interface - OpenGrok history log for /petsc/src/mat/interface

Revision	Date	Author	Comments (<<< Hide modified files) (Show modified files >>>)
64b5b27b	16-Apr-2016	Toby Isaac <tisaac@uchicago.edu>	Merge branch 'tisaac/plex-fix-single-prec' * tisaac/plex-fix-single-prec: Plex tests ex3: use PETSC_SMALL Plex: handle switches between double/PetscReal in mesh generation MatNullSpaceTest(): Merge branch 'tisaac/plex-fix-single-prec' * tisaac/plex-fix-single-prec: Plex tests ex3: use PETSC_SMALL Plex: handle switches between double/PetscReal in mesh generation MatNullSpaceTest(): make test depend on precision show more ... /petsc/src/dm/impls/plex/examples/tests/ex3.c /petsc/src/dm/impls/plex/plexgenerate.c matnull.c
147f402e	16-Apr-2016	Barry Smith <bsmith@mcs.anl.gov>	Merge branch 'hzhang/matpackage-type' /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/Trilinos.py /petsc/config/BuildSystem/config/packages/cmake.py /petsc/config/BuildSystem/config/packages/exodusii.py /petsc/config/BuildSystem/config/packages/unittestcpp.py /petsc/config/BuildSystem/config/packages/xSDKTrilinos.py /petsc/src/ksp/ksp/examples/tests/ex48.c /petsc/src/ksp/ksp/examples/tests/makefile /petsc/src/ksp/ksp/examples/tests/output/ex48_1.out /petsc/src/ksp/ksp/examples/tutorials/output/ex25_1.out /petsc/src/ksp/ksp/examples/tutorials/output/ex25_2.out /petsc/src/ksp/ksp/examples/tutorials/output/ex34_1.out /petsc/src/ksp/ksp/examples/tutorials/output/ex43_3.out /petsc/src/ksp/ksp/examples/tutorials/output/ex43_4.out /petsc/src/ksp/ksp/examples/tutorials/output/ex50_3.out /petsc/src/ksp/ksp/impls/minres/minres.c /petsc/src/ksp/pc/impls/bddc/bddcprivate.c /petsc/src/ksp/pc/impls/factor/cholesky/cholesky.c /petsc/src/ksp/pc/impls/factor/factimpl.c /petsc/src/ksp/pc/impls/factor/icc/icc.c /petsc/src/ksp/pc/impls/factor/ilu/ilu.c /petsc/src/ksp/pc/impls/factor/lu/lu.c /petsc/src/ksp/pc/impls/mg/mg.c /petsc/src/ksp/pc/impls/ml/ml.c /petsc/src/mat/impls/aij/mpi/clique/clique.cxx /petsc/src/mat/impls/aij/mpi/mkl_cpardiso/mkl_cpardiso.c /petsc/src/mat/impls/aij/mpi/mumps/mumps.c /petsc/src/mat/impls/aij/mpi/pastix/pastix.c /petsc/src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/aijfact.c /petsc/src/mat/impls/aij/seq/bas/basfactor.c /petsc/src/mat/impls/aij/seq/cholmod/aijcholmod.c /petsc/src/mat/impls/aij/seq/essl/essl.c /petsc/src/mat/impls/aij/seq/klu/klu.c /petsc/src/mat/impls/aij/seq/lusol/lusol.c /petsc/src/mat/impls/aij/seq/matlab/aijmatlab.c /petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c /petsc/src/mat/impls/aij/seq/superlu/superlu.c /petsc/src/mat/impls/aij/seq/umfpack/umfpack.c /petsc/src/mat/impls/baij/seq/baij.c /petsc/src/mat/impls/baij/seq/baijfact.c /petsc/src/mat/impls/baij/seq/bstream/bstrmfact.c /petsc/src/mat/impls/dense/seq/dense.c /petsc/src/mat/impls/elemental/matelem.cxx /petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c /petsc/src/mat/impls/sbaij/seq/sbaij.c /petsc/src/mat/impls/sbaij/seq/sbstream/sbstrmfact.c matrix.c /petsc/src/snes/examples/tutorials/output/ex18_1.out /petsc/src/snes/examples/tutorials/output/ex20_1.out /petsc/src/snes/examples/tutorials/output/ex40f90.out /petsc/src/snes/examples/tutorials/output/ex46_1.out /petsc/src/snes/examples/tutorials/output/ex48_4.out /petsc/src/snes/examples/tutorials/output/ex5_1.out /petsc/src/snes/examples/tutorials/output/ex5_2.out /petsc/src/snes/examples/tutorials/output/ex5_3.out /petsc/src/snes/examples/tutorials/output/ex5_4.out
0c66656f	14-Apr-2016	Hong Zhang <hzhang@mcs.anl.gov>	enable input fill=PETSC_DEFAULT for MatPtAP(), MatRARt() Reported-by: Sebastien Gilles <sebastien.gilles@inria.fr> /petsc/bin/maint/buildtest /petsc/bin/maint/checkBuilds.py /petsc/bin/maint/copylognightly /petsc/bin/maint/runhtml.py /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/Trilinos.py /petsc/config/BuildSystem/config/packages/netcdf.py /petsc/config/BuildSystem/config/packages/xSDKTrilinos.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/builder.py /petsc/config/examples/arch-linux-xsdk-dbg.py /petsc/include/petsc/finclude/petscmat.h /petsc/include/petsc/private/petscfeimpl.h /petsc/include/petscversion.h /petsc/share/petsc/datafiles/meshes/cube_5tets.cas /petsc/share/petsc/datafiles/meshes/cube_5tets_ascii.cas /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/impls/plex/examples/tests/ex1f90.F /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/plex/plexfem.c /petsc/src/dm/impls/plex/plexfluent.c /petsc/src/dm/impls/plex/plexgeometry.c /petsc/src/dm/impls/plex/plexpartition.c /petsc/src/dm/impls/plex/plexsubmesh.c /petsc/src/dm/impls/plex/plextree.c /petsc/src/dm/interface/dm.c /petsc/src/dm/interface/dmi.c /petsc/src/docs/website/download/index.html /petsc/src/ksp/ksp/impls/bcgs/bcgs.c /petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c /petsc/src/mat/examples/tests/ex171f.F /petsc/src/mat/impls/baij/seq/baij2.c /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c /petsc/src/mat/impls/sbaij/seq/sbaij.h /petsc/src/mat/impls/sbaij/seq/sbaij2.c matrix.c /petsc/src/snes/examples/tests/ex18f90.F90 /petsc/src/snes/examples/tutorials/ex73f90t.F90 /petsc/src/snes/examples/tutorials/ex77.c /petsc/src/snes/examples/tutorials/makefile /petsc/src/snes/examples/tutorials/network/pflow/pf.c /petsc/src/snes/examples/tutorials/network/pflow/pf.h /petsc/src/snes/examples/tutorials/output/ex62_31.out /petsc/src/snes/examples/tutorials/output/ex62_32.out /petsc/src/snes/examples/tutorials/output/ex62_33.out /petsc/src/snes/examples/tutorials/output/ex62_34.out /petsc/src/snes/examples/tutorials/output/ex62_35.out /petsc/src/snes/examples/tutorials/output/ex62_36.out /petsc/src/snes/examples/tutorials/output/ex62_quad_q2p1_full.out /petsc/src/snes/examples/tutorials/output/ex62_quad_q2q1_full.out /petsc/src/snes/examples/tutorials/output/ex77_0.out /petsc/src/snes/utils/dmplexsnes.c /petsc/src/sys/logging/examples/tutorials/ex1f.F /petsc/src/sys/objects/options.c /petsc/src/sys/objects/subcomm.c /petsc/src/tao/bound/examples/tutorials/jbearing2.c /petsc/src/tao/bound/examples/tutorials/plate2.c /petsc/src/tao/bound/examples/tutorials/plate2f.F /petsc/src/tao/constrained/examples/tutorials/makefile /petsc/src/tao/constrained/examples/tutorials/maros.c /petsc/src/tao/constrained/examples/tutorials/output/maros_1.out /petsc/src/tao/constrained/examples/tutorials/output/toy_1.out /petsc/src/tao/constrained/examples/tutorials/toy.c /petsc/src/tao/constrained/examples/tutorials/toyf.F /petsc/src/tao/leastsquares/examples/tutorials/chwirut1f.F /petsc/src/tao/leastsquares/examples/tutorials/chwirut2f.F /petsc/src/tao/pde_constrained/examples/tutorials/elliptic.c /petsc/src/tao/pde_constrained/examples/tutorials/hyperbolic.c /petsc/src/tao/pde_constrained/examples/tutorials/output/elliptic_1.out /petsc/src/tao/pde_constrained/examples/tutorials/output/elliptic_2.out /petsc/src/tao/pde_constrained/examples/tutorials/output/hyperbolic_1.out /petsc/src/tao/pde_constrained/examples/tutorials/output/parabolic_1.out /petsc/src/tao/pde_constrained/examples/tutorials/parabolic.c /petsc/src/tao/unconstrained/examples/tutorials/eptorsion1.c /petsc/src/tao/unconstrained/examples/tutorials/eptorsion2.c /petsc/src/tao/unconstrained/examples/tutorials/eptorsion2f.F /petsc/src/tao/unconstrained/examples/tutorials/minsurf1.c /petsc/src/tao/unconstrained/examples/tutorials/minsurf2.c /petsc/src/tao/unconstrained/examples/tutorials/output/eptorsion1_2.out /petsc/src/tao/unconstrained/examples/tutorials/output/eptorsion1_3.out /petsc/src/tao/unconstrained/examples/tutorials/rosenbrock1.c /petsc/src/tao/unconstrained/examples/tutorials/rosenbrock1f.F /petsc/src/ts/examples/tutorials/ex16opt_ic.c /petsc/src/ts/examples/tutorials/ex16opt_p.c /petsc/src/ts/examples/tutorials/ex20opt_ic.c /petsc/src/ts/examples/tutorials/ex20opt_p.c /petsc/src/ts/examples/tutorials/ex22f.F /petsc/src/ts/examples/tutorials/ex22f_mf.F90 /petsc/src/ts/examples/tutorials/network/wash/pipe.h /petsc/src/ts/examples/tutorials/network/wash/pipes1.c /petsc/src/ts/examples/tutorials/network/wash/wash.h /petsc/src/ts/examples/tutorials/power_grid/ex3opt.c /petsc/src/ts/examples/tutorials/power_grid/ex9opt.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt_fd.c /petsc/systems/Apple/iOS/bin/iosbuilder.py
00c67f3b	12-Apr-2016	Hong Zhang <hzhang@mcs.anl.gov>	Fix null output from PCFactorGetMatSolverPackage(); Reported-by: Jose E. Roman <jroman@dsic.upv.es> /petsc/bin/maint/checkBuilds.py /petsc/bin/maint/runhtml.py /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/plex/plexpartition.c /petsc/src/dm/impls/plex/plexsubmesh.c /petsc/src/dm/impls/plex/plextree.c /petsc/src/dm/interface/dm.c /petsc/src/ksp/ksp/examples/tutorials/ex1.c /petsc/src/ksp/pc/impls/factor/cholesky/cholesky.c /petsc/src/ksp/pc/impls/factor/factimpl.c /petsc/src/ksp/pc/impls/factor/icc/icc.c /petsc/src/ksp/pc/impls/factor/ilu/ilu.c /petsc/src/ksp/pc/impls/factor/lu/lu.c /petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c /petsc/src/mat/impls/aij/mpi/clique/clique.cxx /petsc/src/mat/impls/aij/mpi/mkl_cpardiso/mkl_cpardiso.c /petsc/src/mat/impls/aij/mpi/mumps/mumps.c /petsc/src/mat/impls/aij/mpi/pastix/pastix.c /petsc/src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c /petsc/src/mat/impls/aij/seq/aijfact.c /petsc/src/mat/impls/aij/seq/bas/basfactor.c /petsc/src/mat/impls/aij/seq/cholmod/aijcholmod.c /petsc/src/mat/impls/aij/seq/essl/essl.c /petsc/src/mat/impls/aij/seq/klu/klu.c /petsc/src/mat/impls/aij/seq/lusol/lusol.c /petsc/src/mat/impls/aij/seq/matlab/aijmatlab.c /petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c /petsc/src/mat/impls/aij/seq/superlu/superlu.c /petsc/src/mat/impls/aij/seq/umfpack/umfpack.c /petsc/src/mat/impls/baij/seq/baij2.c /petsc/src/mat/impls/baij/seq/baijfact.c /petsc/src/mat/impls/baij/seq/bstream/bstrmfact.c /petsc/src/mat/impls/dense/seq/dense.c /petsc/src/mat/impls/elemental/matelem.cxx /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c /petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c /petsc/src/mat/impls/sbaij/seq/sbaij.c /petsc/src/mat/impls/sbaij/seq/sbaij.h /petsc/src/mat/impls/sbaij/seq/sbaij2.c /petsc/src/mat/impls/sbaij/seq/sbstream/sbstrmfact.c matrix.c /petsc/src/snes/examples/tutorials/network/pflow/pf.c /petsc/src/snes/examples/tutorials/network/pflow/pf.h /petsc/src/snes/utils/dmplexsnes.c /petsc/src/sys/objects/options.c /petsc/src/tao/bound/examples/tutorials/jbearing2.c /petsc/src/tao/bound/examples/tutorials/plate2.c /petsc/src/tao/constrained/examples/tutorials/makefile /petsc/src/tao/constrained/examples/tutorials/maros.c /petsc/src/tao/constrained/examples/tutorials/output/maros_1.out /petsc/src/tao/constrained/examples/tutorials/output/toy_1.out /petsc/src/tao/constrained/examples/tutorials/toy.c /petsc/src/tao/constrained/examples/tutorials/toyf.F /petsc/src/tao/leastsquares/examples/tutorials/chwirut1f.F /petsc/src/tao/pde_constrained/examples/tutorials/elliptic.c /petsc/src/tao/pde_constrained/examples/tutorials/hyperbolic.c /petsc/src/tao/pde_constrained/examples/tutorials/output/elliptic_1.out /petsc/src/tao/pde_constrained/examples/tutorials/output/elliptic_2.out /petsc/src/tao/pde_constrained/examples/tutorials/output/hyperbolic_1.out /petsc/src/tao/pde_constrained/examples/tutorials/output/parabolic_1.out /petsc/src/tao/pde_constrained/examples/tutorials/parabolic.c /petsc/src/tao/unconstrained/examples/tutorials/eptorsion1.c /petsc/src/tao/unconstrained/examples/tutorials/eptorsion2.c /petsc/src/tao/unconstrained/examples/tutorials/eptorsion2f.F /petsc/src/tao/unconstrained/examples/tutorials/minsurf1.c /petsc/src/tao/unconstrained/examples/tutorials/minsurf2.c /petsc/src/tao/unconstrained/examples/tutorials/output/eptorsion1_2.out /petsc/src/tao/unconstrained/examples/tutorials/output/eptorsion1_3.out /petsc/src/tao/unconstrained/examples/tutorials/rosenbrock1.c /petsc/src/tao/unconstrained/examples/tutorials/rosenbrock1f.F /petsc/src/ts/examples/tutorials/ex16opt_ic.c /petsc/src/ts/examples/tutorials/ex16opt_p.c /petsc/src/ts/examples/tutorials/ex20opt_ic.c /petsc/src/ts/examples/tutorials/ex20opt_p.c /petsc/src/ts/examples/tutorials/network/wash/pipe.h /petsc/src/ts/examples/tutorials/network/wash/pipes1.c /petsc/src/ts/examples/tutorials/network/wash/wash.h /petsc/src/ts/examples/tutorials/power_grid/ex3opt.c /petsc/src/ts/examples/tutorials/power_grid/ex9opt.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt_fd.c
337b25d2	11-Apr-2016	Barry Smith <bsmith@mcs.anl.gov>	Remove MatMatMatMultSymbolic() and MatMatMatMultNumeric() from petscmat.h and the manual pages because these routines do not exist. Reported-by: Sebastien Gilles <sebastien.gilles@inria.fr> /petsc/include/petsc/private/tsimpl.h /petsc/include/petscmat.h /petsc/include/petscts.h /petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c /petsc/src/ksp/ksp/impls/gmres/gmres.c /petsc/src/ksp/pc/impls/bddc/bddc.c /petsc/src/ksp/pc/impls/bddc/bddcscalingbasic.c /petsc/src/ksp/pc/impls/eisens/eisen.c /petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c /petsc/src/ksp/pc/impls/ksp/pcksp.c /petsc/src/ksp/pc/impls/mg/mg.c /petsc/src/ksp/pc/impls/ml/ml.c /petsc/src/ksp/pc/impls/redundant/redundant.c /petsc/src/ksp/pc/impls/telescope/telescope.c /petsc/src/ksp/pc/impls/telescope/telescope_dmda.c /petsc/src/mat/impls/elemental/matelem.cxx /petsc/src/mat/impls/fft/fftw/fftw.c matrix.c /petsc/src/mat/partition/impls/chaco/chaco.c /petsc/src/mat/partition/impls/scotch/scotch.c /petsc/src/sys/classes/viewer/impls/ascii/filev.c /petsc/src/sys/classes/viewer/impls/binary/binv.c /petsc/src/sys/objects/options.c /petsc/src/sys/utils/str.c /petsc/src/tao/leastsquares/impls/pounders/gqt.c /petsc/src/tao/leastsquares/impls/pounders/pounders.h /petsc/src/ts/adapt/interface/tsadapt.c /petsc/src/ts/characteristic/interface/characteristic.c /petsc/src/ts/event/tsevent.c /petsc/src/ts/examples/tutorials/ex40.c /petsc/src/ts/examples/tutorials/ex41.c /petsc/src/ts/examples/tutorials/output/ex40.out /petsc/src/ts/examples/tutorials/output/ex41.out /petsc/src/ts/impls/explicit/euler/euler.c /petsc/src/ts/impls/explicit/rk/rk.c /petsc/src/ts/impls/explicit/ssp/ssp.c /petsc/src/ts/impls/implicit/gl/gl.c /petsc/src/ts/impls/implicit/theta/theta.c /petsc/src/ts/impls/mimex/mimex.c /petsc/src/ts/impls/pseudo/posindep.c /petsc/src/ts/impls/rosw/rosw.c /petsc/src/ts/interface/dlregists.c /petsc/src/ts/trajectory/impls/basic/trajbasic.c /petsc/src/ts/trajectory/impls/memory/trajmemory.c /petsc/src/ts/trajectory/impls/singlefile/singlefile.c /petsc/src/ts/trajectory/impls/visualization/trajvisualization.c /petsc/src/ts/trajectory/interface/traj.c /petsc/src/vec/is/ao/examples/tests/ex3d/ex3.cxx /petsc/src/vec/is/sf/impls/window/sfwindow.c
61ba4676	10-Apr-2016	Barry Smith <bsmith@mcs.anl.gov>	a couple of fixes suggested by clang analyzer add missing error checking minor formatting fixes /petsc/bin/maint/buildtest /petsc/bin/maint/checkBuilds.py /petsc/bin/maint/confignightly/crush /petsc/bin/maint/runhtml.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/MOAB.py /petsc/config/BuildSystem/config/packages/SuperLU.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/Trilinos.py /petsc/config/BuildSystem/config/packages/cmake.py /petsc/config/BuildSystem/config/packages/exodusii.py /petsc/config/BuildSystem/config/packages/netcdf.py /petsc/config/BuildSystem/config/packages/xSDKTrilinos.py /petsc/config/PETSc/Configure.py /petsc/config/examples/arch-linux-analyzer.py /petsc/config/examples/arch-moab.py /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petscdmlabel.h /petsc/include/petscts.h /petsc/src/dm/impls/da/dalocal.c /petsc/src/dm/impls/da/grvtk.c /petsc/src/dm/impls/forest/forest.c /petsc/src/dm/impls/network/networkmonitor.c /petsc/src/dm/impls/plex/examples/tests/output/ex11_1.out /petsc/src/dm/impls/plex/examples/tests/output/ex1_17.out /petsc/src/dm/impls/plex/examples/tests/output/ex1_18.out /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/plex/plexcoarsen.c /petsc/src/dm/impls/plex/plexdistribute.c /petsc/src/dm/impls/plex/plexpartition.c /petsc/src/dm/impls/plex/plexsubmesh.c /petsc/src/dm/impls/plex/plextree.c /petsc/src/dm/label/dmlabel.c /petsc/src/ksp/ksp/examples/tests/ex47.c /petsc/src/ksp/ksp/impls/bcgs/fbcgsr/fbcgsr.c /petsc/src/ksp/ksp/impls/cr/cr.c /petsc/src/ksp/ksp/impls/fcg/pipefcg/pipefcg.c /petsc/src/ksp/ksp/impls/gcr/pipegcr/pipegcr.c /petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c /petsc/src/ksp/ksp/impls/gmres/gmreig.c /petsc/src/ksp/ksp/impls/gmres/pipefgmres/pipefgmres.c /petsc/src/ksp/ksp/impls/lcd/lcd.c /petsc/src/ksp/ksp/interface/iterativ.c /petsc/src/ksp/pc/impls/bddc/bddc.c /petsc/src/ksp/pc/impls/bddc/bddcfetidp.c /petsc/src/ksp/pc/impls/bddc/bddcgraph.c /petsc/src/ksp/pc/impls/bddc/bddcprivate.c /petsc/src/ksp/pc/impls/gamg/agg.c /petsc/src/ksp/pc/impls/gamg/classical.c /petsc/src/ksp/pc/impls/mg/mg.c /petsc/src/ksp/pc/impls/telescope/telescope.c /petsc/src/ksp/pc/impls/telescope/telescope_dmda.c /petsc/src/ksp/pc/impls/tfs/xxt.c /petsc/src/ksp/pc/impls/tfs/xyt.c /petsc/src/mat/coarsen/impls/hem/hem.c /petsc/src/mat/color/impls/greedy/greedy.c /petsc/src/mat/color/impls/jp/jp.c /petsc/src/mat/impls/adj/mpi/mpiadj.c /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/mpi/mpiov.c /petsc/src/mat/impls/aij/mpi/mpiptap.c /petsc/src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/bas/spbas_cholesky.h /petsc/src/mat/impls/aij/seq/matptap.c /petsc/src/mat/impls/baij/mpi/mpibaij.c /petsc/src/mat/impls/baij/seq/baijfact.c 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a872bbdc	07-Apr-2016	Toby Isaac <tisaac@uchicago.edu>	MatNullSpaceTest(): make test depend on precision /petsc/bin/maint/buildtest /petsc/bin/maint/confignightly/crush /petsc/bin/maint/runhtml.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/MOAB.py /petsc/config/BuildSystem/config/packages/Trilinos.py /petsc/config/BuildSystem/config/packages/cmake.py /petsc/config/BuildSystem/config/packages/netcdf.py /petsc/config/BuildSystem/config/packages/xSDKTrilinos.py /petsc/config/examples/arch-linux-analyzer.py /petsc/config/examples/arch-moab.py /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petscdmlabel.h /petsc/src/dm/impls/forest/forest.c /petsc/src/dm/impls/plex/examples/tests/output/ex11_1.out /petsc/src/dm/impls/plex/examples/tests/output/ex1_17.out /petsc/src/dm/impls/plex/examples/tests/output/ex1_18.out /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/plex/plexdistribute.c /petsc/src/dm/impls/plex/plexpartition.c /petsc/src/dm/impls/plex/plexsubmesh.c /petsc/src/dm/label/dmlabel.c /petsc/src/ksp/ksp/impls/fcg/pipefcg/pipefcg.c /petsc/src/ksp/ksp/impls/gcr/pipegcr/pipegcr.c /petsc/src/ksp/ksp/impls/gmres/gmreig.c /petsc/src/ksp/ksp/impls/gmres/pipefgmres/pipefgmres.c /petsc/src/ksp/pc/impls/bddc/bddcgraph.c /petsc/src/ksp/pc/impls/telescope/telescope.c /petsc/src/ksp/pc/impls/telescope/telescope_dmda.c /petsc/src/mat/coarsen/impls/hem/hem.c /petsc/src/mat/color/impls/greedy/greedy.c /petsc/src/mat/impls/aij/mpi/mpiaij.c matnull.c /petsc/src/sys/classes/draw/impls/image/drawimage.c /petsc/src/sys/dll/dl.c /petsc/src/sys/fileio/ftn-custom/zsysiof.c /petsc/src/sys/logging/xmllogevent.c /petsc/src/sys/logging/xmlviewer.c /petsc/src/sys/objects/aoptions.c /petsc/src/ts/trajectory/impls/memory/trajmemory.c /petsc/src/ts/trajectory/interface/traj.c /petsc/src/vec/vec/impls/mpi/pdvec.c /petsc/src/vec/vec/impls/nest/vecnest.c
cc442fca	05-Apr-2016	Karl Rupp <rupp@iue.tuwien.ac.at>	Merge branch 'pr421/alex/feature-veccuda' * pr421/alex/feature-veccuda The rationale of this pull request is to have GPU-enabled vectors purely based on CUDA, and with the possibility of placing a u Merge branch 'pr421/alex/feature-veccuda' * pr421/alex/feature-veccuda The rationale of this pull request is to have GPU-enabled vectors purely based on CUDA, and with the possibility of placing a user-provided array on the GPU side. 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c20ebc76	22-Mar-2016	Stefano Zampini <stefano.zampini@gmail.com>	Merge branch 'master' into stefano_zampini/feature-pcbddc-saddlepoint /petsc/bin/maint/checkBuilds.py /petsc/bin/maint/confignightly/cg /petsc/bin/maint/confignightly/grind3 /petsc/bin/petsc_gen_xdmf.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/amanzi.py /petsc/config/BuildSystem/config/packages/ascem-io.py /petsc/config/BuildSystem/config/packages/elemental.py /petsc/config/BuildSystem/config/packages/giflib.py /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/BuildSystem/config/packages/libjpeg.py /petsc/config/BuildSystem/config/packages/libpng.py /petsc/config/BuildSystem/config/packages/make.py /petsc/config/BuildSystem/config/packages/p4est.py 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/petsc/src/sys/classes/draw/impls/x/makefile /petsc/src/sys/classes/draw/impls/x/xcolor.c /petsc/src/sys/classes/draw/impls/x/ximage.c /petsc/src/sys/classes/draw/impls/x/ximpl.h /petsc/src/sys/classes/draw/impls/x/xinit.c /petsc/src/sys/classes/draw/impls/x/xops.c /petsc/src/sys/classes/draw/impls/x/xtext.c /petsc/src/sys/classes/draw/impls/x/xtone.c /petsc/src/sys/classes/draw/interface/dclear.c /petsc/src/sys/classes/draw/interface/dellipse.c /petsc/src/sys/classes/draw/interface/dflush.c /petsc/src/sys/classes/draw/interface/dline.c /petsc/src/sys/classes/draw/interface/dmarker.c /petsc/src/sys/classes/draw/interface/dmouse.c /petsc/src/sys/classes/draw/interface/dpoint.c /petsc/src/sys/classes/draw/interface/draw.c /petsc/src/sys/classes/draw/interface/drawreg.c /petsc/src/sys/classes/draw/interface/drawregall.c /petsc/src/sys/classes/draw/interface/drect.c /petsc/src/sys/classes/draw/interface/dsave.c /petsc/src/sys/classes/draw/interface/dtext.c /petsc/src/sys/classes/draw/interface/dtri.c /petsc/src/sys/classes/draw/interface/dviewp.c /petsc/src/sys/classes/draw/interface/ftn-custom/zdrawregf.c /petsc/src/sys/classes/draw/interface/makefile /petsc/src/sys/classes/draw/utils/axis.c /petsc/src/sys/classes/draw/utils/axisc.c /petsc/src/sys/classes/draw/utils/axisimpl.h /petsc/src/sys/classes/draw/utils/bars.c /petsc/src/sys/classes/draw/utils/dscatter.c /petsc/src/sys/classes/draw/utils/ftn-custom/makefile /petsc/src/sys/classes/draw/utils/ftn-custom/zlgcf.c /petsc/src/sys/classes/draw/utils/hists.c /petsc/src/sys/classes/draw/utils/image.c /petsc/src/sys/classes/draw/utils/lg.c /petsc/src/sys/classes/draw/utils/lgc.c /petsc/src/sys/classes/draw/utils/makefile /petsc/src/sys/classes/draw/utils/zoom.c /petsc/src/sys/classes/viewer/impls/binary/binv.c /petsc/src/sys/classes/viewer/impls/draw/drawv.c /petsc/src/sys/classes/viewer/interface/dupl.c /petsc/src/sys/info/verboseinfo.c /petsc/src/sys/memory/mtr.c /petsc/src/sys/mpiuni/mpi.c /petsc/src/sys/objects/pinit.c /petsc/src/sys/objects/subcomm.c /petsc/src/tao/complementarity/impls/asls/asfls.c /petsc/src/tao/complementarity/impls/asls/asils.c /petsc/src/tao/examples/tutorials/ex1.c /petsc/src/tao/examples/tutorials/ex2.c /petsc/src/tao/examples/tutorials/ex3.c /petsc/src/tao/interface/ftn-custom/ztaosolverf.c /petsc/src/tao/interface/taosolver.c /petsc/src/tao/interface/taosolver_fg.c /petsc/src/tao/leastsquares/examples/tests/chwirut1.c /petsc/src/tao/leastsquares/examples/tests/makefile /petsc/src/tao/leastsquares/examples/tests/output/chwirut1_1.out /petsc/src/tao/leastsquares/examples/tests/output/chwirut1_2.out /petsc/src/tao/leastsquares/examples/tests/output/chwirut1_3.out /petsc/src/tao/leastsquares/examples/tutorials/output/chwirut1_1.out /petsc/src/tao/leastsquares/examples/tutorials/output/chwirut1f_1.out /petsc/src/tao/leastsquares/examples/tutorials/output/chwirut2_1.out /petsc/src/tao/leastsquares/examples/tutorials/output/chwirut2f_1.out /petsc/src/tao/leastsquares/impls/pounders/pounders.c /petsc/src/tao/leastsquares/impls/pounders/pounders.h /petsc/src/tao/linesearch/impls/armijo/armijo.c /petsc/src/tao/linesearch/impls/morethuente/morethuente.c /petsc/src/tao/linesearch/impls/owarmijo/owarmijo.c /petsc/src/tao/matrix/adamat.c /petsc/src/tao/matrix/makefile /petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex5adj.c /petsc/src/ts/examples/tutorials/ex11.c /petsc/src/ts/examples/tutorials/ex11_sa.c /petsc/src/ts/examples/tutorials/ex12.c /petsc/src/ts/examples/tutorials/ex14.c /petsc/src/ts/examples/tutorials/ex16adj.c /petsc/src/ts/examples/tutorials/ex16opt_ic.c /petsc/src/ts/examples/tutorials/ex16opt_p.c /petsc/src/ts/examples/tutorials/ex18.c /petsc/src/ts/examples/tutorials/ex20adj.c /petsc/src/ts/examples/tutorials/ex20opt_ic.c /petsc/src/ts/examples/tutorials/ex20opt_p.c /petsc/src/ts/examples/tutorials/ex31.c /petsc/src/ts/examples/tutorials/ex7.c /petsc/src/ts/examples/tutorials/ex8.c /petsc/src/ts/examples/tutorials/makefile /petsc/src/ts/examples/tutorials/network/wash/pipes1.c /petsc/src/ts/examples/tutorials/output/ex11_p4est_advec_2d.out /petsc/src/ts/examples/tutorials/output/ex11_sw_0.out /petsc/src/ts/examples/tutorials/output/ex18_adv_1.out /petsc/src/ts/examples/tutorials/output/ex18_adv_delta_yper_0.out /petsc/src/ts/examples/tutorials/output/ex18_adv_delta_yper_1.out /petsc/src/ts/examples/tutorials/output/ex18_adv_delta_yper_2.out /petsc/src/ts/examples/tutorials/output/ex18_adv_delta_yper_fim_0.out /petsc/src/ts/examples/tutorials/output/ex18_adv_delta_yper_fim_1.out /petsc/src/ts/examples/tutorials/output/ex18_adv_delta_yper_fim_2.out /petsc/src/ts/examples/tutorials/output/ex18_adv_gauss.out /petsc/src/ts/examples/tutorials/output/ex18_p1p1.out /petsc/src/ts/examples/tutorials/output/ex18_p1p1_xper.out /petsc/src/ts/examples/tutorials/output/ex18_p1p1_xper_ref.out /petsc/src/ts/examples/tutorials/output/ex18_p1p1_xyper.out /petsc/src/ts/examples/tutorials/output/ex18_p1p1_xyper_ref.out /petsc/src/ts/examples/tutorials/output/ex18_p2p1.out /petsc/src/ts/examples/tutorials/output/ex18_p2p1_xyper.out /petsc/src/ts/examples/tutorials/output/ex18_p2p1_xyper_ref.out /petsc/src/ts/examples/tutorials/output/ex8_1.out /petsc/src/ts/examples/tutorials/power_grid/ex3adj.c /petsc/src/ts/examples/tutorials/power_grid/ex3opt.c /petsc/src/ts/examples/tutorials/power_grid/ex3opt_fd.c /petsc/src/ts/examples/tutorials/power_grid/makefile /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busadj.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt_fd.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/output/ex9busadj_1.out /petsc/src/ts/impls/arkimex/arkimex.c /petsc/src/ts/impls/explicit/ssp/ssp.c /petsc/src/ts/impls/implicit/alpha/alpha.c /petsc/src/ts/interface/ts.c /petsc/src/ts/interface/tseig.c /petsc/src/ts/trajectory/impls/makefile /petsc/src/ts/trajectory/impls/memory/trajmemory.c /petsc/src/ts/trajectory/impls/visualization/makefile /petsc/src/ts/trajectory/impls/visualization/trajvisualization.c /petsc/src/ts/trajectory/interface/traj.c /petsc/src/ts/utils/dmdats.c /petsc/src/ts/utils/dmlocalts.c /petsc/src/ts/utils/dmplexts.c /petsc/src/vec/is/is/impls/block/block.c /petsc/src/vec/is/is/impls/general/general.c /petsc/src/vec/is/sf/impls/basic/sfbasic.c /petsc/src/vec/pf/impls/constant/const.c /petsc/src/vec/pf/impls/string/cstring.c /petsc/src/vec/vec/impls/mpi/commonmpvec.c /petsc/src/vec/vec/impls/mpi/pbvec.c /petsc/src/vec/vec/impls/mpi/pdvec.c /petsc/src/vec/vec/impls/seq/bvec2.c /petsc/src/vec/vec/impls/seq/dvec2.c /petsc/src/vec/vec/impls/seq/seqcusp/cuspvecimpl.h /petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx /petsc/src/vec/vec/impls/seq/seqviennacl/viennaclvecimpl.h
f55fe9e4	14-Mar-2016	Barry Smith <bsmith@mcs.anl.gov>	Merge branch 'barry/fix-private-functions' /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/types.py /petsc/include/petsc/mpiuni/mpi.h /petsc/include/petsc/private/dmdaimpl.h /petsc/include/petsc/private/kernels/blockinvert.h /petsc/include/petsc/private/matimpl.h /petsc/include/petsc/private/snesimpl.h /petsc/include/petscsys.h /petsc/lib/petsc/conf/rules /petsc/src/dm/impls/da/da1.c /petsc/src/dm/impls/da/da2.c /petsc/src/dm/impls/da/da3.c /petsc/src/dm/impls/da/hypre/mhyp.h /petsc/src/ksp/ksp/impls/bcgs/fbcgsr/fbcgsr.c /petsc/src/ksp/ksp/impls/bicg/bicg.c /petsc/src/ksp/ksp/impls/cg/cgls.c /petsc/src/ksp/pc/impls/bjacobi/bjacobi.c /petsc/src/ksp/pc/impls/gamg/agg.c /petsc/src/mat/color/impls/greedy/greedy.c /petsc/src/mat/color/impls/jp/jp.c /petsc/src/mat/color/impls/minpack/color.c /petsc/src/mat/color/impls/natural/natural.c /petsc/src/mat/color/impls/power/power.c /petsc/src/mat/examples/tutorials/ex4.c /petsc/src/mat/examples/tutorials/ex5.c /petsc/src/mat/impls/aij/mpi/clique/clique.cxx /petsc/src/mat/impls/aij/mpi/crl/mcrl.c /petsc/src/mat/impls/aij/mpi/csrperm/mpicsrperm.c /petsc/src/mat/impls/aij/mpi/mkl_cpardiso/mkl_cpardiso.c /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/mpi/mpimatmatmatmult.c /petsc/src/mat/impls/aij/mpi/mpimatmatmult.c /petsc/src/mat/impls/aij/mpi/mpiptap.c /petsc/src/mat/impls/aij/mpi/mumps/mumps.c /petsc/src/mat/impls/aij/mpi/pastix/pastix.c /petsc/src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/aij.h /petsc/src/mat/impls/aij/seq/aijfact.c /petsc/src/mat/impls/aij/seq/bas/basfactor.c /petsc/src/mat/impls/aij/seq/cholmod/aijcholmod.c /petsc/src/mat/impls/aij/seq/crl/crl.c /petsc/src/mat/impls/aij/seq/csrperm/csrperm.c /petsc/src/mat/impls/aij/seq/klu/klu.c /petsc/src/mat/impls/aij/seq/matmatmatmult.c /petsc/src/mat/impls/aij/seq/matmatmult.c /petsc/src/mat/impls/aij/seq/matptap.c /petsc/src/mat/impls/aij/seq/superlu/superlu.c /petsc/src/mat/impls/aij/seq/umfpack/umfpack.c /petsc/src/mat/impls/baij/mpi/bstream/mpibstream.c /petsc/src/mat/impls/baij/mpi/mpibaij.c /petsc/src/mat/impls/baij/seq/aijbaij.c /petsc/src/mat/impls/baij/seq/baij.c /petsc/src/mat/impls/baij/seq/baijfact.c /petsc/src/mat/impls/baij/seq/bstream/bstream.c /petsc/src/mat/impls/baij/seq/bstream/bstrmfact.c /petsc/src/mat/impls/baij/seq/dgedi.c /petsc/src/mat/impls/baij/seq/dgefa.c /petsc/src/mat/impls/blockmat/seq/blockmat.c /petsc/src/mat/impls/dense/mpi/mpidense.c /petsc/src/mat/impls/dense/seq/dense.c /petsc/src/mat/impls/dense/seq/dense.h /petsc/src/mat/impls/elemental/matelem.cxx /petsc/src/mat/impls/lrc/lrc.c /petsc/src/mat/impls/maij/maij.c /petsc/src/mat/impls/maij/maij.h /petsc/src/mat/impls/mffd/mffd.c /petsc/src/mat/impls/nest/matnest.c /petsc/src/mat/impls/sbaij/mpi/mpiaijsbaij.c /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c /petsc/src/mat/impls/sbaij/mpi/sbstream/mpisbstream.c /petsc/src/mat/impls/sbaij/seq/aijsbaij.c /petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c /petsc/src/mat/impls/sbaij/seq/sbaij.c /petsc/src/mat/impls/sbaij/seq/sbstream/sbstream.c /petsc/src/mat/impls/sbaij/seq/sbstream/sbstrmfact.c /petsc/src/mat/impls/shell/shell.c /petsc/src/mat/impls/shell/shellcnv.c dlregismat.c /petsc/src/mat/order/amd/amd.c /petsc/src/mat/order/sorder.c /petsc/src/mat/order/sp1wd.c /petsc/src/mat/order/spectral.c /petsc/src/mat/order/spnd.c /petsc/src/mat/order/spqmd.c /petsc/src/mat/order/sprcm.c /petsc/src/mat/order/sregis.c /petsc/src/mat/order/wbm.c /petsc/src/mat/utils/convert.c /petsc/src/mat/utils/gcreate.c /petsc/src/snes/examples/tests/ex69.c /petsc/src/snes/impls/nasm/aspin.c /petsc/src/snes/mf/snesmfj.c /petsc/src/snes/utils/dmdasnes.c /petsc/src/sys/classes/viewer/impls/binary/binv.c /petsc/src/sys/classes/viewer/impls/draw/drawv.c /petsc/src/tao/complementarity/impls/asls/asfls.c /petsc/src/tao/complementarity/impls/asls/asils.c /petsc/src/tao/interface/ftn-custom/ztaosolverf.c /petsc/src/tao/matrix/adamat.c /petsc/src/tao/matrix/makefile /petsc/src/ts/impls/arkimex/arkimex.c /petsc/src/ts/impls/explicit/ssp/ssp.c /petsc/src/ts/impls/implicit/alpha/alpha.c /petsc/src/ts/trajectory/impls/memory/trajmemory.c /petsc/src/vec/is/is/impls/block/block.c /petsc/src/vec/is/is/impls/general/general.c /petsc/src/vec/pf/impls/constant/const.c /petsc/src/vec/pf/impls/string/cstring.c /petsc/src/vec/vec/impls/mpi/commonmpvec.c /petsc/src/vec/vec/impls/mpi/pbvec.c /petsc/src/vec/vec/impls/mpi/pdvec.c /petsc/src/vec/vec/impls/seq/bvec2.c /petsc/src/vec/vec/impls/seq/seqcusp/cuspvecimpl.h /petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx /petsc/src/vec/vec/impls/seq/seqviennacl/viennaclvecimpl.h
f07d178c	14-Mar-2016	Barry Smith <bsmith@mcs.anl.gov>	Merge branch 'hzhang/fix-pcredundant' /petsc/bin/maint/checkBuilds.py /petsc/bin/maint/confignightly/cg /petsc/bin/maint/confignightly/grind3 /petsc/bin/maint/xclude /petsc/bin/petsc_gen_xdmf.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/boost.py /petsc/config/BuildSystem/config/packages/elemental.py /petsc/config/BuildSystem/config/packages/giflib.py /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/BuildSystem/config/packages/libjpeg.py /petsc/config/BuildSystem/config/packages/libpng.py /petsc/config/BuildSystem/config/packages/make.py /petsc/config/BuildSystem/config/packages/p4est.py /petsc/config/BuildSystem/config/packages/parmetis.py /petsc/config/BuildSystem/help.py /petsc/config/BuildSystem/retrieval.py /petsc/config/BuildSystem/script.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/options/libraryOptions.py /petsc/config/builder.py /petsc/config/builder2.py /petsc/config/configure.py /petsc/include/petsc/finclude/petscdraw.h /petsc/include/petsc/finclude/petscmatdef.h /petsc/include/petsc/finclude/petscvecdef.h /petsc/include/petsc/mpiuni/mpi.h /petsc/include/petsc/private/dmforestimpl.h /petsc/include/petsc/private/dmimpl.h /petsc/include/petsc/private/dmlabelimpl.h /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petsc/private/drawimpl.h /petsc/include/petsc/private/petscdsimpl.h /petsc/include/petsc/private/petscfeimpl.h /petsc/include/petsc/private/petscfvimpl.h /petsc/include/petsc/private/taoimpl.h /petsc/include/petscdm.h /petsc/include/petscdmda.h /petsc/include/petscdmforest.h /petsc/include/petscdmlabel.h /petsc/include/petscdmplex.h /petsc/include/petscdraw.h /petsc/include/petscds.h /petsc/include/petscfe.h /petsc/include/petscfetypes.h 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c1619fb6	12-Mar-2016	Barry Smith <bsmith@mcs.anl.gov>	fix MatSolverPackageGet() so it will never return a different one than what was requested (because the requested one did not exist). This is done by setting the initial package to null and then order fix MatSolverPackageGet() so it will never return a different one than what was requested (because the requested one did not exist). This is done by setting the initial package to null and then ordering the petsc factorization routines before any other package Time: .5 hours Reported-by: Hong Zhang <hzhang@mcs.anl.gov> show more ... /petsc/src/ksp/pc/impls/factor/cholesky/cholesky.c /petsc/src/ksp/pc/impls/factor/icc/icc.c /petsc/src/ksp/pc/impls/factor/ilu/ilu.c /petsc/src/ksp/pc/impls/factor/lu/lu.c /petsc/src/ksp/pc/impls/redundant/redundant.c dlregismat.c matrix.c
b85f2e9b	09-Mar-2016	Hong Zhang <hzhang@mcs.anl.gov>	MatSolverPackageGet() search for a working package if input package is not found or input package = NULL; PCSetUp_Redundant() set gmres/bjacobi when matsolver package is not found /petsc/include/petsc/private/dmnetworkimpl.h /petsc/include/petscdmnetwork.h /petsc/include/petscsys.h /petsc/src/dm/impls/network/network.c /petsc/src/ksp/ksp/examples/tutorials/ex52.c /petsc/src/ksp/ksp/examples/tutorials/ex62.c /petsc/src/ksp/pc/impls/redundant/redundant.c /petsc/src/mat/impls/aij/mpi/mumps/mumps.c matrix.c /petsc/src/snes/examples/tutorials/network/pflow/pf.c /petsc/src/sys/objects/subcomm.c
f4732d20	06-Mar-2016	Barry Smith <bsmith@mcs.anl.gov>	Merge branch 'master' into barry/fix-private-functions /petsc/bin/maint/checkBuilds.py /petsc/bin/maint/xclude /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/boost.py /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/BuildSystem/config/types.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/options/libraryOptions.py /petsc/include/petsc/private/kernels/blockinvert.h /petsc/include/petsc/private/matimpl.h /petsc/lib/petsc/conf/rules /petsc/src/dm/impls/da/hypre/mhyp.h /petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/ksp/pc/impls/bddc/bddcprivate.c /petsc/src/mat/examples/tutorials/ex4.c /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/mpi/mpimatmatmatmult.c /petsc/src/mat/impls/aij/mpi/mpimatmatmult.c /petsc/src/mat/impls/aij/mpi/mpiptap.c /petsc/src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/cholmod/aijcholmod.c /petsc/src/mat/impls/aij/seq/klu/klu.c /petsc/src/mat/impls/aij/seq/matmatmatmult.c /petsc/src/mat/impls/aij/seq/matmatmult.c /petsc/src/mat/impls/aij/seq/matptap.c /petsc/src/mat/impls/aij/seq/superlu/superlu.c /petsc/src/mat/impls/aij/seq/umfpack/umfpack.c /petsc/src/mat/impls/baij/seq/dgedi.c /petsc/src/mat/impls/baij/seq/dgefa.c /petsc/src/mat/impls/dense/mpi/mpidense.c /petsc/src/mat/impls/dense/seq/dense.c /petsc/src/mat/impls/dense/seq/dense.h /petsc/src/mat/impls/maij/maij.c /petsc/src/mat/impls/maij/maij.h /petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c matrix.c /petsc/src/mat/utils/gcreate.c /petsc/src/snes/examples/tests/ex69.c /petsc/src/snes/examples/tutorials/makefile /petsc/src/snes/interface/snes.c /petsc/src/sys/classes/viewer/interface/viewreg.c /petsc/src/sys/dll/reg.c /petsc/src/sys/examples/tutorials/ex3.c /petsc/src/sys/logging/plog.c /petsc/src/sys/logging/utils/eventlog.c /petsc/src/tao/interface/ftn-custom/ztaosolverf.c /petsc/src/ts/interface/ts.c /petsc/src/vec/vec/impls/seq/seqcusp/cuspvecimpl.h /petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx /petsc/src/vec/vec/impls/seq/seqviennacl/viennaclvecimpl.h /petsc/src/vec/vec/interface/rvector.c
af25d912	06-Mar-2016	Stefano Zampini <stefano.zampini@gmail.com>	Merge branch 'master' into stefano_zampini/feature-pcbddc-saddlepoint Conflicts: src/ksp/pc/impls/bddc/bddc.c src/ksp/pc/impls/bddc/bddcgraph.c src/ksp/pc/impls/bddc/bddcprivate.c src/ksp/pc/imp Merge branch 'master' into stefano_zampini/feature-pcbddc-saddlepoint Conflicts: src/ksp/pc/impls/bddc/bddc.c src/ksp/pc/impls/bddc/bddcgraph.c src/ksp/pc/impls/bddc/bddcprivate.c src/ksp/pc/impls/bddc/bddcscalingbasic.c src/ksp/pc/impls/bddc/bddcschurs.c src/mat/impls/is/matis.c show more ... /petsc/bin/maint/builddist /petsc/bin/maint/buildtest /petsc/bin/maint/checkBuilds.py /petsc/bin/maint/confignightly/cg3 /petsc/bin/maint/confignightly/default /petsc/bin/maint/confignightly/el6 /petsc/bin/maint/confignightly/el6-2 /petsc/bin/maint/confignightly/el6-3 /petsc/bin/maint/confignightly/frog /petsc/bin/maint/confignightly/frog2 /petsc/bin/maint/confignightly/frog3 /petsc/bin/maint/confignightly/frog4 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/petsc/src/vec/vec/impls/seq/seqcusp/vecscattercusp.cu /petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx /petsc/src/vec/vec/interface/dlregisvec.c /petsc/src/vec/vec/interface/rvector.c /petsc/src/vec/vec/interface/vector.c /petsc/src/vec/vec/makefile /petsc/src/vec/vec/utils/comb.c /petsc/src/vec/vec/utils/makefile /petsc/src/vec/vec/utils/projection.c /petsc/src/vec/vec/utils/vecio.c /petsc/src/vec/vec/utils/vecstash.c /petsc/src/vec/vec/utils/vinv.c /petsc/src/vec/vec/utils/vpscat.c /petsc/src/vec/vec/utils/vscat.c /petsc/src/vec/vec/utils/vsection.c /petsc/tutorials/python/ex1.c /petsc/tutorials/python/ex1f.F
cc2e6a90	03-Mar-2016	Barry Smith <bsmith@mcs.anl.gov>	More decreasing visibility of symbols from outside libraries Also fix a few bugs related to having multiple PETSc libraries /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/boost.py /petsc/include/petsc/finclude/petscdraw.h /petsc/include/petsc/private/dmdaimpl.h /petsc/include/petsc/private/snesimpl.h /petsc/include/petscdraw.h /petsc/include/petscvec.h /petsc/src/dm/impls/da/da1.c /petsc/src/dm/impls/da/da2.c /petsc/src/dm/impls/da/da3.c /petsc/src/dm/impls/da/gr2.c /petsc/src/docs/tex/petsc.bib /petsc/src/ksp/ksp/impls/bcgs/fbcgsr/fbcgsr.c /petsc/src/ksp/ksp/impls/bicg/bicg.c /petsc/src/ksp/ksp/impls/cg/cgls.c /petsc/src/ksp/pc/impls/bjacobi/bjacobi.c /petsc/src/ksp/pc/impls/factor/factimpl.c /petsc/src/ksp/pc/impls/gamg/agg.c /petsc/src/mat/color/impls/greedy/greedy.c /petsc/src/mat/color/impls/jp/jp.c /petsc/src/mat/color/impls/minpack/color.c /petsc/src/mat/color/impls/natural/natural.c /petsc/src/mat/color/impls/power/power.c /petsc/src/mat/examples/tests/makefile /petsc/src/mat/examples/tests/output/ex197_1.out /petsc/src/mat/examples/tests/output/ex197_2.out /petsc/src/mat/examples/tutorials/ex5.c /petsc/src/mat/impls/aij/mpi/clique/clique.cxx /petsc/src/mat/impls/aij/mpi/crl/mcrl.c /petsc/src/mat/impls/aij/mpi/csrperm/mpicsrperm.c /petsc/src/mat/impls/aij/mpi/fdmpiaij.c /petsc/src/mat/impls/aij/mpi/mkl_cpardiso/mkl_cpardiso.c /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/mpi/mumps/mumps.c /petsc/src/mat/impls/aij/mpi/pastix/pastix.c /petsc/src/mat/impls/aij/mpi/superlu_dist/superlu_dist.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/aij.h /petsc/src/mat/impls/aij/seq/aijfact.c /petsc/src/mat/impls/aij/seq/bas/basfactor.c /petsc/src/mat/impls/aij/seq/crl/crl.c /petsc/src/mat/impls/aij/seq/csrperm/csrperm.c /petsc/src/mat/impls/baij/mpi/bstream/mpibstream.c /petsc/src/mat/impls/baij/mpi/mpibaij.c /petsc/src/mat/impls/baij/seq/aijbaij.c /petsc/src/mat/impls/baij/seq/baij.c /petsc/src/mat/impls/baij/seq/baijfact.c /petsc/src/mat/impls/baij/seq/bstream/bstream.c /petsc/src/mat/impls/baij/seq/bstream/bstrmfact.c /petsc/src/mat/impls/blockmat/seq/blockmat.c /petsc/src/mat/impls/dense/mpi/mpidense.c /petsc/src/mat/impls/dense/seq/dense.c /petsc/src/mat/impls/dense/seq/dense.h /petsc/src/mat/impls/elemental/matelem.cxx /petsc/src/mat/impls/lrc/lrc.c /petsc/src/mat/impls/maij/maij.c /petsc/src/mat/impls/mffd/mffd.c /petsc/src/mat/impls/nest/matnest.c /petsc/src/mat/impls/sbaij/mpi/mpiaijsbaij.c /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c /petsc/src/mat/impls/sbaij/mpi/sbstream/mpisbstream.c /petsc/src/mat/impls/sbaij/seq/aijsbaij.c /petsc/src/mat/impls/sbaij/seq/sbaij.c /petsc/src/mat/impls/sbaij/seq/sbstream/sbstream.c /petsc/src/mat/impls/sbaij/seq/sbstream/sbstrmfact.c /petsc/src/mat/impls/shell/shell.c /petsc/src/mat/impls/shell/shellcnv.c dlregismat.c /petsc/src/mat/order/amd/amd.c /petsc/src/mat/order/sorder.c /petsc/src/mat/order/sp1wd.c /petsc/src/mat/order/spectral.c /petsc/src/mat/order/spnd.c /petsc/src/mat/order/spqmd.c /petsc/src/mat/order/sprcm.c /petsc/src/mat/order/sregis.c /petsc/src/mat/order/wbm.c /petsc/src/mat/utils/convert.c /petsc/src/snes/examples/tests/ex69.c /petsc/src/snes/impls/nasm/aspin.c /petsc/src/snes/interface/snes.c /petsc/src/snes/mf/snesmfj.c /petsc/src/snes/utils/dmdasnes.c /petsc/src/sys/classes/draw/examples/tests/ex6.c /petsc/src/sys/classes/draw/examples/tests/makefile /petsc/src/sys/classes/draw/impls/opengl/openglops.c /petsc/src/sys/classes/draw/impls/x/drawopenx.c /petsc/src/sys/classes/draw/impls/x/makefile /petsc/src/sys/classes/draw/impls/x/xcolor.c /petsc/src/sys/classes/draw/impls/x/ximpl.h /petsc/src/sys/classes/draw/impls/x/xinit.c /petsc/src/sys/classes/draw/impls/x/xops.c /petsc/src/sys/classes/draw/impls/x/xtext.c /petsc/src/sys/classes/draw/impls/x/xtone.c /petsc/src/sys/classes/draw/impls/x/xwmap.c /petsc/src/sys/classes/draw/interface/dbuff.c /petsc/src/sys/classes/draw/interface/dclear.c /petsc/src/sys/classes/draw/interface/dcoor.c /petsc/src/sys/classes/draw/interface/dellipse.c /petsc/src/sys/classes/draw/interface/dflush.c /petsc/src/sys/classes/draw/interface/dline.c /petsc/src/sys/classes/draw/interface/dmarker.c /petsc/src/sys/classes/draw/interface/dmouse.c /petsc/src/sys/classes/draw/interface/dpause.c /petsc/src/sys/classes/draw/interface/dpoint.c /petsc/src/sys/classes/draw/interface/draw.c /petsc/src/sys/classes/draw/interface/drawreg.c /petsc/src/sys/classes/draw/interface/drect.c /petsc/src/sys/classes/draw/interface/dtext.c /petsc/src/sys/classes/draw/interface/dtri.c /petsc/src/sys/classes/draw/interface/dviewp.c /petsc/src/sys/classes/draw/interface/ftn-custom/makefile /petsc/src/sys/classes/draw/interface/ftn-custom/zdtextf.c /petsc/src/sys/classes/draw/interface/makefile /petsc/src/sys/classes/draw/utils/axisc.c /petsc/src/sys/classes/draw/utils/bars.c /petsc/src/sys/classes/draw/utils/cmap.c /petsc/src/sys/classes/draw/utils/cmap/coolwarm.h /petsc/src/sys/classes/draw/utils/cmap/inferno.h /petsc/src/sys/classes/draw/utils/cmap/magma.h /petsc/src/sys/classes/draw/utils/cmap/parula.h /petsc/src/sys/classes/draw/utils/cmap/plasma.h /petsc/src/sys/classes/draw/utils/cmap/viridis.h /petsc/src/sys/classes/draw/utils/dscatter.c /petsc/src/sys/classes/draw/utils/hists.c /petsc/src/sys/classes/draw/utils/lgc.c /petsc/src/sys/classes/draw/utils/makefile /petsc/src/sys/classes/draw/utils/zoom.c /petsc/src/sys/classes/viewer/impls/binary/binv.c /petsc/src/sys/classes/viewer/impls/draw/drawv.c /petsc/src/tao/complementarity/impls/asls/asfls.c /petsc/src/tao/complementarity/impls/asls/asils.c /petsc/src/tao/matrix/adamat.c /petsc/src/tao/matrix/makefile /petsc/src/ts/impls/arkimex/arkimex.c /petsc/src/ts/impls/explicit/ssp/ssp.c /petsc/src/ts/impls/implicit/alpha/alpha.c /petsc/src/ts/trajectory/impls/memory/trajmemory.c /petsc/src/vec/is/is/impls/block/block.c /petsc/src/vec/is/is/impls/general/general.c /petsc/src/vec/pf/impls/constant/const.c /petsc/src/vec/pf/impls/string/cstring.c /petsc/src/vec/vec/impls/mpi/commonmpvec.c /petsc/src/vec/vec/impls/mpi/pbvec.c /petsc/src/vec/vec/impls/mpi/pdvec.c /petsc/src/vec/vec/impls/seq/bvec2.c /petsc/src/vec/vec/impls/seq/seqcusp/cuspvecimpl.h /petsc/src/vec/vec/impls/seq/seqviennacl/viennaclvecimpl.h /petsc/src/vec/vec/utils/makefile
48a243b1	28-Feb-2016	Barry Smith <bsmith@mcs.anl.gov>	Add error check for users trying to use MPI-IO with MatView() which is not supported Reported-by: Hanqi Guo <hguo@anl.gov> matrix.c
c491578d	28-Feb-2016	Barry Smith <bsmith@mcs.anl.gov>	Merge branch 'maint' /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/examples/arch-linux-pkgs-64idx.py /petsc/include/petsc/finclude/petscksp.h /petsc/include/petsc/finclude/petsckspdef.h /petsc/include/petsc/finclude/petscts.h /petsc/include/petsc/private/characteristicimpl.h /petsc/include/petsc/private/dmnetworkimpl.h /petsc/include/petscdmnetwork.h /petsc/include/petscksp.h /petsc/include/petscmath.h /petsc/include/petscsys.h /petsc/include/petscts.h /petsc/lib/petsc/conf/bfort-petsc.txt /petsc/src/dm/examples/tutorials/ex5.c /petsc/src/dm/examples/tutorials/makefile /petsc/src/dm/examples/tutorials/output/ex5_1.out /petsc/src/dm/examples/tutorials/output/ex5_2.out /petsc/src/dm/impls/network/network.c /petsc/src/docs/tex/manual/part2.tex /petsc/src/docs/tex/petscapp.bib /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/ksp/examples/tutorials/ex52.c /petsc/src/ksp/ksp/examples/tutorials/ex62.c /petsc/src/ksp/ksp/examples/tutorials/makefile /petsc/src/ksp/ksp/examples/tutorials/output/ex18_3.out /petsc/src/ksp/ksp/examples/tutorials/output/ex23_3.out /petsc/src/ksp/ksp/examples/tutorials/output/ex2_pipecgrr.out /petsc/src/ksp/ksp/examples/tutorials/output/ex34_2.out /petsc/src/ksp/ksp/examples/tutorials/output/ex43_4.out /petsc/src/ksp/ksp/examples/tutorials/output/ex43_5.out /petsc/src/ksp/ksp/examples/tutorials/output/ex49_6.out /petsc/src/ksp/ksp/examples/tutorials/output/ex49_7.out /petsc/src/ksp/ksp/examples/tutorials/output/ex49_8.out /petsc/src/ksp/ksp/examples/tutorials/output/ex50_3.out /petsc/src/ksp/ksp/examples/tutorials/output/ex60_4.out /petsc/src/ksp/ksp/examples/tutorials/output/ex60_5.out /petsc/src/ksp/ksp/examples/tutorials/output/ex60_6.out /petsc/src/ksp/ksp/examples/tutorials/output/ex60_7.out /petsc/src/ksp/ksp/examples/tutorials/output/ex60_8.out /petsc/src/ksp/ksp/examples/tutorials/output/ex60_9.out /petsc/src/ksp/ksp/impls/cg/cg.c /petsc/src/ksp/ksp/impls/cg/makefile /petsc/src/ksp/ksp/impls/cg/pipecgrr/makefile /petsc/src/ksp/ksp/impls/cg/pipecgrr/pipecgrr.c /petsc/src/ksp/ksp/impls/fcg/fcg.c /petsc/src/ksp/ksp/impls/fcg/fcgimpl.h /petsc/src/ksp/ksp/impls/fcg/makefile /petsc/src/ksp/ksp/impls/fcg/pipefcg/makefile /petsc/src/ksp/ksp/impls/fcg/pipefcg/pipefcg.c /petsc/src/ksp/ksp/impls/fcg/pipefcg/pipefcgimpl.h /petsc/src/ksp/ksp/impls/gcr/makefile /petsc/src/ksp/ksp/impls/gcr/pipegcr/makefile /petsc/src/ksp/ksp/impls/gcr/pipegcr/pipegcr.c /petsc/src/ksp/ksp/impls/gcr/pipegcr/pipegcrimpl.h /petsc/src/ksp/ksp/impls/gmres/makefile /petsc/src/ksp/ksp/impls/gmres/pipefgmres/makefile /petsc/src/ksp/ksp/impls/gmres/pipefgmres/pipefgmres.c /petsc/src/ksp/ksp/impls/gmres/pipefgmres/pipefgmresimpl.h /petsc/src/ksp/ksp/interface/dlregisksp.c /petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/ksp/ksp/interface/itregis.c /petsc/src/mat/examples/tests/ex197.c /petsc/src/mat/examples/tests/makefile /petsc/src/mat/examples/tests/output/ex197_1.out /petsc/src/mat/examples/tests/output/ex197_2.out /petsc/src/mat/impls/aij/mpi/mumps/mumps.c matrix.c /petsc/src/snes/examples/tests/ex69.c /petsc/src/snes/examples/tutorials/ex15.c /petsc/src/snes/examples/tutorials/ex19.c /petsc/src/snes/examples/tutorials/ex30.c /petsc/src/snes/examples/tutorials/ex46.c /petsc/src/snes/examples/tutorials/ex5.c /petsc/src/snes/examples/tutorials/network/pflow/pf.c /petsc/src/ts/characteristic/interface/characteristic.c /petsc/src/ts/examples/tests/ex10.c /petsc/src/ts/examples/tests/ex2.c /petsc/src/ts/examples/tests/ex22.c /petsc/src/ts/examples/tests/ex25.c /petsc/src/ts/examples/tests/ex3.c /petsc/src/ts/examples/tests/ex4.c /petsc/src/ts/examples/tests/ex5.c /petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex1.c /petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex10.c /petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex2.c /petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex3.c /petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex4.c /petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex5.c /petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex5adj.c /petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex7.c /petsc/src/ts/examples/tutorials/eimex/allen_cahn.c /petsc/src/ts/examples/tutorials/eimex/ct_vdp_imex.c /petsc/src/ts/examples/tutorials/ex1.c /petsc/src/ts/examples/tutorials/ex10.c /petsc/src/ts/examples/tutorials/ex11.c /petsc/src/ts/examples/tutorials/ex11_sa.c /petsc/src/ts/examples/tutorials/ex12.c /petsc/src/ts/examples/tutorials/ex13.c /petsc/src/ts/examples/tutorials/ex14.c /petsc/src/ts/examples/tutorials/ex15.c /petsc/src/ts/examples/tutorials/ex16.c /petsc/src/ts/examples/tutorials/ex16opt_ic.c /petsc/src/ts/examples/tutorials/ex16opt_p.c /petsc/src/ts/examples/tutorials/ex17.c /petsc/src/ts/examples/tutorials/ex18.c /petsc/src/ts/examples/tutorials/ex19.c /petsc/src/ts/examples/tutorials/ex1f.F /petsc/src/ts/examples/tutorials/ex2.c /petsc/src/ts/examples/tutorials/ex20.c /petsc/src/ts/examples/tutorials/ex20adj.c /petsc/src/ts/examples/tutorials/ex20opt_ic.c /petsc/src/ts/examples/tutorials/ex20opt_p.c /petsc/src/ts/examples/tutorials/ex21.c /petsc/src/ts/examples/tutorials/ex22.c /petsc/src/ts/examples/tutorials/ex22f.F /petsc/src/ts/examples/tutorials/ex22f_mf.F90 /petsc/src/ts/examples/tutorials/ex24.c /petsc/src/ts/examples/tutorials/ex25.c /petsc/src/ts/examples/tutorials/ex26.c /petsc/src/ts/examples/tutorials/ex27.c /petsc/src/ts/examples/tutorials/ex29.c /petsc/src/ts/examples/tutorials/ex3.c /petsc/src/ts/examples/tutorials/ex34.c /petsc/src/ts/examples/tutorials/ex35.cxx /petsc/src/ts/examples/tutorials/ex36.c /petsc/src/ts/examples/tutorials/ex36A.c /petsc/src/ts/examples/tutorials/ex36SE.c /petsc/src/ts/examples/tutorials/ex4.c /petsc/src/ts/examples/tutorials/ex40.c /petsc/src/ts/examples/tutorials/ex41.c /petsc/src/ts/examples/tutorials/ex42.c /petsc/src/ts/examples/tutorials/ex5.c /petsc/src/ts/examples/tutorials/ex6.c /petsc/src/ts/examples/tutorials/ex7.c /petsc/src/ts/examples/tutorials/ex8.c /petsc/src/ts/examples/tutorials/ex9.c /petsc/src/ts/examples/tutorials/extchem.c /petsc/src/ts/examples/tutorials/extchemfield.c /petsc/src/ts/examples/tutorials/makefile /petsc/src/ts/examples/tutorials/network/wash/pipes1.c /petsc/src/ts/examples/tutorials/output/ex5_1.out /petsc/src/ts/examples/tutorials/power_grid/ex1.c /petsc/src/ts/examples/tutorials/power_grid/ex2.c /petsc/src/ts/examples/tutorials/power_grid/ex3.c /petsc/src/ts/examples/tutorials/power_grid/ex3adj.c /petsc/src/ts/examples/tutorials/power_grid/ex3opt.c /petsc/src/ts/examples/tutorials/power_grid/ex3opt_fd.c /petsc/src/ts/examples/tutorials/power_grid/ex5.c /petsc/src/ts/examples/tutorials/power_grid/ex6.c /petsc/src/ts/examples/tutorials/power_grid/ex9.c /petsc/src/ts/examples/tutorials/power_grid/ex9adj.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9bus.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busadj.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt_fd.c /petsc/src/ts/impls/arkimex/arkimex.c /petsc/src/ts/impls/explicit/euler/euler.c /petsc/src/ts/interface/ts.c /petsc/src/ts/interface/tscreate.c
034cca04	26-Feb-2016	Barry Smith <bsmith@mcs.anl.gov>	Provide a default MatMultHermitianTransposeAdd() Time: .2 hours Reported-by: Michele De Stefano <MStefano@slb.com> /petsc/config/BuildSystem/RDict.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/BuildSystem/config/packages/metis.py /petsc/config/BuildSystem/config/packages/parmetis.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/options/dataFilesPath.py /petsc/config/examples/arch-linux-gcc-ifc-cmplx.py /petsc/config/examples/arch-pardiso.py /petsc/include/petsc/mpiuni/mpi.h /petsc/include/petscmath.h /petsc/src/dm/impls/da/dagetelem.c /petsc/src/dm/impls/da/daindex.c /petsc/src/dm/impls/da/ftn-custom/makefile /petsc/src/dm/impls/da/ftn-custom/zdaindexf.c /petsc/src/ksp/ksp/examples/tutorials/ex2.c /petsc/src/ksp/ksp/examples/tutorials/makefile /petsc/src/ksp/ksp/examples/tutorials/output/ex2_groppcg.out /petsc/src/ksp/ksp/examples/tutorials/output/ex2_pipecg.out /petsc/src/ksp/ksp/examples/tutorials/output/ex2_pipecr.out /petsc/src/ksp/ksp/impls/cg/cg.c /petsc/src/ksp/ksp/impls/cg/cgne/cgne.c /petsc/src/ksp/ksp/impls/cg/groppcg/groppcg.c /petsc/src/ksp/ksp/impls/cg/pipecg/pipecg.c /petsc/src/ksp/ksp/impls/cr/pipecr/pipecr.c /petsc/src/ksp/ksp/impls/fcg/fcg.c /petsc/src/ksp/pc/impls/hypre/hypre.c /petsc/src/mat/examples/tests/ex193.c /petsc/src/mat/examples/tests/makefile matrix.c /petsc/src/snes/impls/nasm/aspin.c /petsc/src/sys/mpiuni/fsrc/makefile /petsc/src/sys/mpiuni/mpi.c /petsc/src/ts/impls/arkimex/arkimex.c /petsc/src/ts/impls/explicit/euler/euler.c /petsc/src/ts/impls/explicit/rk/ftn-custom/makefile /petsc/src/ts/impls/explicit/rk/ftn-custom/zrkf.c /petsc/src/ts/impls/explicit/rk/rk.c /petsc/src/ts/impls/rosw/rosw.c
127e212f	25-Feb-2016	Mark Adams <cal2princeton@yahoo.com>	added comments about rigid body modes to MatSetNearNullSpace /petsc/bin/maint/builddist /petsc/bin/maint/runhtml.py /petsc/config/BuildSystem/config/packages/SuperLU.py /petsc/config/BuildSystem/config/packages/alquimia.py /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/options/installDir.py /petsc/config/install.py /petsc/include/petsc/mpiuni/mpi.h /petsc/include/petsc/private/kspimpl.h /petsc/include/petscdraw.h /petsc/makefile /petsc/share/petsc/saws/linearsolveroptions.html /petsc/src/dm/impls/da/daindex.c /petsc/src/dm/impls/da/ftn-custom/makefile /petsc/src/dm/impls/da/ftn-custom/zdaindexf.c /petsc/src/docs/tao_tex/tutorials/nersc/n02.tex /petsc/src/docs/tao_tex/tutorials/nersc/n03.tex /petsc/src/docs/tao_tex/tutorials/nersc/n04.tex /petsc/src/docs/tao_tex/tutorials/nersc/taoacts08.tex /petsc/src/docs/tao_tex/tutorials/nersc/taoacts09.tex /petsc/src/docs/tao_tex/tutorials/nersc/taoacts10.tex /petsc/src/docs/tao_tex/tutorials/nersc/taoacts11.tex /petsc/src/docs/tao_tex/tutorials/nersc/taoacts12.tex /petsc/src/docs/tex/manual/part2.tex /petsc/src/docs/website/index.html /petsc/src/ksp/ksp/examples/tutorials/makefile /petsc/src/ksp/ksp/examples/tutorials/output/ex2_groppcg.out /petsc/src/ksp/ksp/examples/tutorials/output/ex2_pipecg.out /petsc/src/ksp/ksp/examples/tutorials/output/ex2_pipecr.out /petsc/src/ksp/ksp/impls/cg/cg.c /petsc/src/ksp/ksp/impls/cg/groppcg/groppcg.c /petsc/src/ksp/ksp/impls/cg/pipecg/pipecg.c /petsc/src/ksp/ksp/impls/cr/pipecr/pipecr.c /petsc/src/ksp/ksp/impls/fcg/fcg.c /petsc/src/ksp/ksp/interface/dlregisksp.c /petsc/src/ksp/pc/impls/bddc/bddc.c /petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c /petsc/src/ksp/pc/impls/mg/mgfunc.c /petsc/src/mat/examples/tests/ex94.c /petsc/src/mat/examples/tests/makefile /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/baij/mpi/mpibaij.c /petsc/src/mat/impls/dense/mpi/mpidense.c /petsc/src/mat/impls/dense/seq/dense.c /petsc/src/mat/impls/dense/seq/dense.h /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c matrix.c /petsc/src/sys/classes/draw/impls/x/xops.c /petsc/src/ts/impls/arkimex/arkimex.c /petsc/src/ts/impls/explicit/euler/euler.c /petsc/src/ts/impls/explicit/rk/ftn-custom/makefile /petsc/src/ts/impls/explicit/rk/ftn-custom/zrkf.c /petsc/src/ts/impls/explicit/rk/rk.c /petsc/src/ts/impls/rosw/rosw.c /petsc/tutorials/HandsOnExercise.html /petsc/tutorials/TAOHandsOnExercise.html
de7e0af5	16-Feb-2016	Barry Smith <bsmith@mcs.anl.gov>	Added documentation for needed ISLocalToGlobalMapping for matrices from MatGetLocalSubMatrix() and error checking Reported-by: Jared Crean <jcrean01@gmail.com> /petsc/config/BuildSystem/RDict.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/MOAB.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/BuildSystem/config/packages/OpenMPI.py /petsc/config/BuildSystem/config/packages/PTScotch.py /petsc/config/BuildSystem/config/packages/PaStiX.py /petsc/config/BuildSystem/config/packages/Trilinos.py /petsc/config/BuildSystem/config/packages/Zoltan.py /petsc/config/BuildSystem/config/packages/alquimia.py /petsc/config/BuildSystem/config/packages/amanzi.py /petsc/config/BuildSystem/config/packages/ascem-io.py /petsc/config/BuildSystem/config/packages/boost.py /petsc/config/BuildSystem/config/packages/concurrencykit.py /petsc/config/BuildSystem/config/packages/elemental.py /petsc/config/BuildSystem/config/packages/exodusii.py /petsc/config/BuildSystem/config/packages/f2cblaslapack.py /petsc/config/BuildSystem/config/packages/fblaslapack.py /petsc/config/BuildSystem/config/packages/make.py /petsc/config/BuildSystem/config/packages/mstk.py /petsc/config/BuildSystem/config/packages/pflotran.py /petsc/config/BuildSystem/config/packages/unittestcpp.py /petsc/config/BuildSystem/config/packages/viennacl.py /petsc/config/BuildSystem/config/programs.py /petsc/config/BuildSystem/config/sourceControl.py /petsc/config/BuildSystem/retrieval.py /petsc/config/BuildSystem/script.py /petsc/config/PETSc/Configure.py /petsc/config/builder.py /petsc/config/configure.py /petsc/config/examples/arch-linux-gcc-ifc-cmplx.py /petsc/config/examples/arch-osx-xsdk-opt.py /petsc/config/examples/arch-pardiso.py /petsc/include/petsc/private/tsimpl.h /petsc/include/petsc/private/viewerimpl.h /petsc/include/petscblaslapack.h /petsc/include/petscblaslapack_mangle.h /petsc/include/petscpc.h /petsc/include/petscts.h /petsc/lib/petsc/conf/rules /petsc/src/dm/impls/da/dagetelem.c /petsc/src/dm/impls/plex/examples/tutorials/ex1f90.F /petsc/src/docs/tex/petsc.bib /petsc/src/docs/tex/petscapp.bib /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/docs/website/documentation/linearsolvertable.html /petsc/src/docs/website/documentation/tutorials/index.html /petsc/src/docs/website/index.html /petsc/src/ksp/ksp/examples/tests/makefile /petsc/src/ksp/ksp/examples/tutorials/ex2.c /petsc/src/ksp/ksp/impls/cg/cgls.c /petsc/src/ksp/ksp/impls/lsqr/lsqr.c /petsc/src/ksp/pc/impls/bicgstabcusp/bicgstabcusp.cu /petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c /petsc/src/ksp/pc/impls/hypre/hypre.c /petsc/src/mat/examples/tests/ex125.c /petsc/src/mat/examples/tests/ex9.c /petsc/src/mat/examples/tests/output/ex9_2.out /petsc/src/mat/examples/tests/output/ex9_3.out /petsc/src/mat/examples/tests/output/ex9_3_baij.out /petsc/src/mat/examples/tests/output/ex9_3_sbaij.out /petsc/src/mat/examples/tests/output/ex9_4_baij.out /petsc/src/mat/examples/tests/output/ex9_4_sbaij.out /petsc/src/mat/impls/aij/seq/umfpack/umfpack.c /petsc/src/mat/impls/localref/mlocalref.c matrix.c /petsc/src/snes/impls/vi/rs/virs.c /petsc/src/sys/classes/viewer/interface/viewa.c /petsc/src/ts/examples/tutorials/makefile /petsc/src/ts/examples/tutorials/power_grid/ex3adj.c /petsc/src/ts/examples/tutorials/power_grid/ex3opt.c /petsc/src/ts/examples/tutorials/power_grid/ex3opt_fd.c /petsc/src/ts/examples/tutorials/power_grid/ex9adj.c /petsc/src/ts/examples/tutorials/power_grid/ex9opt.c /petsc/src/ts/examples/tutorials/power_grid/output/ex3opt_1.out /petsc/src/ts/examples/tutorials/power_grid/output/ex3opt_fd_1.out /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/output/ex9busadj_1.out /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/output/ex9busopt_1.out /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/output/ex9busopt_fd_1.out /petsc/src/ts/impls/explicit/rk/rk.c /petsc/src/ts/impls/implicit/theta/theta.c /petsc/src/ts/interface/ts.c /petsc/src/ts/interface/tscreate.c /petsc/src/ts/trajectory/impls/memory/trajmemory.c /petsc/src/ts/trajectory/interface/traj.c /petsc/src/vec/is/is/utils/isdiff.c
2b92fee5	27-Jan-2016	Barry Smith <bsmith@mcs.anl.gov>	Merge branch 'barry/fix-log-summary-format' /petsc/config/examples/arch-osx-xsdk-opt.py /petsc/include/petscmat.h /petsc/include/petscviewer.h /petsc/src/dm/examples/tests/ex21.c /petsc/src/dm/examples/tests/ex23.c /petsc/src/dm/examples/tests/ex36.c /petsc/src/dm/examples/tutorials/ex7.c /petsc/src/dm/impls/da/gr2.c /petsc/src/dm/impls/plex/examples/tests/ex15.c /petsc/src/dm/impls/plex/examples/tutorials/ex1.c /petsc/src/dm/impls/plex/examples/tutorials/ex1f90.F /petsc/src/docs/tex/manual/part2.tex /petsc/src/docs/website/documentation/changes/34.html /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/ksp/examples/tests/ex22.c /petsc/src/ksp/ksp/examples/tutorials/ex4.c /petsc/src/ksp/ksp/examples/tutorials/ex54.c /petsc/src/ksp/ksp/examples/tutorials/ex55.c /petsc/src/ksp/ksp/examples/tutorials/ex56.c /petsc/src/ksp/ksp/interface/itcl.c /petsc/src/ksp/pc/impls/bddc/bddcprivate.c /petsc/src/ksp/pc/impls/gamg/agg.c /petsc/src/ksp/pc/impls/gamg/gamg.c /petsc/src/ksp/pc/impls/is/nn/nn.c /petsc/src/mat/examples/tests/ex122.c /petsc/src/mat/examples/tests/ex151.c /petsc/src/mat/examples/tests/ex16.c /petsc/src/mat/examples/tests/ex165.c /petsc/src/mat/examples/tests/ex166.c /petsc/src/mat/examples/tests/ex173.c /petsc/src/mat/examples/tests/ex181.c /petsc/src/mat/examples/tests/ex191.c /petsc/src/mat/examples/tests/ex194.c /petsc/src/mat/examples/tests/ex2.c /petsc/src/mat/examples/tests/ex20.c /petsc/src/mat/examples/tests/ex37.c /petsc/src/mat/examples/tests/ex4.c /petsc/src/mat/examples/tests/ex5.c /petsc/src/mat/examples/tests/ex58.c /petsc/src/mat/examples/tests/ex59.c /petsc/src/mat/examples/tests/ex68.c /petsc/src/mat/examples/tests/ex9.c /petsc/src/mat/impls/dense/mpi/mpidense.c matrix.c /petsc/src/snes/examples/tutorials/ex61view.c /petsc/src/snes/interface/noise/snesnoise.c /petsc/src/snes/interface/snes.c /petsc/src/snes/linesearch/interface/linesearch.c /petsc/src/sys/classes/random/interface/randomc.c /petsc/src/sys/classes/viewer/impls/ascii/filev.c /petsc/src/sys/classes/viewer/impls/ascii/vcreatea.c /petsc/src/sys/classes/viewer/impls/binary/binv.c /petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c /petsc/src/sys/classes/viewer/impls/matlab/vmatlab.c /petsc/src/sys/classes/viewer/impls/vtk/vtkv.c /petsc/src/sys/classes/viewer/interface/ftn-custom/makefile /petsc/src/sys/classes/viewer/interface/ftn-custom/zviewaf.c /petsc/src/sys/classes/viewer/interface/ftn-custom/zviewasetf.c /petsc/src/sys/classes/viewer/interface/view.c /petsc/src/sys/classes/viewer/interface/viewa.c /petsc/src/sys/classes/viewer/interface/viewreg.c /petsc/src/sys/objects/pinit.c /petsc/src/ts/examples/tests/ex4.c /petsc/src/ts/examples/tutorials/ex9.c /petsc/src/ts/interface/ts.c /petsc/src/vec/vec/examples/tutorials/ex3.c /petsc/src/vec/vec/impls/seq/bvec2.c /petsc/src/vec/vec/interface/vector.c
d7ee760d	23-Jan-2016	Barry Smith <bsmith@mcs.anl.gov>	MatRegisterDestroy() does not exist but it is listed in manual pages /petsc/bin/maint/checkBuilds.py /petsc/bin/maint/confignightly/default /petsc/bin/maint/confignightly/grind3 /petsc/bin/maint/confignightly/ipro4 /petsc/bin/maint/wwwindex.py /petsc/config/BuildSystem/RDict.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/Trilinos.py /petsc/config/BuildSystem/config/packages/boost.py /petsc/config/BuildSystem/config/packages/make.py /petsc/config/BuildSystem/config/packages/metis.py /petsc/config/BuildSystem/config/packages/parmetis.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/BuildSystem/config/packages/revolve.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/PETSc/Configure.py 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6a9046bc	15-Jan-2016	Barry Smith <bsmith@mcs.anl.gov>	Deprecate PetscViewerSetFormat() since it better to use PetscViewerPush/PopFormat() and using PetscViewerSetFormat() can lead to confusing situations for users when later viewers do not recognize the Deprecate PetscViewerSetFormat() since it better to use PetscViewerPush/PopFormat() and using PetscViewerSetFormat() can lead to confusing situations for users when later viewers do not recognize the set format and thus do not produce any information. Reported-by: Jed Brown <jed@jedbrown.org> show more ... /petsc/bin/maint/confignightly/default /petsc/bin/maint/wwwindex.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/make.py /petsc/config/BuildSystem/config/packages/metis.py /petsc/config/BuildSystem/config/packages/parmetis.py /petsc/config/BuildSystem/config/packages/revolve.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/PETSc/Regression.py /petsc/config/builder.py /petsc/config/examples/arch-freebsd-pkgs-opt.py /petsc/config/examples/arch-linux-pkgs-opt.py /petsc/config/examples/arch-linux-pkgs-valgrind.py /petsc/config/examples/arch-osx-10.6-cxx-pkgs-opt.py /petsc/include/petsc/mpiuni/mpi.h /petsc/include/petsc/private/dmimpl.h /petsc/include/petsc/private/dmlabelimpl.h /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petscdm.h /petsc/include/petscdmlabel.h 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