History log of /petsc/src/tao/ (Results 826 – 850 of 1550)
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13b4627817-May-2018 Alp Dener <alp.dener@gmail.com>

New LMVM matrix added for a symmetric Broyden approx of Hessian diagonals


/petsc/include/petscmat.h
/petsc/src/ksp/ksp/utils/kspmatregi.c
/petsc/src/ksp/ksp/utils/lmvm/diagbrdn/diagbrdn.c
/petsc/src/ksp/ksp/utils/lmvm/diagbrdn/makefile
/petsc/src/ksp/ksp/utils/lmvm/lmvm.h
/petsc/src/ksp/ksp/utils/lmvm/symbrdn/symbrdn.c
unconstrained/impls/lmvm/lmvm.c
0c51296c17-May-2018 Alp Dener <alp.dener@gmail.com>

LMVM matrix changes propaged to TAO algorithms and test outputs updated


/petsc/include/petsctao.h
/petsc/src/ksp/ksp/utils/lmvm/badbrdn/badbrdn.c
/petsc/src/ksp/ksp/utils/lmvm/bfgs/bfgs.c
/petsc/src/ksp/ksp/utils/lmvm/brdn/brdn.c
/petsc/src/ksp/ksp/utils/lmvm/dfp/dfp.c
/petsc/src/ksp/ksp/utils/lmvm/lmvm.h
/petsc/src/ksp/ksp/utils/lmvm/lmvmimpl.c
/petsc/src/ksp/ksp/utils/lmvm/lmvmutils.c
/petsc/src/ksp/ksp/utils/lmvm/makefile
/petsc/src/ksp/ksp/utils/lmvm/sr1/sr1.c
/petsc/src/ksp/ksp/utils/lmvm/symbrdn/symbrdn.c
bound/examples/tutorials/output/jbearing2_10.out
bound/examples/tutorials/output/jbearing2_11.out
bound/examples/tutorials/output/jbearing2_12.out
bound/examples/tutorials/output/jbearing2_6.out
bound/examples/tutorials/output/jbearing2_7.out
bound/examples/tutorials/output/jbearing2_8.out
bound/examples/tutorials/output/jbearing2_9.out
bound/examples/tutorials/output/plate2_10.out
bound/examples/tutorials/output/plate2_11.out
bound/examples/tutorials/output/plate2_12.out
bound/examples/tutorials/output/plate2_13.out
bound/examples/tutorials/output/plate2_14.out
bound/examples/tutorials/output/plate2_15.out
bound/examples/tutorials/output/plate2_2.out
bound/examples/tutorials/output/plate2_6.out
examples/tutorials/ex3.c
examples/tutorials/output/ex3_guess_pod.out
pde_constrained/examples/tutorials/elliptic.c
pde_constrained/examples/tutorials/output/elliptic_1.out
pde_constrained/examples/tutorials/output/elliptic_2.out
pde_constrained/examples/tutorials/output/parabolic_1.out
pde_constrained/impls/lcl/lcl.c
unconstrained/examples/tutorials/output/burgers_spectral.out
unconstrained/examples/tutorials/output/burgers_spectral_2.out
unconstrained/examples/tutorials/output/eptorsion1_1.out
unconstrained/examples/tutorials/output/eptorsion1_2.out
unconstrained/examples/tutorials/output/eptorsion1_3.out
unconstrained/examples/tutorials/output/eptorsion2_1.out
unconstrained/examples/tutorials/output/eptorsion2f_1.out
unconstrained/examples/tutorials/output/eptorsion2f_2.out
unconstrained/examples/tutorials/output/minsurf1_1.out
unconstrained/examples/tutorials/output/minsurf1_3.out
unconstrained/examples/tutorials/output/minsurf1_4.out
unconstrained/examples/tutorials/output/minsurf1_5.out
unconstrained/examples/tutorials/output/minsurf1_6.out
unconstrained/examples/tutorials/output/minsurf1_7.out
unconstrained/examples/tutorials/output/minsurf1_8.out
unconstrained/examples/tutorials/output/minsurf1_9.out
unconstrained/examples/tutorials/output/minsurf2_1.out
unconstrained/examples/tutorials/output/minsurf2_2.out
unconstrained/examples/tutorials/output/rosenbrock1_10.out
unconstrained/examples/tutorials/output/rosenbrock1_2.out
unconstrained/examples/tutorials/output/rosenbrock1_3.out
unconstrained/examples/tutorials/output/rosenbrock1_5.out
unconstrained/examples/tutorials/output/rosenbrock1_6.out
unconstrained/examples/tutorials/output/rosenbrock1_7.out
unconstrained/examples/tutorials/output/rosenbrock1f_1.out
unconstrained/examples/tutorials/output/rosenbrock2_1.out
unconstrained/examples/tutorials/output/spectraladjointassimilation_1.out
unconstrained/examples/tutorials/output/spectraladjointassimilation_2.out
unconstrained/examples/tutorials/output/spectraladjointassimilation_cn.out
unconstrained/examples/tutorials/rosenbrock1.c
unconstrained/impls/nls/nls.c
unconstrained/impls/nls/nlsimpl.h
unconstrained/impls/ntl/ntl.c
unconstrained/impls/ntl/ntlimpl.h
unconstrained/impls/ntr/ntr.c
unconstrained/impls/ntr/ntrimpl.h
78e4361a14-May-2018 Alp Dener <alp.dener@gmail.com>

Name refactoring for LMVM matrices


/petsc/include/petscksp.h
/petsc/include/petscmat.h
/petsc/src/ksp/ksp/utils/kspmatregi.c
/petsc/src/ksp/ksp/utils/lmvm/badbrdn/badbrdn.c
/petsc/src/ksp/ksp/utils/lmvm/badbrdn/makefile
/petsc/src/ksp/ksp/utils/lmvm/bfgs/bfgs.c
/petsc/src/ksp/ksp/utils/lmvm/bfgs/makefile
/petsc/src/ksp/ksp/utils/lmvm/brdn/brdn.c
/petsc/src/ksp/ksp/utils/lmvm/brdn/makefile
/petsc/src/ksp/ksp/utils/lmvm/dfp/dfp.c
/petsc/src/ksp/ksp/utils/lmvm/dfp/makefile
/petsc/src/ksp/ksp/utils/lmvm/lmvm.c
/petsc/src/ksp/ksp/utils/lmvm/lmvm.h
/petsc/src/ksp/ksp/utils/lmvm/makefile
/petsc/src/ksp/ksp/utils/lmvm/sr1/makefile
/petsc/src/ksp/ksp/utils/lmvm/sr1/sr1.c
/petsc/src/ksp/ksp/utils/lmvm/symbrdn/makefile
/petsc/src/ksp/ksp/utils/lmvm/symbrdn/symbrdn.c
/petsc/src/ksp/pc/impls/lmvm/lmvmpc.c
bound/impls/blmvm/blmvm.c
pde_constrained/impls/lcl/lcl.c
unconstrained/impls/lmvm/lmvm.c
unconstrained/impls/nls/nls.c
unconstrained/impls/ntl/ntl.c
unconstrained/impls/ntr/ntr.c
unconstrained/impls/owlqn/owlqn.c
b2d8c57711-May-2018 Alp Dener <alp.dener@gmail.com>

BNK algorithms fixed up for the new LMVM matrix


/petsc/include/petscksp.h
/petsc/src/ksp/ksp/utils/lmvm/lbfgs/lbfgs.c
/petsc/src/ksp/ksp/utils/lmvm/lmvm.c
/petsc/src/ksp/ksp/utils/lmvm/lmvm.h
/petsc/src/ksp/pc/impls/lmvm/lmvmpc.c
bound/impls/blmvm/blmvm.c
bound/impls/blmvm/blmvm.h
bound/impls/bnk/bnk.c
bound/impls/bnk/bnk.h
unconstrained/impls/lmvm/lmvm.c
b9ac709209-May-2018 Alp Dener <alp.dener@gmail.com>

new PC type added around LMVM matrices


/petsc/include/petscpc.h
/petsc/include/petscpctypes.h
/petsc/src/ksp/ksp/utils/lmvm/lbfgs/lbfgs.c
/petsc/src/ksp/ksp/utils/lmvm/lmvm.c
/petsc/src/ksp/pc/impls/lmvm/lmvmpc.c
/petsc/src/ksp/pc/impls/lmvm/makefile
/petsc/src/ksp/pc/impls/makefile
/petsc/src/ksp/pc/interface/pcregis.c
/petsc/src/mat/impls/submat/submat.c
bound/impls/bnk/bnk.c
bound/impls/bnk/bnk.h
cd929ea302-May-2018 Alp Dener <alp.dener@gmail.com>

derived LMVM types added and moved into the KSP package


/petsc/config/BuildSystem/config/compilers.py
/petsc/config/BuildSystem/config/framework.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/MOAB.py
/petsc/config/BuildSystem/config/packages/MPICH.py
/petsc/config/BuildSystem/config/packages/PTScotch.py
/petsc/config/BuildSystem/config/packages/hdf5.py
/petsc/config/BuildSystem/config/packages/petsc4py.py
/petsc/config/BuildSystem/config/packages/sowing.py
/petsc/config/PETSc/options/sharedLibraries.py
/petsc/include/petsc/private/dmforestimpl.h
/petsc/include/petsc/private/dmlabelimpl.h
/petsc/include/petsc/private/dmpleximpl.h
/petsc/include/petsc/private/hashmap.h
/petsc/include/petsc/private/hashmapi.h
/petsc/include/petsc/private/hashmapij.h
/petsc/include/petsc/private/hashset.h
/petsc/include/petsc/private/hashseti.h
/petsc/include/petsc/private/hashsetij.h
/petsc/include/petsc/private/hashtable.h
/petsc/include/petsc/private/kernels/khash.h
/petsc/include/petsc/private/logimpl.h
/petsc/include/petsc/private/makefile
/petsc/include/petsc/private/matimpl.h
/petsc/include/petsc/private/petscimpl.h
/petsc/include/petsc/private/taoimpl.h
/petsc/include/petsc/private/vecimpl.h
/petsc/include/petscdmtypes.h
/petsc/include/petscksp.h
/petsc/include/petsclog.h
/petsc/include/petscmat.h
/petsc/include/petscsys.h
/petsc/include/petscvec.h
/petsc/lib/petsc/bin/maint/buildtest
/petsc/lib/petsc/bin/maint/confignightly/cg2
/petsc/lib/petsc/bin/maint/confignightly/si
/petsc/lib/petsc/bin/maint/confignightly/si2
/petsc/lib/petsc/bin/maint/confignightly/si3
/petsc/lib/petsc/bin/maint/runhtml.py
/petsc/lib/petsc/bin/maint/startnightly
/petsc/lib/petsc/bin/petsclogformat.py
/petsc/lib/petsc/conf/test
/petsc/makefile
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/da/dainterp.c
/petsc/src/dm/impls/da/fdda.c
/petsc/src/dm/impls/forest/p4est/pforest.c
/petsc/src/dm/impls/network/network.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/plex/plexdistribute.c
/petsc/src/dm/impls/plex/plexfem.c
/petsc/src/dm/impls/plex/plexinterpolate.c
/petsc/src/dm/impls/plex/plexpartition.c
/petsc/src/dm/impls/swarm/swarm.c
/petsc/src/dm/interface/dlregisdmdm.c
/petsc/src/dm/label/dmlabel.c
/petsc/src/docs/manualpages-sec/header_Sensitivity
/petsc/src/docs/tex/manual/developers.tex
/petsc/src/docs/tex/manual/makefile
/petsc/src/docs/tex/manual/part1.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/linearsolvertable.html
/petsc/src/docs/website/download/index.html
/petsc/src/docs/website/index.html
/petsc/src/ksp/ksp/impls/bcgs/fbcgsr/fbcgsr.c
/petsc/src/ksp/ksp/impls/ibcgs/ibcgs.c
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/ksp/utils/kspmatregi.c
/petsc/src/ksp/ksp/utils/lmvm/lbfgs/lbfgs.c
/petsc/src/ksp/ksp/utils/lmvm/lbfgs/makefile
/petsc/src/ksp/ksp/utils/lmvm/lbrdn/lbrdn.c
/petsc/src/ksp/ksp/utils/lmvm/lbrdn/makefile
/petsc/src/ksp/ksp/utils/lmvm/ldfp/ldfp.c
/petsc/src/ksp/ksp/utils/lmvm/ldfp/makefile
/petsc/src/ksp/ksp/utils/lmvm/lmbrdn/lmbrdn.c
/petsc/src/ksp/ksp/utils/lmvm/lmbrdn/makefile
/petsc/src/ksp/ksp/utils/lmvm/lmvm.c
/petsc/src/ksp/ksp/utils/lmvm/lmvm.h
/petsc/src/ksp/ksp/utils/lmvm/lsbrdn/lsbrdn.c
/petsc/src/ksp/ksp/utils/lmvm/lsbrdn/makefile
/petsc/src/ksp/ksp/utils/lmvm/lsr1/lsr1.c
/petsc/src/ksp/ksp/utils/lmvm/lsr1/makefile
/petsc/src/ksp/ksp/utils/lmvm/makefile
/petsc/src/ksp/ksp/utils/makefile
/petsc/src/ksp/ksp/utils/schurm/makefile
/petsc/src/ksp/ksp/utils/schurm/schurm.c
/petsc/src/ksp/ksp/utils/schurm/schurm.h
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/is/nn/nn.c
/petsc/src/ksp/pc/impls/mg/mgfunc.c
/petsc/src/mat/examples/tests/ex104.c
/petsc/src/mat/examples/tests/ex183.c
/petsc/src/mat/examples/tests/ex184.c
/petsc/src/mat/examples/tests/ex219f.F90
/petsc/src/mat/examples/tests/ex49.c
/petsc/src/mat/examples/tests/ex58.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex219f_1.out
/petsc/src/mat/examples/tests/output/ex219f_2.out
/petsc/src/mat/examples/tests/output/ex49_r1.out
/petsc/src/mat/examples/tests/output/ex49_r1_par.out
/petsc/src/mat/examples/tutorials/ex15.c
/petsc/src/mat/examples/tutorials/output/ex15_3.out
/petsc/src/mat/examples/tutorials/output/ex15_4.out
/petsc/src/mat/examples/tutorials/output/ex15_4_alt.out
/petsc/src/mat/examples/tutorials/output/ex15_4_alt_1.out
/petsc/src/mat/examples/tutorials/output/ex15_4_alt_2.out
/petsc/src/mat/examples/tutorials/output/ex15_4_alt_3.out
/petsc/src/mat/impls/aij/mpi/fdmpiaij.c
/petsc/src/mat/impls/aij/mpi/mmaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpiov.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aijmkl/aijmkl.c
/petsc/src/mat/impls/aij/seq/aijperm/aijperm.c
/petsc/src/mat/impls/baij/mpi/baijov.c
/petsc/src/mat/impls/baij/mpi/mmbaij.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/aijbaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/elemental/matelem.cxx
/petsc/src/mat/impls/is/matis.c
/petsc/src/mat/impls/mffd/ftn-custom/zmffdf.c
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/mat/impls/preallocator/matpreallocator.c
/petsc/src/mat/impls/sbaij/mpi/mmsbaij.c
/petsc/src/mat/impls/sell/mpi/mmsell.c
/petsc/src/mat/impls/sell/seq/sell.c
/petsc/src/mat/impls/submat/submat.c
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/ftn-custom/zmatrixf.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/partition/impls/party/party.c
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/interface/noise/snesnoise.c
/petsc/src/snes/mf/makefile
/petsc/src/sys/classes/viewer/impls/draw/drawv.c
/petsc/src/sys/classes/viewer/interface/dlregispetsc.c
/petsc/src/sys/classes/viewer/interface/viewreg.c
/petsc/src/sys/examples/tests/ex40.c
/petsc/src/sys/examples/tests/ex41.c
/petsc/src/sys/examples/tests/ex42.c
/petsc/src/sys/examples/tests/ex43.c
/petsc/src/sys/examples/tests/output/ex40_1.out
/petsc/src/sys/examples/tests/output/ex41_1.out
/petsc/src/sys/examples/tests/output/ex42_1.out
/petsc/src/sys/examples/tests/output/ex43_1.out
/petsc/src/sys/logging/plog.c
/petsc/src/sys/logging/utils/eventlog.c
/petsc/src/sys/logging/utils/stagelog.c
/petsc/src/sys/logging/xmllogevent.c
/petsc/src/sys/objects/init.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/utils/str.c
bound/impls/blmvm/blmvm.c
bound/impls/blmvm/blmvm.h
bound/impls/bncg/bncg.c
bound/impls/bnk/bnk.c
bound/impls/bnk/bnk.h
interface/taosolver.c
interface/taosolver_bounds.c
matrix/makefile
pde_constrained/impls/lcl/lcl.c
unconstrained/examples/tutorials/rosenbrock2.c
unconstrained/impls/lmvm/lmvm.c
unconstrained/impls/lmvm/lmvm.h
unconstrained/impls/nls/nls.c
unconstrained/impls/ntl/ntl.c
unconstrained/impls/ntr/ntr.c
unconstrained/impls/owlqn/owlqn.c
/petsc/src/ts/examples/tutorials/ex21.c
/petsc/src/ts/examples/tutorials/output/ex21_1.out
/petsc/src/ts/f90-mod/petsctsmod.F
/petsc/src/ts/impls/explicit/rk/rk.c
/petsc/src/ts/interface/makefile
/petsc/src/ts/interface/sensitivity/makefile
/petsc/src/ts/interface/sensitivity/tssen.c
/petsc/src/vec/is/is/impls/general/general.c
/petsc/src/vec/is/is/utils/iscoloring.c
/petsc/src/vec/is/sf/interface/sf.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/is/utils/pmap.c
/petsc/src/vec/vec/examples/tutorials/ex21f90.F90
/petsc/src/vec/vec/examples/tutorials/ex43.c
/petsc/src/vec/vec/examples/tutorials/ex43f.F90
/petsc/src/vec/vec/examples/tutorials/makefile
/petsc/src/vec/vec/examples/tutorials/output/ex43f_1.out
/petsc/src/vec/vec/interface/dlregisvec.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/comb.c
/petsc/src/vec/vec/utils/projection.c
/petsc/src/vec/vec/utils/vinv.c
/petsc/src/vec/vscat/impls/vscat.c
/petsc/src/vec/vscat/interface/vscreate.c
fa2bb9fe15-Jun-2018 Lisandro Dalcin <dalcinl@gmail.com>

Log: various fixes and cleanups

- Reorganize declarations in petsclog.h
- Better -log_exclude, now applies to all registered stages
- Minor fixes to implementation of -info_exclude
- PCASM: Log appl

Log: various fixes and cleanups

- Reorganize declarations in petsclog.h
- Better -log_exclude, now applies to all registered stages
- Minor fixes to implementation of -info_exclude
- PCASM: Log apply-on-blocks KSP solves
- Rename PetscLogDestroy() -> PetscLogFinalize() and hide it from the API

show more ...


/petsc/config/BuildSystem/config/compilers.py
/petsc/config/BuildSystem/config/framework.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/MOAB.py
/petsc/config/BuildSystem/config/packages/MPICH.py
/petsc/config/BuildSystem/config/packages/PTScotch.py
/petsc/config/BuildSystem/config/packages/hdf5.py
/petsc/config/BuildSystem/config/packages/petsc4py.py
/petsc/config/BuildSystem/config/packages/sowing.py
/petsc/config/PETSc/options/sharedLibraries.py
/petsc/include/petsc/private/dmforestimpl.h
/petsc/include/petsc/private/dmlabelimpl.h
/petsc/include/petsc/private/dmpleximpl.h
/petsc/include/petsc/private/hashmap.h
/petsc/include/petsc/private/hashmapi.h
/petsc/include/petsc/private/hashmapij.h
/petsc/include/petsc/private/hashset.h
/petsc/include/petsc/private/hashseti.h
/petsc/include/petsc/private/hashsetij.h
/petsc/include/petsc/private/hashtable.h
/petsc/include/petsc/private/kernels/khash.h
/petsc/include/petsc/private/logimpl.h
/petsc/include/petsc/private/makefile
/petsc/include/petsc/private/matimpl.h
/petsc/include/petsc/private/petscimpl.h
/petsc/include/petsc/private/vecimpl.h
/petsc/include/petscdmtypes.h
/petsc/include/petsclog.h
/petsc/include/petscmat.h
/petsc/include/petscsys.h
/petsc/include/petscvec.h
/petsc/lib/petsc/bin/maint/buildtest
/petsc/lib/petsc/bin/maint/confignightly/cg2
/petsc/lib/petsc/bin/maint/confignightly/si
/petsc/lib/petsc/bin/maint/confignightly/si2
/petsc/lib/petsc/bin/maint/confignightly/si3
/petsc/lib/petsc/bin/maint/runhtml.py
/petsc/lib/petsc/bin/maint/startnightly
/petsc/lib/petsc/bin/petsclogformat.py
/petsc/lib/petsc/conf/test
/petsc/makefile
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/da/dainterp.c
/petsc/src/dm/impls/da/fdda.c
/petsc/src/dm/impls/forest/p4est/petsc_p4est_package.c
/petsc/src/dm/impls/forest/p4est/pforest.c
/petsc/src/dm/impls/network/network.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/plex/plexdistribute.c
/petsc/src/dm/impls/plex/plexfem.c
/petsc/src/dm/impls/plex/plexinterpolate.c
/petsc/src/dm/impls/plex/plexpartition.c
/petsc/src/dm/impls/swarm/swarm.c
/petsc/src/dm/interface/dlregisdmdm.c
/petsc/src/dm/label/dmlabel.c
/petsc/src/docs/manualpages-sec/header_Sensitivity
/petsc/src/docs/tex/manual/developers.tex
/petsc/src/docs/tex/manual/makefile
/petsc/src/docs/tex/manual/part1.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/linearsolvertable.html
/petsc/src/docs/website/download/index.html
/petsc/src/docs/website/index.html
/petsc/src/ksp/ksp/impls/bcgs/fbcgsr/fbcgsr.c
/petsc/src/ksp/ksp/impls/gmres/agmres/agmres.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/impls/ibcgs/ibcgs.c
/petsc/src/ksp/ksp/interface/dlregisksp.c
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/pc/impls/asm/asm.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/is/nn/nn.c
/petsc/src/ksp/pc/impls/mg/mgfunc.c
/petsc/src/mat/examples/tests/ex104.c
/petsc/src/mat/examples/tests/ex183.c
/petsc/src/mat/examples/tests/ex184.c
/petsc/src/mat/examples/tests/ex219f.F90
/petsc/src/mat/examples/tests/ex49.c
/petsc/src/mat/examples/tests/ex58.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex219f_1.out
/petsc/src/mat/examples/tests/output/ex219f_2.out
/petsc/src/mat/examples/tests/output/ex49_r1.out
/petsc/src/mat/examples/tests/output/ex49_r1_par.out
/petsc/src/mat/examples/tutorials/ex15.c
/petsc/src/mat/examples/tutorials/output/ex15_3.out
/petsc/src/mat/examples/tutorials/output/ex15_4.out
/petsc/src/mat/examples/tutorials/output/ex15_4_alt.out
/petsc/src/mat/examples/tutorials/output/ex15_4_alt_1.out
/petsc/src/mat/examples/tutorials/output/ex15_4_alt_2.out
/petsc/src/mat/examples/tutorials/output/ex15_4_alt_3.out
/petsc/src/mat/impls/aij/mpi/fdmpiaij.c
/petsc/src/mat/impls/aij/mpi/mmaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpiov.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aijmkl/aijmkl.c
/petsc/src/mat/impls/aij/seq/aijperm/aijperm.c
/petsc/src/mat/impls/baij/mpi/baijov.c
/petsc/src/mat/impls/baij/mpi/mmbaij.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/aijbaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/elemental/matelem.cxx
/petsc/src/mat/impls/is/matis.c
/petsc/src/mat/impls/mffd/ftn-custom/zmffdf.c
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/mat/impls/preallocator/matpreallocator.c
/petsc/src/mat/impls/sbaij/mpi/mmsbaij.c
/petsc/src/mat/impls/sell/mpi/mmsell.c
/petsc/src/mat/impls/sell/seq/sell.c
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/ftn-custom/zmatrixf.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/partition/impls/party/party.c
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/fas/fasfunc.c
/petsc/src/snes/interface/dlregissnes.c
/petsc/src/snes/interface/noise/snesnoise.c
/petsc/src/sys/classes/draw/interface/draw.c
/petsc/src/sys/classes/random/interface/dlregisrand.c
/petsc/src/sys/classes/viewer/impls/draw/drawv.c
/petsc/src/sys/classes/viewer/interface/dlregispetsc.c
/petsc/src/sys/classes/viewer/interface/view.c
/petsc/src/sys/classes/viewer/interface/viewreg.c
/petsc/src/sys/examples/tests/ex40.c
/petsc/src/sys/examples/tests/ex41.c
/petsc/src/sys/examples/tests/ex42.c
/petsc/src/sys/examples/tests/ex43.c
/petsc/src/sys/examples/tests/output/ex40_1.out
/petsc/src/sys/examples/tests/output/ex41_1.out
/petsc/src/sys/examples/tests/output/ex42_1.out
/petsc/src/sys/examples/tests/output/ex43_1.out
/petsc/src/sys/info/verboseinfo.c
/petsc/src/sys/logging/ftn-custom/zplogf.c
/petsc/src/sys/logging/plog.c
/petsc/src/sys/logging/utils/eventlog.c
/petsc/src/sys/logging/utils/stagelog.c
/petsc/src/sys/logging/xmllogevent.c
/petsc/src/sys/objects/init.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/utils/str.c
interface/dlregistao.c
/petsc/src/ts/characteristic/interface/slregis.c
/petsc/src/ts/examples/tutorials/ex21.c
/petsc/src/ts/examples/tutorials/output/ex21_1.out
/petsc/src/ts/f90-mod/petsctsmod.F
/petsc/src/ts/impls/explicit/rk/rk.c
/petsc/src/ts/interface/dlregists.c
/petsc/src/ts/interface/makefile
/petsc/src/ts/interface/sensitivity/makefile
/petsc/src/ts/interface/sensitivity/tssen.c
/petsc/src/ts/trajectory/impls/memory/trajmemory.c
/petsc/src/vec/is/ao/interface/dlregisdm.c
/petsc/src/vec/is/is/impls/general/general.c
/petsc/src/vec/is/is/utils/iscoloring.c
/petsc/src/vec/is/sf/interface/dlregissf.c
/petsc/src/vec/is/sf/interface/sf.c
/petsc/src/vec/is/utils/isltog.c
/petsc/src/vec/is/utils/pmap.c
/petsc/src/vec/pf/interface/pf.c
/petsc/src/vec/vec/examples/tutorials/ex21f90.F90
/petsc/src/vec/vec/examples/tutorials/ex43.c
/petsc/src/vec/vec/examples/tutorials/ex43f.F90
/petsc/src/vec/vec/examples/tutorials/makefile
/petsc/src/vec/vec/examples/tutorials/output/ex43f_1.out
/petsc/src/vec/vec/interface/dlregisvec.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/comb.c
/petsc/src/vec/vec/utils/vinv.c
/petsc/src/vec/vscat/impls/vscat.c
/petsc/src/vec/vscat/interface/dlregisvecscat.c
/petsc/src/vec/vscat/interface/vscreate.c
87aa24fb30-May-2018 Satish Balay <balay@mcs.anl.gov>

Merge remote-tracking branch 'origin/tmunson/tao-pounders-matlab-interface'


/petsc/config/BuildSystem/config/packages/BlasLapack.py
/petsc/config/BuildSystem/config/packages/Matlab.py
/petsc/config/BuildSystem/config/packages/fftw.py
/petsc/config/PETSc/Configure.py
/petsc/config/configure.py
/petsc/config/gmakegentest.py
/petsc/config/install.py
/petsc/include/petsc/mpiuni/mpif.h
/petsc/include/petscversion.h
/petsc/lib/petsc/bin/maint/builddist
/petsc/lib/petsc/bin/maint/runhtml.py
/petsc/makefile
/petsc/share/petsc/matlab/makefile
/petsc/src/dm/dt/examples/tests/ex3.c
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/examples/tests/makefile
/petsc/src/dm/impls/moab/makefile
/petsc/src/dm/impls/plex/plexadapt.c
/petsc/src/dm/impls/plex/plexpartition.c
/petsc/src/dm/impls/swarm/data_bucket.c
/petsc/src/dm/impls/swarm/data_ex.h
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmregall.c
/petsc/src/dm/label/dmlabel.c
/petsc/src/docs/manualpages-sec/header_DMMOAB
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/index.html
/petsc/src/docs/website/download/index.html
/petsc/src/ksp/ksp/impls/cg/cgtype.c
/petsc/src/ksp/ksp/impls/cg/gltr/gltr.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aijmkl/aijmkl.c
/petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c
/petsc/src/snes/examples/tutorials/ex13.c
/petsc/src/snes/examples/tutorials/ex62.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/utils/dmadapt.c
/petsc/src/sys/classes/viewer/impls/socket/matlab/sclose.c
/petsc/src/sys/classes/viewer/impls/socket/matlab/sopen.c
/petsc/src/sys/classes/viewer/impls/socket/matlab/sread.c
/petsc/src/sys/classes/viewer/impls/socket/matlab/swrite.c
/petsc/src/sys/logging/examples/tutorials/ex1f.F90
leastsquares/examples/matlab/ProblemFinalize.m
leastsquares/examples/matlab/ProblemInitialize.m
leastsquares/examples/matlab/README
leastsquares/examples/matlab/TestingFinalize.m
leastsquares/examples/matlab/TestingInitialize.m
leastsquares/examples/matlab/TestingPlot.m
leastsquares/examples/matlab/makefile
leastsquares/examples/matlab/more_wild_probs/dfo.dat
leastsquares/examples/matlab/more_wild_probs/dfovec.m
leastsquares/examples/matlab/more_wild_probs/dfovec_wrap.m
leastsquares/examples/matlab/more_wild_probs/dfoxs.m
leastsquares/examples/matlab/more_wild_probs/perf_profile.m
leastsquares/examples/matlab/taopounders.c
leastsquares/impls/pounders/pounders.c
/petsc/src/ts/examples/tutorials/power_grid/ex3sa.c
/petsc/src/ts/examples/tutorials/power_grid/output/ex3sa_3.out
/petsc/src/ts/impls/explicit/rk/rk.c
/petsc/src/ts/interface/tssen.c
/petsc/src/vec/vec/interface/f90-custom/zvectorf90.c
/petsc/src/vec/vec/interface/rvector.c
481d91ae25-May-2018 Todd Munson <tmunson@mcs.anl.gov>

Remove matlab pounders related cruft that is not required. Document the
matlab code better and include an appropriate message in the help text.


leastsquares/examples/matlab/ProblemFinalize.m
leastsquares/examples/matlab/ProblemInitialize.m
leastsquares/examples/matlab/TestingFinalize.m
leastsquares/examples/matlab/TestingInitialize.m
leastsquares/examples/matlab/TestingPlot.m
leastsquares/examples/matlab/more_wild_probs/dfovec_wrap.m
leastsquares/examples/matlab/taopounders.c
f18eb5cd25-May-2018 Todd Munson <tmunson@mcs.anl.gov>

Fixed typo.


leastsquares/examples/matlab/makefile
73c0cbc125-May-2018 Todd Munson <tmunson@mcs.anl.gov>

Remove the inclusion of matlab in testing.


leastsquares/examples/makefile
b38a9dd025-May-2018 Todd Munson <tmunson@mcs.anl.gov>

Finalizing comments and the work for the test problems.


leastsquares/examples/matlab/README
leastsquares/examples/matlab/TestingInitialize.m
7b4d9c8424-May-2018 Todd Munson <tmunson@mcs.anl.gov>

Finished the testing and generation of plots. Some simple bug
fixes addressed.


leastsquares/examples/matlab/ProblemFinalize.m
leastsquares/examples/matlab/TestingFinalize.m
leastsquares/examples/matlab/TestingInitialize.m
leastsquares/examples/matlab/TestingPlot.m
leastsquares/impls/pounders/pounders.c
654cbf8524-May-2018 Todd Munson <tmunson@mcs.anl.gov>

Added list of known problems with the code.


leastsquares/examples/matlab/README
1d4272e824-May-2018 Todd Munson <tmunson@mcs.anl.gov>

Added a comment on ignoring the return from Tao.


leastsquares/examples/matlab/taopounders.c
74919a8c24-May-2018 Todd Munson <tmunson@mcs.anl.gov>

Finish with initial implementation of matlab interface to test TAO pounders.


leastsquares/examples/makefile
leastsquares/examples/matlab/ProblemInitialize.m
leastsquares/examples/matlab/makefile
leastsquares/examples/matlab/taopounders.c
16cd255d24-May-2018 Todd Munson <tmunson@mcs.anl.gov>

Working through the matlab interface for pounders testing.

Fixed pounders bug in view.


leastsquares/examples/matlab/ProblemFinalize.m
leastsquares/examples/matlab/ProblemInitialize.m
leastsquares/examples/matlab/TestingFinalize.m
leastsquares/examples/matlab/TestingInitialize.m
leastsquares/examples/matlab/regression_test.m
leastsquares/examples/matlab/taopounders.c
leastsquares/impls/pounders/pounders.c
dedfbcbe22-May-2018 Jed Brown <jed@jedbrown.org>

TaoLineSearchType: use const typedef like other PETSc types


/petsc/include/petsctaolinesearch.h
linesearch/interface/taolinesearch.c
b625d6c720-May-2018 Jed Brown <jed@jedbrown.org>

TaoType: use a const typedef like other PETSc types


/petsc/include/petsctao.h
bound/impls/blmvm/blmvm.c
interface/taosolver.c
378ae26820-May-2018 Jed Brown <jed@jedbrown.org>

Merge branch 'jed/mpiuni-include/maint' into maint [PR #946]

* jed/mpiuni-include/maint:
Include <petsc/mpiuni/mpi.h> instead of requiring extra -I on command-line


/petsc/config/BuildSystem/config/base.py
/petsc/config/BuildSystem/config/compilers.py
/petsc/config/BuildSystem/config/packages/cmake.py
/petsc/config/BuildSystem/config/packages/mkl_sparse.py
/petsc/config/BuildSystem/config/packages/mkl_sparse_optimize.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/BuildSystem/config/utilities/debuggers.py
/petsc/config/PETSc/options/sharedLibraries.py
/petsc/config/examples/arch-linux-gcc-cxx-avx2.py
/petsc/config/examples/arch-mswin-gnu.py
/petsc/include/petsc/private/f90impl.h
/petsc/include/petsc/private/fortranimpl.h
/petsc/include/petsc/private/logimpl.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/include/petscsys.h
/petsc/include/petsctao.h
/petsc/lib/petsc/bin/maint/confignightly/knl3
/petsc/lib/petsc/conf/rules
/petsc/share/petsc/xml/performance_xml2html.xsl
/petsc/src/benchmarks/streams/MPIVersion.c
/petsc/src/dm/examples/tests/ex42.c
/petsc/src/dm/impls/composite/f90-custom/zfddaf90.c
/petsc/src/dm/impls/da/f90-custom/zda1f90.c
/petsc/src/ksp/ksp/examples/tutorials/ex51.c
/petsc/src/ksp/ksp/impls/rich/rich.c
/petsc/src/mat/utils/getcolv.c
/petsc/src/snes/examples/tutorials/ex5f.F90
/petsc/src/snes/interface/ftn-custom/zsnesf.c
/petsc/src/sys/classes/draw/impls/x/xcolor.c
/petsc/src/sys/error/ftn-custom/zerrf.c
/petsc/src/sys/logging/examples/tutorials/ex1f.F90
/petsc/src/sys/logging/examples/tutorials/makefile
/petsc/src/sys/logging/plog.c
/petsc/src/sys/logging/xmllogevent.c
/petsc/src/sys/logging/xmlviewer.h
/petsc/src/sys/mpiuni/mpi.c
/petsc/src/sys/objects/destroy.c
/petsc/src/sys/objects/init.c
/petsc/src/sys/utils/ftn-custom/zstrf.c
leastsquares/examples/tutorials/chwirut2.c
/petsc/src/ts/interface/ftn-custom/ztsf.c
/petsc/src/vec/vec/impls/mpi/pbvec.c
e729222f20-May-2018 Satish Balay <balay@mcs.anl.gov>

Merge remote-tracking branch 'origin/jed/mpiuni-include/maint'


/petsc/config/BuildSystem/config/base.py
/petsc/config/BuildSystem/config/compilers.py
/petsc/config/BuildSystem/config/packages/MPI.py
/petsc/config/BuildSystem/config/packages/cmake.py
/petsc/config/BuildSystem/config/packages/make.py
/petsc/config/BuildSystem/config/packages/mkl_sparse.py
/petsc/config/BuildSystem/config/packages/mkl_sparse_optimize.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/BuildSystem/config/utilities/debuggers.py
/petsc/config/PETSc/options/sharedLibraries.py
/petsc/config/examples/arch-linux-gcc-cxx-avx2.py
/petsc/config/examples/arch-mswin-gnu.py
/petsc/gmakefile
/petsc/include/petsc/finclude/petscsys.h
/petsc/include/petsc/private/f90impl.h
/petsc/include/petsc/private/fortranimpl.h
/petsc/include/petsc/private/logimpl.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/include/petscsys.h
/petsc/include/petsctao.h
/petsc/include/petscts.h
/petsc/lib/petsc/bin/maint/confignightly/knl3
/petsc/lib/petsc/conf/rules
/petsc/makefile
/petsc/share/petsc/xml/performance_xml2html.xsl
/petsc/src/benchmarks/streams/MPIVersion.c
/petsc/src/dm/examples/tests/ex42.c
/petsc/src/dm/impls/composite/f90-custom/zfddaf90.c
/petsc/src/dm/impls/da/f90-custom/zda1f90.c
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/ksp/ksp/examples/tutorials/ex42.c
/petsc/src/ksp/ksp/examples/tutorials/ex51.c
/petsc/src/ksp/ksp/impls/rich/rich.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aijmkl/aijmkl.c
/petsc/src/mat/impls/baij/mpi/baijmkl/mpibaijmkl.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/baij/seq/baijfact.c
/petsc/src/mat/impls/baij/seq/baijmkl/baijmkl.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/utils/getcolv.c
/petsc/src/snes/examples/tutorials/ex5f.F90
/petsc/src/snes/interface/ftn-custom/zsnesf.c
/petsc/src/sys/classes/draw/impls/x/xcolor.c
/petsc/src/sys/error/ftn-custom/zerrf.c
/petsc/src/sys/f90-mod/petscsys.h
/petsc/src/sys/f90-mod/petscsysmod.F
/petsc/src/sys/logging/examples/tutorials/ex1f.F90
/petsc/src/sys/logging/examples/tutorials/makefile
/petsc/src/sys/logging/plog.c
/petsc/src/sys/logging/xmllogevent.c
/petsc/src/sys/logging/xmlviewer.h
/petsc/src/sys/mpiuni/f90-mod/mpiunimod.F
/petsc/src/sys/mpiuni/fsrc/somempifort.F
/petsc/src/sys/mpiuni/mpi.c
/petsc/src/sys/objects/destroy.c
/petsc/src/sys/objects/init.c
/petsc/src/sys/utils/ftn-custom/zstrf.c
leastsquares/examples/tutorials/chwirut2.c
/petsc/src/ts/interface/ftn-custom/ztsf.c
/petsc/src/ts/trajectory/interface/traj.c
/petsc/src/vec/vec/impls/mpi/pbvec.c
0e062f7d10-May-2018 Todd Munson <tmunson@mcs.anl.gov>

Working on the code some more.


leastsquares/examples/matlab/taopounders.c
22c6c8e310-May-2018 Todd Munson <tmunson@mcs.anl.gov>

Making matlab mex files compile (need main to be defined with matlab 2018a,
clang, and configured --with-mpi=0)

Create correct makefile for pounders testing.


/petsc/src/sys/classes/viewer/impls/socket/matlab/sclose.c
/petsc/src/sys/classes/viewer/impls/socket/matlab/sopen.c
/petsc/src/sys/classes/viewer/impls/socket/matlab/sread.c
/petsc/src/sys/classes/viewer/impls/socket/matlab/swrite.c
leastsquares/examples/matlab/makefile
leastsquares/examples/matlab/regression_test.m
leastsquares/examples/matlab/taopounders.c
529ccf6409-May-2018 Todd Munson <tmunson@mcs.anl.gov>

Updating tests.


leastsquares/examples/matlab/regression_test.m
leastsquares/examples/matlab/taopounders.c
36f3894709-May-2018 Todd Munson <tmunson@mcs.anl.gov>

Merge branch 'tmunson/tao-pounders-matlab-interface' of https://bitbucket.org/petsc/petsc into tmunson/tao-pounders-matlab-interface


leastsquares/examples/matlab/more_wild_probs/calfun.m
leastsquares/examples/matlab/more_wild_probs/data_profile.m
leastsquares/examples/matlab/more_wild_probs/dfo.dat
leastsquares/examples/matlab/more_wild_probs/dfomn.m
leastsquares/examples/matlab/more_wild_probs/dfovec.m
leastsquares/examples/matlab/more_wild_probs/dfovec_wrap.m
leastsquares/examples/matlab/more_wild_probs/dfoxs.m
leastsquares/examples/matlab/more_wild_probs/perf_profile.m
leastsquares/examples/matlab/regression_test.m

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