Add PetscFunctionBeginUser to all PETSc C/C++ examples

Now the stack frames will contain the main program and the correct line numbers in them

git ls-files | egrep "(tutorials|tests)" | xargs sed -

Add PetscFunctionBeginUser to all PETSc C/C++ examples

Now the stack frames will contain the main program and the correct line numbers in them

git ls-files | egrep "(tutorials|tests)" | xargs sed -i "s?\(PetscCall(PetscInitialize(&argc\)?PetscFunctionBeginUser;\n \1?g"

Commit-type: error-checking, testing-fix
/spend 15m

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Improved manual pages for PetscContainer and its use with PetscObjectCompose

Add tick marks for PETSc functions in manual pages in inherit.c

Commit-type: documentation
\spend 10m

Rename PetscStackCallExternalNoErrorCode to PetscStackCallExternalVoid

I tried to rebase this into the commit that introduced PetscStackCallExternalNoErrorCode but that produced a mass
of bad merges

Rename PetscStackCallExternalNoErrorCode to PetscStackCallExternalVoid

I tried to rebase this into the commit that introduced PetscStackCallExternalNoErrorCode but that produced a mass
of bad merges; I am not sure why, so this stands along. Annoying for code review but bisection will work which
is the important thing.

Commit-type: housekeeping
/spend 2m
Reported-by: Stefano Zampini

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Add PETSc CI mode to allow better handling of errors and system dependent output when running in test harness

-petsc_ci - automatically set for all runs in test harness

-petsc_ci_portable_error_out

Add PETSc CI mode to allow better handling of errors and system dependent output when running in test harness

-petsc_ci - automatically set for all runs in test harness

-petsc_ci_portable_error_output - ensures all error messages (when possible are system and compiler information),
should be only used in tests that are explicitly testing the error handling

This allows proper comparisons of runs on different machines and when errors are intentionally triggered to test error handling

Commit-type: error-checking, testing-fix
/spend 5h

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Make a bad default petscstack a hard error, always checked in debug mode, also make more efficient, strcmp() no longer needed

Jacob - you need to check this, I could have messed up some of your more

Make a bad default petscstack a hard error, always checked in debug mode, also make more efficient, strcmp() no longer needed

Jacob - you need to check this, I could have messed up some of your more delicate PetscStack work

Commit-type: error-checking, debugability
/spend 1h

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Cleanup and unify naming of PetscCall routines

Commit-type: housekeeping
/spend 10m

Added -mpi_linear_solver_server that allows using MPI parallel KSP solvers from sequential or OpenMPI code

Uses -ksp_type preonly -pc_type mpi The inner KSP has a prefix of -mpi

-mpi_linear_solver_

Added -mpi_linear_solver_server that allows using MPI parallel KSP solvers from sequential or OpenMPI code

Uses -ksp_type preonly -pc_type mpi The inner KSP has a prefix of -mpi

-mpi_linear_solver_server_view gives a very short summary of the solves

Commit-type: feature
/spend 15h

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Merge branch 'wence/petsc-check-do-while' into 'main'

Wrap PetscCheck and PetscAssert in do { } while (0)

Closes #1199

See merge request petsc/petsc!5291

Merge branch 'release'

build: fix typo with MPICH_VERSION

Reported-by: "Dudson, Benjamin Daniel" <dudson2@llnl.gov>

Wrap PetscCheck and PetscAssert in do { } while (0)

These macros look like functions, so they should behave like
functions. Fix up the resulting invalid syntax due to the previous
behaviour of these

Wrap PetscCheck and PetscAssert in do { } while (0)

These macros look like functions, so they should behave like
functions. Fix up the resulting invalid syntax due to the previous
behaviour of these macros being "if (...)
statement_without_semicolon". Fixes #1199.

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Change if () { PetscCall() } three liner and friends to one liners

for i in `git ls-files | grep "\.[ch]$"` ; do sed 's?\$?ZZZ?g' $i | tr '\n' '$' | sed 's?\([ ]*\)if (\([-;,.\*+=a-z0-9A-Z_>]*\)) {\

Change if () { PetscCall() } three liner and friends to one liners

for i in `git ls-files | grep "\.[ch]$"` ; do sed 's?\$?ZZZ?g' $i | tr '\n' '$' | sed 's?\([ ]*\)if (\([-;,.\*+=a-z0-9A-Z_>]*\)) {\$[ ]*PetscCall(\([- ._+=a-z0-9A-Z>*,()]*);\)\$[ ]*}\$?\1if (\2) PetscCall(\3$?g' | tr '$' '\n' | sed 's?ZZZ?$?g' > $i.joe ; mv $i.joe $i ; done

for i in `git ls-files | grep "\.[hc]$"` ; do sed 's?\$?ZZZ?g' $i | tr '\n' '$' | sed 's?\([ }else]*\)if (\([-;,.\*+=a-z0-9A-Z_>]*\)) {\$[ ]*PetscCall(\([- ._+=a-z0-9A-Z>*,()]*);\)\$\([ ]*\)} \([- ._+=a-z0-9A-Z>*,()]*);\)\$?\1if (\2) PetscCall(\3$\4\5$?g' | tr '$' '\n' | sed 's?ZZZ?$?g' > $i.joe ; mv $i.joe $i ; done

Yes, really ugly but Barry still cannot master awk

Commit-type: housekeeping

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PetscObjectFunctionCompose: clean up composed functions at Destroy time

Merge branch 'stefanozampini/gdsw-mg' into 'main'

Implement AGDSW coarse spaces for PCMG

See merge request petsc/petsc!5256

Merge remote-tracking branch 'origin/release'

Minor

gobble any errors from cupmGetNumDevices() if we aren't eagerly initializing

Merge branch 'jczhang/revise-gpu-microbenchmarks' into 'main'

Initialize device early to get more accurate timing

See merge request petsc/petsc!5278

Merge remote-tracking branch 'origin/release'

Sys: initialize device early to get more accurate timing

Merge branch 'barry/2022-05-22/fix-const-decl-malloc/release' into 'release'

Fixes for variables declared with const char **val and similar with PetscMalloc() and PetscFree()

See merge request pets

Merge branch 'barry/2022-05-22/fix-const-decl-malloc/release' into 'release'

Fixes for variables declared with const char **val and similar with PetscMalloc() and PetscFree()

See merge request petsc/petsc!5263

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Fixes for variables declared with const char **val and similar

E:\FGH\Git\Windows\petsc-3.17.1\src\sys\objects\options.c(716): warning C4090: 'function': different 'const' qualifiers
E:\FGH\Git\Wind

Fixes for variables declared with const char **val and similar

E:\FGH\Git\Windows\petsc-3.17.1\src\sys\objects\options.c(716): warning C4090: 'function': different 'const' qualifiers
E:\FGH\Git\Windows\petsc-3.17.1\src\sys\objects\options.c(757): warning C4090: 'function': different 'const' qualifiers

A PetscMalloc() that does not belong in index.c

Microsoft (R) C/C++ Optimizing Compiler Version 19.29.30133 for x64

Commit-type: portability-fix
/spend 15m
Reported-by: Henrik Büsing <Henrik.Buesing@fgh-ma.de>

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crusher: update build to work with craype-accel-amd-gfx90a module via --with-openmp=1

Merge remote-tracking branch 'origin/release'

A few codespell fixes