fix compile warnings with MPI-IO changes

Hg-commit: 81e200c5ad71835daaafa31bbc03ebb7171e4d36

changed PetscEvent to PetscLogEvent
Removed initialization of global variables PetscLogEvent and PetscCookie to 0 since no longer needed

Hg-commit: b49d69f3756a139801bd445902e6aa5221450631

changed PetscLogClassRegister() to PetscCookieRegister() and fixed calling sequence

Hg-commit: 9bf4c5c14bd579a1e7136bac681411624d111bf5

finished MPI IO version of binary viewer for Bags and with proper byte swapping for Intel with MPI IO

Hg-commit: 616bc2eeccfdf68ff3d242ffb3d0dcd0f069cbb2

added event counter for multiphysics example functions
added improved coloring for dmcomposite that uses coloring from each dm

Hg-commit: b0839793e9d9d172f285b78009462ff96493f231

removed no longer needed converts of Fortran to C MPI_Comm (since MPI 1.1 has a standard for this)

Hg-commit: 263aca0fcfe7efcaed30a4abb46e648de3bb24ab

changed -np to -n for option used to pass number of processes to mpiexec in PETSc makefiles etc

Hg-commit: 32818c3c1dacc61b71d5dc1de8d364ff38c269b9

fix zope error when socket.h is unavailable

Hg-commit: f3ea3bbe39b61dc9f1ef1a38845cfd85022c8345

disable zope functionality on BGL - as SO_REUSEADDR
is not defined on it.

Hg-commit: 40ef07b3891abfac81b1cdfd03f59790123769b6

revert buggy changes in d647f6c6c8d3 to PetscOptionsInsertFile()

Hg-commit: b0fa1076fd7f918f6194a9e861ce2fa9a5f681aa

PetscTokenFind() will now treat everything inside a " " as a single token

Hg-commit: d647f6c6c8d3c51e33a75b9ce8831b03ee547a4d

fix memory leak in options code

Hg-commit: a9cef063eacb376cb1d0aa84e133483571c898f8

enable comments to start anywhere in options file.

Hg-commit: d96b3a87685abda36b664a0753e8865e171bce30

ignore spaces [at the end of line] properly from optionsfile

Hg-commit: 117e12bc1e9292c838e079a9edf77490d2cd59e7

fix openmp codechange that disabled options_left

Hg-commit: 2943d2e52467753b20f443a5012961b1aec495ce

fixed bug introduce yesterday into OpenMP code that caused crash in PetscOpenMPFinalize() because if
openmp options not used, still tried to broadcast to local mpi world

Hg-commit: cd36c927d50c62573

fixed bug introduce yesterday into OpenMP code that caused crash in PetscOpenMPFinalize() because if
openmp options not used, still tried to broadcast to local mpi world

Hg-commit: cd36c927d50c62573c85ec0933e12faa01f02619

show more ...

fix bad initialization of used_PetscOpenMP [breaks 'make test']

Hg-commit: 912be778bc38c4336b702daac79bf4439f8bf192

when OpenMP mode is used either via PetscOpenMPMerge or PetscOpenMPISpawn() the PETSc finalize
will not call PetscOptionsLeft() because the worker process generally do not access the options
the "reg

when OpenMP mode is used either via PetscOpenMPMerge or PetscOpenMPISpawn() the PETSc finalize
will not call PetscOptionsLeft() because the worker process generally do not access the options
the "regular" processes access.

Hg-commit: bb2d8769b7f8870c266d058e3bd489f94bc807c5

show more ...

more docs for -openmmp_merge/spawn etc
docs on using variables only file in makefile
x

Hg-commit: e01fc5624534dbdc4fc4088fa76be6d73a097208

Merge

Hg-commit: d5c0007f2e3c7af55d10e525bc4c1bbb413bb214

Merge

Hg-commit: 104c3aefa63b134df0369032dcd445a192dd8906

implemented Model 1 of Paul Fischer's initial guess generator; uses classical Gram-Schmidt (may be unstable?)

Hg-commit: d7eb740eb5ccc53e50bcb12a80c20e1393300d21

Fixed docs

Hg-commit: 6f8fa61bd69a693f33619ba079564e1062787a2c

mv zpetsc.h (a meaningless name) to fortranimpl.h (a slightly more meaningful name)

Hg-commit: d2687f12f92bff49ceff434100d018f6898829c3

removed support for old Cray Fortran charactor strings with cptofcd

Hg-commit: 90c05a4077e8e29d3872dcc8e341e586062f102d