Remove many PetscCheckFalse() from tsCommit-type: style-fix/spend 1hThanks-to: Jose E. Roman <jroman@dsic.upv.es>
doc: more fixes to remove build warnings
doc: fix References: sectionNotation:. * - textor. year - text
rename PetscAssert() -> PetscCheck() and PetscAssertDebug() -> PetscAssert()
add PetscAssert() and PetscAssertFalse()
make PetscInfo() variadic
SETERRQ[1-9]+ begone
Fix manpages: Input/Output Parameter --> Parameters
Remove all double blank lines from sourceCommit-type: petsc-style/2h
Add TSARKIMEXTestMassIdentity() that is used in debug mode to check the use of ARKIMEX fora non-trivial mass matrix when an explicit stage is usedCommit-type: error-checking/spend 1hReported-by:
Add TSARKIMEXTestMassIdentity() that is used in debug mode to check the use of ARKIMEX fora non-trivial mass matrix when an explicit stage is usedCommit-type: error-checking/spend 1hReported-by: Brad Aagaard <baagaard@usgs.gov>Reported-by: Matthew Knepley <knepley@gmail.com>Reported-by: Ed Bueler <elbueler@alaska.edu>Thanks-to: Jed Brown <jed@jedbrown.org>
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Fix warnings in NVIDIA compilers (formerly PGI): unreachable statement
Turn on checkbadSource test to generate an error when found; fix all source code that causes errorsCommit-type: portability-fix, testing-fix, style-fix, feature, maintainability/spend 1.5h
docs: fix Input/Output Parameters list formatReported-by: Pierre Jolivet <pierre.jolivet@enseeiht.fr>
Remove usage of PETSC_HAVE_FORTRAN_STDCALL, PETSC_BLASLAPACK_STDCALL, HAVE_FORTRAN_MIXED_STR_ARG flags - as Compaq f90 compiler is no longer supported
TSARKIMEX: add getter for fully implicit flagUpdate test outputs
Non-numeric optimizations focused on AIJ, MatFDColoring, and DMCreateMatrix_DA_*AIJ, looking to improve performance in GPU environments1) PetscCalloc*() now uses system calloc()2) Merged some Pets
Non-numeric optimizations focused on AIJ, MatFDColoring, and DMCreateMatrix_DA_*AIJ, looking to improve performance in GPU environments1) PetscCalloc*() now uses system calloc()2) Merged some PetscMalloc*()3) Eliminated unneeded PetscCalloc*()4) Removed some memory allocations and copies in MatFDColoringSetUp(), added local variables for better compiler optimization5) Added MatSetValues_SeqAIJ_SortedFull(), added MatSetOption(MAT_SORTED_FULL)6) Optimized DMCreateMatrix_DA_*AIJ for nonperiodic case to automatically have sorted columns (faster MatSetValues() times)7) Eliminated call to PetscMemzero() in PetscFree()Commit-type: style-fix, feature
Add PetscArraycmp(), PetscArraycpy(), PetscArrayzero(), PetscArraymove(), update code to use new formsReplace a couple multi-mallocs with a single mallocReplace backwards loops in MatSetValues_*()
Add PetscArraycmp(), PetscArraycpy(), PetscArrayzero(), PetscArraymove(), update code to use new formsReplace a couple multi-mallocs with a single mallocReplace backwards loops in MatSetValues_*() with PetscArraymove()Commit-type: style-fix, feature
Man pages: remove .keywords: fieldsThis field is recognized by doctext from Sowing (http://wgropp.cs.illinois.edu/projects/software/sowing/doctext/node20.htm#Node20),but it doesn't seem to be unif
Man pages: remove .keywords: fieldsThis field is recognized by doctext from Sowing (http://wgropp.cs.illinois.edu/projects/software/sowing/doctext/node20.htm#Node20),but it doesn't seem to be uniformly used or maintained.Thus, remove all .keywords: fields, and a following blank line, if present.This is accomplished with GNU sed (gsed on OS X), with the following commands.*Warning* that this type of command can corrupt a .git directory,so be cautious in reusing or modifying these commands. They first lookfor and delete matching lines with a following line consisting of only whitespace,and then delete any remaining matching lines. find src/ -type f -exec gsed -i '/keywords:/ {N; /\n\s*$/d}' {} + find src/ -type f -exec gsed -i '/keywords:/d' {} + find include/ -type f -exec gsed -i '/keywords:/ {N; /\n\s*$/d}' {} + find include/ -type f -exec gsed -i '/keywords:/d' {} +Hints on the sed command obtained from: https://unix.stackexchange.com/questions/100754/how-to-delete-a-specific-line-and-the-following-blank-line-using-gnu-sed
Fixed out-dated URLS using make checkbadURLS REPLACE=1One manual fix of https://en.wikipedia.org/wiki/Buckingham_π_theorem since the automatic tool dropped the first _ for some reasonManual fix of
Fixed out-dated URLS using make checkbadURLS REPLACE=1One manual fix of https://en.wikipedia.org/wiki/Buckingham_π_theorem since the automatic tool dropped the first _ for some reasonManual fix of //faq.html since the automatic tool incorrectly replaced /faq.html to //faq.html in some locationsThese are largely updates of http to https but have a variety of other website location changesOnce this branch is in master individual developers can run make checkbadURLS and fix URLs related to their projects manuallyCommit-type: bug-fix, documentation
Fixes for begining of users manual and a variety of webpages including manual pagesCommit-type: bug-fix, documentation
Add if (*ierr) return checks for all Fortran stubs that utilize FREECHAR()Otherwise the ierr is overwritten by the FREECHAR() thus returning a zero error code when it should notCommit-type: bug-f
Add if (*ierr) return checks for all Fortran stubs that utilize FREECHAR()Otherwise the ierr is overwritten by the FREECHAR() thus returning a zero error code when it should notCommit-type: bug-fixReported-by: Tim Steinhoff <kandanovian@gmail.com>
Remove memory leaks of XXXRegister() is called but XXX object is never usedThis means adding YYYInitialPackage() at the beginning of XXXRegister() routinesMinor fixes of missing prototypesCommi
Remove memory leaks of XXXRegister() is called but XXX object is never usedThis means adding YYYInitialPackage() at the beginning of XXXRegister() routinesMinor fixes of missing prototypesCommit-type: style-fixReported-by: Jed Brown <jed@jedbrown.org>Thanks-to: Fande Kong <fande.kong@inl.gov>
Fix for PetscFormatRealArray() due to updates to PetscVSNPrintf()Also removed duplicate copies of PetscFormatRealArray()Commit-type: bug-fixReported-by: nightly tests
Merge remote-tracking branch 'origin/jed/variadic-malloc'
Fixes for use of PetscMallocN() with const type inputMicrosoft compilers warn about incompatiblity between pointers passed to new PetscMallocA() functionCommit-type: portability-fix, testing-fix
Fixes for use of PetscMallocN() with const type inputMicrosoft compilers warn about incompatiblity between pointers passed to new PetscMallocA() functionCommit-type: portability-fix, testing-fixReported-by: nightly tests
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