History log of /petsc/src/sys/objects/ (Results 1876 – 1900 of 2473)
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54f4f4c119-Dec-2011 Shri Abhyankar <abhyshr@mcs.anl.gov>

Changed the option name '-thread_max' to '-nthreads'

Hg-commit: bad80da64b2c62f240e77e3801303be042add092


/petsc/bin/maint/generateetags.py
/petsc/bin/matlab/PetscBinaryRead.m
/petsc/config/PETSc/packages/hwloc.py
/petsc/include/petscbg.h
/petsc/include/petscctable.h
/petsc/include/petscpc.h
/petsc/include/private/bgimpl.h
/petsc/include/private/dmimpl.h
/petsc/include/private/matimpl.h
/petsc/include/sieve/Mesh.hh
/petsc/include/sieve/Overlap.hh
/petsc/include/sieve/Partitioner.hh
/petsc/src/benchmarks/streams/OpenMPVersion.c
/petsc/src/benchmarks/streams/PthreadVersion.c
/petsc/src/benchmarks/streams/makefile
/petsc/src/dm/impls/adda/adda.c
/petsc/src/dm/impls/cartesian/cartesian.c
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/da/da.c
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/iga/igacreate.c
/petsc/src/dm/impls/mesh/examples/tests/ex2.c
/petsc/src/dm/impls/mesh/examples/tests/ex3.c
/petsc/src/dm/impls/mesh/meshcreate.c
/petsc/src/dm/impls/redundant/dmredundant.c
/petsc/src/dm/impls/sliced/sliced.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/download/petsc-patches.html
/petsc/src/docs/website/index.html
/petsc/src/ksp/ksp/examples/tests/ex27.c
/petsc/src/ksp/ksp/examples/tests/ex33.c
/petsc/src/ksp/ksp/examples/tests/ex36.c
/petsc/src/ksp/ksp/examples/tutorials/ex40.c
/petsc/src/ksp/ksp/examples/tutorials/ex52.c
/petsc/src/ksp/ksp/examples/tutorials/ex56.c
/petsc/src/ksp/pc/examples/tutorials/ex1.c
/petsc/src/ksp/pc/examples/tutorials/ex2.c
/petsc/src/ksp/pc/impls/bjacobi/bjacobi.c
/petsc/src/ksp/pc/impls/gamg/createProlongation.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/gamg.h
/petsc/src/ksp/pc/interface/pcset.c
/petsc/src/mat/examples/tests/ex73.c
/petsc/src/mat/impls/aij/mpi/mmaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.h
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/aij/mpi/mpiov.c
/petsc/src/mat/impls/aij/mpi/mpiptap.c
/petsc/src/mat/impls/aij/mpi/pastix/pastix.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/baij/mpi/baijov.c
/petsc/src/mat/impls/baij/mpi/mmbaij.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/fft/fftw/fftw.c
/petsc/src/mat/impls/sbaij/mpi/mmsbaij.c
/petsc/src/mat/impls/shell/shell.c
/petsc/src/snes/examples/tutorials/ex22.c
/petsc/src/snes/examples/tutorials/ex48.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/ngmres/snesngmres.h
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/impls/richardson/snesrichardson.c
/petsc/src/snes/impls/vi/rs/virs.c
/petsc/src/snes/impls/vi/rsaug/virsaug.c
/petsc/src/snes/interface/snesls.c
/petsc/src/sys/dll/makefile
pthread/pthread.c
/petsc/src/sys/utils/ctable.c
/petsc/src/sys/utils/sorti.c
/petsc/src/vec/bg/bg.c
/petsc/src/vec/bg/examples/makefile
/petsc/src/vec/bg/examples/tutorials/ex1.c
/petsc/src/vec/bg/examples/tutorials/makefile
/petsc/src/vec/bg/examples/tutorials/output/ex1_1.out
/petsc/src/vec/bg/examples/tutorials/output/ex1_2.out
/petsc/src/vec/bg/makefile
/petsc/src/vec/is/utils/isblock.c
/petsc/src/vec/vec/impls/mpi/mpicusp/mpicusp.cu
/petsc/src/vec/vec/impls/mpi/mpipthread/makefile
/petsc/src/vec/vec/impls/seq/seqpthread/vecpthread.c
/petsc/src/vec/vec/impls/seq/seqpthread/vecpthreadimpl.h
/petsc/src/vec/vec/impls/seq/vsection.c
/petsc/src/vec/vec/interface/dlregisvec.c
/petsc/src/vec/vec/interface/vector.c
7f25699414-Dec-2011 Shri Abhyankar <abhyshr@mcs.anl.gov>

Fixed a bug in setting the core affinity for each thread.

Hg-commit: a8445690ceef0b262f7d8f9993a9958487084b84


/petsc/config/PETSc/packages/bg.py
/petsc/include/petscbg.h
/petsc/include/private/bgimpl.h
/petsc/include/private/matimpl.h
/petsc/src/dm/impls/mesh/examples/tests/ex2.c
/petsc/src/mat/impls/aij/mpi/pastix/pastix.c
/petsc/src/mat/partition/impls/pmetis/pmetis.c
/petsc/src/snes/examples/tutorials/makefile
pthread/lockfree.c
/petsc/src/ts/examples/tutorials/ex22f.F
/petsc/src/ts/examples/tutorials/ex22f_mf.F90
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/vec/bg/bg.c
/petsc/src/vec/bg/dlregisbg.c
/petsc/src/vec/bg/makefile
/petsc/src/vec/makefile
/petsc/src/vec/vec/impls/seq/seqpthread/vecpthread.c
9d7cba9212-Dec-2011 Shri Abhyankar <abhyshr@mcs.anl.gov>

Optimization for VecNorm_SeqPThread()..use BLASdot_ instead of BLASnrm2_

Hg-commit: 03ebd8fd8c65680d1855bc0a735fb1c37a321946


/petsc/include/private/matimpl.h
/petsc/src/mat/impls/aij/seq/matmatmult.c
pthread/pthread.c
pthread/pthreadpool_true.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/impls/seq/seqpthread/vecpthread.c
0b94310712-Dec-2011 Shri Abhyankar <abhyshr@mcs.anl.gov>

Fixed extern declarations which made C++ compiler angry.

Hg-commit: 4c62473ca1afcb55127540e8f5674035f43ad022


/petsc/include/sieve/Overlap.hh
/petsc/src/dm/impls/mesh/examples/tests/ex2.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex5_5_fas.out
/petsc/src/snes/examples/tutorials/output/ex5_5_fas_additive.out
/petsc/src/snes/examples/tutorials/output/ex5_5_ngmres_fas.out
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/ncg/snesncg.c
pthread/lockfree.c
pthread/pthreadpool_chain.c
pthread/pthreadpool_main.c
pthread/pthreadpool_tree.c
pthread/pthreadpool_true.c
4f500abc12-Dec-2011 Shri Abhyankar <abhyshr@mcs.anl.gov>

Fixed undefined symbol and trivial clean up.

Hg-commit: f35aedb871b77d1c081b4ea85589d86ed030263e


/petsc/config/install.py
/petsc/include/sieve/Mesh.hh
/petsc/src/snes/examples/tutorials/output/ex57_0.out
pthread/lockfree.c
/petsc/src/vec/vec/impls/seq/seqpthread/vecpthread.c
8b4f696912-Dec-2011 Shri Abhyankar <abhyshr@mcs.anl.gov>

Made the main thread to share work equally with other threads. Thus, the main thread no longer is idle while the other threads are doing the work. This is the default option currently, added a run-ti

Made the main thread to share work equally with other threads. Thus, the main thread no longer is idle while the other threads are doing the work. This is the default option currently, added a run-time option to turn it off. Only the lock-free algorithm works with this currently, need to add code for thread pools.

Hg-commit: 81ffb28930df4fcadfb8365d7bcc8bf19e0e36a1

show more ...


pthread/lockfree.c
pthread/pthread.c
/petsc/src/vec/vec/impls/seq/seqpthread/vecpthread.c
ea88ca0511-Dec-2011 Shri Abhyankar <abhyshr@mcs.anl.gov>

Removed unneeded variable.

Hg-commit: 99832f5fd60fa9afe567946c7f95d741dbb48645


/petsc/include/private/matimpl.h
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tutorials/ex1.c
/petsc/src/snes/examples/tutorials/ex12.c
/petsc/src/snes/examples/tutorials/ex20.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex20_1.out
pthread/lockfree.c
/petsc/src/ts/examples/tutorials/phasefield/biharmonic2.c
/petsc/src/vec/is/utils/iscoloring.c
7a77fe6610-Dec-2011 Shri Abhyankar <abhyshr@mcs.anl.gov>

The main thread should not memzero the entire array for vectors but rather have each thread memzero its part of the array.
Changed flag name PetscUseThreadPool to PetscCheckCoreAffinity.
Cleaned up e

The main thread should not memzero the entire array for vectors but rather have each thread memzero its part of the array.
Changed flag name PetscUseThreadPool to PetscCheckCoreAffinity.
Cleaned up ex1.

Hg-commit: e606ff4dd228e34d586faa1d4aba96ce1c8af728

show more ...


/petsc/bin/pythonscripts/PetscGenerateFEMQuadratureTensorProduct.py
/petsc/config/PETSc/FEM.py
/petsc/config/builder.py
/petsc/src/snes/examples/tutorials/ex57.c
/petsc/src/snes/examples/tutorials/output/ex57_0.out
pthread/pthread.c
/petsc/src/vec/vec/examples/tutorials/ex1.c
/petsc/src/vec/vec/impls/seq/seqpthread/vecpthread.c
9d53011710-Dec-2011 Shri Abhyankar <abhyshr@mcs.anl.gov>

Threads need to reset their status when they exit the spin loop.

Hg-commit: 75b0a81831f9a8dea4a88efaa20a86f8af0d9f82


/petsc/config/PETSc/packages/cmake.py
/petsc/src/mat/impls/aij/seq/aij.c
pthread/lockfree.c
171dfee309-Dec-2011 Shri Abhyankar <abhyshr@mcs.anl.gov>

Added non-blocking thread synchronization algorithm

Hg-commit: 269b107b493a7b9dccf286d39b55bb50c6307aa8


/petsc/.hgignore
/petsc/config/PETSc/FEM.py
/petsc/config/PETSc/packages/MUMPS.py
/petsc/config/PETSc/packages/X11.py
/petsc/config/PETSc/packages/cmake.py
/petsc/config/PETSc/packages/cuda.py
/petsc/config/PETSc/packages/metis.py
/petsc/config/PETSc/packages/parmetis.py
/petsc/config/builder.py
/petsc/config/builder2.py
/petsc/config/cmakeboot.py
/petsc/config/examples/arch-bgp-ibm-opt.py
/petsc/config/examples/arch-cray-xt6-pkgs-opt.py
/petsc/config/examples/arch-freebsd-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-freebsd-cxx-pkgs-opt.py
/petsc/config/examples/arch-freebsd-pkgs-opt.py
/petsc/config/examples/arch-linux-gcc-absoft.py
/petsc/config/examples/arch-linux-pkgs-cxx-mlib.py
/petsc/config/examples/arch-linux-pkgs-dbg-ftn-interfaces.py
/petsc/config/examples/arch-linux-pkgs-gcov.py
/petsc/config/examples/arch-linux-pkgs-opt.py
/petsc/config/examples/arch-linux-pkgs-valgrind.py
/petsc/config/examples/arch-opensolaris-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-opensolaris-cxx-pkgs-opt.py
/petsc/config/examples/arch-opensolaris-pkgs-opt.py
/petsc/config/examples/arch-osx-10.6-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-osx-10.6-cxx-pkgs-opt.py
/petsc/include/finclude/petscdm.h
/petsc/include/finclude/petsckspdef.h
/petsc/include/finclude/petscpcdef.h
/petsc/include/finclude/petscvecdef.h
/petsc/include/finclude/petscviewer.h
/petsc/include/petscdmda.h
/petsc/include/petscdmmesh.h
/petsc/include/petscksp.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/include/petscsnesfas.h
/petsc/include/private/matimpl.h
/petsc/include/private/snesimpl.h
/petsc/include/private/vecimpl.h
/petsc/src/benchmarks/streams/BasicVersion.c
/petsc/src/benchmarks/streams/OpenMPVersion.c
/petsc/src/dm/impls/mesh/examples/tutorials/ex2f.F
/petsc/src/dm/impls/mesh/examples/tutorials/makefile
/petsc/src/dm/impls/mesh/mesh.c
/petsc/src/dm/impls/mesh/meshcreate.c
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/index.html
/petsc/src/ksp/ksp/examples/tutorials/ex10.c
/petsc/src/ksp/ksp/examples/tutorials/ex52.c
/petsc/src/ksp/ksp/examples/tutorials/ex57f.F
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/interface/iterativ.c
/petsc/src/ksp/pc/impls/gamg/createProlongation.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/gamg.h
/petsc/src/ksp/pc/impls/gamg/makefile
/petsc/src/ksp/pc/impls/pbjacobi/pbjacobi.c
/petsc/src/ksp/pc/impls/supportgraph/supportgraph.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.h
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/aij/mpi/mpiptap.c
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/utils/freespace.c
/petsc/src/snes/examples/tutorials/ex1.c
/petsc/src/snes/examples/tutorials/ex5.c
/petsc/src/snes/examples/tutorials/ex50.c
/petsc/src/snes/examples/tutorials/ex56.c
/petsc/src/snes/examples/tutorials/ex57.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex57_0.out
/petsc/src/snes/examples/tutorials/output/ex5_5_fas.out
/petsc/src/snes/examples/tutorials/output/ex5_5_fas_additive.out
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/fas/fasgalerkin.c
/petsc/src/snes/impls/fas/fasimpls.h
/petsc/src/snes/impls/fas/makefile
/petsc/src/snes/impls/qn/qn.c
/petsc/src/snes/interface/dlregissnes.c
/petsc/src/snes/interface/snes.c
/petsc/src/sys/dll/reg.c
pthread/lockfree.c
pthread/makefile
pthread/pthread.c
/petsc/src/sys/viewer/impls/vtk/vtkv.c
/petsc/src/ts/examples/tutorials/ex22.c
/petsc/src/ts/impls/arkimex/arkimex.c
/petsc/src/vec/vec/impls/seq/vsection.c
8dc070cc30-Nov-2011 Shri Abhyankar <abhyshr@mcs.anl.gov>

Fix unused variable warning

Hg-commit: 6499b27be1c63ee60e8a6bcd16bc0cb91bdfeb54


pthread/pthreadpool_chain.c
pthread/pthreadpool_tree.c
pthread/pthreadpool_true.c
81b3281430-Nov-2011 Shri Abhyankar <abhyshr@mcs.anl.gov>

Undefined variable

Hg-commit: 446bcdf2810bf61198ba6259ca8fce09d249ccd5


pthread/pthreadpool_true.c
5c5fd5e430-Nov-2011 Shri Abhyankar <abhyshr@mcs.anl.gov>

Created separate file for each thread pool class

Hg-commit: af7c7604ef714d179ac5c1d972e24269da232609


/petsc/config/PETSc/packages/Prometheus.py
/petsc/src/benchmarks/benchmarkExample.py
/petsc/src/dm/impls/da/gr2.c
makefile
pthread/makefile
pthread/pthread.c
pthread/pthreadpool_chain.c
pthread/pthreadpool_main.c
pthread/pthreadpool_tree.c
pthread/pthreadpool_true.c
/petsc/src/vec/vec/impls/mpi/pdvec.c
2298edce30-Nov-2011 Shri Abhyankar <abhyshr@mcs.anl.gov>

Moved the pthread stuff to a seperate directory

Hg-commit: 4c5b55fda84e883ac388d4316acab479672e3246


/petsc/config/PETSc/packages/Prometheus.py
/petsc/include/finclude/petsctsdef.h
/petsc/include/petscts.h
/petsc/include/sieve/Mesh.hh
/petsc/src/mat/impls/aij/mpi/mpiaij.h
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/aij/mpi/mpiptap.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/interface/matrix.c
makefile
pthread/makefile
pthread/pthread.c
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/vec/vec/impls/seq/seqpthread/vecpthread.c
65a57a3229-Nov-2011 Sean Farley <sean@mcs.anl.gov>

Removed unused variable in mpimatmatmult.c

Hg-commit: 9aa5ecf806ef2d461ce826f9f118929ec583a532


/petsc/config/builder2.py
/petsc/config/configure.py
/petsc/include/petscdmmesh.h
/petsc/include/petscsys.hh
/petsc/include/private/meshimpl.h
/petsc/src/benchmarks/benchmarkExample.py
/petsc/src/dm/impls/mesh/mesh.c
/petsc/src/dm/impls/mesh/meshcreate.c
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/developers/index.html
/petsc/src/docs/website/documentation/ams.html
/petsc/src/docs/website/documentation/bugreporting.html
/petsc/src/docs/website/documentation/codemanagement.html
/petsc/src/docs/website/documentation/installation.html
/petsc/src/docs/website/documentation/referencing.html
/petsc/src/docs/website/documentation/tutorials/index.html
/petsc/src/docs/website/features/gpus.html
/petsc/src/docs/website/features/threads.html
/petsc/src/docs/website/images/peter.jpg
/petsc/src/docs/website/miscellaneous/acknwldg.html
/petsc/src/docs/website/miscellaneous/external.html
/petsc/src/docs/website/miscellaneous/funding.html
/petsc/src/docs/website/miscellaneous/index.html
/petsc/src/docs/website/miscellaneous/petscthreads.html
/petsc/src/docs/website/publications/index.html
/petsc/src/ksp/pc/impls/gamg/createProlongation.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/gamg.h
/petsc/src/ksp/pc/interface/pcregis.c
/petsc/src/mat/examples/tests/ex1.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.h
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/aij/mpi/mpiptap.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/partition/impls/pmetis/pmetis.c
/petsc/src/snes/examples/tutorials/ex12.c
/petsc/src/snes/examples/tutorials/ex52.c
/petsc/src/snes/examples/tutorials/ex52_integrateElement.cu
/petsc/src/snes/examples/tutorials/ex56.c
options.c
/petsc/src/ts/impls/rosw/rosw.c
093de6ef27-Nov-2011 Barry Smith <bsmith@mcs.anl.gov>

when parsing command line arguments ignore non-key arguments like -1 from being listed in the database

Hg-commit: 96583a3e163082b5b88d7dbe1255da0b9806788a


/petsc/bin/maint/builddist
/petsc/bin/pythonscripts/PetscBinaryIO.py
/petsc/conf/test
/petsc/config/PETSc/packages/MUMPS.py
/petsc/config/examples/arch-bgp-ibm-opt.py
/petsc/config/examples/arch-cray-xt6-pkgs-opt.py
/petsc/config/examples/arch-freebsd-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-freebsd-cxx-pkgs-opt.py
/petsc/config/examples/arch-freebsd-pkgs-opt.py
/petsc/config/examples/arch-linux-gcc-absoft.py
/petsc/config/examples/arch-linux-pkgs-cxx-mlib.py
/petsc/config/examples/arch-linux-pkgs-dbg-ftn-interfaces.py
/petsc/config/examples/arch-linux-pkgs-gcov.py
/petsc/config/examples/arch-linux-pkgs-opt.py
/petsc/config/examples/arch-linux-pkgs-valgrind.py
/petsc/config/examples/arch-opensolaris-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-opensolaris-cxx-pkgs-opt.py
/petsc/config/examples/arch-opensolaris-pkgs-opt.py
/petsc/config/examples/arch-osx-10.6-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-osx-10.6-cxx-pkgs-opt.py
/petsc/include/petscts.h
/petsc/include/petscvec.h
/petsc/src/dm/impls/mesh/examples/tests/ex1.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/manual/part2.tex
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/petsc/src/ksp/pc/impls/gamg/gamg.c
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/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/impls/scatter/mscatter.c
/petsc/src/snes/examples/tutorials/ex52.c
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/petsc/src/snes/examples/tutorials/output/ex52_8.out
/petsc/src/snes/examples/tutorials/output/ex52_9.out
/petsc/src/snes/interface/snes.c
/petsc/src/sys/error/fp.c
/petsc/src/sys/mpiuni/mpi.c
options.c
/petsc/src/ts/impls/arkimex/arkimex.c
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/vec/vec/impls/mpi/mpipthread/mpivecpthread.c
/petsc/src/vec/vec/impls/seq/seqpthread/vecpthread.c
/petsc/src/vec/vec/utils/vpscat.h
171400e922-Nov-2011 Barry Smith <bsmith@mcs.anl.gov>

added checking for correct dm argument to many dm functions

Hg-commit: efbaaf76be6a47a00a3d2a028b53df9c06feb13d


/petsc/config/PETSc/packages/metis.py
/petsc/config/PETSc/packages/parmetis.py
/petsc/config/cmakeboot.py
/petsc/include/private/dmimpl.h
/petsc/src/contrib/fun3d/incomp/flow.c
/petsc/src/contrib/fun3d/incomp/user.h
/petsc/src/dm/interface/dm.c
/petsc/src/docs/website/documentation/faq.html
/petsc/src/ksp/pc/impls/gamg/createProlongation.c
/petsc/src/mat/impls/aij/mpi/mpiptap.c
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tutorials/ex18.c
/petsc/src/snes/examples/tutorials/ex7.c
/petsc/src/snes/examples/tutorials/ex8.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex18_1.out
/petsc/src/snes/interface/snes.c
aoptions.c
/petsc/src/sys/viewer/impls/binary/binv.c
/petsc/src/vec/vec/utils/vpscat.h
6a49a88519-Nov-2011 Jed Brown <jed@59A2.org>

Fix stray #ifdef PETSC_HAVE_VALGRIND left behind by last patch

Hg-commit: 0641b4f299b1cdbef0549ab2470327470b141f76


init.c
dc92acba19-Nov-2011 Jed Brown <jed@59A2.org>

Add -malloc_test. This option is for developers to have alway on to check debugging builds, but not optimized builds

Hg-commit: e3176614f9c226b6890d04f029928b0d5fd8ac81


/petsc/bin/maint/mapnameslatex.py
/petsc/bin/maint/update-docs.py
/petsc/bin/petscnagupgrade.py
/petsc/config/PETSc/packages/MUMPS.py
/petsc/config/PETSc/packages/PTScotch.py
/petsc/config/PETSc/packages/Prometheus.py
/petsc/config/PETSc/packages/SuperLU_DIST.py
/petsc/config/PETSc/packages/Zoltan.py
/petsc/config/PETSc/packages/metis.py
/petsc/config/PETSc/packages/parmetis.py
/petsc/config/PETSc/utilities/CMake.py
/petsc/config/PETSc/utilities/__init__.py
/petsc/include/petscmat.h
/petsc/include/petscsys.h
/petsc/include/sieve/Overlap.hh
/petsc/include/sieve/Partitioner.hh
/petsc/makefile
/petsc/src/dm/impls/mesh/meshlagrit.c
/petsc/src/dm/impls/mesh/meshpcice.c
/petsc/src/docs/tex/manual/developers.tex
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/website/developers/index.html
/petsc/src/docs/website/developers/projects.html
/petsc/src/docs/website/documentation/bugreporting.html
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/petsc/src/docs/website/documentation/exercises/compiling/index.html
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/petsc/src/docs/website/documentation/exercises/index.html
/petsc/src/docs/website/documentation/exercises/ksp/index.html
/petsc/src/docs/website/documentation/exercises/matrices/index.html
/petsc/src/docs/website/documentation/exercises/odes/index.html
/petsc/src/docs/website/documentation/exercises/pseudo/index.html
/petsc/src/docs/website/documentation/exercises/simpleoutput/index.html
/petsc/src/docs/website/documentation/exercises/snes/index.html
/petsc/src/docs/website/documentation/exercises/vectors/index.html
/petsc/src/docs/website/documentation/faq.html
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/petsc/src/docs/website/documentation/linearsolvertable.html
/petsc/src/docs/website/features/gpus.html
/petsc/src/docs/website/features/threads.html
/petsc/src/ksp/ksp/examples/tutorials/ex28.c
/petsc/src/ksp/ksp/examples/tutorials/ex31.c
/petsc/src/ksp/ksp/examples/tutorials/ex34.c
/petsc/src/ksp/ksp/examples/tutorials/ex50.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex50.out
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.h
/petsc/src/mat/impls/aij/mpi/mpiptap.c
/petsc/src/mat/partition/impls/pmetis/pmetis.c
/petsc/src/snes/examples/tutorials/ex21.c
/petsc/src/snes/examples/tutorials/ex4.c
/petsc/src/snes/examples/tutorials/ex40f90.F
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex28_0.out
/petsc/src/snes/examples/tutorials/output/ex28_2.out
/petsc/src/snes/examples/tutorials/output/ex28_3.out
/petsc/src/snes/examples/tutorials/output/ex40f90.out
/petsc/src/snes/examples/tutorials/output/ex4_1.out
/petsc/src/snes/interface/ftn-custom/zsnesf.c
/petsc/src/snes/interface/snes.c
/petsc/src/sys/memory/mtr.c
init.c
pinit.c
d9a2069218-Nov-2011 Satish Balay <balay@mcs.anl.gov>

merge from 32

Hg-commit: 92b8d3126bca9766c54910a381a2753fce3ad6e3


/petsc/bin/maint/confignightly/32/xbox
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/petsc/bin/maint/mapnameslatex.py
/petsc/bin/maint/rebuildtar
/petsc/bin/maint/update-docs.py
/petsc/bin/petscnagupgrade.py
/petsc/conf/rules
/petsc/config/PETSc/utilities/scalarTypes.py
/petsc/config/builder.py
/petsc/config/configure.py
/petsc/include/finclude/ftn-custom/makefile
/petsc/include/finclude/petscmat.h
/petsc/include/finclude/petsctsdef.h
/petsc/include/petscbag.h
/petsc/include/petscsnes.h
/petsc/include/private/snesimpl.h
/petsc/makefile
/petsc/src/dm/impls/da/da1.c
/petsc/src/dm/impls/da/fdda.c
/petsc/src/dm/impls/iga/iga.c
/petsc/src/dm/impls/mesh/examples/tests/ex1.c
/petsc/src/dm/impls/mesh/mesh.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/manual/abstract.tex
/petsc/src/docs/tex/manual/developers.tex
/petsc/src/docs/tex/manual/gettinginfo.tex
/petsc/src/docs/tex/manual/part1.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/website/developers/index.html
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/petsc/src/ksp/ksp/examples/tests/makefile
/petsc/src/ksp/ksp/examples/tutorials/ex29.c
/petsc/src/ksp/ksp/examples/tutorials/ex31.c
/petsc/src/ksp/ksp/examples/tutorials/ex32.c
/petsc/src/ksp/ksp/examples/tutorials/ex34.c
/petsc/src/ksp/ksp/examples/tutorials/ex46.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex34_1.out
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/pc/impls/asa/asa.c
/petsc/src/ksp/pc/impls/svd/svd.c
/petsc/src/ksp/pc/impls/wb/wb.c
/petsc/src/mat/examples/tests/ex94.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex94_1.out
/petsc/src/mat/examples/tutorials/makefile
/petsc/src/mat/impls/aij/mpi/mpiptap.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/impls/aij/seq/matrart.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/snes/examples/tutorials/ex47cu.cu
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex5_5_ncg.out
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/petsc/src/snes/examples/tutorials/output/ex5_5_ngmres_richardson.out
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/fas/fasimpls.h
/petsc/src/snes/impls/ncg/snesncg.c
/petsc/src/snes/impls/ngmres/snesngmres.c
/petsc/src/snes/impls/ngmres/snesngmres.h
/petsc/src/snes/impls/richardson/snesrichardson.c
/petsc/src/snes/interface/snes.c
/petsc/src/sys/bag/bag.c
/petsc/src/sys/bag/f90-custom/zbagf90.c
/petsc/src/sys/error/err.c
/petsc/src/sys/error/signal.c
/petsc/src/sys/examples/tutorials/ex5.c
/petsc/src/sys/examples/tutorials/ex5f90.F90
options.c
/petsc/src/sys/shell/examples/tutorials/makefile
/petsc/src/sys/shell/interface/sysshell.c
/petsc/src/sys/utils/psplit.c
/petsc/src/tops/tops.html
/petsc/src/tops/topsinstaller.html
/petsc/src/ts/impls/rosw/rosw.c
44c93de918-Nov-2011 Satish Balay <balay@mcs.anl.gov>

64bit-indices fix on windows

Hg-commit: a97281181d4455ab2d11341517aec501f226d663


/petsc/bin/maint/rebuildtar
/petsc/conf/rules
/petsc/config/PETSc/utilities/scalarTypes.py
/petsc/include/finclude/ftn-custom/makefile
/petsc/include/finclude/petscmat.h
/petsc/include/petscsys.h
/petsc/src/dm/impls/iga/iga.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/ksp/pc/impls/asa/asa.c
options.c
a70650f615-Nov-2011 Barry Smith <bsmith@mcs.anl.gov>

Sean didn't push fix for missing #endif

Hg-commit: f43872cbcf759a9622473eee84da2ee8a5d53190


pinit.c
38d9cefc15-Nov-2011 Barry Smith <bsmith@mcs.anl.gov>

commit after pull from 3.2

Hg-commit: 12bf7f190e2a9b0eafa5d8c78eb160b07da3d705


/petsc/config/PETSc/packages/hypre.py
/petsc/src/dm/impls/mesh/meshcreate.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/jacobi/jacobi.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.h
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/ij/matij.c
/petsc/src/mat/interface/matrix.c
pinit.c
/petsc/src/ts/impls/implicit/gl/gl.c
7a5eb96b15-Nov-2011 Barry Smith <bsmith@mcs.anl.gov>

pass VALGRIND_INCLUDE only in directory needed

Hg-commit: 0910059a918421cca01476a2c545fa60235f3b12


/petsc/config/PETSc/Configure.py
/petsc/src/ksp/ksp/examples/tutorials/ex22f.F
/petsc/src/ksp/ksp/examples/tutorials/ex25.c
/petsc/src/ksp/ksp/examples/tutorials/ex28.c
/petsc/src/ksp/ksp/examples/tutorials/ex45.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex25_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex25_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex28_1.out
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/snes/examples/tutorials/makefile
makefile
47abebeb15-Nov-2011 Sean Farley <sean@mcs.anl.gov>

Fixed Barry's missing #endif for the missing lsame_ function

Hg-commit: b600e5e603310846f5d6f5348a13042fd990504d


pinit.c

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