objects - OpenGrok history log for /petsc/src/sys/objects

Revision	Date	Author	Comments (<<< Hide modified files) (Show modified files >>>)
1423471a	12-Feb-2015	Barry Smith <bsmith@mcs.anl.gov>	update docs for SAWs usage set variable size div (and color) for PETSc options selection box in SAWs /petsc/saws/js/PETSc.js /petsc/saws/readme aoptions.c
12655325	12-Feb-2015	Barry Smith <bsmith@mcs.anl.gov>	fixes to build from bad merge of new master /petsc/src/dm/impls/da/dacreate.c aoptions.c
76f543a4	11-Feb-2015	Jed Brown <jed@jedbrown.org>	Merge branch 'jed/assembly-perf' into jed/mat-assembly-perf Improve VecAssembly performance using BuildTwoSided * jed/assembly-perf: (27 commits) Vec: document when InsertMode cannot change betwe Merge branch 'jed/assembly-perf' into jed/mat-assembly-perf Improve VecAssembly performance using BuildTwoSided * jed/assembly-perf: (27 commits) Vec: document when InsertMode cannot change between reassemblies VecAssembly BTS: allow reassembly with proper subsets of comm BuildTwoSided: distinguish events BuildTwoSided vs BuildTwoSidedF MPI: check for MPIX_Ibarrier (e.g., BG/Q) VecAssembly BTS: enable by default, use -vec_assembly_bts 0 to disable VecAssembly BTS: allow proper subsets with VEC_SUBSET_OFF_PROC_ENTRIES VecAssembly BTS: VEC_SUBSET_OFF_PROC_ENTRIES elides global synchronization VecAssembly BTS: elide sending empty scalar/block stashes VecAssembly BTS: separate pending count for scalar and block stashes VecAssembly BTS: use PetscCommBuildTwoSidedFReq and MPI_Waitsome VecAssembly BTS: avoid copying data on receive by using pointer frames Sys BuildTwoSidedFReq: generalization to return requests VecAssembly: add more scalable implementation, -vec_assembly_bts Vec_MPI: remove unused members conflated with VecStash Sys: add PetscMergeMPIIntArray Sys PetscMergeIntArrayPair: fix PetscFunctionBegin and comment Sys BuildTwoSidedF_Ibarrier: less synchronous dynamic sparse data exchange Sys BuildTwoSidedF: build two-sided network with functions in rendezvous Sys BuildTwoSided test: extract datatype construction Sys BuildTwoSided: update test for non-contiguous types and verbose output ... show more ... /petsc/.mailmap /petsc/bin/maint/buildtest /petsc/bin/maint/generateetags.py /petsc/bin/maint/generatefortranstubs.py /petsc/bin/petscnagupgrade.py /petsc/bin/pythonscripts/PetscBinaryIO.py /petsc/conf/rules /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/packages/BlasLapack.py 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/petsc/src/dm/interface/dm.c /petsc/src/docs/website/download/index.html /petsc/src/ksp/ksp/impls/cg/cgeig.c /petsc/src/ksp/ksp/impls/cg/groppcg/groppcg.c /petsc/src/ksp/ksp/impls/cg/pipecg/pipecg.c /petsc/src/ksp/ksp/impls/cr/pipecr/pipecr.c /petsc/src/ksp/ksp/impls/lsqr/lsqr.c /petsc/src/ksp/ksp/interface/itcl.c /petsc/src/ksp/ksp/interface/itcreate.c /petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/ksp/ksp/utils/schurm.c /petsc/src/ksp/pc/impls/bjacobi/bjacobi.c /petsc/src/ksp/pc/impls/gamg/gamg.c /petsc/src/ksp/pc/impls/mg/mg.c /petsc/src/ksp/pc/interface/precon.c /petsc/src/mat/examples/tests/ex180.c /petsc/src/mat/examples/tests/ex99.c /petsc/src/mat/examples/tests/makefile /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/mpi/mumps/mumps.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/baij/mpi/mpibaij.c /petsc/src/mat/impls/baij/seq/baij.c /petsc/src/mat/impls/baij/seq/baij.h /petsc/src/mat/impls/maij/maij.c /petsc/src/mat/impls/mffd/mffd.c /petsc/src/mat/impls/nest/matnest.c /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c /petsc/src/mat/impls/sbaij/mpi/mpisbaij.h /petsc/src/mat/impls/sbaij/seq/sbaij.c /petsc/src/mat/impls/sbaij/seq/sbaij.h /petsc/src/mat/utils/axpy.c /petsc/src/snes/interface/snesj2.c /petsc/src/sys/classes/viewer/examples/tutorials/ex3.c /petsc/src/sys/classes/viewer/examples/tutorials/makefile /petsc/src/sys/classes/viewer/examples/tutorials/output/ex3_1_p1.out /petsc/src/sys/classes/viewer/examples/tutorials/output/ex3_1_p12.out /petsc/src/sys/classes/viewer/examples/tutorials/output/ex3_1_p6.out /petsc/src/sys/classes/viewer/examples/tutorials/output/ex3_2_p6.out /petsc/src/sys/classes/viewer/interface/dlregispetsc.c /petsc/src/sys/examples/tests/ex8.c /petsc/src/sys/examples/tests/makefile /petsc/src/sys/examples/tests/output/ex8_1.out pinit.c /petsc/src/sys/utils/mpits.c /petsc/src/sys/utils/sorti.c /petsc/src/tao/interface/fdiff.c /petsc/src/ts/adapt/interface/tsadapt.c /petsc/src/ts/impls/arkimex/arkimex.c /petsc/src/ts/impls/implicit/theta/theta.c /petsc/src/ts/impls/rosw/rosw.c /petsc/src/ts/interface/ts.c /petsc/src/vec/is/is/utils/isdiff.c /petsc/src/vec/is/sf/impls/basic/sfbasic.c /petsc/src/vec/is/sf/impls/window/sfwindow.c /petsc/src/vec/is/sf/interface/sf.c /petsc/src/vec/is/utils/pmap.c /petsc/src/vec/vec/examples/tests/ex29.c /petsc/src/vec/vec/examples/tests/makefile /petsc/src/vec/vec/examples/tutorials/ex6.c /petsc/src/vec/vec/impls/mpi/commonmpvec.c /petsc/src/vec/vec/impls/mpi/pbvec.c /petsc/src/vec/vec/impls/mpi/pdvec.c /petsc/src/vec/vec/impls/mpi/pvecimpl.h /petsc/src/vec/vec/interface/ftn-custom/zvectorf.c /petsc/src/vec/vec/interface/rvector.c /petsc/src/vec/vec/interface/vector.c /petsc/src/vec/vec/utils/vecio.c /petsc/src/vec/vec/utils/vecstash.c
a197972a	11-Feb-2015	Barry Smith <bsmith@mcs.anl.gov>	Merge branch 'master' into barry/saws-options-merge-master Totally confusing manual merge, could be wrong Conflicts: include/petscoptions.h src/dm/impls/da/dacreate.c src/sys/objects/aoptions.c Merge branch 'master' into barry/saws-options-merge-master Totally confusing manual merge, could be wrong Conflicts: include/petscoptions.h src/dm/impls/da/dacreate.c src/sys/objects/aoptions.c src/sys/threadcomm/interface/threadcomm.c show more ... /petsc/.gitignore /petsc/.hgignore /petsc/.mailmap /petsc/CONTRIBUTING /petsc/LICENSE /petsc/bin/FASTMathInstaller.py /petsc/bin/configVars.py /petsc/bin/maint/PetscStaticFunctionCandidates.py /petsc/bin/maint/builddist /petsc/bin/maint/buildtest /petsc/bin/maint/confignightly/cg /petsc/bin/maint/confignightly/cg2 /petsc/bin/maint/findvisibleprivatefunctions /petsc/bin/maint/generateetags.py /petsc/bin/maint/generatefortranstubs.py /petsc/bin/maint/generators/matlab.py /petsc/bin/maint/rebuildtar 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fb913d1a	09-Feb-2015	Barry Smith <bsmith@mcs.anl.gov>	Merge branch 'barry/update-saws' /petsc/config/BuildSystem/config/packages/SuiteSparse.py /petsc/config/BuildSystem/config/packages/sowing.py /petsc/config/builder.py /petsc/include/petsc-finclude/ftn-custom/petscsnes.h90 /petsc/include/petsc-finclude/petsctsdef.h /petsc/include/petsc-private/matimpl.h /petsc/include/petsc-private/tsimpl.h /petsc/include/petscts.h /petsc/lib/petsc-conf/bfort-petsc.txt /petsc/src/dm/impls/da/fdda.c /petsc/src/docs/tex/manual/part2.tex /petsc/src/docs/website/documentation/installation.html /petsc/src/ksp/pc/impls/bddc/bddc.h /petsc/src/ksp/pc/impls/bddc/bddcprivate.c /petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c /petsc/src/mat/examples/tests/ex59.c /petsc/src/mat/examples/tests/makefile /petsc/src/mat/examples/tests/output/ex59_1.out /petsc/src/mat/examples/tests/output/ex59_1_baij.out /petsc/src/mat/examples/tests/output/ex59_1_sbaij.out /petsc/src/mat/examples/tests/output/ex59_2.out /petsc/src/mat/examples/tests/output/ex59_2_baij.out /petsc/src/mat/examples/tests/output/ex59_2_sbaij.out /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/baij/mpi/mpibaij.c /petsc/src/mat/impls/baij/seq/baij.h /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c /petsc/src/mat/impls/sbaij/mpi/mpisbaij.h /petsc/src/mat/impls/sbaij/seq/sbaij.h /petsc/src/mat/impls/sbaij/seq/sbaij2.c /petsc/src/mat/interface/dlregismat.c /petsc/src/mat/interface/matrix.c /petsc/src/snes/examples/tutorials/ex48.c /petsc/src/snes/impls/gs/snesgs.c /petsc/src/snes/impls/ls/ls.c /petsc/src/snes/interface/snes.c /petsc/src/snes/utils/dmdasnes.c /petsc/src/sys/classes/viewer/impls/ams/amsopen.c /petsc/src/sys/fileio/mprint.c aoptions.c /petsc/src/ts/examples/tutorials/ex11_sa.c /petsc/src/ts/examples/tutorials/ex16adj.c /petsc/src/ts/examples/tutorials/ex16opt_ic.c /petsc/src/ts/examples/tutorials/ex16opt_p.c /petsc/src/ts/examples/tutorials/ex19.c /petsc/src/ts/examples/tutorials/ex20adj.c /petsc/src/ts/examples/tutorials/ex20opt_ic.c /petsc/src/ts/examples/tutorials/ex20opt_p.c /petsc/src/ts/examples/tutorials/ex31.c /petsc/src/ts/examples/tutorials/ex9_sa.c /petsc/src/ts/examples/tutorials/makefile /petsc/src/ts/examples/tutorials/output/ex16_sa_1.out /petsc/src/ts/examples/tutorials/output/ex16adj_1.out /petsc/src/ts/examples/tutorials/output/ex16opt_ic_1.out /petsc/src/ts/examples/tutorials/output/ex16opt_p_1.out /petsc/src/ts/examples/tutorials/power_grid/ex1.c /petsc/src/ts/examples/tutorials/power_grid/ex2.c /petsc/src/ts/examples/tutorials/power_grid/ex3.c /petsc/src/ts/examples/tutorials/power_grid/ex3adj.c /petsc/src/ts/examples/tutorials/power_grid/ex3opt.c /petsc/src/ts/examples/tutorials/power_grid/ex3opt_fd.c /petsc/src/ts/examples/tutorials/power_grid/ex6.c /petsc/src/ts/examples/tutorials/power_grid/ex7.c /petsc/src/ts/examples/tutorials/power_grid/makefile /petsc/src/ts/examples/tutorials/power_grid/output/ex1_1.out /petsc/src/ts/examples/tutorials/power_grid/output/ex1_2.out /petsc/src/ts/examples/tutorials/power_grid/output/ex2_1.out /petsc/src/ts/examples/tutorials/power_grid/output/ex3adj_1.out /petsc/src/ts/examples/tutorials/power_grid/output/ex3opt_1.out /petsc/src/ts/examples/tutorials/power_grid/output/ex3opt_fd_1.out /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9bus.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busadj.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt_fd.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/makefile /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/output/ex9busadj_1.out /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/output/ex9busopt_1.out /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/output/ex9busopt_fd_1.out /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/petscoptions /petsc/src/ts/impls/arkimex/arkimex.c /petsc/src/ts/impls/explicit/rk/rk.c /petsc/src/ts/impls/implicit/theta/theta.c /petsc/src/ts/impls/rosw/rosw.c /petsc/src/ts/interface/dlregists.c /petsc/src/ts/interface/ts.c /petsc/src/ts/makefile /petsc/src/ts/trajectory/impls/basic/makefile /petsc/src/ts/trajectory/impls/basic/trajbasic.c /petsc/src/ts/trajectory/impls/makefile /petsc/src/ts/trajectory/interface/makefile /petsc/src/ts/trajectory/interface/traj.c /petsc/src/ts/trajectory/makefile /petsc/src/vec/vec/interface/vector.c /petsc/tutorials/HandsOnExercise.html
f7b25cf6	07-Feb-2015	Barry Smith <bsmith@mcs.anl.gov>	update SAWS interface to work with thread safe options processing /petsc/config/BuildSystem/config/packages/ml.py /petsc/config/builder.py /petsc/include/petsc-finclude/ftn-custom/petscsnes.h90 /petsc/include/petsc-private/matimpl.h /petsc/include/petscpc.h /petsc/lib/petsc-conf/test /petsc/makefile /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/impls/da/fdda.c /petsc/src/docs/tex/manual/part2.tex /petsc/src/docs/website/documentation/installation.html /petsc/src/ksp/ksp/examples/tutorials/makefile /petsc/src/ksp/pc/impls/bddc/bddc.h /petsc/src/ksp/pc/impls/bddc/bddcprivate.c /petsc/src/ksp/pc/impls/bddc/makefile /petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c /petsc/src/ksp/pc/interface/pcregis.c /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/seq/crl/ftn-kernels/fmultcrl.h /petsc/src/mat/impls/aij/seq/ftn-kernels/fmult.h /petsc/src/mat/impls/aij/seq/ftn-kernels/fmultadd.h /petsc/src/mat/interface/dlregismat.c /petsc/src/mat/interface/matrix.c /petsc/src/snes/examples/tutorials/ex48.c /petsc/src/snes/impls/gs/snesgs.c /petsc/src/snes/interface/snes.c /petsc/src/snes/utils/dmdasnes.c /petsc/src/sys/classes/viewer/impls/ams/amsopen.c /petsc/src/sys/fileio/mprint.c aoptions.c /petsc/src/ts/examples/tutorials/ex31.c /petsc/src/ts/interface/ts.c
306c2d5b	05-Feb-2015	Barry Smith <bsmith@mcs.anl.gov>	minor cleanup of PetscSubcomm code and documentation /petsc/config/BuildSystem/config/packages/ml.py /petsc/include/petscpc.h /petsc/include/petscsys.h /petsc/lib/petsc-conf/test /petsc/makefile /petsc/src/dm/dt/interface/dtfe.c /petsc/src/ksp/ksp/examples/tutorials/makefile /petsc/src/ksp/pc/impls/bddc/bddcprivate.c /petsc/src/ksp/pc/impls/bddc/bddcscalingbasic.c /petsc/src/ksp/pc/impls/bddc/makefile /petsc/src/ksp/pc/impls/bjacobi/bjacobi.c /petsc/src/ksp/pc/impls/redundant/redundant.c /petsc/src/ksp/pc/interface/pcregis.c /petsc/src/mat/examples/tests/ex9.c /petsc/src/mat/impls/aij/seq/crl/ftn-kernels/fmultcrl.h /petsc/src/mat/impls/aij/seq/ftn-kernels/fmult.h /petsc/src/mat/impls/aij/seq/ftn-kernels/fmultadd.h /petsc/src/mat/interface/matrix.c subcomm.c /petsc/src/ts/interface/ts.c
a519f713	04-Feb-2015	Barry Smith <bsmith@mcs.anl.gov>	removed outdated use of %G /petsc/bin/maint/generatefortranstubs.py /petsc/bin/maint/toclapack.sh /petsc/bin/maint/wwwindex.py /petsc/bin/petsc-pythonscripts/PetscBinaryIO.py /petsc/config/BuildSystem/config/packages/MOAB.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/PaStiX.py /petsc/config/BuildSystem/config/packages/scalapack.py /petsc/config/BuildSystem/config/packages/sowing.py /petsc/config/PETSc/Configure.py /petsc/config/builder.py /petsc/include/petsc-finclude/petscdt.h90 /petsc/include/petsc-private/dmimpl.h /petsc/include/petsc-private/pcgamgimpl.h /petsc/include/petsc-private/vecimpl.h /petsc/include/petscdm.h /petsc/include/petscdmda.h /petsc/include/petscdmredundant.h /petsc/include/petscerror.h /petsc/include/petscksp.h /petsc/include/petscmat.h /petsc/include/petscpc.h /petsc/include/petscsnes.h /petsc/include/petscsys.h /petsc/include/petscvec.h /petsc/include/petscversion.h /petsc/lib/petsc-conf/bfort-base.txt /petsc/lib/petsc-conf/bfort-mpi.txt /petsc/lib/petsc-conf/bfort-petsc.txt /petsc/makefile /petsc/src/contrib/fun3d/comp/flow.c /petsc/src/dm/examples/tests/ex11.c /petsc/src/dm/examples/tests/ex19.c /petsc/src/dm/examples/tests/ex21.c /petsc/src/dm/examples/tests/ex36.c /petsc/src/dm/examples/tutorials/ex3.c /petsc/src/dm/impls/composite/pack.c /petsc/src/dm/impls/da/da.c /petsc/src/dm/impls/da/dacorn.c /petsc/src/dm/impls/da/dacreate.c /petsc/src/dm/impls/da/dageometry.c /petsc/src/dm/impls/da/dagetarray.c /petsc/src/dm/impls/da/dagtol.c /petsc/src/dm/impls/da/dainterp.c /petsc/src/dm/impls/da/dasub.c /petsc/src/dm/impls/da/gr2.c /petsc/src/dm/impls/da/hypre/mhyp.c /petsc/src/dm/impls/da/hypre/mhyp.h /petsc/src/dm/impls/moab/dmmoab.cxx /petsc/src/dm/impls/plex/examples/tests/ex4.c /petsc/src/dm/impls/plex/examples/tests/ex8.c /petsc/src/dm/impls/plex/examples/tests/output/ex1_2.out /petsc/src/dm/impls/plex/examples/tests/output/ex1_5.out /petsc/src/dm/impls/plex/examples/tests/output/ex1_9.out /petsc/src/dm/impls/plex/examples/tests/output/ex4_29.out /petsc/src/dm/impls/plex/examples/tests/output/ex4_30.out /petsc/src/dm/impls/plex/examples/tests/output/ex4_31.out /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/plex/plexcreate.c /petsc/src/dm/impls/plex/plexdistribute.c /petsc/src/dm/impls/plex/plexgmsh.c /petsc/src/dm/impls/plex/plexrefine.c /petsc/src/dm/impls/redundant/dmredundant.c /petsc/src/dm/interface/dm.c /petsc/src/dm/makefile /petsc/src/docs/tex/manual/part2.tex /petsc/src/docs/tex/petsc.bib /petsc/src/docs/tex/petscapp.bib /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/docs/website/download/index.html /petsc/src/docs/website/index.html /petsc/src/docs/website/publications/index.html /petsc/src/ksp/ksp/examples/tests/ex21.c /petsc/src/ksp/ksp/examples/tutorials/ex43.c /petsc/src/ksp/ksp/examples/tutorials/ex52.c /petsc/src/ksp/ksp/impls/fcg/fcg.c /petsc/src/ksp/ksp/impls/gmres/gmres.c /petsc/src/ksp/ksp/impls/preonly/preonly.c /petsc/src/ksp/ksp/interface/itcl.c /petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/ksp/ksp/utils/schurm.c /petsc/src/ksp/pc/examples/tests/ex5.c /petsc/src/ksp/pc/impls/bjacobi/bjacobi.c /petsc/src/ksp/pc/impls/gamg/gamg.c /petsc/src/ksp/pc/impls/hypre/hypre.c /petsc/src/ksp/pc/impls/mg/makefile /petsc/src/ksp/pc/impls/mg/mg.c /petsc/src/ksp/pc/impls/ml/ml.c /petsc/src/ksp/pc/interface/precon.c /petsc/src/mat/coarsen/coarsen.c /petsc/src/mat/coarsen/impls/hem/hem.c /petsc/src/mat/examples/tests/ex174.cxx /petsc/src/mat/examples/tests/ex99.c /petsc/src/mat/examples/tests/makefile /petsc/src/mat/examples/tests/output/ex174.out /petsc/src/mat/examples/tests/output/ex174_dense.out /petsc/src/mat/examples/tests/output/ex174_elemental.out /petsc/src/mat/examples/tests/output/ex174_sbaij.out /petsc/src/mat/impls/aij/mpi/fdmpiaij.c /petsc/src/mat/impls/aij/mpi/mkl_cpardiso/mkl_cpardiso.c /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/crl/crl.c /petsc/src/mat/impls/aij/seq/csrperm/csrperm.c /petsc/src/mat/impls/aij/seq/klu/klu.c /petsc/src/mat/impls/aij/seq/lusol/lusol.c /petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c /petsc/src/mat/impls/aij/seq/seqviennacl/aijviennacl.cxx /petsc/src/mat/impls/aij/seq/superlu/superlu.c /petsc/src/mat/impls/aij/seq/umfpack/umfpack.c /petsc/src/mat/impls/baij/seq/baij2.c /petsc/src/mat/impls/baij/seq/baijfact.c /petsc/src/mat/impls/dense/mpi/mpidense.c /petsc/src/mat/impls/dense/seq/dense.c /petsc/src/mat/impls/elemental/matelem.cxx /petsc/src/mat/impls/elemental/matelemimpl.h /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c /petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c /petsc/src/mat/impls/sbaij/seq/sbaij.c /petsc/src/mat/impls/sbaij/seq/sbaij2.c /petsc/src/mat/impls/sbaij/seq/sbaijfact2.c /petsc/src/mat/interface/matrix.c /petsc/src/snes/examples/tests/ex1.c /petsc/src/snes/examples/tests/ex12f.F /petsc/src/snes/examples/tests/ex15.c /petsc/src/snes/examples/tests/ex16.c /petsc/src/snes/examples/tests/ex17.c /petsc/src/snes/examples/tests/ex18f90.F90 /petsc/src/snes/examples/tests/ex1f.F /petsc/src/snes/examples/tests/ex68.c /petsc/src/snes/examples/tests/ex7.c /petsc/src/snes/examples/tests/ex8.c /petsc/src/snes/examples/tests/makefile /petsc/src/snes/examples/tests/output/ex18f90_1.out /petsc/src/snes/examples/tutorials/ex14.c /petsc/src/snes/examples/tutorials/ex15.c /petsc/src/snes/examples/tutorials/ex19.c /petsc/src/snes/examples/tutorials/ex1f.F /petsc/src/snes/examples/tutorials/ex3.c /petsc/src/snes/examples/tutorials/ex42.c /petsc/src/snes/examples/tutorials/ex48.c /petsc/src/snes/examples/tutorials/ex54.c /petsc/src/snes/examples/tutorials/ex59.c /petsc/src/snes/examples/tutorials/ex5s.c /petsc/src/snes/examples/tutorials/ex60.c 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/petsc/src/sys/classes/matlabengine/matlab.c /petsc/src/sys/classes/viewer/impls/binary/binv.c aoptions.c /petsc/src/sys/threadcomm/interface/threadcommred.c /petsc/src/sys/webclient/box.c /petsc/src/sys/webclient/globus.c /petsc/src/sys/webclient/google.c /petsc/src/sys/webclient/textbelt.c /petsc/src/tao/linesearch/impls/gpcglinesearch/gpcglinesearch.c /petsc/src/tao/pde_constrained/examples/tutorials/elliptic.c /petsc/src/ts/characteristic/interface/slregis.c /petsc/src/ts/examples/tests/ex2.c /petsc/src/ts/examples/tests/ex22.c /petsc/src/ts/examples/tests/ex25.c /petsc/src/ts/examples/tests/ex3.c /petsc/src/ts/examples/tests/ex4.c /petsc/src/ts/examples/tests/ex5.c /petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex1.c /petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex10.c /petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex2.c /petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex4.c /petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex5.c /petsc/src/ts/examples/tutorials/eimex/allen_cahn.c /petsc/src/ts/examples/tutorials/eimex/ct_vdp_imex.c /petsc/src/ts/examples/tutorials/ex1.c /petsc/src/ts/examples/tutorials/ex10.c /petsc/src/ts/examples/tutorials/ex13.c /petsc/src/ts/examples/tutorials/ex15.c /petsc/src/ts/examples/tutorials/ex16.c /petsc/src/ts/examples/tutorials/ex17.c /petsc/src/ts/examples/tutorials/ex19.c /petsc/src/ts/examples/tutorials/ex1f.F /petsc/src/ts/examples/tutorials/ex2.c /petsc/src/ts/examples/tutorials/ex20.c /petsc/src/ts/examples/tutorials/ex21.c /petsc/src/ts/examples/tutorials/ex22.c /petsc/src/ts/examples/tutorials/ex22f.F /petsc/src/ts/examples/tutorials/ex25.c /petsc/src/ts/examples/tutorials/ex27.c /petsc/src/ts/examples/tutorials/ex2f.F /petsc/src/ts/examples/tutorials/ex31.c /petsc/src/ts/examples/tutorials/ex34.c /petsc/src/ts/examples/tutorials/ex40.c /petsc/src/ts/examples/tutorials/ex41.c /petsc/src/ts/examples/tutorials/ex7.c /petsc/src/ts/examples/tutorials/ex8.c /petsc/src/ts/examples/tutorials/ex9.c /petsc/src/ts/examples/tutorials/phasefield/biharmonic.c /petsc/src/ts/examples/tutorials/phasefield/biharmonic2.c /petsc/src/ts/examples/tutorials/phasefield/biharmonic3.c /petsc/src/ts/examples/tutorials/phasefield/heat.c /petsc/src/ts/examples/tutorials/power_grid/ex1.c /petsc/src/ts/examples/tutorials/power_grid/ex2.c /petsc/src/ts/examples/tutorials/power_grid/ex5.c /petsc/src/ts/examples/tutorials/power_grid/ex6.c /petsc/src/ts/examples/tutorials/power_grid/ex7.c /petsc/src/ts/examples/tutorials/power_grid/ex8.c /petsc/src/ts/interface/ts.c /petsc/src/vec/is/is/utils/isdiff.c /petsc/src/vec/vec/impls/hypre/vhyp.c /petsc/src/vec/vec/impls/seq/seqcusp/cuspvecimpl.h /petsc/src/vec/vec/impls/seq/seqcusp/veccusp.cu /petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx /petsc/src/vec/vec/impls/seq/seqviennacl/viennaclvecimpl.h /petsc/src/vec/vec/interface/ftn-custom/zvectorf.c /petsc/src/vec/vec/interface/rvector.c /petsc/src/vec/vec/interface/vector.c /petsc/src/vec/vec/utils/vinv.c /petsc/src/vec/vec/utils/vscat.c /petsc/tutorials/HandsOnExercise.html
584b3052	24-Jan-2015	Barry Smith <bsmith@mcs.anl.gov>	Merge branch 'tisaac/feature-gamg-extensible' into barry/experiment Conflicts: src/ksp/pc/impls/gamg/gamg.h /petsc/bin/maint/buildtest /petsc/bin/maint/generatefortranstubs.py /petsc/bin/petsc-pythonscripts/petsc_gen_xdmf.py /petsc/config/BuildSystem/config/packages/ctetgen.py /petsc/config/BuildSystem/config/packages/f2cblaslapack.py /petsc/config/builder.py /petsc/config/gmakegen.py /petsc/config/install.py /petsc/gmakefile /petsc/include/petsc-private/pcgamgimpl.h /petsc/include/petsc-private/pcmgimpl.h /petsc/include/petsc-private/petscfeimpl.h /petsc/include/petsc-private/petscfvimpl.h /petsc/include/petsc.h /petsc/include/petscdmplex.h /petsc/include/petscds.h /petsc/include/petscdt.h /petsc/include/petscfe.h /petsc/include/petscfv.h /petsc/include/petscpc.h /petsc/include/petscsnes.h /petsc/include/petscts.h /petsc/makefile /petsc/setup.py /petsc/src/dm/dt/interface/dt.c /petsc/src/dm/dt/interface/dtds.c /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/dt/interface/dtfv.c /petsc/src/dm/impls/plex/examples/tests/ex1.c /petsc/src/dm/impls/plex/ftn-custom/makefile /petsc/src/dm/impls/plex/ftn-custom/zplexgmsh.c /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/plex/plexcreate.c /petsc/src/dm/impls/plex/plexdistribute.c /petsc/src/dm/impls/plex/plexexodusii.c /petsc/src/dm/impls/plex/plexfem.c /petsc/src/dm/impls/plex/plexgenerate.c /petsc/src/dm/impls/plex/plexgeometry.c /petsc/src/dm/impls/plex/plexgmsh.c /petsc/src/dm/impls/plex/plexhdf5.c /petsc/src/dm/impls/plex/plexlabel.c /petsc/src/dm/impls/plex/plexpoint.c /petsc/src/dm/impls/plex/plexrefine.c /petsc/src/dm/impls/plex/plexsubmesh.c /petsc/src/dm/interface/dm.c /petsc/src/docs/tex/petsc.bib /petsc/src/docs/tex/petscapp.bib /petsc/src/ksp/ksp/examples/tutorials/makefile /petsc/src/ksp/ksp/examples/tutorials/output/ex54_1.out /petsc/src/ksp/ksp/examples/tutorials/output/ex54_classical.out 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/petsc/src/mat/impls/baij/seq/baij.c /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c /petsc/src/mat/impls/sbaij/seq/sbaij.c /petsc/src/mat/interface/matrix.c /petsc/src/snes/examples/tutorials/ex12.c /petsc/src/snes/examples/tutorials/ex62.c /petsc/src/snes/examples/tutorials/output/ex62_10.out /petsc/src/snes/examples/tutorials/output/ex62_11.out /petsc/src/snes/examples/tutorials/output/ex62_12.out /petsc/src/snes/examples/tutorials/output/ex62_13.out /petsc/src/snes/examples/tutorials/output/ex62_14.out /petsc/src/snes/examples/tutorials/output/ex62_15.out /petsc/src/snes/examples/tutorials/output/ex62_16.out /petsc/src/snes/examples/tutorials/output/ex62_17.out /petsc/src/snes/examples/tutorials/output/ex62_18.out /petsc/src/snes/examples/tutorials/output/ex62_19.out /petsc/src/snes/examples/tutorials/output/ex62_20.out /petsc/src/snes/examples/tutorials/output/ex62_21.out /petsc/src/snes/examples/tutorials/output/ex62_22.out /petsc/src/snes/examples/tutorials/output/ex62_23.out /petsc/src/snes/examples/tutorials/output/ex62_24.out /petsc/src/snes/examples/tutorials/output/ex62_25.out /petsc/src/snes/examples/tutorials/output/ex62_26.out /petsc/src/snes/examples/tutorials/output/ex62_27.out /petsc/src/snes/examples/tutorials/output/ex62_28.out /petsc/src/snes/examples/tutorials/output/ex62_29.out /petsc/src/snes/examples/tutorials/output/ex62_30.out /petsc/src/snes/examples/tutorials/output/ex62_31.out /petsc/src/snes/examples/tutorials/output/ex62_32.out /petsc/src/snes/examples/tutorials/output/ex62_33.out /petsc/src/snes/examples/tutorials/output/ex62_34.out /petsc/src/snes/examples/tutorials/output/ex62_35.out /petsc/src/snes/examples/tutorials/output/ex62_36.out /petsc/src/snes/examples/tutorials/output/ex62_7.out /petsc/src/snes/examples/tutorials/output/ex62_8.out /petsc/src/snes/examples/tutorials/output/ex62_quad_q2p1_full.out /petsc/src/snes/examples/tutorials/output/ex62_quad_q2q1_full.out /petsc/src/snes/interface/snes.c /petsc/src/snes/utils/dmplexsnes.c pname.c /petsc/src/ts/examples/tutorials/ex11.c /petsc/src/ts/examples/tutorials/ex18.c /petsc/src/ts/examples/tutorials/output/ex11_10.out /petsc/src/ts/examples/tutorials/output/ex18_adv_0.out /petsc/src/ts/examples/tutorials/output/ex18_adv_1.out /petsc/src/ts/examples/tutorials/output/ex18_adv_2.out /petsc/src/ts/examples/tutorials/output/ex18_p1p1.out /petsc/src/ts/examples/tutorials/output/ex18_p1p1_xper.out /petsc/src/ts/examples/tutorials/output/ex18_p1p1_xper_ref.out /petsc/src/ts/examples/tutorials/output/ex18_p1p1_xyper.out /petsc/src/ts/examples/tutorials/output/ex18_p1p1_xyper_ref.out /petsc/src/ts/examples/tutorials/output/ex18_p2p1.out /petsc/src/ts/examples/tutorials/output/ex18_p2p1_xyper.out /petsc/src/ts/examples/tutorials/output/ex18_p2p1_xyper_ref.out /petsc/src/ts/utils/dmplexts.c /petsc/src/vec/is/sf/interface/sf.c
bd653fdc	21-Jan-2015	Barry Smith <bsmith@mcs.anl.gov>	Merge branch 'pr239/jeguyer/fix-matrix-market-export' /petsc/bin/maint/generatefortranstubs.py /petsc/config/BuildSystem/config/packages/SuiteSparse.py /petsc/config/BuildSystem/config/packages/ctetgen.py /petsc/config/BuildSystem/config/packages/f2cblaslapack.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/configure.py /petsc/config/examples/arch-linux-gcc-real-env.py /petsc/config/examples/arch-osx-10.6-cxx-env.py /petsc/config/gmakegen.py /petsc/config/install.py /petsc/gmakefile /petsc/makefile /petsc/setup.py /petsc/src/dm/impls/plex/ftn-custom/makefile /petsc/src/dm/impls/plex/ftn-custom/zplexgmsh.c /petsc/src/dm/impls/plex/plexgmsh.c /petsc/src/dm/impls/plex/plexlabel.c /petsc/src/dm/impls/plex/plexsubmesh.c /petsc/src/docs/tex/manual/acknowl.tex /petsc/src/docs/tex/petsc.bib /petsc/src/docs/tex/petscapp.bib /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/docs/website/documentation/linearsolvertable.html /petsc/src/docs/website/index.html /petsc/src/docs/website/miscellaneous/external.html /petsc/src/ksp/ksp/examples/tests/ex32.c /petsc/src/ksp/ksp/examples/tests/makefile /petsc/src/ksp/ksp/examples/tests/output/ex32_cholmod.out /petsc/src/ksp/ksp/examples/tests/output/ex32_cholmod_sbaij.out /petsc/src/ksp/ksp/examples/tutorials/makefile /petsc/src/ksp/ksp/examples/tutorials/output/ex54_1.out /petsc/src/ksp/ksp/examples/tutorials/output/ex54_classical.out /petsc/src/ksp/ksp/examples/tutorials/output/ex54f.out /petsc/src/ksp/ksp/examples/tutorials/output/ex55_0.out /petsc/src/ksp/ksp/examples/tutorials/output/ex55_NC.out /petsc/src/ksp/ksp/examples/tutorials/output/ex55_classical.out /petsc/src/ksp/ksp/examples/tutorials/output/ex55_sa.out /petsc/src/ksp/ksp/examples/tutorials/output/ex56_0.out /petsc/src/ksp/ksp/examples/tutorials/output/ex56_nns.out /petsc/src/ksp/ksp/impls/lsqr/lsqr.c /petsc/src/ksp/pc/impls/gamg/agg.c /petsc/src/ksp/pc/impls/gamg/gamg.c /petsc/src/mat/examples/tests/ex173.c /petsc/src/mat/examples/tests/makefile /petsc/src/mat/examples/tests/output/ex173_1.out /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/klu/klu.c /petsc/src/mat/impls/aij/seq/umfpack/umfpack.c /petsc/src/mat/impls/baij/mpi/mpibaij.c /petsc/src/mat/impls/baij/seq/baij.c /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c /petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c /petsc/src/mat/impls/sbaij/seq/sbaij.c /petsc/src/mat/interface/matrix.c /petsc/src/snes/examples/tutorials/makefile /petsc/src/snes/examples/tutorials/output/ex19_umfpack.out pname.c /petsc/src/vec/is/sf/interface/sf.c
8c34d3f5	20-Jan-2015	Barry Smith <bsmith@mcs.anl.gov>	simplify option object names /petsc/config/BuildSystem/config/packages/openmp.py /petsc/config/BuildSystem/config/packages/openmpclasses.py /petsc/config/PETSc/options/libraryOptions.py /petsc/include/petsc-private/dmimpl.h /petsc/include/petsc-private/kspimpl.h /petsc/include/petsc-private/linesearchimpl.h /petsc/include/petsc-private/matimpl.h /petsc/include/petsc-private/pcimpl.h /petsc/include/petsc-private/petscfeimpl.h /petsc/include/petsc-private/sfimpl.h /petsc/include/petsc-private/snesimpl.h /petsc/include/petsc-private/taoimpl.h /petsc/include/petsc-private/taolinesearchimpl.h /petsc/include/petsc-private/tsimpl.h /petsc/include/petsc-private/vecimpl.h /petsc/include/petsc-private/viewerimpl.h /petsc/include/petscoptions.h /petsc/include/petscts.h /petsc/include/petscviewer.h /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/impls/da/dacreate.c /petsc/src/dm/impls/network/networkcreate.c /petsc/src/dm/impls/patch/patchcreate.c /petsc/src/dm/impls/plex/plexcreate.c /petsc/src/ksp/ksp/examples/tests/makefile /petsc/src/ksp/ksp/examples/tutorials/ex61f.F90 /petsc/src/ksp/ksp/examples/tutorials/makefile /petsc/src/ksp/ksp/impls/bcgs/bcgs.c /petsc/src/ksp/ksp/impls/bcgs/bcgsimpl.h /petsc/src/ksp/ksp/impls/bcgsl/bcgsl.c /petsc/src/ksp/ksp/impls/cg/cg.c /petsc/src/ksp/ksp/impls/cg/cgne/cgne.c /petsc/src/ksp/ksp/impls/cg/gltr/gltr.c /petsc/src/ksp/ksp/impls/cg/nash/nash.c /petsc/src/ksp/ksp/impls/cg/stcg/stcg.c /petsc/src/ksp/ksp/impls/cheby/cheby.c /petsc/src/ksp/ksp/impls/fcg/fcg.c /petsc/src/ksp/ksp/impls/gcr/gcr.c /petsc/src/ksp/ksp/impls/gmres/agmres/agmres.c /petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c /petsc/src/ksp/ksp/impls/gmres/fgmres/fgmres.c /petsc/src/ksp/ksp/impls/gmres/gmres.c /petsc/src/ksp/ksp/impls/gmres/gmresimpl.h /petsc/src/ksp/ksp/impls/gmres/lgmres/lgmres.c /petsc/src/ksp/ksp/impls/gmres/pgmres/pgmres.c /petsc/src/ksp/ksp/impls/lcd/lcd.c /petsc/src/ksp/ksp/impls/lsqr/lsqr.c /petsc/src/ksp/ksp/impls/qcg/qcg.c /petsc/src/ksp/ksp/impls/rich/rich.c /petsc/src/ksp/ksp/impls/specest/specest.c /petsc/src/ksp/ksp/utils/schurm.c /petsc/src/ksp/pc/impls/ainvcusp/ainvcusp.cu /petsc/src/ksp/pc/impls/asm/asm.c /petsc/src/ksp/pc/impls/bddc/bddc.c /petsc/src/ksp/pc/impls/bicgstabcusp/bicgstabcusp.cu /petsc/src/ksp/pc/impls/bjacobi/bjacobi.c /petsc/src/ksp/pc/impls/composite/composite.c /petsc/src/ksp/pc/impls/cp/cp.c /petsc/src/ksp/pc/impls/eisens/eisen.c /petsc/src/ksp/pc/impls/factor/cholesky/cholesky.c /petsc/src/ksp/pc/impls/factor/factimpl.c /petsc/src/ksp/pc/impls/factor/factor.h /petsc/src/ksp/pc/impls/factor/icc/icc.c /petsc/src/ksp/pc/impls/factor/ilu/ilu.c /petsc/src/ksp/pc/impls/factor/lu/lu.c /petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c /petsc/src/ksp/pc/impls/gamg/agg.c /petsc/src/ksp/pc/impls/gamg/classical.c /petsc/src/ksp/pc/impls/gamg/gamg.c /petsc/src/ksp/pc/impls/gamg/gamg.h /petsc/src/ksp/pc/impls/gamg/geo.c /petsc/src/ksp/pc/impls/gasm/gasm.c /petsc/src/ksp/pc/impls/hypre/hypre.c /petsc/src/ksp/pc/impls/jacobi/jacobi.c /petsc/src/ksp/pc/impls/kaczmarz/kaczmarz.c /petsc/src/ksp/pc/impls/lsc/lsc.c /petsc/src/ksp/pc/impls/mg/mg.c /petsc/src/ksp/pc/impls/mg/mgimpl.h /petsc/src/ksp/pc/impls/ml/ml.c /petsc/src/ksp/pc/impls/parms/parms.c /petsc/src/ksp/pc/impls/redistribute/redistribute.c /petsc/src/ksp/pc/impls/redundant/redundant.c /petsc/src/ksp/pc/impls/sacusp/sacusp.cu /petsc/src/ksp/pc/impls/sacusp/sacusppoly.cu /petsc/src/ksp/pc/impls/sor/sor.c /petsc/src/ksp/pc/impls/spai/ispai.c /petsc/src/ksp/pc/impls/svd/svd.c /petsc/src/ksp/pc/impls/tfs/tfs.c /petsc/src/ksp/pc/impls/wb/wb.c /petsc/src/mat/color/impls/jp/jp.c /petsc/src/mat/impls/aij/mpi/mpicusp/mpiaijcusp.cu /petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu /petsc/src/mat/impls/aij/seq/seqcusp/aijcusp.cu /petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu /petsc/src/mat/impls/aij/seq/seqviennacl/aijviennacl.cxx /petsc/src/mat/impls/mffd/mffd.c /petsc/src/mat/impls/mffd/mffddef.c /petsc/src/mat/impls/mffd/mffdimpl.h /petsc/src/mat/impls/mffd/wp.c /petsc/src/mat/partition/impls/chaco/chaco.c /petsc/src/mat/partition/impls/party/party.c /petsc/src/mat/partition/impls/pmetis/pmetis.c /petsc/src/mat/partition/impls/scotch/scotch.c /petsc/src/snes/impls/composite/snescomposite.c /petsc/src/snes/impls/fas/fas.c /petsc/src/snes/impls/gs/snesgs.c /petsc/src/snes/impls/ls/ls.c /petsc/src/snes/impls/ms/ms.c /petsc/src/snes/impls/multiblock/multiblock.c /petsc/src/snes/impls/nasm/nasm.c /petsc/src/snes/impls/ncg/snesncg.c /petsc/src/snes/impls/ngmres/anderson.c /petsc/src/snes/impls/ngmres/snesngmres.c /petsc/src/snes/impls/qn/qn.c /petsc/src/snes/impls/richardson/snesrichardson.c /petsc/src/snes/impls/shell/snesshell.c /petsc/src/snes/impls/test/snestest.c /petsc/src/snes/impls/tr/tr.c /petsc/src/snes/impls/vi/ss/viss.c /petsc/src/snes/impls/vi/vi.c /petsc/src/snes/linesearch/impls/bt/linesearchbt.c /petsc/src/sys/classes/random/interface/randomc.c /petsc/src/sys/classes/random/randomimpl.h /petsc/src/sys/classes/viewer/impls/draw/drawv.c /petsc/src/sys/classes/viewer/impls/socket/send.c aoptions.c /petsc/src/sys/threadcomm/interface/threadcommregi.c /petsc/src/tao/bound/impls/blmvm/blmvm.c /petsc/src/tao/bound/impls/bqpip/bqpip.c /petsc/src/tao/bound/impls/gpcg/gpcg.c /petsc/src/tao/bound/impls/tron/tron.c /petsc/src/tao/complementarity/impls/ssls/ssls.c /petsc/src/tao/complementarity/impls/ssls/ssls.h /petsc/src/tao/constrained/impls/ipm/ipm.c /petsc/src/tao/interface/fdtest.c /petsc/src/tao/leastsquares/impls/pounders/pounders.c /petsc/src/tao/linesearch/impls/armijo/armijo.c /petsc/src/tao/linesearch/impls/morethuente/morethuente.c /petsc/src/tao/linesearch/impls/owarmijo/owarmijo.c /petsc/src/tao/linesearch/impls/unit/unit.c /petsc/src/tao/pde_constrained/impls/lcl/lcl.c /petsc/src/tao/unconstrained/impls/bmrm/bmrm.c /petsc/src/tao/unconstrained/impls/cg/taocg.c /petsc/src/tao/unconstrained/impls/lmvm/lmvm.c /petsc/src/tao/unconstrained/impls/neldermead/neldermead.c /petsc/src/tao/unconstrained/impls/nls/nls.c /petsc/src/tao/unconstrained/impls/ntl/ntl.c /petsc/src/tao/unconstrained/impls/ntr/ntr.c /petsc/src/tao/unconstrained/impls/owlqn/owlqn.c /petsc/src/ts/adapt/impls/basic/adaptbasic.c /petsc/src/ts/adapt/impls/cfl/adaptcfl.c /petsc/src/ts/adapt/interface/tsadapt.c /petsc/src/ts/examples/tests/ex10.c /petsc/src/ts/impls/arkimex/arkimex.c /petsc/src/ts/impls/eimex/eimex.c /petsc/src/ts/impls/explicit/euler/euler.c /petsc/src/ts/impls/explicit/rk/rk.c /petsc/src/ts/impls/explicit/ssp/ssp.c /petsc/src/ts/impls/implicit/alpha/alpha.c /petsc/src/ts/impls/implicit/gl/gl.c /petsc/src/ts/impls/implicit/gl/gladapt.c /petsc/src/ts/impls/implicit/sundials/sundials.c /petsc/src/ts/impls/implicit/theta/theta.c /petsc/src/ts/impls/pseudo/posindep.c /petsc/src/ts/impls/rosw/rosw.c /petsc/src/ts/interface/ts.c /petsc/src/vec/is/sf/impls/basic/sfbasic.c /petsc/src/vec/is/sf/impls/window/sfwindow.c /petsc/src/vec/pf/impls/constant/const.c /petsc/src/vec/pf/impls/matlab/cmatlab.c /petsc/src/vec/pf/impls/string/cstring.c /petsc/src/vec/pf/pfimpl.h /petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx /petsc/src/vec/vec/impls/seq/seqviennacl/viennaclvecimpl.h /petsc/src/vec/vec/interface/vector.c
22b6d1ca	16-Jan-2015	Barry Smith <bsmith@mcs.anl.gov>	added --with-threadsafety flag other cleanup for threadsafety removed Euclid due to bit rot /petsc/config/PETSc/options/libraryOptions.py /petsc/include/petsc-private/taolinesearchimpl.h /petsc/include/petscvec.h /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/examples/tests/makefile /petsc/src/docs/tex/manual/acknowl.tex /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/docs/website/documentation/linearsolvertable.html /petsc/src/docs/website/miscellaneous/external.html /petsc/src/ksp/ksp/examples/tutorials/makefile /petsc/src/ksp/ksp/impls/lsqr/lsqr.h /petsc/src/ksp/pc/impls/hypre/hypre.c /petsc/src/ksp/pc/impls/ml/ml.c /petsc/src/sys/dll/reg.c pinit.c /petsc/src/sys/threadcomm/interface/threadcomm.c /petsc/src/tao/linesearch/impls/morethuente/morethuente.c /petsc/src/tao/linesearch/interface/taolinesearch.c /petsc/src/tao/pde_constrained/examples/tutorials/elliptic.c /petsc/src/tao/pde_constrained/examples/tutorials/hyperbolic.c /petsc/src/tao/pde_constrained/examples/tutorials/parabolic.c /petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex1.c /petsc/src/ts/examples/tutorials/ex31.c /petsc/src/ts/examples/tutorials/phasefield/biharmonic.c /petsc/src/ts/examples/tutorials/phasefield/biharmonic2.c /petsc/src/ts/examples/tutorials/phasefield/biharmonic3.c /petsc/src/vec/vec/interface/vector.c
1a1499c8	13-Jan-2015	Barry Smith <bsmith@mcs.anl.gov>	updated new XXXSetFromOptions_YYY() methods to take PetscOptionsObjectType /petsc/include/petsc-private/matimpl.h /petsc/include/petsc-private/taoimpl.h /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/impls/network/networkcreate.c /petsc/src/dm/impls/plex/plexcreate.c /petsc/src/ksp/ksp/impls/fcg/fcg.c /petsc/src/ksp/ksp/utils/schurm.c /petsc/src/ksp/pc/impls/gamg/classical.c /petsc/src/ksp/pc/impls/hypre/hypre.c /petsc/src/ksp/pc/impls/kaczmarz/kaczmarz.c /petsc/src/ksp/pc/impls/lsc/lsc.c /petsc/src/mat/color/impls/jp/jp.c /petsc/src/mat/color/interface/matcoloring.c /petsc/src/sys/dll/reg.c aoptions.c /petsc/src/tao/bound/impls/blmvm/blmvm.c /petsc/src/tao/bound/impls/bqpip/bqpip.c /petsc/src/tao/bound/impls/gpcg/gpcg.c /petsc/src/tao/bound/impls/tron/tron.c /petsc/src/tao/bound/utils/isutil.c /petsc/src/tao/complementarity/impls/ssls/ssfls.c /petsc/src/tao/complementarity/impls/ssls/ssls.c /petsc/src/tao/complementarity/impls/ssls/ssls.h /petsc/src/tao/constrained/impls/ipm/ipm.c /petsc/src/tao/interface/fdtest.c /petsc/src/tao/interface/taosolver.c /petsc/src/tao/leastsquares/impls/pounders/pounders.c /petsc/src/tao/linesearch/impls/armijo/armijo.c /petsc/src/tao/linesearch/impls/owarmijo/owarmijo.c /petsc/src/tao/linesearch/impls/unit/unit.c /petsc/src/tao/matrix/lmvmmat.c /petsc/src/tao/pde_constrained/impls/lcl/lcl.c /petsc/src/tao/unconstrained/impls/bmrm/bmrm.c /petsc/src/tao/unconstrained/impls/cg/taocg.c /petsc/src/tao/unconstrained/impls/lmvm/lmvm.c /petsc/src/tao/unconstrained/impls/neldermead/neldermead.c /petsc/src/tao/unconstrained/impls/nls/nls.c /petsc/src/tao/unconstrained/impls/ntl/ntl.c /petsc/src/tao/unconstrained/impls/ntr/ntr.c /petsc/src/tao/unconstrained/impls/owlqn/owlqn.c
83355fc5	09-Nov-2013	Barry Smith <bsmith@mcs.anl.gov>	fixes for merge with HAVE_LOG protection for PETSc object logging /petsc/include/petscoptions.h aoptions.c
e55864a3	08-Nov-2013	Barry Smith <bsmith@mcs.anl.gov>	moved PetscOptionsObject from global variable to local variable in functions /petsc/config/BuildSystem/config/packages/SuiteSparse.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/configure.py /petsc/config/examples/arch-linux-gcc-real-env.py /petsc/config/examples/arch-osx-10.6-cxx-env.py /petsc/include/petsc-private/dmimpl.h /petsc/include/petsc-private/kspimpl.h /petsc/include/petsc-private/linesearchimpl.h /petsc/include/petsc-private/matimpl.h /petsc/include/petsc-private/pcimpl.h /petsc/include/petsc-private/petscfeimpl.h /petsc/include/petsc-private/sfimpl.h /petsc/include/petsc-private/snesimpl.h /petsc/include/petsc-private/tsimpl.h /petsc/include/petsc-private/vecimpl.h /petsc/include/petsc-private/viewerimpl.h /petsc/include/petscoptions.h /petsc/include/petscts.h /petsc/include/petscvec.h /petsc/include/petscviewer.h /petsc/lib/petsc-conf/install.py /petsc/setup.py /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/impls/da/dacreate.c /petsc/src/dm/impls/patch/patchcreate.c /petsc/src/dm/interface/dm.c /petsc/src/docs/tex/manual/acknowl.tex /petsc/src/docs/tex/petsc.bib /petsc/src/docs/tex/petscapp.bib /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/docs/website/documentation/linearsolvertable.html /petsc/src/docs/website/index.html /petsc/src/docs/website/miscellaneous/external.html /petsc/src/ksp/ksp/examples/tests/ex32.c /petsc/src/ksp/ksp/examples/tests/makefile /petsc/src/ksp/ksp/examples/tests/output/ex32_cholmod.out /petsc/src/ksp/ksp/examples/tests/output/ex32_cholmod_sbaij.out /petsc/src/ksp/ksp/impls/bcgs/bcgs.c /petsc/src/ksp/ksp/impls/bcgs/bcgsimpl.h /petsc/src/ksp/ksp/impls/bcgsl/bcgsl.c /petsc/src/ksp/ksp/impls/cg/cg.c /petsc/src/ksp/ksp/impls/cg/cgne/cgne.c /petsc/src/ksp/ksp/impls/cg/gltr/gltr.c /petsc/src/ksp/ksp/impls/cg/nash/nash.c /petsc/src/ksp/ksp/impls/cg/stcg/stcg.c /petsc/src/ksp/ksp/impls/cheby/cheby.c /petsc/src/ksp/ksp/impls/gcr/gcr.c 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fe998a80	13-Jan-2015	Barry Smith <bsmith@mcs.anl.gov>	manual merge of conflict /petsc/bin/configVars.py /petsc/bin/maint/builddist /petsc/bin/maint/buildtest /petsc/bin/maint/generateetags.py /petsc/bin/maint/generatefortranstubs.py /petsc/bin/maint/generators/matlab.py /petsc/bin/maint/toclapack.sh /petsc/bin/maint/xclude /petsc/bin/mpiexec.sshsync /petsc/bin/petsc-mpiexec.uni /petsc/bin/petsc-pythonscripts/PetscBinaryIO.py /petsc/bin/petsc-pythonscripts/PetscBinaryIO_tests.py /petsc/bin/petsc-pythonscripts/petsc_conf.py /petsc/bin/petsc-pythonscripts/petsc_gen_xdmf.py /petsc/bin/petsc-pythonscripts/petsclogformat.py /petsc/bin/petsc-pythonscripts/petscnagupgrade.py /petsc/bin/petscmpiexec /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/Triangle.py /petsc/config/BuildSystem/config/packages/fblaslapack.py /petsc/config/BuildSystem/config/packages/mpi4py.py 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/petsc/src/vec/vec/impls/mpi/mpicusp/makefile /petsc/src/vec/vec/impls/mpi/mpiviennacl/makefile /petsc/src/vec/vec/impls/nest/ftn-custom/makefile /petsc/src/vec/vec/impls/nest/makefile /petsc/src/vec/vec/impls/seq/ftn-custom/makefile /petsc/src/vec/vec/impls/seq/ftn-kernels/makefile /petsc/src/vec/vec/impls/seq/makefile /petsc/src/vec/vec/impls/seq/seqcusp/makefile /petsc/src/vec/vec/impls/seq/seqviennacl/makefile /petsc/src/vec/vec/impls/shared/makefile /petsc/src/vec/vec/interface/f90-custom/makefile /petsc/src/vec/vec/interface/ftn-custom/makefile /petsc/src/vec/vec/interface/makefile /petsc/src/vec/vec/makefile /petsc/src/vec/vec/utils/f90-custom/makefile /petsc/src/vec/vec/utils/ftn-custom/makefile /petsc/src/vec/vec/utils/makefile /petsc/src/vec/vec/utils/matlab/makefile /petsc/src/vec/vec/utils/veccusp/makefile /petsc/tutorials/makefile /petsc/tutorials/python/makefile
8fb42493	31-Dec-2014	Barry Smith <bsmith@mcs.anl.gov>	mv include/finclude to include/petsc-finclude for namespacing in installs /petsc/bin/maint/PetscStaticFunctionCandidates.py /petsc/bin/maint/generatefortranstubs.py /petsc/bin/petscpythonscripts/PetscBinaryIO.py /petsc/bin/petscpythonscripts/PetscBinaryIO_tests.py /petsc/bin/petscpythonscripts/petsc_conf.py /petsc/bin/petscpythonscripts/petsc_gen_xdmf.py /petsc/bin/petscpythonscripts/petsclogformat.py /petsc/bin/petscpythonscripts/petscnagupgrade.py /petsc/bin/portabilitycheck.py /petsc/conf/install.py /petsc/conf/rules /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/BuildSystem/config/packages/hwloc.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/PETSc/Configure.py /petsc/config/builder.py /petsc/config/configure.py /petsc/include/makefile /petsc/include/mpiuni/mpi.h /petsc/include/petsc-finclude/ftn-custom/makefile /petsc/include/petsc-finclude/ftn-custom/petscdm.h90 /petsc/include/petsc-finclude/ftn-custom/petscdmcomposite.h90 /petsc/include/petsc-finclude/ftn-custom/petscdmda.h90 /petsc/include/petsc-finclude/ftn-custom/petscdmdef.h90 /petsc/include/petsc-finclude/ftn-custom/petscdmhide.h90 /petsc/include/petsc-finclude/ftn-custom/petscdmplex.h90 /petsc/include/petsc-finclude/ftn-custom/petscdmplexdef.h90 /petsc/include/petsc-finclude/ftn-custom/petscdmredundant.h90 /petsc/include/petsc-finclude/ftn-custom/petscdmshell.h90 /petsc/include/petsc-finclude/ftn-custom/petscdt.h90 /petsc/include/petsc-finclude/ftn-custom/petscdtdef.h90 /petsc/include/petsc-finclude/ftn-custom/petscdthide.h90 /petsc/include/petsc-finclude/ftn-custom/petscis.h90 /petsc/include/petsc-finclude/ftn-custom/petscisdef.h90 /petsc/include/petsc-finclude/ftn-custom/petscishide.h90 /petsc/include/petsc-finclude/ftn-custom/petscksp.h90 /petsc/include/petsc-finclude/ftn-custom/petsckspdef.h90 /petsc/include/petsc-finclude/ftn-custom/petscksphide.h90 /petsc/include/petsc-finclude/ftn-custom/petscmat.h90 /petsc/include/petsc-finclude/ftn-custom/petscmatdef.h90 /petsc/include/petsc-finclude/ftn-custom/petscmathide.h90 /petsc/include/petsc-finclude/ftn-custom/petscpc.h90 /petsc/include/petsc-finclude/ftn-custom/petscpcdef.h90 /petsc/include/petsc-finclude/ftn-custom/petscpchide.h90 /petsc/include/petsc-finclude/ftn-custom/petscsnes.h90 /petsc/include/petsc-finclude/ftn-custom/petscsnesdef.h90 /petsc/include/petsc-finclude/ftn-custom/petscsneshide.h90 /petsc/include/petsc-finclude/ftn-custom/petscts.h90 /petsc/include/petsc-finclude/ftn-custom/petsctsdef.h90 /petsc/include/petsc-finclude/ftn-custom/petsctshide.h90 /petsc/include/petsc-finclude/ftn-custom/petscvec.h90 /petsc/include/petsc-finclude/ftn-custom/petscvecdef.h90 /petsc/include/petsc-finclude/ftn-custom/petscvechide.h90 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/petsc/include/petsc-finclude/petscdmshell.h90 /petsc/include/petsc-finclude/petscdraw.h /petsc/include/petsc-finclude/petscdrawdef.h /petsc/include/petsc-finclude/petscdt.h90 /petsc/include/petsc-finclude/petscerror.h /petsc/include/petsc-finclude/petscerrordef.h /petsc/include/petsc-finclude/petscis.h /petsc/include/petsc-finclude/petscis.h90 /petsc/include/petsc-finclude/petscisdef.h /petsc/include/petsc-finclude/petscksp.h /petsc/include/petsc-finclude/petscksp.h90 /petsc/include/petsc-finclude/petsckspdef.h /petsc/include/petsc-finclude/petsclog.h /petsc/include/petsc-finclude/petsclogdef.h /petsc/include/petsc-finclude/petscmat.h /petsc/include/petsc-finclude/petscmat.h90 /petsc/include/petsc-finclude/petscmatdef.h /petsc/include/petsc-finclude/petscmatfactorinfosize.h /petsc/include/petsc-finclude/petscmatinfosize.h /petsc/include/petsc-finclude/petscpc.h /petsc/include/petsc-finclude/petscpc.h90 /petsc/include/petsc-finclude/petscpcdef.h /petsc/include/petsc-finclude/petscsnes.h /petsc/include/petsc-finclude/petscsnes.h90 /petsc/include/petsc-finclude/petscsnesdef.h /petsc/include/petsc-finclude/petscsnesfas.h /petsc/include/petsc-finclude/petscsnesfasdef.h /petsc/include/petsc-finclude/petscsys.h /petsc/include/petsc-finclude/petscsysdef.h /petsc/include/petsc-finclude/petsctao.h /petsc/include/petsc-finclude/petsctaodef.h /petsc/include/petsc-finclude/petscts.h /petsc/include/petsc-finclude/petscts.h90 /petsc/include/petsc-finclude/petsctsdef.h /petsc/include/petsc-finclude/petscvec.h /petsc/include/petsc-finclude/petscvec.h90 /petsc/include/petsc-finclude/petscvecdef.h /petsc/include/petsc-finclude/petscviewer.h /petsc/include/petsc-finclude/petscviewer.h90 /petsc/include/petsc-finclude/petscviewerdef.h /petsc/include/petsc-private/fortranimpl.h /petsc/include/petsc-private/matimpl.h /petsc/include/petscerror.h /petsc/include/petscksp.h /petsc/include/petscmat.h /petsc/include/petscpc.h /petsc/include/petscsnes.h /petsc/include/petscsys.h /petsc/include/petsctao.h /petsc/include/petscts.h /petsc/include/petscviewer.h /petsc/makefile /petsc/setup.py /petsc/src/benchmarks/streams/MPIVersion.c /petsc/src/contrib/fun3d/comp/flow.c /petsc/src/contrib/fun3d/comp/ginput.faces /petsc/src/contrib/fun3d/comp/user.F /petsc/src/contrib/fun3d/comp/userJac.F /petsc/src/contrib/fun3d/incomp/user.F /petsc/src/contrib/fun3d/incomp/userJac.F /petsc/src/dm/examples/tutorials/ex11f90.F /petsc/src/dm/f90-mod/makefile /petsc/src/dm/f90-mod/petscdmmod.F /petsc/src/dm/impls/da/dagetarray.c /petsc/src/dm/impls/plex/examples/tests/ex1f90.F /petsc/src/dm/impls/plex/examples/tests/ex2f90.F /petsc/src/dm/impls/plex/examples/tutorials/ex1f90.F /petsc/src/dm/impls/plex/examples/tutorials/ex3f90.F /petsc/src/dm/impls/plex/examples/tutorials/ex4f90.F /petsc/src/dm/impls/plex/plex.c /petsc/src/docs/tex/manual/part1.tex /petsc/src/docs/tex/manual/part2.tex /petsc/src/docs/tex/petsc.bib /petsc/src/docs/tex/petscapp.bib /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/f90-mod/makefile /petsc/src/ksp/f90-mod/petsckspmod.F /petsc/src/ksp/ksp/examples/tests/ex12f.F /petsc/src/ksp/ksp/examples/tests/ex16f.F /petsc/src/ksp/ksp/examples/tests/ex5f.F /petsc/src/ksp/ksp/examples/tests/output/ex11_1.out /petsc/src/ksp/ksp/examples/tests/output/ex11_2.out /petsc/src/ksp/ksp/examples/tutorials/ex11f.F /petsc/src/ksp/ksp/examples/tutorials/ex13f90.F /petsc/src/ksp/ksp/examples/tutorials/ex14f.F /petsc/src/ksp/ksp/examples/tutorials/ex15f.F /petsc/src/ksp/ksp/examples/tutorials/ex1f.F /petsc/src/ksp/ksp/examples/tutorials/ex21f.F /petsc/src/ksp/ksp/examples/tutorials/ex22f.F /petsc/src/ksp/ksp/examples/tutorials/ex2f.F /petsc/src/ksp/ksp/examples/tutorials/ex44f.F90 /petsc/src/ksp/ksp/examples/tutorials/ex45f.F /petsc/src/ksp/ksp/examples/tutorials/ex52f.F /petsc/src/ksp/ksp/examples/tutorials/ex54f.F /petsc/src/ksp/ksp/examples/tutorials/ex57f.F /petsc/src/ksp/ksp/examples/tutorials/ex6f.F /petsc/src/ksp/ksp/interface/itcreate.c /petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/ksp/pc/examples/tests/ex8f.F /petsc/src/mat/examples/tests/ex105f.F /petsc/src/mat/examples/tests/ex120f.F /petsc/src/mat/examples/tests/ex126f.F /petsc/src/mat/examples/tests/ex16f90.F /petsc/src/mat/examples/tests/ex171f.F /petsc/src/mat/examples/tests/ex36f.F /petsc/src/mat/examples/tests/ex58f.F /petsc/src/mat/examples/tests/ex63f.F /petsc/src/mat/examples/tests/ex67f.F /petsc/src/mat/examples/tests/ex79f.F /petsc/src/mat/examples/tests/ex85f.F /petsc/src/mat/f90-mod/makefile /petsc/src/mat/f90-mod/petscmatmod.F /petsc/src/mat/ftn-kernels/sgemv.F /petsc/src/mat/impls/aij/seq/crl/ftn-kernels/fmultcrl.F /petsc/src/mat/impls/aij/seq/ftn-kernels/fmult.F /petsc/src/mat/impls/aij/seq/ftn-kernels/fmultadd.F /petsc/src/mat/impls/aij/seq/ftn-kernels/frelax.F /petsc/src/mat/impls/aij/seq/ftn-kernels/fsolve.F /petsc/src/mat/impls/baij/seq/ftn-kernels/fsolvebaij.F /petsc/src/mat/interface/matrix.c /petsc/src/snes/examples/tests/ex12f.F /petsc/src/snes/examples/tests/ex14f.F /petsc/src/snes/examples/tests/ex1f.F /petsc/src/snes/examples/tutorials/ex12.c /petsc/src/snes/examples/tutorials/ex1f.F /petsc/src/snes/examples/tutorials/ex40f90.F90 /petsc/src/snes/examples/tutorials/ex5f.h /petsc/src/snes/examples/tutorials/ex5f90.F /petsc/src/snes/examples/tutorials/ex5f90t.F /petsc/src/snes/examples/tutorials/ex5fs.F /petsc/src/snes/examples/tutorials/ex62.c /petsc/src/snes/examples/tutorials/ex73f90t.F90 /petsc/src/snes/examples/tutorials/ex74f.F90 /petsc/src/snes/f90-mod/makefile /petsc/src/snes/f90-mod/petscsnesmod.F /petsc/src/snes/impls/vi/vi.c /petsc/src/sys/classes/bag/f2003-src/fsrc/bagenum.F /petsc/src/sys/classes/draw/examples/tests/ex4f.F /petsc/src/sys/classes/draw/examples/tests/ex5f.F /petsc/src/sys/classes/viewer/examples/tutorials/ex1f90.F90 /petsc/src/sys/examples/tests/ex17f.F /petsc/src/sys/examples/tests/ex1f.F /petsc/src/sys/examples/tests/ex5f.F 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/petsc/src/tao/pde_constrained/examples/tutorials/output/elliptic_1.out /petsc/src/tao/pde_constrained/examples/tutorials/output/elliptic_2.out /petsc/src/tao/pde_constrained/examples/tutorials/output/parabolic_1.out /petsc/src/tao/pde_constrained/examples/tutorials/parabolic.c /petsc/src/tao/unconstrained/examples/tutorials/eptorsion2f.h /petsc/src/tao/unconstrained/examples/tutorials/rosenbrock1f.h /petsc/src/ts/examples/tutorials/ex1f.F /petsc/src/ts/examples/tutorials/ex22f.F /petsc/src/ts/examples/tutorials/ex22f_mf.F90 /petsc/src/ts/examples/tutorials/ex2f.F /petsc/src/ts/examples/tutorials/ex2f.h /petsc/src/ts/f90-mod/makefile /petsc/src/ts/f90-mod/petsctsmod.F /petsc/src/ts/impls/rosw/rosw.c /petsc/src/vec/f90-mod/makefile /petsc/src/vec/f90-mod/petscvecmod.F /petsc/src/vec/is/ao/examples/tests/ex4f.F /petsc/src/vec/is/is/examples/tests/ex1f.F /petsc/src/vec/is/is/examples/tests/ex2f.F /petsc/src/vec/is/is/examples/tutorials/ex1f.F 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/petsc/src/vec/vec/impls/seq/ftn-kernels/faypx.F /petsc/src/vec/vec/impls/seq/ftn-kernels/fmaxpy.F /petsc/src/vec/vec/impls/seq/ftn-kernels/fmdot.F /petsc/src/vec/vec/impls/seq/ftn-kernels/fnorm.F /petsc/src/vec/vec/impls/seq/ftn-kernels/fwaxpy.F /petsc/src/vec/vec/impls/seq/ftn-kernels/fxtimesy.F /petsc/src/vec/vec/interface/f90-custom/zvectorf90.c /petsc/tutorials/python/ex1f.F
b7a55fb8	07-Jan-2015	Barry Smith <bsmith@mcs.anl.gov>	missing left hand side of comparison pname.c
47a3fc75	07-Jan-2015	Matthew G. Knepley <knepley@gmail.com>	Viewer: LaTeX viewer should also discard the header pname.c
6c17a5ed	01-Jan-2015	Barry Smith <bsmith@mcs.anl.gov>	added test for PETSC_VIEWER_ASCII_MATRIXMARKET minor formating of code/comments /petsc/src/mat/examples/tests/ex173.c /petsc/src/mat/examples/tests/makefile /petsc/src/mat/examples/tests/output/ex173_1.out /petsc/src/mat/impls/aij/seq/aij.c pname.c
9bc64357	30-Dec-2014	Jonathan Guyer <guyer@nist.gov>	don't print ASCII header information if MatrixMarket format because MatrixMarket does not allow for it /petsc/bin/maint/PetscStaticFunctionCandidates.py /petsc/bin/maint/generatefortranstubs.py /petsc/bin/petscpythonscripts/PetscBinaryIO.py /petsc/bin/petscpythonscripts/PetscBinaryIO_tests.py /petsc/bin/petscpythonscripts/petsc_conf.py /petsc/bin/petscpythonscripts/petsc_gen_xdmf.py /petsc/bin/petscpythonscripts/petsclogformat.py /petsc/bin/petscpythonscripts/petscnagupgrade.py /petsc/conf/install.py /petsc/conf/rules /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/hwloc.py /petsc/config/PETSc/Configure.py /petsc/config/configure.py /petsc/include/finclude/ftn-custom/petscmat.h90 /petsc/include/mpiuni/mpi.h /petsc/src/benchmarks/streams/MPIVersion.c /petsc/src/contrib/fun3d/comp/flow.c /petsc/src/contrib/fun3d/comp/ginput.faces /petsc/src/ksp/ksp/examples/tests/output/ex11_1.out /petsc/src/ksp/ksp/examples/tests/output/ex11_2.out pname.c /petsc/src/ts/impls/rosw/rosw.c
352484c9	26-Dec-2014	Barry Smith <bsmith@mcs.anl.gov>	missing argument to macro /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/mkl_cpardiso.py /petsc/config/configure.py /petsc/config/examples/arch-ms-msvc2012-intelmpi-cudano-nomumps-cpardiso-indexes64-mklilp64-debug.py /petsc/include/petscdmmoab.h /petsc/include/petscmat.h /petsc/include/petscsnes.h /petsc/share/petsc/matlab/PetscBinaryWrite.m /petsc/src/dm/impls/moab/dmmbfield.cxx /petsc/src/dm/impls/moab/dmmbmat.cxx /petsc/src/dm/impls/moab/dmmbvec.cxx /petsc/src/dm/impls/moab/dmmoab.cxx /petsc/src/ksp/ksp/examples/tutorials/ex35.cxx /petsc/src/mat/impls/aij/mpi/makefile /petsc/src/mat/impls/aij/mpi/mkl_cpardiso/makefile /petsc/src/mat/impls/aij/mpi/mkl_cpardiso/mkl_cpardiso.c /petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c /petsc/src/mat/interface/dlregismat.c /petsc/src/snes/interface/snes.c options.c /petsc/src/ts/adapt/interface/tsadapt.c /petsc/src/ts/examples/tutorials/ex35.cxx /petsc/src/ts/impls/implicit/theta/theta.c /petsc/src/ts/interface/ts.c
4653a54d	26-Dec-2014	Barry Smith <bsmith@mcs.anl.gov>	Merge branch 'master' into barry/ksp-converged-reason-viewer Conflicts: src/sys/objects/options.c /petsc/bin/pythonscripts/petsc_conf.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/PTScotch.py /petsc/config/BuildSystem/config/packages/PaStiX.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/SuperLU_MT.py /petsc/config/BuildSystem/config/packages/Zoltan.py /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/BuildSystem/config/packages/metis.py /petsc/config/BuildSystem/config/packages/parmetis.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/Regression.py /petsc/config/PETSc/options/indexTypes.py /petsc/config/PETSc/options/libraryOptions.py /petsc/config/builder.py /petsc/config/cmakeboot.py /petsc/include/petsc-private/dmdaimpl.h /petsc/include/petsc-private/dmpleximpl.h /petsc/include/petsc-private/isimpl.h /petsc/include/petsc-private/petscfeimpl.h /petsc/include/petscdmda.h /petsc/include/petscdmplex.h /petsc/include/petscfv.h /petsc/include/petscfvtypes.h /petsc/include/petscis.h /petsc/include/petscistypes.h /petsc/include/petscksp.h /petsc/include/petscsnes.h /petsc/include/petscviewerhdf5.h /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/impls/composite/pack.c /petsc/src/dm/impls/da/da1.c /petsc/src/dm/impls/da/da2.c /petsc/src/dm/impls/da/dacreate.c /petsc/src/dm/impls/da/dadestroy.c /petsc/src/dm/impls/da/daindex.c /petsc/src/dm/impls/da/fdda.c /petsc/src/dm/impls/da/gr2.c /petsc/src/dm/impls/plex/examples/tests/ex1.c /petsc/src/dm/impls/plex/examples/tests/ex12.c /petsc/src/dm/impls/plex/examples/tests/output/ex12_1.out /petsc/src/dm/impls/plex/examples/tests/output/ex12_2.out /petsc/src/dm/impls/plex/examples/tests/output/ex12_3.out /petsc/src/dm/impls/plex/examples/tests/output/ex12_4.out /petsc/src/dm/impls/plex/examples/tests/output/ex12_5.out /petsc/src/dm/impls/plex/examples/tests/output/ex12_6.out /petsc/src/dm/impls/plex/examples/tests/output/ex12_7.out /petsc/src/dm/impls/plex/examples/tests/output/ex1_13.out /petsc/src/dm/impls/plex/examples/tests/output/ex1_14.out /petsc/src/dm/impls/plex/examples/tests/output/ex1_17.out /petsc/src/dm/impls/plex/examples/tests/output/ex1_18.out /petsc/src/dm/impls/plex/examples/tests/output/ex1_2.out /petsc/src/dm/impls/plex/examples/tests/output/ex1_5.out /petsc/src/dm/impls/plex/examples/tests/output/ex1_9.out /petsc/src/dm/impls/plex/examples/tests/output/ex5_8.out /petsc/src/dm/impls/plex/examples/tests/output/ex5_9.out /petsc/src/dm/impls/plex/ftn-custom/makefile /petsc/src/dm/impls/plex/ftn-custom/zplexcreate.c /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/plex/plexdistribute.c /petsc/src/dm/impls/plex/plexgenerate.c /petsc/src/dm/impls/plex/plexhdf5.c /petsc/src/dm/impls/plex/plexlabel.c /petsc/src/dm/impls/plex/plexpartition.c /petsc/src/dm/impls/plex/plexrefine.c /petsc/src/dm/impls/redundant/dmredundant.c /petsc/src/dm/impls/shell/dmshell.c /petsc/src/docs/tex/manual/part2.tex /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/docs/website/index.html /petsc/src/ksp/ksp/examples/tests/ex45.c /petsc/src/ksp/ksp/examples/tests/ex8.c /petsc/src/ksp/ksp/examples/tests/makefile /petsc/src/ksp/ksp/examples/tests/output/ex45_1.out /petsc/src/ksp/ksp/examples/tutorials/ex43.c /petsc/src/ksp/ksp/examples/tutorials/ex49.c /petsc/src/ksp/ksp/examples/tutorials/ex54.c /petsc/src/ksp/ksp/examples/tutorials/ex59.c /petsc/src/ksp/ksp/examples/tutorials/makefile /petsc/src/ksp/ksp/examples/tutorials/output/ex43_3.out /petsc/src/ksp/ksp/examples/tutorials/output/ex43_bjacobi.out /petsc/src/ksp/ksp/examples/tutorials/output/ex43_nested_gmg.out /petsc/src/ksp/ksp/examples/tutorials/output/ex49_4.out /petsc/src/ksp/ksp/examples/tutorials/output/ex49_5.out /petsc/src/ksp/ksp/impls/fcg/fcg.c /petsc/src/ksp/ksp/impls/gmres/gmres.c /petsc/src/ksp/ksp/impls/rich/rich.c /petsc/src/ksp/ksp/impls/specest/specest.c /petsc/src/ksp/ksp/interface/ftn-custom/zitfuncf.c /petsc/src/ksp/ksp/interface/ftn-custom/zxonf.c /petsc/src/ksp/ksp/interface/iguess.c /petsc/src/ksp/ksp/interface/itcl.c /petsc/src/ksp/ksp/interface/iterativ.c /petsc/src/ksp/ksp/interface/xmon.c /petsc/src/ksp/pc/impls/factor/ilu/ilu.c /petsc/src/ksp/pc/impls/gamg/gamg.c /petsc/src/ksp/pc/impls/gamg/tools.c /petsc/src/ksp/pc/impls/ml/ml.c /petsc/src/ksp/pc/impls/tfs/gs.c /petsc/src/ksp/pc/interface/precon.c /petsc/src/mat/color/impls/greedy/greedy.c /petsc/src/mat/color/impls/jp/jp.c /petsc/src/mat/color/impls/minpack/color.c /petsc/src/mat/color/impls/natural/natural.c /petsc/src/mat/examples/tests/ex172.c /petsc/src/mat/examples/tests/ex99.c /petsc/src/mat/examples/tests/makefile /petsc/src/mat/examples/tests/output/ex171_1.out /petsc/src/mat/examples/tests/output/ex180_1.out /petsc/src/mat/impls/aij/mpi/fdmpiaij.c /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/aijfact.c /petsc/src/mat/impls/aij/seq/fdaij.c /petsc/src/mat/impls/aij/seq/inode.c /petsc/src/mat/impls/aij/seq/matmatmult.c /petsc/src/mat/impls/baij/mpi/mpibaij.c /petsc/src/mat/impls/baij/seq/baij.c /petsc/src/mat/impls/baij/seq/baijfact2.c /petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c /petsc/src/mat/impls/sbaij/seq/sbaij.c /petsc/src/mat/interface/matrix.c /petsc/src/mat/matfd/fdmatrix.c /petsc/src/snes/examples/tutorials/makefile /petsc/src/snes/impls/vi/rs/virs.c /petsc/src/snes/interface/ftn-custom/zsnesf.c /petsc/src/snes/interface/snes.c /petsc/src/snes/interface/snesut.c /petsc/src/snes/utils/dmplexsnes.c /petsc/src/snes/utils/f90-custom/makefile /petsc/src/snes/utils/f90-custom/zdmplexsnesf90.c /petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c /petsc/src/sys/classes/viewer/impls/socket/send.c /petsc/src/sys/classes/viewer/impls/vtk/vtkv.c options.c /petsc/src/tao/bound/impls/tron/tron.c /petsc/src/tao/interface/taosolver.c /petsc/src/tao/interface/taosolver_fg.c /petsc/src/tao/leastsquares/impls/pounders/pounders.c /petsc/src/tao/pde_constrained/impls/lcl/lcl.c /petsc/src/ts/impls/eimex/eimex.c /petsc/src/vec/is/is/impls/general/general.c /petsc/src/vec/is/is/utils/ftn-custom/ziscoloringf.c /petsc/src/vec/is/is/utils/iscoloring.c /petsc/src/vec/is/sf/impls/window/sfwindow.c /petsc/src/vec/is/utils/isio.c /petsc/src/vec/is/utils/vsectionis.c /petsc/src/vec/vec/impls/mpi/pdvec.c /petsc/src/vec/vec/interface/vector.c /petsc/src/vec/vec/utils/vecio.c
2a359c20	19-Dec-2014	Barry Smith <bsmith@mcs.anl.gov>	Changing -snes_converged_reason and -ksp_converged_reason to take a general viewer argument /petsc/config/BuildSystem/config/packages/SuiteSparse.py /petsc/include/petsc-private/kspimpl.h /petsc/include/petsc-private/snesimpl.h /petsc/include/petscksp.h /petsc/include/petscsnes.h /petsc/include/petscsys.h /petsc/src/dm/dt/interface/dtfe.c /petsc/src/ksp/ksp/impls/fcg/fcg.c /petsc/src/ksp/ksp/interface/itcl.c /petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/snes/interface/snes.c /petsc/src/sys/classes/viewer/interface/viewreg.c options.c
76d63ea5	19-Dec-2014	Barry Smith <bsmith@mcs.anl.gov>	Allow PetscObjectViewFromOptions() to be called again even if previously it generated an error for use from Python Removed a couple of unneeded incall static checks from XXXViewFromOptions() routines /petsc/config/BuildSystem/config/packages/SuiteSparse.py /petsc/src/dm/dt/interface/dtfe.c options.c /petsc/src/vec/is/is/utils/iscoloring.c /petsc/src/vec/vec/interface/vector.c
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