Merge branch 'pefarrell/tao-set-riesz-map'
Merge branch 'barry/add-concurrencykit'
tao-handson: reformat html output files so that docsetdate doesn't process them
doc: add in tao handson.html from http://www.mcs.anl.gov/research/projects/tao/tutorials/atpesc/handson.html
initial locks with concurrencykit and OpenMPcleanup of many monitors that used nonthread safe constructors when no viewer passed incleanup of examples that generated unused variable messages when
initial locks with concurrencykit and OpenMPcleanup of many monitors that used nonthread safe constructors when no viewer passed incleanup of examples that generated unused variable messages when compiled with --with-log=0
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Allow the use of a custom H0 in LMVM/BLMVM.Set a matrix to use as the gradient norm in LMVM/BLMVM.
add boolean guards to check if tao default options have been changed
Set the options prefix correctly on tao->ksp and tao->linesearch.
add accessors to tao iteration counter, tao total iteration count
fixed missing CHKERRQ() detected by clang's --analyze
updated PETSc directory layout to match standard packaging strategiesinclude/petsc finclude,private,mpiunilib/petsc confbin/petsc*
remove extra petscfunctionreturn in lmvm
Merge branch 'tisaac/simplify-register-all'Removed the XXXRegisterAll() functions from the public interface. These should now only be handled by the package intialization functions.
simplify option object names
updated new XXXSetFromOptions_YYY() methods to take PetscOptionsObjectType
manual merge of conflict
mv include/finclude to include/petsc-finclude for namespacing in installs
tao: put PetscFinalize() in rosenbrock example.
convert some PetscMalloc() to PetscMalloc1()remove unneeded () in first argument to PetscMalloc/Calloc1()fixes for MATLAB examples
added toggle and getter for PCJacobiSetUseAbs()changed PCJacobiSetUseRowMax/Sum to SetType() and added a getterfixed some test output
PetscLogFlops() must always be passed as double from Fortran
Merge branch 'barry/fix-options-default'Conflicts: src/ksp/ksp/examples/tutorials/ex52.c
cleanup of use of PetscOptionsInt and friends including use of flag final argument
remove d0 and d300 from tao examples
tao->ksp_its is per iteration, tao->ksp_tot_its is per solve
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