unconstrained - OpenGrok history log for /petsc/src/tao/unconstrained

Revision	Date	Author	Comments (<<< Hide modified files) (Show modified files >>>)
e4b1ea68	23-Nov-2017	Barry Smith <bsmith@mcs.anl.gov>	Remove C++ comments, add missing output file, prevent clang static analyzer warning divide by zero Commit-type: bug-fix, portability-fix, testing-fix Reported-by: nightly tests examples/tutorials/output/spectraladjointassimilation_1.out examples/tutorials/output/spectraladjointassimilation_2.out examples/tutorials/output/spectraladjointassimilation_cn.out examples/tutorials/spectraladjointassimilation.c
79f5d8ca	23-Nov-2017	Barry Smith <bsmith@mcs.anl.gov>	Minor features for Tao, update example to output convergence history for Matlab Commit-type: feature, documentation, example /petsc/include/petsctao.h /petsc/src/tao/interface/fdtest.c /petsc/src/tao/interface/taosolver.c examples/tutorials/convergencestudy.m examples/tutorials/spectraladjointassimilation.c
59608ed1	22-Nov-2017	Barry Smith <bsmith@mcs.anl.gov>	Fix terminology in example so objective is not used (confusingly) for two different things Commit-type: style-fix examples/tutorials/spectraladjointassimilation.c
f1e87422	22-Nov-2017	Barry Smith <bsmith@mcs.anl.gov>	Add note that about scaling of advection term or I might forget Commit-type: documentation examples/tutorials/spectraladjointassimilation.c
d1f4f9e5	22-Nov-2017	Barry Smith <bsmith@mcs.anl.gov>	Add test case with nonzero advection speed Commit-type: testing-fix,style-fix, feature examples/tutorials/spectraladjointassimilation.c
0ed3bfb6	17-Nov-2017	Barry Smith <bsmith@mcs.anl.gov>	Clean up simple spectral adjoint example, add advection term Add crosslinks for some TS example and additional monitor functions Commit-type: testing-fix,style-fix, feature /petsc/include/petscdraw.h /petsc/include/petscts.h /petsc/src/docs/tex/petsc.bib /petsc/src/sys/classes/draw/impls/x/ximpl.h /petsc/src/sys/classes/draw/utils/lgc.c examples/tutorials/makefile examples/tutorials/output/spectraladjointassimilation_1.out examples/tutorials/output/spectraladjointassimilation_cn.out examples/tutorials/spectraladjointassimilation.c /petsc/src/ts/interface/ts.c /petsc/src/ts/utils/dmts.c
f9b48d8e	17-Nov-2017	Barry Smith <bsmith@mcs.anl.gov>	change name of example, clean it up a bit, update output tests Commit-type: testing-fix,style-fix, feature examples/tutorials/makefile examples/tutorials/output/spectraladjointassimilation_1.out examples/tutorials/output/spectraladjointassimilation_cn.out examples/tutorials/spectraladjointassimilation.c
c0f02a64	17-Nov-2017	Barry Smith <bsmith@mcs.anl.gov>	Add support for not using the built in linear Jacobian examples/tutorials/heat-data-assimulation.c
5c94682c	17-Nov-2017	Barry Smith <bsmith@mcs.anl.gov>	Add analytic solution with analytic error computation /petsc/src/sys/classes/gll/petscgll.c examples/tutorials/heat-data-assimulation.c
11e1d5c3	15-Nov-2017	Barry Smith <bsmith@mcs.anl.gov>	New generation of initial conditions and solution for Tao/TS heat example Add support for generating and loading reference solutions Commit-type: feature examples/tutorials/heat-data-assimulation.c examples/tutorials/output/heat-data-assimulation_1.out examples/tutorials/output/heat-data-assimulation_cn.out /petsc/src/ts/interface/ts.c /petsc/src/ts/trajectory/interface/traj.c
6d154d63	15-Nov-2017	Barry Smith <bsmith@mcs.anl.gov>	Remove unneeded/unused variables Commit-type: style-fix examples/tutorials/heat-data-assimulation.c
0a59842c	15-Nov-2017	Barry Smith <bsmith@mcs.anl.gov>	Missing CHKERRQ() in example Commit-type: testing-fix,style-fix Reported-by: nightly builds Thanks-to: Satish Balay <balay@mcs.anl.gov> examples/tutorials/heat-data-assimulation.c /petsc/src/ts/trajectory/interface/traj.c
9afe7f3e	14-Nov-2017	Barry Smith <bsmith@mcs.anl.gov>	Add error checking for TSTrajectory dirname and filetemplate and do not reproduce template on each call. Also fix makefile for TAO/TS example Commit-type: bug-fix, portability-fix,style-fix, featur Add error checking for TSTrajectory dirname and filetemplate and do not reproduce template on each call. Also fix makefile for TAO/TS example Commit-type: bug-fix, portability-fix,style-fix, feature Thanks-to: Hong Zhang <hongzhang@anl.gov> Development Tools: Vim, Emacs, Eclipse show more ... /petsc/include/petsc/private/tsimpl.h examples/tutorials/makefile /petsc/src/ts/trajectory/impls/basic/trajbasic.c /petsc/src/ts/trajectory/interface/traj.c
d6d444b2	14-Nov-2017	Barry Smith <bsmith@mcs.anl.gov>	Moved creation/destruction of TS and setting its options out of optimization loop examples/tutorials/heat-data-assimulation.c
e3aab17e	14-Nov-2017	Barry Smith <bsmith@mcs.anl.gov>	Cleanup of code, making it clearer/simplier, removed use of C++ template keyword Commit-type: bug-fix, portability-fix, style-fix, example examples/tutorials/heat-data-assimulation.c /petsc/src/ts/trajectory/impls/basic/trajbasic.c
2a7d454b	14-Nov-2017	Barry Smith <bsmith@mcs.anl.gov>	minor cleaning of source code and comments examples/tutorials/heat-data-assimulation.c
1585b412	14-Nov-2017	Barry Smith <bsmith@mcs.anl.gov>	Fix handling of TSTrajectory file templates, fix heat-data-assimulation.c computation of gradient Code assumed TSTrajectorySetFromOptions() was called after one set the trajectory filename and templ Fix handling of TSTrajectory file templates, fix heat-data-assimulation.c computation of gradient Code assumed TSTrajectorySetFromOptions() was called after one set the trajectory filename and template and built the final template in TSTrajectorySetFromOptions(). Thus calling the routines TSTrajectorySetDirname() after calling TSTrajectorySetFromOptions() meant it was ignored. Also the -ts_trajectory_file name is the incorrect translation of TSTrajectorySetFiletemplate() Added large comment to heat-data-assimulation.c explain how to handle adjoint computation with mass matrix Commit-type: bug-fix, style-fix, documentation, example show more ... examples/tutorials/heat-data-assimulation.c examples/tutorials/output/heat-data-assimulation_1.out examples/tutorials/output/heat-data-assimulation_cn.out /petsc/src/ts/examples/tutorials/advection-diffusion-reaction/makefile /petsc/src/ts/interface/ts.c /petsc/src/ts/trajectory/interface/traj.c
84a45834	14-Nov-2017	Barry Smith <bsmith@mcs.anl.gov>	Fix TSTrajectory handling of directory name and filetemplate So that TSSetFromOptions() and TSTrajectorySetFromOptions() need not be called and work directory name and templace still function Fix b Fix TSTrajectory handling of directory name and filetemplate So that TSSetFromOptions() and TSTrajectorySetFromOptions() need not be called and work directory name and templace still function Fix badly formated TEST in example that prevented it from being run Commit-type: bug-fix show more ... /petsc/bin/maint/runhtml.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/libraries.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/mkl_sparse.py /petsc/config/BuildSystem/config/packages/mkl_sparse_optimize.py /petsc/config/configure.py /petsc/config/examples/arch-pardiso.py /petsc/include/petsc/finclude/petsc.h 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3dbe5f68	13-Nov-2017	Barry Smith <bsmith@mcs.anl.gov>	Yet more fixes for handling SETERQ/A for Fortran Commit-type: bug-fix Reported-by: nightly builds Thanks-to: Satish Balay <balay@mcs.anl.gov> /petsc/bin/maint/builddist /petsc/bin/maint/buildtest /petsc/bin/maint/runhtml.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/BuildSystem/config/packages/metis.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/PETSc/Configure.py /petsc/include/petsc/finclude/petscao.h /petsc/include/petsc/finclude/petscmat.h /petsc/include/petsc/finclude/petscsys.h /petsc/include/petsc/finclude/petscts.h /petsc/include/petsc/mpiuni/mpi.h /petsc/include/petsc/mpiuni/mpif.h /petsc/include/petsc/private/f90impl.h /petsc/include/petsc/private/fortranimpl.h /petsc/include/petscdmplex.h /petsc/include/petscmat.h /petsc/include/petscsftypes.h /petsc/include/petscsys.h 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f4c1ad5c	22-Oct-2017	Stefano Zampini <stefano.zampini@gmail.com>	TAO: added matrix-free finite difference option for Hessian evaluation and VecLock{Push\|Pop} around user calls Added test for MFFD hessian Fix several examples that improperly used VecGetArray Fix m TAO: added matrix-free finite difference option for Hessian evaluation and VecLock{Push\|Pop} around user calls Added test for MFFD hessian Fix several examples that improperly used VecGetArray Fix man pages and some coding style in tao code show more ... /petsc/.travis.yml /petsc/bin/maint/builddist /petsc/bin/maint/buildtest /petsc/bin/maint/runhtml.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/BuildSystem/config/packages/metis.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/PETSc/Configure.py /petsc/include/petsc/finclude/petscmat.h /petsc/include/petsc/finclude/petscts.h /petsc/include/petscdmplex.h 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7fb8a5e4	03-Oct-2017	Karl Rupp <me@karlrupp.net>	Fixed compiler warnings when using MPIUNI, optimized build. Reported-by: Jose E. 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1ef7c9b6	11-Aug-2017	Stefano Zampini <stefano.zampini@gmail.com>	Recreate the ghosted DMDA in any case it may happen that the ghosted DMDA has been already created (and composed with the DMDA) but the viewer needs to be setup again This bug was originated from Recreate the ghosted DMDA in any case it may happen that the ghosted DMDA has been already created (and composed with the DMDA) but the viewer needs to be setup again This bug was originated from the TAO example heat-data-assimulation.c Fix the example removing the deprecated TaoSetDuration and by properly initizaling the steps variable show more ... /petsc/bin/maint/buildtest /petsc/bin/maint/confignightly/knl /petsc/bin/maint/confignightly/ps4 /petsc/bin/maint/confignightly/ps4-3 /petsc/bin/maint/confignightly/ps4-5 /petsc/bin/maint/confignightly/wii /petsc/bin/maint/confignightly/wii3 /petsc/config/BuildSystem/config/packages/mpfr.py /petsc/config/builder.py /petsc/config/examples/arch-c-exodus-dbg-builder.py /petsc/config/examples/arch-cuda-double.py /petsc/config/examples/arch-cuda-single.py /petsc/config/examples/arch-linux-knl.py /petsc/config/examples/arch-mswin-cuda.py /petsc/config/examples/arch-mswin-opt-impi.py /petsc/include/petsc.h /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petsc/private/fortranimpl.h /petsc/include/petsc/private/matimpl.h /petsc/include/petsc/private/petscimpl.h /petsc/include/petsc/private/tsimpl.h /petsc/include/petscdmplex.h /petsc/include/petscdraw.h /petsc/include/petscmat.h /petsc/include/petscmath.h /petsc/include/petscts.h /petsc/include/petscviewer.h /petsc/src/dm/examples/tutorials/ex15.c /petsc/src/dm/examples/tutorials/makefile /petsc/src/dm/impls/da/grglvis.c /petsc/src/dm/impls/forest/p4est/pforest.c /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/plex/plexdistribute.c /petsc/src/dm/impls/plex/plexglvis.c /petsc/src/dm/impls/plex/plexsubmesh.c /petsc/src/dm/impls/swarm/data_bucket.c /petsc/src/dm/impls/swarm/data_bucket.h /petsc/src/dm/impls/swarm/data_ex.c /petsc/src/dm/impls/swarm/data_ex.h /petsc/src/dm/impls/swarm/swarm.c /petsc/src/dm/impls/swarm/swarm_migrate.c /petsc/src/dm/impls/swarm/swarmpic.c /petsc/src/dm/impls/swarm/swarmpic_da.c /petsc/src/dm/impls/swarm/swarmpic_plex.c /petsc/src/dm/impls/swarm/swarmpic_sort.c /petsc/src/dm/impls/swarm/swarmpic_view.c /petsc/src/docs/tex/petsc.bib /petsc/src/docs/tex/petscapp.bib /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/ksp/utils/schurm.c /petsc/src/mat/examples/tests/ex167.c /petsc/src/mat/examples/tests/ex23.c /petsc/src/mat/examples/tests/ex87.c /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/mpi/mpiov.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/aij.h /petsc/src/mat/impls/baij/mpi/baijov.c /petsc/src/mat/impls/baij/seq/baij.c /petsc/src/mat/impls/baij/seq/baij.h /petsc/src/mat/impls/baij/seq/baij2.c /petsc/src/mat/impls/dummy/matdummy.c /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c /petsc/src/mat/interface/matrix.c /petsc/src/snes/examples/tutorials/ex48.c /petsc/src/snes/examples/tutorials/ex77.c /petsc/src/snes/examples/tutorials/makefile /petsc/src/snes/examples/tutorials/output/ex77_1.out /petsc/src/snes/examples/tutorials/output/ex77_2.out /petsc/src/sys/utils/makefile /petsc/src/sys/utils/matheq.c examples/tutorials/heat-data-assimulation.c /petsc/src/ts/adapt/interface/tsadapt.c /petsc/src/ts/examples/tutorials/ex11.c /petsc/src/ts/examples/tutorials/ex18.c /petsc/src/ts/examples/tutorials/output/ex16opt_p_1.out /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt_fd.c /petsc/src/ts/impls/implicit/theta/theta.c /petsc/src/ts/interface/ts.c /petsc/src/ts/trajectory/impls/basic/trajbasic.c /petsc/src/ts/trajectory/impls/memory/trajmemory.c /petsc/src/ts/trajectory/impls/visualization/trajvisualization.c /petsc/src/ts/trajectory/interface/makefile
aaa6c58d	01-Aug-2017	Lisandro Dalcin <dalcinl@gmail.com>	TS: Deprecate TSSetInitialTimeStep() /petsc/.gitmessage /petsc/bin/maint/branches.py /petsc/bin/maint/builddist /petsc/bin/maint/buildtest /petsc/bin/maint/confignightly/el6 /petsc/bin/maint/exampleslog.py /petsc/bin/maint/htmltemplate.py /petsc/bin/maint/runhtml.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/SuiteSparse.py /petsc/config/BuildSystem/config/packages/Trilinos.py /petsc/config/BuildSystem/config/packages/eigen.py /petsc/config/BuildSystem/config/packages/exodusii.py /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/BuildSystem/config/packages/sowing.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/options/languages.py /petsc/config/example_template.py /petsc/config/examples/arch-c-exodus-dbg-builder.py 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/petsc/src/vec/is/examples/tests/makefile /petsc/src/vec/is/is/impls/f90-custom/makefile /petsc/src/vec/is/is/interface/f90-custom/makefile /petsc/src/vec/is/is/utils/f90-custom/makefile /petsc/src/vec/is/utils/f90-custom/makefile /petsc/src/vec/is/utils/isltog.c /petsc/src/vec/vec/examples/tests/makefile /petsc/src/vec/vec/examples/tutorials/makefile /petsc/src/vec/vec/impls/mpi/pdvec.c /petsc/src/vec/vec/impls/seq/bvec2.c /petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu /petsc/src/vec/vec/impls/seq/seqcusp/veccusp2.cu /petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx /petsc/src/vec/vec/interface/dlregisvec.c /petsc/src/vec/vec/interface/f90-custom/makefile /petsc/src/vec/vec/utils/comb.c /petsc/src/vec/vec/utils/f90-custom/makefile /petsc/src/vec/vec/utils/makefile /petsc/src/vec/vec/utils/vecglvis.c
b06009c8	14-Jul-2017	Barry Smith <bsmith@mcs.anl.gov>	Add test output file I forgot before Commit-type: bug-fix Reported-by: nightly tests /petsc/src/ksp/ksp/examples/tutorials/ex10.c /petsc/src/sys/classes/gll/examples/tutorials/makefile /petsc/src/sys/classes/gll/petscgll.c examples/tutorials/output/heat-data-assimulation_cn.out
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