History log of /petsc/src/vec/ (Results 1901 – 1925 of 6950)
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553225e214-Mar-2019 Satish Balay <balay@mcs.anl.gov>

Merge remote-tracking branch 'origin/jczhang/vecscat-in-sf' [PR #1396]


/petsc/config/BuildSystem/config/packages/MFEM.py
/petsc/config/BuildSystem/config/packages/petsc4py.py
/petsc/include/petsc/private/dmimpl.h
/petsc/include/petsc/private/dmpleximpl.h
/petsc/include/petsc/private/petscdsimpl.h
/petsc/include/petsc/private/sfimpl.h
/petsc/include/petsc/private/vecimpl.h
/petsc/include/petsc/private/vecscatterimpl.h
/petsc/include/petscdm.h
/petsc/include/petscsf.h
/petsc/include/petscsys.h
/petsc/include/petscvec.h
/petsc/src/dm/dt/interface/dtds.c
/petsc/src/dm/field/examples/tutorials/output/ex1_ds.out
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/plex/examples/tests/ex11.c
/petsc/src/dm/impls/plex/examples/tests/ex3.c
/petsc/src/dm/impls/plex/examples/tests/ex32.c
/petsc/src/dm/impls/plex/examples/tests/output/ex26_10.out
/petsc/src/dm/impls/plex/examples/tests/output/ex26_11.out
/petsc/src/dm/impls/plex/examples/tests/output/ex26_16.out
/petsc/src/dm/impls/plex/examples/tests/output/ex26_17.out
/petsc/src/dm/impls/plex/examples/tests/output/ex26_18.out
/petsc/src/dm/impls/plex/examples/tests/output/ex26_19.out
/petsc/src/dm/impls/plex/examples/tests/output/ex26_6.out
/petsc/src/dm/impls/plex/examples/tests/output/ex26_7.out
/petsc/src/dm/impls/plex/examples/tests/output/ex26_8.out
/petsc/src/dm/impls/plex/examples/tests/output/ex26_9.out
/petsc/src/dm/impls/plex/examples/tests/output/ex32_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex32_1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex32_2.out
/petsc/src/dm/impls/plex/examples/tests/output/ex32_3.out
/petsc/src/dm/impls/plex/examples/tests/output/ex32_4.out
/petsc/src/dm/impls/plex/examples/tests/output/ex32_5.out
/petsc/src/dm/impls/plex/examples/tests/output/ex32_6.out
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexdistribute.c
/petsc/src/dm/impls/plex/plexhdf5.c
/petsc/src/dm/impls/plex/plexpartition.c
/petsc/src/dm/impls/plex/plexpreallocate.c
/petsc/src/dm/impls/plex/plexreorder.c
/petsc/src/dm/impls/plex/plexsubmesh.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmget.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/ksp/ksp/examples/tests/ex11.c
/petsc/src/ksp/ksp/examples/tutorials/ex52f.F90
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/examples/tests/ex23.c
/petsc/src/mat/examples/tests/ex5.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/maij/maij.c
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/sell/mpi/mpisell.c
/petsc/src/mat/interface/matnull.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tutorials/ex62.c
/petsc/src/snes/examples/tutorials/ex69.c
/petsc/src/snes/examples/tutorials/output/ex56_0.out
/petsc/src/snes/impls/tr/tr.c
/petsc/src/snes/interface/snes.c
/petsc/src/sys/objects/aoptions.c
/petsc/src/sys/utils/sorti.c
/petsc/src/tao/interface/taosolver_fg.c
/petsc/src/tao/interface/taosolver_hj.c
/petsc/src/ts/event/tsevent.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/ex11_sa.c
/petsc/src/ts/examples/tutorials/ex18.c
/petsc/src/ts/interface/sensitivity/tssen.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/trajectory/interface/traj.c
is/sf/examples/tutorials/ex1.c
is/sf/examples/tutorials/output/ex1_bcastop_basic.out
is/sf/impls/basic/sfbasic.c
is/sf/impls/window/sfwindow.c
is/sf/interface/dlregissf.c
is/sf/interface/sf.c
is/sf/interface/sftype.c
vec/examples/tests/ex22.c
vec/interface/rvector.c
vec/interface/vector.c
vec/utils/vinv.c
vscat/impls/makefile
vscat/impls/mpi1/vpscat_mpi1.h
vscat/impls/sf/makefile
vscat/impls/sf/vscatsf.c
vscat/interface/dlregisvecscat.c
vscat/interface/vscatfce.c
85ea3df114-Mar-2019 Satish Balay <balay@mcs.anl.gov>

fix -Wunused-value warnings

4f59c0f713-Mar-2019 Stefano Zampini <stefano.zampini@gmail.com>

Merged in stefano_zampini/feature-pcbddc-enablelor (pull request #1427)

Stefano zampini/feature pcbddc enablelor


/petsc/config/BuildSystem/config/packages/MFEM.py
/petsc/include/petsc/private/dmpleximpl.h
/petsc/include/petsc/private/matimpl.h
/petsc/include/petsc/private/vecscatterimpl.h
/petsc/include/petscdm.h
/petsc/include/petscdmplex.h
/petsc/include/petscksp.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/include/petscsystypes.h
/petsc/include/petsctao.h
/petsc/lib/petsc/bin/maint/generateetags.py
/petsc/share/petsc/datafiles/meshes/gmsh-3d-ascii-32.msh
/petsc/share/petsc/datafiles/meshes/gmsh-3d-ascii-64.msh
/petsc/share/petsc/datafiles/meshes/gmsh-3d-ascii.msh2
/petsc/share/petsc/datafiles/meshes/gmsh-3d-ascii.msh4
/petsc/share/petsc/datafiles/meshes/gmsh-3d-binary-32.msh
/petsc/share/petsc/datafiles/meshes/gmsh-3d-binary-64.msh
/petsc/share/petsc/datafiles/meshes/gmsh-3d-binary.msh2
/petsc/share/petsc/datafiles/meshes/gmsh-3d-binary.msh4
/petsc/share/petsc/datafiles/meshes/gmsh-3d.geo
/petsc/src/dm/dt/fe/impls/basic/febasic.c
/petsc/src/dm/dt/interface/dtds.c
/petsc/src/dm/impls/forest/p4est/pforest.c
/petsc/src/dm/impls/plex/examples/tests/ex1.c
/petsc/src/dm/impls/plex/examples/tests/ex10.c
/petsc/src/dm/impls/plex/examples/tests/output/ex1_gmsh_3d_32.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_gmsh_3d_32_np2.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_gmsh_3d_64.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_gmsh_3d_64_np2.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_gmsh_3d_legacy.out
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/plex/plexgeometry.c
/petsc/src/dm/impls/plex/plexglvis.c
/petsc/src/dm/impls/plex/plexgmsh.c
/petsc/src/dm/impls/plex/plexpartition.c
/petsc/src/dm/impls/plex/plexproject.c
/petsc/src/dm/impls/plex/plexreorder.c
/petsc/src/dm/impls/plex/plexsection.c
/petsc/src/dm/impls/plex/plexsubmesh.c
/petsc/src/dm/impls/swarm/examples/tests/makefile
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmi.c
/petsc/src/docs/tao_tex/manual/part2.tex
/petsc/src/docs/tao_tex/manual/part2b.tex
/petsc/src/ksp/f90-mod/petsckspdefmod.F
/petsc/src/ksp/f90-mod/petsckspmod.F
/petsc/src/ksp/f90-mod/petscpcmod.F
/petsc/src/ksp/ksp/examples/tutorials/ex71.c
/petsc/src/ksp/ksp/examples/tutorials/ex73.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex43_6.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex49_hypre_nullspace.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex59_bddc_fetidp_approximate.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_3lev.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_4lev.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_both_approx.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_deluxe_layers.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_dir_approx.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_neu_approx.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_fetidp_elast.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex72_bddc_par_nd_parmetis.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex72_bddc_par_nd_ptscotch.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex73_basic_dirichlet.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex73_basic_neumann.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex73_mg_2lv_2mg.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex73_mg_3lv_2mg.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex73_mg_3lv_2mg_customcommsize.out
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddcgraph.c
/petsc/src/ksp/pc/impls/bddc/bddcnullspace.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.h
/petsc/src/ksp/pc/impls/bddc/bddcstructs.h
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/hypre/hypre.c
/petsc/src/ksp/pc/impls/is/pcis.c
/petsc/src/ksp/pc/impls/is/pcis.h
/petsc/src/ksp/pc/impls/ksp/pcksp.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/ksp/pc/impls/telescope/makefile
/petsc/src/ksp/pc/impls/telescope/telescope.c
/petsc/src/ksp/pc/impls/telescope/telescope.h
/petsc/src/ksp/pc/impls/telescope/telescope_coarsedm.c
/petsc/src/ksp/pc/impls/telescope/telescope_dmda.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/examples/tests/ex104.c
/petsc/src/mat/examples/tests/ex115.c
/petsc/src/mat/examples/tests/ex23.c
/petsc/src/mat/examples/tests/ex88.c
/petsc/src/mat/examples/tests/ex94.c
/petsc/src/mat/examples/tests/output/ex88_1.out
/petsc/src/mat/examples/tests/output/ex94_2.out
/petsc/src/mat/examples/tutorials/ex15.c
/petsc/src/mat/examples/tutorials/output/ex15_7.out
/petsc/src/mat/examples/tutorials/output/ex15_7_alt.out
/petsc/src/mat/impls/adj/mpi/mpiadj.c
/petsc/src/mat/impls/adj/mpi/mpiadj.h
/petsc/src/mat/impls/aij/mpi/mpiaij.h
/petsc/src/mat/impls/aij/mpi/mpiptap.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/mpi/mpidense.h
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/interface/matnull.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/partition/impls/hierarchical/hierarchical.c
/petsc/src/mat/partition/impls/pmetis/pmetis.c
/petsc/src/mat/partition/partition.c
/petsc/src/mat/utils/multequal.c
/petsc/src/snes/examples/tutorials/output/ex12_p4est_solve_bddc.out
/petsc/src/snes/examples/tutorials/output/ex12_p4est_solve_bddc_alt.out
/petsc/src/snes/examples/tutorials/output/ex12_p4est_solve_bddc_alt_2.out
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/sys/classes/viewer/impls/ascii/filev.c
/petsc/src/sys/fileio/sysio.c
/petsc/src/sys/objects/options.c
/petsc/src/sys/objects/ptype.c
/petsc/src/tao/interface/taosolver_hj.c
/petsc/src/tao/leastsquares/examples/tests/chwirut2.c
/petsc/src/tao/leastsquares/examples/tutorials/chwirut1.c
/petsc/src/tao/leastsquares/examples/tutorials/chwirut2.c
/petsc/src/tao/leastsquares/examples/tutorials/cs1.c
/petsc/src/tao/leastsquares/examples/tutorials/cs1Data_A_b_xGT
/petsc/src/tao/leastsquares/examples/tutorials/makefile
/petsc/src/tao/leastsquares/examples/tutorials/output/chwirut1_1.out
/petsc/src/tao/leastsquares/examples/tutorials/output/chwirut1_1_alt.out
/petsc/src/tao/leastsquares/examples/tutorials/output/chwirut1_2.out
/petsc/src/tao/leastsquares/examples/tutorials/output/chwirut1_3.out
/petsc/src/tao/leastsquares/examples/tutorials/output/cs1_1.out
/petsc/src/tao/leastsquares/examples/tutorials/output/cs1_2.out
/petsc/src/tao/leastsquares/examples/tutorials/output/cs1_3.out
/petsc/src/tao/leastsquares/examples/tutorials/output/tomography_1.out
/petsc/src/tao/leastsquares/examples/tutorials/output/tomography_2.out
/petsc/src/tao/leastsquares/examples/tutorials/output/tomography_3.out
/petsc/src/tao/leastsquares/examples/tutorials/tomography.c
/petsc/src/tao/leastsquares/examples/tutorials/tomographyData_A_b_xGT
/petsc/src/tao/leastsquares/examples/tutorials/tomographyGenerateData.m
/petsc/src/tao/leastsquares/impls/brgn/brgn.c
/petsc/src/tao/leastsquares/impls/brgn/brgn.h
/petsc/src/tao/leastsquares/impls/brgn/ftn-custom/zbrgnf.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex5.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/ex18.c
vec/examples/tests/ex29.c
vec/examples/tests/output/ex29_test_inv_error.out
vec/interface/rvector.c
8860a13412-Mar-2019 Junchao Zhang <jczhang@mcs.anl.gov>

Use new vector read-lock function names

The new one are VecLockReadPush, VecLockReadPop, VecSetErrorIfLocked

c5d578a912-Mar-2019 Junchao Zhang <jczhang@mcs.anl.gov>

Use new vector write-lock function names

38fecf7c11-Mar-2019 Junchao Zhang <jczhang@mcs.anl.gov>

Deprecate some vector lock functions

VecLockReadPush(x) - replaced VecLockPush(x)
VecLockReadPop(x) - replaced VecLockPop(x)
VecLockWriteSet_Private(x,flg) - new
VecSetError

Deprecate some vector lock functions

VecLockReadPush(x) - replaced VecLockPush(x)
VecLockReadPop(x) - replaced VecLockPop(x)
VecLockWriteSet_Private(x,flg) - new
VecSetErrorIfLocked(x,arg) - replaced VecLocked(x)

show more ...

4a8f558220-Feb-2019 Jed Brown <jed@jedbrown.org>

VecStashSortCompress_Private: fix initialization for blocked stash

Reported-by: Stefano_Zampini <stefano.zampini@gmail.com>

686f627a19-Feb-2019 Stefano Zampini <stefano.zampini@gmail.com>

Vec test ex29: added an example where BTS assembly fails

9cd9edce19-Feb-2019 Stefano Zampini <stefano.zampini@gmail.com>

VecSetValuesBlocked: return if ni == 0

Added few more logical checks to the interface


/petsc/config/BuildSystem/config/packages/MFEM.py
/petsc/include/petsc/private/vecscatterimpl.h
/petsc/src/dm/impls/plex/plexglvis.c
/petsc/src/docs/tex/manual/developers.tex
/petsc/src/ksp/ksp/examples/tutorials/ex71.c
/petsc/src/ksp/ksp/examples/tutorials/output/ex49_hypre_nullspace.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex59_bddc_fetidp_approximate.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_both_approx.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_deluxe_layers.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_dir_approx.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_neu_approx.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_fetidp_elast.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex72_bddc_par_nd_parmetis.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex72_bddc_par_nd_ptscotch.out
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddcgraph.c
/petsc/src/ksp/pc/impls/bddc/bddcnullspace.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.h
/petsc/src/ksp/pc/impls/bddc/bddcstructs.h
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gamg/geo.c
/petsc/src/ksp/pc/impls/hypre/hypre.c
/petsc/src/ksp/pc/impls/is/pcis.c
/petsc/src/ksp/pc/impls/is/pcis.h
/petsc/src/ksp/pc/impls/ksp/pcksp.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/ml/ml.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/interface/matnull.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/partition/partition.c
/petsc/src/snes/examples/tutorials/output/ex12_p4est_solve_bddc.out
/petsc/src/sys/objects/options.c
vec/interface/rvector.c
2978186309-Mar-2019 Junchao Zhang <jczhang@mcs.anl.gov>

Unlock vectors even with SCATTER_LOCAL

969fcafd09-Mar-2019 Junchao Zhang <jczhang@mcs.anl.gov>

Tiny style change

dacc641708-Mar-2019 Junchao Zhang <jczhang@mcs.anl.gov>

Fix bugs when x==y in vecscatter

14bbee9608-Mar-2019 Junchao Zhang <jczhang@mcs.anl.gov>

Lock vectors used in VecScatter_SF

e7d89bd208-Mar-2019 Junchao Zhang <jczhang@mcs.anl.gov>

Lock vectors used in VecScatter_MPI1

8e89e9e208-Mar-2019 Junchao Zhang <jczhang@mcs.anl.gov>

Add VecWriteLock/Unlock() to give exclusive access to a vector

534ea0e708-Mar-2019 Junchao Zhang <jczhang@mcs.anl.gov>

Do not error out if input a sequential vecscatter

Just return empty remote for sequential vecscatter

d2a2595307-Mar-2019 Junchao Zhang <jczhang@mcs.anl.gov>

Remove {} around SETERRQ

f2f9f16c07-Mar-2019 Junchao Zhang <jczhang@mcs.anl.gov>

Change const VecScatter argument to VecScatter

The const is useless since const does not go through typedef types, such as Mat, Vec, VecScatter etc.

5f96a03d22-Feb-2019 Junchao Zhang <jczhang@mcs.anl.gov>

Get rid of the y access in VecScatterBegin(x,y)

The access is expensive if y is on GPU or not petscnative

647a6db422-Feb-2019 Junchao Zhang <jczhang@mcs.anl.gov>

Always use const data as key to look up links in SF

With this modification, we can have a VecScatter implementation that in VecScatterBegin(..,x,y,..),
one only accesses the read-only vector x and d

Always use const data as key to look up links in SF

With this modification, we can have a VecScatter implementation that in VecScatterBegin(..,x,y,..),
one only accesses the read-only vector x and does not access y - the vector to write. Access to y is
pushed to VecScatterEnd(..,x,y,..).

The benefit is that we can get rid of VecGet/RestoreArray(y,..) in VecScatterBegin().
For vectors that are on GPU or not petsc native (e.g., VecNest), getting/restoring arrays are quite expensive.

In other words, we do lazy data access -- we only access data when we need it. This discussion also applies to PetscSFXxxBegin/End.

show more ...

10c40b4c14-Feb-2019 Junchao Zhang <jczhang@mcs.anl.gov>

Enable a few nontrival cpu & gpu tests for vecscat SF

0d72b76814-Feb-2019 Junchao Zhang <jczhang@mcs.anl.gov>

Clean up unused VecScatterIsSequential_Private

1d6fa9d814-Feb-2019 Junchao Zhang <jczhang@mcs.anl.gov>

Add CUDA support for VecScatter

0caea09a13-Feb-2019 Junchao Zhang <jczhang@mcs.anl.gov>

Clean up unused VecScatterGetTypes_Private

77b7e48d11-Feb-2019 Junchao Zhang <jczhang@mcs.anl.gov>

Handle MPI builtin types specially in SF to make the common case fast

We do not need complicated dup and compare logic for builtin types.
Note that VecScatter only has one type, MPIU_SCALAR.

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