Rename PetscObjectContainer to PetscContainer

Hg-commit: 05bce231e4bd6c5dbd5c28782c5c6dc4de5c997c

Small fix for PetscObjectContainer


Hg-commit: c0405f84eb5654096523719f26771a2d60b38bfe

changes for correct reference counting

Hg-commit: 7240f091687d23f6eb0fb787008189c237331f2e

fixed caps in PCPROMETHIUS and PCCHOLESKY, how could it have been so wrong?
sor error check for zero diagonal entry
cleaned up snes ex22.c to support both matrix based and matrrix free.

Hg-commit:

fixed caps in PCPROMETHIUS and PCCHOLESKY, how could it have been so wrong?
sor error check for zero diagonal entry
cleaned up snes ex22.c to support both matrix based and matrrix free.

Hg-commit: 6f3fdd121e9dccc609ef0b12f66d21e9a41abc9b

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New helper functions for tags


Hg-commit: b96f5c5c6ea9fd443974d45cf22e38005d463907

fix compile errors on windows

Hg-commit: 2f5111459b025b0b0c431de4eda0c1565cea4603

Fixed ex2, Moved partitioning to Partitioner.hh, Moved numbering code to Numbering.hh
- Label creation was causing a tag mismatch
CoSieve.hh:
- Fixed Topology.getLabels()
- Fixed Section.reallocat

Fixed ex2, Moved partitioning to Partitioner.hh, Moved numbering code to Numbering.hh
- Label creation was causing a tag mismatch
CoSieve.hh:
- Fixed Topology.getLabels()
- Fixed Section.reallocate() which was severely broken
- Moved partitioning code
Completion.hh:
- Moved numbering code to Numbering.hh
- Moved scatterTopology() to Distribution.hh
- Fixed PartitionSection to use points instead of numbering
- Fixed scatterSieve(), now creates correct local sieve and generalized overlap creation
- Split out scatterCones()
Distribution.hh:
- Now have scatterTopology()
- Added unifyMesh() and unifyTopology()
Generator.hh:
- Fixed Triangle generation and refinement (mostly tag mismaches and using new unify)
Added PetscCommCheckTags()
- Tags can get out of sync on different processes


Hg-commit: d3eca209d5730c765a87fa7e20eaa69db5de41a6

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more optionshelp cleanup

Hg-commit: 53bf0428bc8e960cf315bbede643434f370c7482

avoid printing the same help string multiple times [from the same proc]

Hg-commit: 81752c539c27a42bb4f4d9548d5a2e9a606713d4

fix warnings with borland compilers

Hg-commit: 253b5a22d7602c492a3d03a96321565a3bef3975

pinit.c:
- Added package finalize for DM
petscmesh.h:
meshimpl.h:
- Added Section type
dlregisdm.c:
- Registered Section stuff
- Added DMFinalizePackage()
mesh1.cc:
overlap2.cxx:
overlapTest.h:
s

pinit.c:
- Added package finalize for DM
petscmesh.h:
meshimpl.h:
- Added Section type
dlregisdm.c:
- Registered Section stuff
- Added DMFinalizePackage()
mesh1.cc:
overlap2.cxx:
overlapTest.h:
sieveTest.h:
topology1.cxx:
- Upgraded to new interface
overlap1.cxx:
- No longer works
zmesh.c:
- Added SectionComplete()
mesh.c:
- Added MeshFinalize()
- Added SectionComplete()
- Converted numbering and global orders
- Fixed VTK output
meshpcice.c:
meshpylith.c:
meshvtk.h:
- Convertes numbering and global order
ALE_containers.hh:
- Fixed constructor for Point
CoSieve.hh:
- Added overlap to Topology
- Now setFiberDimension() can take a sequence
Completion.hh:
- Redid Numbering and GlobalOrder
- Added NumberingFactory
Mesh.hh:
- Moved numberings and orders out


Hg-commit: a565f5a9b105b9bf03f89f0473c9d6f072311e8e

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bug fix for PetscBinaryRead when filename passed in
bug fixes for fieldsplit preconditioner
enhancement to PetscOptionsGetIntArray() to support 0-23 notation
added symmetric_multiplicative to fieldsp

bug fix for PetscBinaryRead when filename passed in
bug fixes for fieldsplit preconditioner
enhancement to PetscOptionsGetIntArray() to support 0-23 notation
added symmetric_multiplicative to fieldsplit
minor cleanup

Hg-commit: 4f04561d24dfb0b158d6ddfdd5949da977f645be

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changed ksp,snes,ts monitor function names and command line options
to a consistent model like the -ksp_view_.... model.

Hg-commit: 59f4eafae0b5023efcea351555f5a4c24277ba99

A few more fixes to the options database monitor.


Hg-commit: f25bd98549a900b6be060d9eb162c90adbd4d5b0

Added a user-defined options database monitor function, which is invoked
each time an option value is set or cleared.


Hg-commit: a9e7923b0b90c9545450536c15ef1ce9a68781cd

petscmesh.h:
mesh.c:
Mesh.hh:
- Ripped out a lot of dead code
- Working with new code
meshpcice.c:
meshpylith.c:
meshpylith.h:
- Compiling, but not yet fixed
meshvtk.h:
- Working in parallel with

petscmesh.h:
mesh.c:
Mesh.hh:
- Ripped out a lot of dead code
- Working with new code
meshpcice.c:
meshpylith.c:
meshpylith.h:
- Compiling, but not yet fixed
meshvtk.h:
- Working in parallel with new code
meshTest.hh:
CoSieve.hh:
- Moved partitioning to Partitioner in CoSieve.hh
sieveTest.hh:
Completion.hh:
- Moved custom sections to Completion.hh
- Cleaned up references to test headers
Distribution.hh:
- Includes mesh distribution and element numbering
ex1.c:
- Working with new code
overlap2.cxx
- Still broken
sieve2.cxx:
- Small fixes


Hg-commit: 0c36a9b8800b74b5cc1c677c1e446e0583fe4322

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Now have an anstraction for sending/receiving sections
Fixed tag synchronization code


Hg-commit: 62c89e7e5b0441905297e39220ecfe66e8f4e8ae

Sieve distribution now working
- Had to synchronize tags on PETSC_COMM_WORLD afterwards because I create types on a subset of processors


Hg-commit: 2060822565af527b394e642b8d7b4c1ec203b1b3

Added PetscObjectCreateGeneric
Mesh additions
Added python processor for log_summary (preliminary)
Added check for cxxabi.h
Generic naming functions
Use static allocators
Destroy Sifter obj

Added PetscObjectCreateGeneric
Mesh additions
Added python processor for log_summary (preliminary)
Added check for cxxabi.h
Generic naming functions
Use static allocators
Destroy Sifter objects correctly (I think)


Hg-commit: 5600b9fe9f7852629ddc8dcba4623fab96c33c8e

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more C99 complex fixes
- perhaps use __cplusplus instead of PETSC_CLANGUAGE_CXX?


Hg-commit: 99e51a3a3b0996a67378e29445c7effe6710f2c8

C99 complex support contrib by Mathieu Taillefumier <taillefu@mpi-halle.mpg.de>


Hg-commit: 1231aa03fa59fd9c373062e473228c578f2118d3

bk-changeset-1.4252
balay@asterix.mcs.anl.gov|ChangeSet|20060410230238|47614
ChangeSet
1.4252 06/04/10 18:02:38 balay@asterix.mcs.anl.gov +6 -0
- PetscGetVersion also takes the string-len
- mov

bk-changeset-1.4252
balay@asterix.mcs.anl.gov|ChangeSet|20060410230238|47614
ChangeSet
1.4252 06/04/10 18:02:38 balay@asterix.mcs.anl.gov +6 -0
- PetscGetVersion also takes the string-len
- move call to PetscGetVersion into PetscErrorPrintfInitialize()
- reformat error message for SIGERROR

src/sys/plog/plog.c
1.82 06/04/10 18:02:36 balay@asterix.mcs.anl.gov +1 -1
PetscGetVersion also takes the string-len

src/sys/objects/init.c
1.64 06/04/10 18:02:35 balay@asterix.mcs.anl.gov +2 -2
PetscGetVersion also takes the string-len

src/sys/error/signal.c
1.46 06/04/10 18:02:35 balay@asterix.mcs.anl.gov +3 -2
reformat error message

src/sys/error/errtrace.c
1.20 06/04/10 18:02:35 balay@asterix.mcs.anl.gov +2 -2
- PetscGetVersion also takes the string-len
- move call to PetscGetVersion into PetscErrorPrintfInitialize()

src/sys/draw/impls/ps/pops.c
1.19 06/04/10 18:02:35 balay@asterix.mcs.anl.gov +1 -1
PetscGetVersion also takes the string-len

include/petscversion.h
1.202 06/04/10 18:02:35 balay@asterix.mcs.anl.gov +6 -3
PetscGetVersion also takes the string-len


Hg-commit: 3cb6ec3ca9b674eb9ee408b0a5b07704bb712926

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bk-changeset-1.4244
bsmith@barrys-computer.local|ChangeSet|20060406172814|53308
ChangeSet
1.4244 06/04/06 12:28:14 bsmith@barrys-computer.local +1 -0
Merge bk://petsc@petsc.bkbits.net/petsc-dev

bk-changeset-1.4244
bsmith@barrys-computer.local|ChangeSet|20060406172814|53308
ChangeSet
1.4244 06/04/06 12:28:14 bsmith@barrys-computer.local +1 -0
Merge bk://petsc@petsc.bkbits.net/petsc-dev
into barrys-computer.local:/Users/bsmith/Src/petsc-dev

src/sys/objects/pinit.c
1.77 06/04/06 12:28:09 bsmith@barrys-computer.local +0 -0
Auto merged


Hg-commit: 9a8dc80cccaa058bdfecb5421d6bafe0bba42418

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bk-changeset-1.4229.1.1
bsmith@barrys-computer.local|ChangeSet|20060406172743|21776
ChangeSet
1.4229.1.1 06/04/06 12:27:43 bsmith@barrys-computer.local +5 -0
pinit.c:
beats me
package.py:

bk-changeset-1.4229.1.1
bsmith@barrys-computer.local|ChangeSet|20060406172743|21776
ChangeSet
1.4229.1.1 06/04/06 12:27:43 bsmith@barrys-computer.local +5 -0
pinit.c:
beats me
package.py:
warn about -with-dir and -with-include
petscmat.h, aij.c:
added MatCreateMPIAIJWithArrays()
mpiaij.c:
fix comments for MatMPIAIJSetPreallocationCSR()
adding MatCreateMPIAIJWithArrays()

src/sys/objects/pinit.c
1.75.1.1 06/04/06 12:26:48 bsmith@barrys-computer.local +2 -2
beats me

python/PETSc/package.py
1.93 06/04/05 19:49:51 bsmith@barrys-computer.local +4 -0
warn about -with-dir and -with-include

include/petscmat.h
1.211 06/04/05 16:03:59 bsmith@internal.address.see.rfc1918.mc.net +1 -0
added MatCreateMPIAIJWithArrays()

src/mat/impls/aij/seq/aij.c
1.255 06/04/05 16:03:50 bsmith@internal.address.see.rfc1918.mc.net +1 -1
added MatCreateMPIAIJWithArrays()

src/mat/impls/aij/mpi/mpiaij.c
1.274 06/04/05 16:03:35 bsmith@internal.address.see.rfc1918.mc.net +5 -1
fix comments for MatMPIAIJSetPreallocationCSR()

src/mat/impls/aij/mpi/mpiaij.c
1.273 06/04/05 16:01:49 bsmith@internal.address.see.rfc1918.mc.net +52 -1
adding MatCreateMPIAIJWithArrays()


Hg-commit: 0bf5b051fbe92a6108c9eed95f81491becf4183a

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bk-changeset-1.4019.1.48
balay@asterix.mcs.anl.gov|ChangeSet|20060405171324|13518
ChangeSet
1.4019.1.48 06/04/05 12:13:24 balay@asterix.mcs.anl.gov +2 -0
options_left fix with previous patch

s

bk-changeset-1.4019.1.48
balay@asterix.mcs.anl.gov|ChangeSet|20060405171324|13518
ChangeSet
1.4019.1.48 06/04/05 12:13:24 balay@asterix.mcs.anl.gov +2 -0
options_left fix with previous patch

src/sys/plog/plog.c
1.78.1.1 06/04/05 12:13:22 balay@asterix.mcs.anl.gov +1 -1
fix error in instructions

src/sys/objects/pinit.c
1.76 06/04/05 12:13:22 balay@asterix.mcs.anl.gov +1 -0
fix bug introduced in previous patch [with options_left]


Hg-commit: 53bd2570ffcce47077248b2a132f806e2de5f1b8

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