc/conf/test /petsc/src/docs/tex/manual/part2.tex /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/ksp/examples/tutorials/ex10.c /petsc/src/ksp/pc/examples/tests/ex5.c /petsc/src/ksp/pc/impls/asm/asm.c /petsc/src/ksp/pc/impls/mg/mg.c /petsc/src/ksp/pc/impls/mg/mgfunc.c /petsc/src/mat/f90-mod/petscmat.h90 /petsc/src/mat/impls/aij/mpi/fdmpiaij.c dense.c /petsc/src/mat/interface/dlregismat.c /petsc/src/mat/matfd/fdmatrix.c /petsc/src/mat/matfd/ftn-custom/zfdmatrixf.c /petsc/src/snes/examples/tests/ex1f.F90 /petsc/src/snes/examples/tests/makefile /petsc/src/snes/examples/tests/output/ex1f_3.out /petsc/src/snes/examples/tutorials/makefile /petsc/src/snes/impls/composite/snescomposite.c /petsc/src/snes/interface/snes.c /petsc/src/snes/interface/snesut.c /petsc/src/snes/linesearch/impls/bt/linesearchbt.c /petsc/src/sys/classes/viewer/impls/ascii/filev.c /petsc/src/sys/examples/tutorials/ex18.c /petsc/src/sys/examples/tutorials/makefile /petsc/src/sys/examples/tutorials/output/ex18_1.out /petsc/src/sys/fileio/fretrieve.c /petsc/src/sys/objects/inherit.c /petsc/src/sys/utils/str.c /petsc/src/ts/adapt/impls/basic/adaptbasic.c /petsc/src/ts/adapt/interface/tsadapt.c /petsc/src/ts/examples/tutorials/chem_meth_ethanol.inp /petsc/src/ts/examples/tutorials/extchem.c /petsc/src/ts/examples/tutorials/extchem.example.1 /petsc/src/ts/examples/tutorials/extchem.sh /petsc/src/ts/examples/tutorials/gasoline.inp /petsc/src/ts/examples/tutorials/h2_10sp.inp /petsc/src/ts/examples/tutorials/meth_ethanol.inp /petsc/src/ts/examples/tutorials/output/ex8_2.out /petsc/src/ts/examples/tutorials/therm_meth_ethanol.dat /petsc/src/ts/impls/arkimex/arkimex.c /petsc/src/ts/impls/explicit/rk/rk.c /petsc/src/ts/interface/ts.c /petsc/src/vec/is/is/interface/index.c
044f065d	25-Jun-2017	Satish Balay <balay@mcs.anl.gov>	Merge remote-tracking branch 'origin/barry/feature-matdenseplacearray' /petsc/config/BuildSystem/config/packages/mkl_cpardiso.py /petsc/config/BuildSystem/config/packages/mkl_pardiso.py /petsc/config/BuildSystem/config/packages/sundials.py /petsc/config/example_template.py /petsc/config/examples/arch-opensolaris-pkgs-opt.py /petsc/gmakefile /petsc/include/petsc/finclude/petscksp.h /petsc/include/petsc/finclude/petscsnes.h /petsc/include/petsc/mpiuni/mpi.h /petsc/include/petsc/private/dmimpl.h /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petsc/private/fortranimpl.h /petsc/include/petsc/private/kspimpl.h /petsc/include/petsc/private/petscconvestimpl.h /petsc/include/petsc/private/petscdsimpl.h /petsc/include/petsc/private/petscimpl.h /petsc/include/petsc/private/snesimpl.h /petsc/include/petsc/private/tsimpl.h /petsc/include/petscconvest.h /petsc/include/petscdm.h /petsc/include/petscds.h /petsc/include/petscksp.h /petsc/include/petscmat.h /petsc/include/petscpc.h /petsc/include/petscsnes.h /petsc/src/dm/dt/interface/dtds.c /petsc/src/dm/impls/forest/forest.c /petsc/src/dm/impls/network/network.c /petsc/src/dm/impls/plex/examples/tests/ex19.c /petsc/src/dm/impls/plex/examples/tutorials/ex1.c /petsc/src/dm/impls/plex/examples/tutorials/ex1f90.F90 /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/plex/plexadapt.c /petsc/src/dm/impls/plex/plexcoarsen.c /petsc/src/dm/impls/plex/plexcreate.c /petsc/src/dm/impls/plex/plexgenerate.c /petsc/src/dm/impls/plex/plexrefine.c /petsc/src/dm/interface/dm.c /petsc/src/docs/tao_tex/manual/part2b.tex /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/f90-mod/petscksp.h /petsc/src/ksp/ksp/examples/tests/ex53.c /petsc/src/ksp/ksp/examples/tests/makefile /petsc/src/ksp/ksp/examples/tests/output/ex11_1.out /petsc/src/ksp/ksp/examples/tests/output/ex11_2.out /petsc/src/ksp/ksp/examples/tests/output/ex32_cholmod.out 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d3042a70	30-May-2017	Barry Smith <bsmith@mcs.anl.gov>	Add MatDensePlaceArray() and MatDenseResetArray() Commit-type: feature Time: 1.1 hours Reported-by: Pierre Jolivet <pierre.jolivet@enseeiht.fr> /petsc/.gitignore /petsc/.travis.yml /petsc/bin/PetscBinaryIOTrajectory.py /petsc/bin/maint/buildtest /petsc/bin/maint/checkBuilds.py /petsc/bin/maint/runhtml.py /petsc/bin/maint/toclapack.sh /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/libraries.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/Chaco.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/PTScotch.py /petsc/config/BuildSystem/config/packages/SuiteSparse.py /petsc/config/BuildSystem/config/packages/Triangle.py /petsc/config/BuildSystem/config/packages/Trilinos.py 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05709791	26-Apr-2017	Satish Balay <balay@mcs.anl.gov>	fix compile error with mlib build arch-linux-pkgs-cxx-mlib/obj/src/ksp/pc/impls/bddc/bddcschurs.o: In function `PCBDDCSubSchursSetUp(_PCBDDCSubSchurs, _p_Mat, _p_Mat, PetscBool, int, int, int, _ fix compile error with mlib build arch-linux-pkgs-cxx-mlib/obj/src/ksp/pc/impls/bddc/bddcschurs.o: In function `PCBDDCSubSchursSetUp(_PCBDDCSubSchurs, _p_Mat, _p_Mat, PetscBool, int, int, int, _p_Vec, PetscBool, PetscBool, PetscBool, int, int, _p_IS*, _p_Mat, _p_IS*)': /sandbox/petsc/petsc.clone-3/src/ksp/pc/impls/bddc/bddcschurs.c:1302: undefined reference to `MatSeqDenseInvertFactors_Private' /sandbox/petsc/petsc.clone-3/src/ksp/pc/impls/bddc/bddcschurs.c:1316: undefined reference to `MatSeqDenseInvertFactors_Private' /usr/bin/ld: /sandbox/petsc/petsc.clone-3/arch-linux-pkgs-cxx-mlib/lib/libpetscksp.so.3.7.6: hidden symbol `MatSeqDenseInvertFactors_Private' isn't defined show more ... /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/pc/impls/bddc/bddcschurs.c dense.c dense.h /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c /petsc/src/mat/impls/sbaij/seq/sbaij.c /petsc/src/mat/interface/matrix.c
0f8fb01a	13-Apr-2017	Barry Smith <bsmith@mcs.anl.gov>	Added another test case for extchem Switched extchem to use dense matrix since MatSetValues() is much much faster fix outdate MatOptions[] definitions Commit-type: bug-fix, feature, example Funded- Added another test case for extchem Switched extchem to use dense matrix since MatSetValues() is much much faster fix outdate MatOptions[] definitions Commit-type: bug-fix, feature, example Funded-by: IMEX Project: chemistry Time: 3 hours Thanks-to: "Aithal, Shashikant M." <aithal@cels.anl.gov> show more ... /petsc/.travis.yml /petsc/bin/PetscBinaryIOTrajectory.py /petsc/config/BuildSystem/config/libraries.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/Chaco.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/PTScotch.py /petsc/config/BuildSystem/config/packages/SuiteSparse.py 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bd443b22	11-Apr-2017	Stefano Zampini <stefano.zampini@gmail.com>	Mat: allow inplace factorization of the Schur complement /petsc/include/petsc/private/matimpl.h /petsc/include/petscmat.h /petsc/src/ksp/ksp/examples/tutorials/ex59.c /petsc/src/ksp/pc/impls/bddc/bddcschurs.c /petsc/src/mat/f90-mod/petscmat.h /petsc/src/mat/impls/aij/mpi/mumps/mumps.c /petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c dense.c /petsc/src/mat/interface/matrix.c /petsc/src/mat/utils/factorschur.c /petsc/src/mat/utils/makefile
8c178816	10-Apr-2017	Stefano Zampini <stefano.zampini@gmail.com>	MatSeqDense: add internal routine to compute explicitly the inverse from the factors dense.c dense.h
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