ftn-custom - OpenGrok history log for /petsc/src/mat/interface/ftn-custom

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24aa916e	10-Nov-2017	Satish Balay <balay@mcs.anl.gov>	fortran: fix macro redefinition error /petsc/.gitignore /petsc/.gitmessage /petsc/.travis.yml /petsc/README.md /petsc/bin/PetscBinaryIO.py /petsc/bin/PetscBinaryIOTrajectory.py /petsc/bin/maint/branches.py /petsc/bin/maint/builddist /petsc/bin/maint/buildtest /petsc/bin/maint/checkBuilds.py /petsc/bin/maint/confignightly/churn /petsc/bin/maint/confignightly/crank3 /petsc/bin/maint/confignightly/el6 /petsc/bin/maint/confignightly/knl /petsc/bin/maint/confignightly/knl2 /petsc/bin/maint/confignightly/ps4 /petsc/bin/maint/confignightly/ps4-3 /petsc/bin/maint/confignightly/ps4-5 /petsc/bin/maint/confignightly/wii /petsc/bin/maint/confignightly/wii3 /petsc/bin/maint/exampleslog.py /petsc/bin/maint/htmltemplate.py /petsc/bin/maint/runhtml.py /petsc/bin/maint/toclapack.sh /petsc/bin/maint/update-docs.py /petsc/bin/maint/xclude /petsc/bin/petsc_gen_xdmf.py /petsc/bin/petscnagupgrade.py /petsc/config/BuildSystem/RDict.py 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7dae84e0	07-Mar-2017	Hong Zhang <hzhang@mcs.anl.gov>	rename MatGetSubMat -> MatCreateSubMat /petsc/bin/maint/generateetags.py /petsc/bin/petsc_conf.py /petsc/bin/petscdiff /petsc/bin/win32fe/win32fe.exe /petsc/bin/win32fe/win32feutils.dll /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/SuperLU.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/Trilinos.py /petsc/config/BuildSystem/config/packages/alquimia.py /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/BuildSystem/config/packages/metis.py /petsc/config/BuildSystem/config/packages/p4est.py /petsc/config/BuildSystem/config/packages/parmetis.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/BuildSystem/config/packages/pflotran.py /petsc/config/BuildSystem/config/packages/strumpack.py 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de7ef04e	20-Feb-2017	Hong Zhang <hzhang@mcs.anl.gov>	bugfix for matgetmatrices_ /petsc/src/ksp/pc/impls/asm/asm.c /petsc/src/mat/examples/tests/ex67f.F /petsc/src/mat/examples/tests/makefile /petsc/src/mat/impls/aij/mpi/mpiov.c zmatrixf.c /petsc/src/mat/interface/matrix.c
df750dc8	17-Feb-2017	Hong Zhang <hzhang@mcs.anl.gov>	add MatDestroySubMatrices(); bugfix /petsc/.travis.yml /petsc/bin/petscdiff /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/alquimia.py /petsc/config/BuildSystem/config/packages/p4est.py /petsc/config/BuildSystem/config/packages/pflotran.py /petsc/config/BuildSystem/config/packages/pragmatic.py /petsc/config/builder.py /petsc/config/configure.py /petsc/config/example_template.py /petsc/config/gmakegentest.py /petsc/config/petsc_harness.sh /petsc/gmakefile /petsc/include/petsc/finclude/petscdm.h /petsc/include/petsc/finclude/petscis.h /petsc/include/petsc/finclude/petscmat.h /petsc/include/petsc/finclude/petscsys.h /petsc/include/petsc/private/dmimpl.h /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petsc/private/matimpl.h /petsc/include/petscdm.h /petsc/include/petscdmforest.h /petsc/include/petscmat.h /petsc/include/petscpc.h /petsc/include/petscsys.h /petsc/lib/petsc/conf/test 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c3c607cc	20-Jan-2017	Barry Smith <bsmith@mcs.anl.gov>	Fixup more F90 interface definitions for users Time: .15 hours Reported-by: Manuel Valera <mvalera@mail.sdsu.edu> /petsc/.gitignore /petsc/bin/FASTMathInstaller.py /petsc/bin/maint/builddist /petsc/bin/maint/buildtest /petsc/bin/maint/convertExamples.py /petsc/bin/maint/convertExamplesUtils.py /petsc/bin/maint/createpatch /petsc/bin/maint/examplesMkParse.py /petsc/bin/maint/examplesWalker.py /petsc/bin/maint/findvisibleprivatefunctions /petsc/bin/maint/normalizeOutput.py /petsc/bin/petscdiff /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/SuperLU.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/alquimia.py /petsc/config/BuildSystem/config/packages/boost.py /petsc/config/BuildSystem/config/packages/ctetgen.py /petsc/config/BuildSystem/config/packages/f2cblaslapack.py 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390e1bf2	25-Dec-2016	Barry Smith <bsmith@mcs.anl.gov>	Minor cleanup, remove some outdated code, remove unneeded constructs, improve manual pages slightly, add missing test case Time: 2.5 hours /petsc/bin/maint/buildtest /petsc/bin/maint/confignightly/ps4-2 /petsc/bin/maint/confignightly/ps4-3 /petsc/bin/maint/confignightly/ps4-4 /petsc/bin/maint/toclapack.sh /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/Chombo.py /petsc/config/BuildSystem/config/packages/MOAB.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/OpenMPI.py /petsc/config/BuildSystem/config/packages/PTScotch.py /petsc/config/BuildSystem/config/packages/PaStiX.py /petsc/config/BuildSystem/config/packages/SuperLU.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py 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1006886c	29-Nov-2016	Satish Balay <balay@mcs.anl.gov>	MatSetValues: fix fortran interface mangling for MatSetValuesnnnn() /petsc/include/petsc/finclude/petscsysdef.h /petsc/include/petscsys.h /petsc/lib/petsc/conf/bfort-petsc.txt /petsc/src/ksp/ksp/examples/tutorials/ex54f.F /petsc/src/mat/examples/tests/ex120f.F /petsc/src/mat/examples/tests/ex171f.F /petsc/src/mat/f90-mod/petscmatmod.F zmatrixf.c /petsc/src/snes/examples/tests/ex12f.F /petsc/src/snes/examples/tutorials/ex5f.F /petsc/src/sys/makefile /petsc/src/tao/leastsquares/examples/tutorials/chwirut1f.F /petsc/src/tao/leastsquares/examples/tutorials/chwirut2f.h
1b266c99	20-Nov-2016	Barry Smith <bsmith@mcs.anl.gov>	Updated and simplified Fortran interface Reduced from 4 distinct approaches to using PETSc from Fortran to 1 No more .h90 files (Fortran 90 functionality is now always available) Parameters and func Updated and simplified Fortran interface Reduced from 4 distinct approaches to using PETSc from Fortran to 1 No more .h90 files (Fortran 90 functionality is now always available) Parameters and function prototypes are now provide through Fortran modules, not includes; only #define are provided in the petscXXXdef.h files PETSc objects can be declared as either type(tXXX) or XXX. For example type(tVec) or Vec Moved now private Fortran include files out of public include directory since uses don't use them; they are only used to generate the Fortran modules Easier to support and test; we can now easily add more function prototypes Also had to rework generation of manual pages to consistently use MANSEC and SUBMANSEC since these variables also handle how the Fortran modules are generated. Time: 57 hours show more ... /petsc/bin/maint/generatefortranstubs.py /petsc/bin/maint/runhtml.py /petsc/config/BuildSystem/config/packages/Trilinos.py /petsc/config/BuildSystem/config/packages/Zoltan.py /petsc/config/BuildSystem/config/packages/cuda.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/BuildSystem/config/packages/xSDKTrilinos.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/PETSc/Regression.py /petsc/config/PETSc/options/fortranCPP.py /petsc/config/builder.py /petsc/config/builder2.py /petsc/config/configure.py /petsc/config/examples/arch-cuda-double.py /petsc/config/examples/arch-cuda-single.py /petsc/config/examples/arch-linux-pkgs-dbg-ftn-interfaces.py /petsc/config/examples/arch-linux-pkgs-threadcomm.py /petsc/config/examples/arch-linux-xsdk-latest.py /petsc/config/examples/arch-mswin-cxx-cmplx.py /petsc/config/examples/arch-mswin.py /petsc/config/examples/arch-opensolaris-misc.py /petsc/config/examples/arch-osx-xsdk-opt.py 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3b494cfe	21-Nov-2016	Satish Balay <balay@mcs.anl.gov>	ftn: fix vecsetvalues() interface def errors wrt pgf90 [similary matsetvalues()] [/sandbox/petsc/petsc.clone-2/src/snes/examples/tests ex18f90] /sandbox/petsc/petsc.clone-2/arch-linux-pgi/bin/mpif9 ftn: fix vecsetvalues() interface def errors wrt pgf90 [similary matsetvalues()] [/sandbox/petsc/petsc.clone-2/src/snes/examples/tests ex18f90] /sandbox/petsc/petsc.clone-2/arch-linux-pgi/bin/mpif90 -c -Mfree -g -I/sandbox/petsc/petsc.clone-2/include -I/sandbox/petsc/petsc.clone-2/arch-linux-pgi/include -o ex18f90.o ex18f90.F90 PGF90-S-0043-Illegal attempt to redefine symbol vecsetvalues (/sandbox/petsc/petsc.clone-2/include/petsc/finclude/ftn-custom/petscvec.h90: 8) 0 inform, 0 warnings, 1 severes, 0 fatal for extended_module PGF90-S-0043-Illegal attempt to redefine symbol vecsetvalues (/sandbox/petsc/petsc.clone-2/include/petsc/finclude/ftn-custom/petscvec.h90: 8) 0 inform, 0 warnings, 1 severes, 0 fatal for ex18f90 show more ... /petsc/config/BuildSystem/config/packages/pflotran.py /petsc/include/petsc/finclude/ftn-custom/petscmat.h90 /petsc/include/petsc/finclude/ftn-custom/petscvec.h90 zmatrixf.c /petsc/src/vec/vec/interface/ftn-custom/zvectorf.c
4d03fd2b	16-Nov-2016	Barry Smith <bsmith@mcs.anl.gov>	Add multiple Fortran interface definitions for MatSetValuesXXX() and VecSetValuesXXX() Tested against PFlotran. This is needed because Fortran requires seperate interface definitions if the argument Add multiple Fortran interface definitions for MatSetValuesXXX() and VecSetValuesXXX() Tested against PFlotran. This is needed because Fortran requires seperate interface definitions if the argument is a scalar or an array of size 1. Funded-by: IDEAS Project: IDEAS/xSDK Time: 6 hours show more ... /petsc/bin/maint/builddist /petsc/bin/maint/buildtest /petsc/bin/maint/checkBuilds.py /petsc/bin/maint/confignightly/cg2 /petsc/bin/maint/confignightly/cg4 /petsc/bin/maint/confignightly/el6-4 /petsc/bin/maint/confignightly/grind /petsc/bin/maint/confignightly/grind2 /petsc/bin/maint/confignightly/ps4 /petsc/bin/maint/confignightly/thrash2 /petsc/bin/maint/copylognightly /petsc/bin/maint/examplesWalker.py /petsc/bin/maint/fixinclude /petsc/bin/maint/killnightly /petsc/bin/maint/mapnameslatex.py /petsc/bin/maint/runhtml.py /petsc/bin/maint/startnightly /petsc/config/BuildSystem/RDict.py /petsc/config/BuildSystem/config/compile/FC.py /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/MOAB.py 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9a625307	08-Dec-2015	Hong Zhang <hzhang@mcs.anl.gov>	more Revert "replace 'const MatFactorInfo' to 'MatFactorInfo' in MatFactor routines" /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/packages/SuperLU.py /petsc/config/examples/arch-freebsd-pkgs-opt.py /petsc/config/examples/arch-osx-pgi-pkgs-opt.py /petsc/include/petsc/finclude/petscksp.h /petsc/include/petsc/finclude/petscmat.h /petsc/include/petsc/finclude/petscpc.h /petsc/include/petsc/finclude/petscpcdef.h /petsc/include/petsc/private/kspimpl.h /petsc/include/petsc/private/matimpl.h /petsc/include/petscksp.h /petsc/include/petscmat.h /petsc/include/petscpctypes.h /petsc/src/docs/tex/manual/part2.tex /petsc/src/ksp/ksp/examples/tutorials/ex10.c /petsc/src/ksp/ksp/examples/tutorials/makefile /petsc/src/ksp/ksp/examples/tutorials/output/ex10_zeropivot.out /petsc/src/ksp/ksp/examples/tutorials/output/ex10_zeropivot_3.out /petsc/src/ksp/ksp/impls/cheby/cheby.c /petsc/src/ksp/ksp/impls/preonly/preonly.c /petsc/src/ksp/ksp/interface/dlregisksp.c /petsc/src/ksp/ksp/interface/iterativ.c /petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/ksp/pc/impls/asm/asm.c /petsc/src/ksp/pc/impls/bjacobi/bjacobi.c /petsc/src/ksp/pc/impls/factor/cholesky/cholesky.c /petsc/src/ksp/pc/impls/factor/factor.h /petsc/src/ksp/pc/impls/factor/icc/icc.c /petsc/src/ksp/pc/impls/factor/ilu/ilu.c /petsc/src/ksp/pc/impls/factor/lu/lu.c /petsc/src/ksp/pc/impls/ksp/pcksp.c /petsc/src/ksp/pc/interface/precon.c /petsc/src/mat/impls/aij/mpi/mkl_cpardiso/mkl_cpardiso.c /petsc/src/mat/impls/aij/mpi/mumps/mumps.c /petsc/src/mat/impls/aij/mpi/pastix/pastix.c /petsc/src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/aij.h /petsc/src/mat/impls/aij/seq/aijfact.c /petsc/src/mat/impls/aij/seq/bas/basfactor.c /petsc/src/mat/impls/aij/seq/inode.c /petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c /petsc/src/mat/impls/aij/seq/superlu/superlu.c /petsc/src/mat/impls/baij/seq/baij.c /petsc/src/mat/impls/baij/seq/baij.h /petsc/src/mat/impls/baij/seq/baijfact.c /petsc/src/mat/impls/baij/seq/baijfact11.c /petsc/src/mat/impls/baij/seq/baijfact13.c /petsc/src/mat/impls/baij/seq/baijfact2.c /petsc/src/mat/impls/baij/seq/baijfact3.c /petsc/src/mat/impls/baij/seq/baijfact4.c /petsc/src/mat/impls/baij/seq/baijfact5.c /petsc/src/mat/impls/baij/seq/baijfact7.c /petsc/src/mat/impls/baij/seq/baijfact9.c /petsc/src/mat/impls/baij/seq/bstream/bstrmfact.c /petsc/src/mat/impls/dense/seq/dense.c /petsc/src/mat/impls/mffd/mffd.c /petsc/src/mat/impls/sbaij/seq/sbaij.c /petsc/src/mat/impls/sbaij/seq/sbaij.h /petsc/src/mat/impls/sbaij/seq/sbaijfact.c /petsc/src/mat/impls/sbaij/seq/sbaijfact10.c /petsc/src/mat/impls/sbaij/seq/sbaijfact11.c /petsc/src/mat/impls/sbaij/seq/sbaijfact12.c /petsc/src/mat/impls/sbaij/seq/sbaijfact2.c /petsc/src/mat/impls/sbaij/seq/sbaijfact3.c /petsc/src/mat/impls/sbaij/seq/sbaijfact4.c /petsc/src/mat/impls/sbaij/seq/sbaijfact5.c /petsc/src/mat/impls/sbaij/seq/sbaijfact6.c /petsc/src/mat/impls/sbaij/seq/sbaijfact7.c /petsc/src/mat/impls/sbaij/seq/sbaijfact8.c /petsc/src/mat/impls/sbaij/seq/sbaijfact9.c /petsc/src/mat/impls/sbaij/seq/sbstream/sbstrmfact.c zmatrixf.c /petsc/src/mat/interface/matrix.c /petsc/src/mat/utils/gcreate.c /petsc/src/snes/examples/tests/output/ex69_4.out /petsc/src/snes/examples/tests/output/ex69_5.out
d1083749	17-Nov-2015	Satish Balay <balay@mcs.anl.gov>	more const changes /petsc/.gitignore /petsc/.mailmap /petsc/bin/maint/buildtest /petsc/bin/maint/checkBuilds.py /petsc/bin/maint/confignightly/cg3 /petsc/bin/maint/confignightly/el6 /petsc/bin/maint/confignightly/el6-2 /petsc/bin/maint/confignightly/el6-3 /petsc/bin/maint/confignightly/frog /petsc/bin/maint/confignightly/frog2 /petsc/bin/maint/confignightly/frog3 /petsc/bin/maint/confignightly/frog4 /petsc/bin/maint/confignightly/ipro /petsc/bin/maint/confignightly/ipro2 /petsc/bin/maint/confignightly/ipro3 /petsc/bin/maint/confignightly/steamroller2 /petsc/bin/maint/dos/buildntdist /petsc/bin/maint/generateetags.py /petsc/bin/maint/generatefortranstubs.py /petsc/bin/maint/jenkins/jenkins_configure.sh /petsc/bin/maint/jenkins/jenkins_make.sh /petsc/bin/maint/jenkins/jenkins_test.sh /petsc/bin/maint/petsc-val.supp /petsc/bin/maint/rebuildtar /petsc/bin/maint/update-docs.py /petsc/bin/maint/xclude /petsc/bin/petsc_gen_xdmf.py 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422a814e	01-May-2015	Barry Smith <bsmith@mcs.anl.gov>	Infrastructure that allows failures in PCSetUp(), PCApply(), MatMult() etc due to, for example a zero pivot or function evaluation outside its domain, to propagate up and become a KSP_DIVERGED inste Infrastructure that allows failures in PCSetUp(), PCApply(), MatMult() etc due to, for example a zero pivot or function evaluation outside its domain, to propagate up and become a KSP_DIVERGED instead of generating an error that stops the program. In response to Issue 96. This includes failures in MatCreateSNESMF() applications due to domain errors. The mechanism to propagate some errors is by setting Info or Nan into the output vector and using the norm or inner product reductions in SNES or KSP to propagate the error condition to all processes and then handling them immediately after the norm or inner product. This allows, for example, ODE integrators to try again with a smaller time-step if the PCSetUp failed instead of requiring a complete restart of the run with other options. Currently some error conditions, such as function domain error in a line search may not get progated up using the correct SNESConvergedReason See src/snes/examples/tests/ex69.c for the handling of several conditions show more ... /petsc/bin/maint/checkBuilds.py /petsc/bin/maint/generatefortranstubs.py /petsc/bin/petscmpiexec /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/OpenMPI.py /petsc/config/BuildSystem/config/packages/ctetgen.py /petsc/config/BuildSystem/config/packages/cuda.py /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/PETSc/options/arch.py /petsc/config/builder2.py /petsc/include/petsc/finclude/petscmat.h /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petsc/private/kspimpl.h /petsc/include/petsc/private/linesearchimpl.h /petsc/include/petsc/private/matimpl.h /petsc/include/petsc/private/pcimpl.h /petsc/include/petsc/private/petscimpl.h /petsc/include/petsc/private/snesimpl.h 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/petsc/src/snes/impls/ngmres/ngmresfunc.c /petsc/src/snes/impls/ngmres/snesngmres.c /petsc/src/snes/impls/qn/qn.c /petsc/src/snes/impls/richardson/snesrichardson.c /petsc/src/snes/impls/tr/tr.c /petsc/src/snes/impls/vi/rs/virs.c /petsc/src/snes/impls/vi/ss/viss.c /petsc/src/snes/impls/vi/vi.c /petsc/src/snes/interface/snes.c /petsc/src/snes/interface/snesj.c /petsc/src/snes/interface/snesob.c /petsc/src/snes/linesearch/impls/basic/linesearchbasic.c /petsc/src/snes/linesearch/impls/bt/linesearchbt.c /petsc/src/snes/linesearch/impls/cp/linesearchcp.c /petsc/src/snes/linesearch/impls/l2/linesearchl2.c /petsc/src/snes/linesearch/impls/nleqerr/linesearchnleqerr.c /petsc/src/snes/linesearch/impls/shell/linesearchshell.c /petsc/src/snes/linesearch/interface/linesearch.c /petsc/src/snes/utils/dmdasnes.c /petsc/src/snes/utils/dmplexsnes.c /petsc/src/snes/utils/dmsnes.c /petsc/src/snes/utils/f90-custom/zdmplexsnesf90.c /petsc/src/sys/classes/bag/bag.c /petsc/src/sys/classes/draw/impls/win32/win32draw.c /petsc/src/sys/classes/draw/interface/dmarker.c /petsc/src/sys/classes/draw/interface/drawreg.c /petsc/src/sys/classes/draw/utils/axisc.c /petsc/src/sys/classes/draw/utils/bars.c /petsc/src/sys/classes/draw/utils/dscatter.c /petsc/src/sys/classes/draw/utils/hists.c /petsc/src/sys/classes/draw/utils/lgc.c /petsc/src/sys/classes/matlabengine/matlab.c /petsc/src/sys/classes/random/interface/randomc.c /petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c /petsc/src/sys/classes/viewer/interface/viewreg.c /petsc/src/sys/error/fp.c /petsc/src/sys/fileio/sysio.c /petsc/src/sys/ftn-custom/zutils.c /petsc/src/sys/logging/plog.c /petsc/src/sys/objects/aoptions.c /petsc/src/sys/objects/inherit.c /petsc/src/sys/objects/options.c /petsc/src/sys/objects/subcomm.c /petsc/src/sys/utils/ftn-custom/zpbarrierf.c /petsc/src/sys/utils/str.c /petsc/src/sys/webclient/box.c /petsc/src/sys/webclient/google.c /petsc/src/tao/bound/impls/blmvm/blmvm.c 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/petsc/src/tao/unconstrained/impls/nls/nls.c /petsc/src/tao/unconstrained/impls/ntl/ntl.c /petsc/src/tao/unconstrained/impls/ntr/ntr.c /petsc/src/tao/unconstrained/impls/owlqn/owlqn.c /petsc/src/ts/adapt/interface/tsadapt.c /petsc/src/ts/characteristic/interface/characteristic.c /petsc/src/ts/event/tsevent.c /petsc/src/ts/examples/tutorials/ex10.c /petsc/src/ts/examples/tutorials/ex14.c /petsc/src/ts/examples/tutorials/ex16adj.c /petsc/src/ts/examples/tutorials/ex16opt_ic.c /petsc/src/ts/examples/tutorials/ex16opt_p.c /petsc/src/ts/examples/tutorials/ex20adj.c /petsc/src/ts/examples/tutorials/ex20opt_ic.c /petsc/src/ts/examples/tutorials/ex20opt_p.c /petsc/src/ts/examples/tutorials/ex22.c /petsc/src/ts/examples/tutorials/ex9.c /petsc/src/ts/examples/tutorials/extchem.c /petsc/src/ts/examples/tutorials/extchemfield.c /petsc/src/ts/examples/tutorials/makefile /petsc/src/ts/examples/tutorials/power_grid/ex3adj.c /petsc/src/ts/examples/tutorials/power_grid/ex3adj_events.c /petsc/src/ts/examples/tutorials/power_grid/ex3opt.c /petsc/src/ts/examples/tutorials/power_grid/ex3opt_fd.c /petsc/src/ts/examples/tutorials/power_grid/ex5.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9bus.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busadj.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt_fd.c /petsc/src/ts/impls/eimex/eimex.c /petsc/src/ts/impls/explicit/rk/rk.c /petsc/src/ts/impls/implicit/gl/gladapt.c /petsc/src/ts/impls/implicit/theta/theta.c /petsc/src/ts/impls/rosw/rosw.c /petsc/src/ts/interface/ts.c /petsc/src/ts/interface/tscreate.c /petsc/src/ts/trajectory/interface/traj.c /petsc/src/ts/utils/dmts.c /petsc/src/vec/is/ao/impls/mapping/aomapping.c /petsc/src/vec/is/ao/impls/mapping/ftn-custom/zaomappingf.c /petsc/src/vec/is/ao/interface/ao.c /petsc/src/vec/is/is/interface/isreg.c /petsc/src/vec/is/sf/interface/sf.c /petsc/src/vec/is/utils/isltog.c /petsc/src/vec/is/utils/vsectionis.c /petsc/src/vec/pf/interface/pf.c /petsc/src/vec/vec/examples/tests/ex47.c /petsc/src/vec/vec/examples/tests/makefile /petsc/src/vec/vec/impls/mpi/pdvec.c /petsc/src/vec/vec/interface/veccreate.c /petsc/src/vec/vec/interface/vector.c /petsc/src/vec/vec/utils/vecio.c /petsc/src/vec/vec/utils/vscat.c
af0996ce	11-Apr-2015	Barry Smith <bsmith@mcs.anl.gov>	updated PETSc directory layout to match standard packaging strategies include/petsc finclude,private,mpiuni lib/petsc conf bin/petsc* /petsc/ConfigureFixes.tex /petsc/bin/PetscBinaryIO.py /petsc/bin/PetscBinaryIO_tests.py /petsc/bin/configVars.py /petsc/bin/maint/builddist /petsc/bin/maint/buildtest /petsc/bin/maint/checkBuilds.py /petsc/bin/maint/generateetags.py /petsc/bin/maint/generatefortranstubs.py /petsc/bin/maint/generators/matlab.py /petsc/bin/maint/submitPatch.py /petsc/bin/maint/toclapack.sh /petsc/bin/maint/xclude /petsc/bin/mpiexec.sshsync /petsc/bin/petsc_conf.py /petsc/bin/petsc_gen_xdmf.py /petsc/bin/petsclogformat.py /petsc/bin/petscmpiexec /petsc/bin/petscnagupgrade.py /petsc/bin/portabilitycheck.py /petsc/config/BuildSystem/config/base.py /petsc/config/BuildSystem/config/compilerFlags.py /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/functions.py /petsc/config/BuildSystem/config/headers.py /petsc/config/BuildSystem/config/libraries.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/Chaco.py /petsc/config/BuildSystem/config/packages/Chombo.py /petsc/config/BuildSystem/config/packages/MOAB.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/Matlab.py /petsc/config/BuildSystem/config/packages/OpenMPI.py /petsc/config/BuildSystem/config/packages/PARTY.py /petsc/config/BuildSystem/config/packages/PTScotch.py /petsc/config/BuildSystem/config/packages/PaStiX.py /petsc/config/BuildSystem/config/packages/SuiteSparse.py /petsc/config/BuildSystem/config/packages/SuperLU.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/SuperLU_MT.py /petsc/config/BuildSystem/config/packages/Triangle.py /petsc/config/BuildSystem/config/packages/Trilinos.py /petsc/config/BuildSystem/config/packages/Zoltan.py /petsc/config/BuildSystem/config/packages/afterimage.py /petsc/config/BuildSystem/config/packages/boost.py /petsc/config/BuildSystem/config/packages/c2html.py /petsc/config/BuildSystem/config/packages/cmake.py /petsc/config/BuildSystem/config/packages/ctetgen.py /petsc/config/BuildSystem/config/packages/cuda.py /petsc/config/BuildSystem/config/packages/cusp.py /petsc/config/BuildSystem/config/packages/elemental.py /petsc/config/BuildSystem/config/packages/exodusii.py /petsc/config/BuildSystem/config/packages/f2cblaslapack.py /petsc/config/BuildSystem/config/packages/fblaslapack.py /petsc/config/BuildSystem/config/packages/fiat.py /petsc/config/BuildSystem/config/packages/glut.py /petsc/config/BuildSystem/config/packages/hwloc.py /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/BuildSystem/config/packages/lgrind.py /petsc/config/BuildSystem/config/packages/make.py /petsc/config/BuildSystem/config/packages/metis.py /petsc/config/BuildSystem/config/packages/mkl_cpardiso.py /petsc/config/BuildSystem/config/packages/mkl_pardiso.py /petsc/config/BuildSystem/config/packages/ml.py /petsc/config/BuildSystem/config/packages/mpe.py /petsc/config/BuildSystem/config/packages/mpi4py.py /petsc/config/BuildSystem/config/packages/netcdf.py /petsc/config/BuildSystem/config/packages/opencl.py /petsc/config/BuildSystem/config/packages/opengl.py /petsc/config/BuildSystem/config/packages/opengles.py /petsc/config/BuildSystem/config/packages/openmp.py /petsc/config/BuildSystem/config/packages/openmpclasses.py /petsc/config/BuildSystem/config/packages/pARMS.py /petsc/config/BuildSystem/config/packages/parmetis.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/BuildSystem/config/packages/pthread.py /petsc/config/BuildSystem/config/packages/pthreadclasses.py /petsc/config/BuildSystem/config/packages/scalapack.py /petsc/config/BuildSystem/config/packages/scientificpython.py /petsc/config/BuildSystem/config/packages/sowing.py /petsc/config/BuildSystem/config/packages/spai.py /petsc/config/BuildSystem/config/packages/sprng.py /petsc/config/BuildSystem/config/packages/ssl.py /petsc/config/BuildSystem/config/packages/sundials.py /petsc/config/BuildSystem/config/packages/tchem.py /petsc/config/BuildSystem/config/packages/tetgen.py /petsc/config/BuildSystem/config/packages/valgrind.py /petsc/config/BuildSystem/config/packages/viennacl.py /petsc/config/BuildSystem/config/programs.py /petsc/config/BuildSystem/config/python.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/BuildSystem/config/sourceControl.py /petsc/config/BuildSystem/config/types.py /petsc/config/BuildSystem/config/utilities/cacheDetails.py /petsc/config/BuildSystem/config/utilities/debuggers.py /petsc/config/BuildSystem/config/utilities/getResidentSetSize.py /petsc/config/BuildSystem/logger.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/options/indexTypes.py /petsc/config/PETSc/options/installDir.py /petsc/config/PETSc/options/libraryOptions.py /petsc/config/PETSc/packages/tchem.py /petsc/config/PETSc/petsc.py /petsc/config/builder.py /petsc/config/builder2.py /petsc/config/cmakeboot.py /petsc/config/cmakegen.py /petsc/config/configure.py /petsc/config/examples/arch-freebsd-pkgs-opt.py /petsc/config/examples/arch-linux-pkgs-opt.py /petsc/config/gmakegen.py /petsc/config/install.py /petsc/gmakefile /petsc/include/makefile /petsc/include/petsc/finclude/ftn-custom/makefile /petsc/include/petsc/finclude/ftn-custom/petscdm.h90 /petsc/include/petsc/finclude/ftn-custom/petscdmcomposite.h90 /petsc/include/petsc/finclude/ftn-custom/petscdmda.h90 /petsc/include/petsc/finclude/ftn-custom/petscdmdef.h90 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87bcf4e0	20-Feb-2015	Barry Smith <bsmith@mcs.anl.gov>	added manual Fortran stubs for MatGetRowMin[Abs] to allow PETSC_NULL_INTEGER argument for idx /petsc/src/mat/examples/tests/ex58f.F zmatrixf.c /petsc/src/mat/interface/matrix.c
5928be6b	20-Feb-2015	Barry Smith <bsmith@mcs.anl.gov>	Allow PETSC_NULL_INTEGER arguments for MatGetRow and MatGetRowMax calls /petsc/.gitignore /petsc/.hgignore /petsc/.mailmap /petsc/CONTRIBUTING /petsc/LICENSE /petsc/bin/FASTMathInstaller.py /petsc/bin/maint/builddist /petsc/bin/maint/buildtest /petsc/bin/maint/confignightly/cg /petsc/bin/maint/confignightly/cg2 /petsc/bin/maint/confignightly/churn2 /petsc/bin/maint/confignightly/crank2 /petsc/bin/maint/confignightly/crank3 /petsc/bin/maint/confignightly/imav /petsc/bin/maint/confignightly/petsc-mini /petsc/bin/maint/confignightly/petsc-mini2 /petsc/bin/maint/confignightly/petsc-mini3 /petsc/bin/maint/confignightly/petsc-mini4 /petsc/bin/maint/findvisibleprivatefunctions /petsc/bin/maint/generateetags.py /petsc/bin/maint/generatefortranstubs.py /petsc/bin/maint/getpdflabels.py /petsc/bin/maint/rebuildtar /petsc/bin/maint/update-docs.py /petsc/bin/petsclogformat.py /petsc/bin/petscmpiexec /petsc/bin/petscnagupgrade.py 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fcc9d04b	07-Oct-2014	Barry Smith <bsmith@mcs.anl.gov>	fix dropping of vecs in Fortran interface to MatCreateVecs fix complex example that would not compile with c++ /petsc/src/ksp/ksp/examples/tutorials/ex60.c zmatrixf.c
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2a7a6963	19-Sep-2014	Barry Smith <bsmith@mcs.anl.gov>	MatGetVecs() and KSPGetVecs() replaced with MatCreateVecs() and KSPCreateVecs() since they are creators not getters /petsc/.gitignore /petsc/.hgignore /petsc/CONTRIBUTING /petsc/LICENSE /petsc/bin/FASTMathInstaller.py /petsc/bin/maint/builddist /petsc/bin/maint/confignightly/cg /petsc/bin/maint/confignightly/cg2 /petsc/bin/maint/confignightly/churn2 /petsc/bin/maint/confignightly/crank2 /petsc/bin/maint/confignightly/imav /petsc/bin/maint/confignightly/petsc-mini /petsc/bin/maint/confignightly/petsc-mini2 /petsc/bin/maint/confignightly/petsc-mini3 /petsc/bin/maint/confignightly/petsc-mini4 /petsc/bin/maint/findvisibleprivatefunctions /petsc/bin/maint/generateetags.py /petsc/bin/maint/generatefortranstubs.py /petsc/bin/maint/getpdflabels.py /petsc/bin/maint/rebuildtar /petsc/bin/maint/update-docs.py /petsc/bin/petsclogformat.py /petsc/bin/petscmpiexec /petsc/bin/petscnagupgrade.py /petsc/bin/pythonscripts/petsc_gen_xdmf.py 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