History log of /petsc/src/vec/ (Results 2001 – 2025 of 6950)
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2a2054b917-Dec-2018 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

vec_vec_tests-ex48: test attribute querying (relative path)


/petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c
vec/examples/tests/ex48.c
vec/examples/tests/output/ex48_1.out
ecb828f317-Dec-2018 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

vec_vec_tests-ex48: test group/dataset existence queries


/petsc/include/petscviewerhdf5.h
/petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c
vec/examples/tests/ex48.c
vec/examples/tests/output/ex48_1.out
683f731413-Dec-2018 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

vec_vec_tests-ex48_1 tests HDF5 attribute I/O


/petsc/config/BuildSystem/config/packages/exodusii.py
/petsc/config/BuildSystem/config/packages/mkl_sparse_optimize.py
/petsc/config/BuildSystem/config/packages/petsc4py.py
/petsc/gmakefile
/petsc/include/petsc/private/dmpleximpl.h
/petsc/include/petsc/private/fortranimpl.h
/petsc/include/petsc/private/kspimpl.h
/petsc/include/petsc/private/petscdsimpl.h
/petsc/include/petscdmlabel.h
/petsc/include/petscdmplex.h
/petsc/include/petscds.h
/petsc/include/petscfe.h
/petsc/include/petscksp.h
/petsc/include/petscpc.h
/petsc/src/dm/dt/dualspace/impls/lagrange/dspacelagrange.c
/petsc/src/dm/dt/examples/tests/ex5.c
/petsc/src/dm/dt/examples/tests/output/ex5_0.out
/petsc/src/dm/dt/fe/interface/fe.c
/petsc/src/dm/dt/fe/interface/fegeom.c
/petsc/src/dm/dt/interface/dtds.c
/petsc/src/dm/dt/space/impls/poly/spacepoly.c
/petsc/src/dm/dt/space/impls/tensor/spacetensor.c
/petsc/src/dm/examples/tests/ex51.c
/petsc/src/dm/examples/tests/makefile
/petsc/src/dm/examples/tests/output/ex51_1.out
/petsc/src/dm/examples/tutorials/ex20.c
/petsc/src/dm/examples/tutorials/ex21.c
/petsc/src/dm/examples/tutorials/makefile
/petsc/src/dm/f90-mod/makefile
/petsc/src/dm/f90-mod/petscdmdamod.F
/petsc/src/dm/f90-mod/petscdmmod.F
/petsc/src/dm/f90-mod/petscdmplex.h90
/petsc/src/dm/field/examples/tutorials/ex1.c
/petsc/src/dm/field/examples/tutorials/output/ex1_ds.out
/petsc/src/dm/impls/plex/examples/tests/ex10.c
/petsc/src/dm/impls/plex/examples/tests/ex11.c
/petsc/src/dm/impls/plex/examples/tests/ex12.c
/petsc/src/dm/impls/plex/examples/tests/ex15.c
/petsc/src/dm/impls/plex/examples/tests/ex18.c
/petsc/src/dm/impls/plex/examples/tests/ex24.c
/petsc/src/dm/impls/plex/examples/tests/ex9.c
/petsc/src/dm/impls/plex/examples/tests/output/ex12_lb_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex12_lb_1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_part_parmetis_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_part_ptscotch_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_part_ptscotch_1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex24_3.out
/petsc/src/dm/impls/plex/examples/tutorials/ex1.c
/petsc/src/dm/impls/plex/examples/tutorials/ex1f90.F90
/petsc/src/dm/impls/plex/examples/tutorials/ex5.c
/petsc/src/dm/impls/plex/examples/tutorials/ex6.c
/petsc/src/dm/impls/plex/f90-custom/makefile
/petsc/src/dm/impls/plex/f90-custom/zplexf90.c
/petsc/src/dm/impls/plex/f90-custom/zplexsectionf90.c
/petsc/src/dm/impls/plex/makefile
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexpartition.c
/petsc/src/dm/impls/plex/plexsection.c
/petsc/src/dm/impls/stag/examples/tutorials/ex1.c
/petsc/src/dm/impls/stag/examples/tutorials/ex2.c
/petsc/src/dm/impls/stag/examples/tutorials/ex3.c
/petsc/src/dm/impls/stag/examples/tutorials/output/ex3_2.out
/petsc/src/dm/impls/stag/examples/tutorials/output/ex3_2_alt_4.out
/petsc/src/dm/interface/dm.c
/petsc/src/dm/label/dmlabel.c
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/f90-mod/makefile
/petsc/src/ksp/f90-mod/petscksp.h
/petsc/src/ksp/f90-mod/petsckspdefmod.F
/petsc/src/ksp/f90-mod/petsckspmod.F
/petsc/src/ksp/f90-mod/petscpcmod.F
/petsc/src/ksp/ksp/examples/tests/ex51.c
/petsc/src/ksp/ksp/examples/tests/ex52f.F
/petsc/src/ksp/ksp/examples/tests/output/ex3_chebyest.out
/petsc/src/ksp/ksp/examples/tests/output/ex3_chebynoest.out
/petsc/src/ksp/ksp/examples/tests/output/ex51_1.out
/petsc/src/ksp/ksp/examples/tests/output/ex51_2_alt.out
/petsc/src/ksp/ksp/examples/tutorials/ex15f.F90
/petsc/src/ksp/ksp/examples/tutorials/ex29.c
/petsc/src/ksp/ksp/examples/tutorials/ex49.c
/petsc/src/ksp/ksp/examples/tutorials/ex54.c
/petsc/src/ksp/ksp/examples/tutorials/ex55.c
/petsc/src/ksp/ksp/examples/tutorials/ex56.c
/petsc/src/ksp/ksp/examples/tutorials/ex59.c
/petsc/src/ksp/ksp/examples/tutorials/ex61f.F90
/petsc/src/ksp/ksp/examples/tutorials/ex72.c
/petsc/src/ksp/ksp/examples/tutorials/output/ex15_tsirm.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex22_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex25_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex25_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex29_5.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex29_5_alt.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex29_telescope.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex2_chebyest_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex32_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex34_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex35_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex35_3.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex36_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex43_3.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex43_4.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex43_nested_gmg.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex45f_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex49_5.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex50_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex50_3.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex50_tut_3.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex54_0.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex54_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex54_classical.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex54f_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex54f_1_alt_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex55_NC.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex55_classical.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex55_sa.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex56_1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex56_latebs-2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex56_latebs.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex56_ml.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex56_nns.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex56_nns_telescope.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex66_2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex72_zeropivot.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex72_zeropivot_3.out
/petsc/src/ksp/ksp/impls/bcgs/bcgs.c
/petsc/src/ksp/ksp/impls/bcgsl/bcgsl.c
/petsc/src/ksp/ksp/impls/bicg/bicg.c
/petsc/src/ksp/ksp/impls/cg/cg.c
/petsc/src/ksp/ksp/impls/cg/cgls.c
/petsc/src/ksp/ksp/impls/cgs/cgs.c
/petsc/src/ksp/ksp/impls/cheby/cheby.c
/petsc/src/ksp/ksp/impls/cr/cr.c
/petsc/src/ksp/ksp/impls/fcg/fcg.c
/petsc/src/ksp/ksp/impls/fetidp/fetidp.c
/petsc/src/ksp/ksp/impls/gcr/gcr.c
/petsc/src/ksp/ksp/impls/gmres/gmres.c
/petsc/src/ksp/ksp/impls/ibcgs/ibcgs.c
/petsc/src/ksp/ksp/impls/lcd/lcd.c
/petsc/src/ksp/ksp/impls/lsqr/lsqr.c
/petsc/src/ksp/ksp/impls/minres/minres.c
/petsc/src/ksp/ksp/impls/preonly/preonly.c
/petsc/src/ksp/ksp/impls/python/pythonksp.c
/petsc/src/ksp/ksp/impls/qcg/qcg.c
/petsc/src/ksp/ksp/impls/rich/rich.c
/petsc/src/ksp/ksp/impls/symmlq/symmlq.c
/petsc/src/ksp/ksp/impls/tcqmr/tcqmr.c
/petsc/src/ksp/ksp/impls/tfqmr/tfqmr.c
/petsc/src/ksp/ksp/impls/tsirm/tsirm.c
/petsc/src/ksp/ksp/interface/dlregisksp.c
/petsc/src/ksp/ksp/interface/iterativ.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/utils/lmvm/lmvmimpl.c
/petsc/src/ksp/pc/examples/tests/makefile
/petsc/src/ksp/pc/impls/asm/asm.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddcfetidp.c
/petsc/src/ksp/pc/impls/bddc/bddcnullspace.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bjacobi/bjacobi.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/galerkin/galerkin.c
/petsc/src/ksp/pc/impls/gamg/agg.c
/petsc/src/ksp/pc/impls/gasm/gasm.c
/petsc/src/ksp/pc/impls/is/pcis.c
/petsc/src/ksp/pc/impls/ksp/pcksp.c
/petsc/src/ksp/pc/impls/lsc/lsc.c
/petsc/src/ksp/pc/impls/mg/fmg.c
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/mg/smg.c
/petsc/src/ksp/pc/impls/patch/pcpatch.c
/petsc/src/ksp/pc/impls/redistribute/redistribute.c
/petsc/src/ksp/pc/impls/redundant/redundant.c
/petsc/src/ksp/pc/impls/telescope/telescope.c
/petsc/src/ksp/pc/impls/telescope/telescope_dmda.c
/petsc/src/ksp/pc/impls/wb/wb.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/examples/tests/ex104.c
/petsc/src/mat/examples/tests/ex173.c
/petsc/src/mat/examples/tests/ex181.c
/petsc/src/mat/examples/tests/ex182.c
/petsc/src/mat/examples/tests/ex4.c
/petsc/src/mat/examples/tests/ex94.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex182_2.out
/petsc/src/mat/examples/tests/output/ex182_4.out
/petsc/src/mat/examples/tests/output/ex182_6.out
/petsc/src/mat/examples/tutorials/ex1.c
/petsc/src/mat/examples/tutorials/ex17.c
/petsc/src/mat/examples/tutorials/ex2.c
/petsc/src/mat/examples/tutorials/ex9.c
/petsc/src/mat/examples/tutorials/makefile
/petsc/src/mat/examples/tutorials/output/ex17_1.out
/petsc/src/mat/examples/tutorials/output/ex1_1.out
/petsc/src/mat/examples/tutorials/output/ex2_1.out
/petsc/src/mat/examples/tutorials/output/ex9_1.out
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpimatmatmult.c
/petsc/src/mat/impls/aij/mpi/mpiptap.c
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/impls/sell/mpi/mpisell.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tests/ex68.c
/petsc/src/snes/examples/tests/ex69.c
/petsc/src/snes/examples/tests/output/ex68_1.out
/petsc/src/snes/examples/tests/output/ex68_2.out
/petsc/src/snes/examples/tests/output/ex69_4.out
/petsc/src/snes/examples/tests/output/ex69_5.out
/petsc/src/snes/examples/tests/output/ex69_8.out
/petsc/src/snes/examples/tests/output/ex69_8_alt.out
/petsc/src/snes/examples/tutorials/ex19.c
/petsc/src/snes/examples/tutorials/ex28.c
/petsc/src/snes/examples/tutorials/ex56.c
/petsc/src/snes/examples/tutorials/output/ex12_39.out
/petsc/src/snes/examples/tutorials/output/ex12_44.out
/petsc/src/snes/examples/tutorials/output/ex12_44_alt.out
/petsc/src/snes/examples/tutorials/output/ex12_gmg_bddc.out
/petsc/src/snes/examples/tutorials/output/ex12_gmg_bddc_alt.out
/petsc/src/snes/examples/tutorials/output/ex16_1.out
/petsc/src/snes/examples/tutorials/output/ex16_2.out
/petsc/src/snes/examples/tutorials/output/ex19_tut_2.out
/petsc/src/snes/examples/tutorials/output/ex19_tut_5.out
/petsc/src/snes/examples/tutorials/output/ex20_1.out
/petsc/src/snes/examples/tutorials/output/ex25_1.out
/petsc/src/snes/examples/tutorials/output/ex25_2.out
/petsc/src/snes/examples/tutorials/output/ex56_0.out
/petsc/src/snes/examples/tutorials/output/ex58_1.out
/petsc/src/snes/examples/tutorials/output/ex58_2.out
/petsc/src/snes/examples/tutorials/output/ex5_1.out
/petsc/src/snes/examples/tutorials/output/ex5_2.out
/petsc/src/snes/examples/tutorials/output/ex5_3.out
/petsc/src/snes/examples/tutorials/output/ex5_4.out
/petsc/src/snes/examples/tutorials/output/ex5_4_alt.out
/petsc/src/snes/examples/tutorials/output/ex62_20_parmetis.out
/petsc/src/snes/examples/tutorials/output/ex9_6.out
/petsc/src/snes/impls/ls/ls.c
/petsc/src/snes/linesearch/impls/bt/linesearchbt.c
/petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c
/petsc/src/sys/f90-src/fsrc/f90_fwrap.F
/petsc/src/tao/examples/tutorials/output/ex3_guess_pod.out
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex3.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/output/ex3_1.out
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/output/ex3_1_alt.out
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/output/ex3_1_alt_2.out
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/output/ex3_1_alt_3.out
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/output/ex3_1_alt_4.out
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/ex18.c
/petsc/src/ts/examples/tutorials/ex34.c
/petsc/src/ts/examples/tutorials/ex42.c
/petsc/src/ts/examples/tutorials/output/ex11_adv_0.out
/petsc/src/ts/examples/tutorials/output/ex11_glvis_adv_2d_quad.out
/petsc/src/ts/examples/tutorials/output/ex11_glvis_adv_2d_tet.out
/petsc/src/ts/examples/tutorials/output/ex42.out
/petsc/src/ts/examples/tutorials/output/ex47_2d_p1p1_mg_r1.out
vec/examples/tests/ex48.c
vec/examples/tests/output/ex48_1.out
6c04a3c509-Jan-2019 Fande Kong <fdkong.jd@gmail.com>

Create an API ISCreateSubIS that extracts

part of the original IS.

This API is similar to MatCreateSubMatrix


/petsc/config/BuildSystem/config/packages/exodusii.py
/petsc/config/BuildSystem/config/packages/mkl_sparse_optimize.py
/petsc/config/BuildSystem/config/packages/petsc4py.py
/petsc/gmakefile
/petsc/include/petsc/private/dmpleximpl.h
/petsc/include/petsc/private/fortranimpl.h
/petsc/include/petsc/private/kspimpl.h
/petsc/include/petsc/private/petscdsimpl.h
/petsc/include/petscdmlabel.h
/petsc/include/petscdmplex.h
/petsc/include/petscds.h
/petsc/include/petscfe.h
/petsc/include/petscis.h
/petsc/include/petscksp.h
/petsc/include/petscpc.h
/petsc/src/dm/dt/dualspace/impls/lagrange/dspacelagrange.c
/petsc/src/dm/dt/examples/tests/ex5.c
/petsc/src/dm/dt/examples/tests/output/ex5_0.out
/petsc/src/dm/dt/fe/interface/fe.c
/petsc/src/dm/dt/fe/interface/fegeom.c
/petsc/src/dm/dt/interface/dtds.c
/petsc/src/dm/dt/space/impls/poly/spacepoly.c
/petsc/src/dm/dt/space/impls/tensor/spacetensor.c
/petsc/src/dm/examples/tests/ex51.c
/petsc/src/dm/examples/tests/makefile
/petsc/src/dm/examples/tests/output/ex51_1.out
/petsc/src/dm/examples/tutorials/ex20.c
/petsc/src/dm/examples/tutorials/ex21.c
/petsc/src/dm/examples/tutorials/makefile
/petsc/src/dm/f90-mod/makefile
/petsc/src/dm/f90-mod/petscdmdamod.F
/petsc/src/dm/f90-mod/petscdmmod.F
/petsc/src/dm/f90-mod/petscdmplex.h90
/petsc/src/dm/field/examples/tutorials/ex1.c
/petsc/src/dm/field/examples/tutorials/output/ex1_ds.out
/petsc/src/dm/impls/plex/examples/tests/ex10.c
/petsc/src/dm/impls/plex/examples/tests/ex11.c
/petsc/src/dm/impls/plex/examples/tests/ex12.c
/petsc/src/dm/impls/plex/examples/tests/ex15.c
/petsc/src/dm/impls/plex/examples/tests/ex18.c
/petsc/src/dm/impls/plex/examples/tests/ex24.c
/petsc/src/dm/impls/plex/examples/tests/ex9.c
/petsc/src/dm/impls/plex/examples/tests/output/ex12_lb_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex12_lb_1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_part_parmetis_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_part_ptscotch_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_part_ptscotch_1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex24_3.out
/petsc/src/dm/impls/plex/examples/tutorials/ex1.c
/petsc/src/dm/impls/plex/examples/tutorials/ex1f90.F90
/petsc/src/dm/impls/plex/examples/tutorials/ex5.c
/petsc/src/dm/impls/plex/examples/tutorials/ex6.c
/petsc/src/dm/impls/plex/f90-custom/makefile
/petsc/src/dm/impls/plex/f90-custom/zplexf90.c
/petsc/src/dm/impls/plex/f90-custom/zplexsectionf90.c
/petsc/src/dm/impls/plex/makefile
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexpartition.c
/petsc/src/dm/impls/plex/plexsection.c
/petsc/src/dm/impls/stag/examples/tutorials/ex1.c
/petsc/src/dm/impls/stag/examples/tutorials/ex2.c
/petsc/src/dm/impls/stag/examples/tutorials/ex3.c
/petsc/src/dm/impls/stag/examples/tutorials/output/ex3_2.out
/petsc/src/dm/impls/stag/examples/tutorials/output/ex3_2_alt_4.out
/petsc/src/dm/interface/dm.c
/petsc/src/dm/label/dmlabel.c
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/petsc/src/ksp/ksp/impls/cg/cg.c
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/petsc/src/ksp/ksp/interface/dlregisksp.c
/petsc/src/ksp/ksp/interface/iterativ.c
/petsc/src/ksp/ksp/interface/itfunc.c
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/petsc/src/ksp/pc/impls/asm/asm.c
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/petsc/src/ksp/pc/impls/galerkin/galerkin.c
/petsc/src/ksp/pc/impls/gamg/agg.c
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/petsc/src/ksp/pc/impls/is/pcis.c
/petsc/src/ksp/pc/impls/ksp/pcksp.c
/petsc/src/ksp/pc/impls/lsc/lsc.c
/petsc/src/ksp/pc/impls/mg/fmg.c
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/petsc/src/ksp/pc/impls/patch/pcpatch.c
/petsc/src/ksp/pc/impls/redistribute/redistribute.c
/petsc/src/ksp/pc/impls/redundant/redundant.c
/petsc/src/ksp/pc/impls/telescope/telescope.c
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/petsc/src/ksp/pc/impls/wb/wb.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/examples/tests/ex173.c
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/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tests/ex68.c
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/petsc/src/snes/impls/ls/ls.c
/petsc/src/snes/linesearch/impls/bt/linesearchbt.c
/petsc/src/sys/f90-src/fsrc/f90_fwrap.F
/petsc/src/tao/examples/tutorials/output/ex3_guess_pod.out
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex3.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/output/ex3_1.out
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/output/ex3_1_alt.out
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/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/output/ex3_1_alt_4.out
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/ex18.c
/petsc/src/ts/examples/tutorials/ex34.c
/petsc/src/ts/examples/tutorials/ex42.c
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is/is/interface/index.c
430ada4928-Dec-2018 Barry Smith <bsmith@mcs.anl.gov>

Changed code to prevent memory leak in MatLoad_MPIAIJ() where the matrix could be preallocated twice.

Commit-type: bug-fix


/petsc/config/BuildSystem/config/package.py
/petsc/include/petsc/private/dmlabelimpl.h
/petsc/include/petscdm.h
/petsc/include/petscdmlabel.h
/petsc/src/dm/impls/forest/examples/tests/ex2.c
/petsc/src/dm/impls/forest/forest.c
/petsc/src/dm/impls/forest/p4est/pforest.c
/petsc/src/dm/impls/plex/examples/tests/ex10.c
/petsc/src/dm/impls/plex/examples/tests/ex11.c
/petsc/src/dm/impls/plex/examples/tests/ex20.c
/petsc/src/dm/impls/plex/examples/tests/ex23.c
/petsc/src/dm/impls/plex/examples/tests/ex6.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexadapt.c
/petsc/src/dm/impls/plex/plexdistribute.c
/petsc/src/dm/impls/plex/plexgeometry.c
/petsc/src/dm/impls/plex/plexhdf5.c
/petsc/src/dm/impls/plex/plexmed.c
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/petsc/src/dm/impls/plex/plexsubmesh.c
/petsc/src/dm/interface/dlregisdmdm.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/label/dmlabel.c
/petsc/src/dm/label/ftn-custom/zdmlabel.c
/petsc/src/mat/examples/tests/ex220.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex220_1.out
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/snes/utils/dmadapt.c
/petsc/src/tao/examples/tutorials/ex1.c
/petsc/src/tao/examples/tutorials/ex2.c
/petsc/src/tao/examples/tutorials/ex3.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/ex18.c
/petsc/src/ts/examples/tutorials/ex45.c
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/petsc/src/ts/examples/tutorials/ex47.c
/petsc/src/ts/examples/tutorials/ex48.c
/petsc/src/ts/examples/tutorials/ex49.c
/petsc/src/ts/interface/tsrhssplit.c
vec/examples/tests/ex13.c
a40b62d728-Dec-2018 BarryFSmith <bsmith@mcs.anl.gov>

Merged in barry/improve-manual (pull request #1289)

Fixes for begining of users manual and a variety of webpages including manual pages


/petsc/config/BuildSystem/config/packages/mkl_sparse_optimize.py
/petsc/include/makefile
/petsc/include/petsc/private/tshistoryimpl.h
/petsc/include/petscts.h
/petsc/src/dm/impls/plex/plexsubmesh.c
/petsc/src/dm/interface/dlregisdmdm.c
/petsc/src/docs/tex/manual/abstract.tex
/petsc/src/docs/tex/manual/acknowl.tex
/petsc/src/docs/tex/manual/intro.tex
/petsc/src/docs/tex/manual/makefile
/petsc/src/docs/tex/manual/manual.tex
/petsc/src/docs/tex/manual/part1.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/index.html
/petsc/src/docs/website/miscellaneous/external.html
/petsc/src/docs/website/publications/index.html
/petsc/src/ksp/ksp/examples/tutorials/ex1.c
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/petsc/src/ksp/ksp/impls/cheby/cheby.c
/petsc/src/ksp/ksp/interface/dlregisksp.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/gasm/gasm.c
/petsc/src/ksp/pc/impls/patch/pcpatch.c
/petsc/src/mat/impls/aij/seq/aijmkl/aijmkl.c
/petsc/src/mat/impls/baij/seq/baijsolvnat1.c
/petsc/src/mat/impls/baij/seq/baijsolvnat11.c
/petsc/src/mat/impls/baij/seq/baijsolvnat14.c
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/petsc/src/mat/impls/baij/seq/baijsolvnat3.c
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/petsc/src/mat/impls/baij/seq/baijsolvtran3.c
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/petsc/src/mat/impls/baij/seq/baijsolvtran6.c
/petsc/src/mat/impls/baij/seq/baijsolvtran7.c
/petsc/src/mat/impls/baij/seq/baijsolvtrann.c
/petsc/src/mat/impls/baij/seq/baijsolvtrannat1.c
/petsc/src/mat/impls/baij/seq/baijsolvtrannat2.c
/petsc/src/mat/impls/baij/seq/baijsolvtrannat3.c
/petsc/src/mat/impls/baij/seq/baijsolvtrannat4.c
/petsc/src/mat/impls/baij/seq/baijsolvtrannat5.c
/petsc/src/mat/impls/baij/seq/baijsolvtrannat6.c
/petsc/src/mat/impls/baij/seq/baijsolvtrannat7.c
/petsc/src/mat/impls/baij/seq/makefile
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/interface/dlregismat.c
/petsc/src/snes/examples/tutorials/ex12.c
/petsc/src/snes/examples/tutorials/output/ex12_2d_p1_0.out
/petsc/src/snes/examples/tutorials/output/ex12_2d_p1_1.out
/petsc/src/snes/examples/tutorials/output/ex12_2d_p1_2.out
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/petsc/src/snes/examples/tutorials/output/ex12_field_bc_2d_p2_1.out
/petsc/src/snes/examples/tutorials/output/ex12_field_bc_2d_p2_neumann_0.out
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/petsc/src/snes/examples/tutorials/output/ex12_field_bc_3d_p1_0.out
/petsc/src/snes/examples/tutorials/output/ex12_field_bc_3d_p1_1.out
/petsc/src/snes/examples/tutorials/output/ex12_field_bc_3d_p1_neumann_0.out
/petsc/src/snes/examples/tutorials/output/ex12_field_bc_3d_p1_neumann_1.out
/petsc/src/snes/examples/tutorials/output/ex12_field_bc_3d_p2_0.out
/petsc/src/snes/examples/tutorials/output/ex12_field_bc_3d_p2_1.out
/petsc/src/snes/examples/tutorials/output/ex12_field_bc_3d_p2_neumann_0.out
/petsc/src/snes/examples/tutorials/output/ex12_field_bc_3d_p2_neumann_1.out
/petsc/src/snes/impls/ms/ms.c
/petsc/src/snes/interface/dlregissnes.c
/petsc/src/snes/utils/dmplexsnes.c
/petsc/src/sys/classes/draw/interface/draw.c
/petsc/src/sys/classes/random/interface/dlregisrand.c
/petsc/src/sys/classes/viewer/impls/mathematica/mathematica.c
/petsc/src/sys/classes/viewer/interface/dlregispetsc.c
/petsc/src/sys/objects/pinit.c
/petsc/src/tao/interface/dlregistao.c
/petsc/src/tao/linesearch/interface/dlregis_taolinesearch.c
/petsc/src/ts/adapt/impls/history/adapthist.c
/petsc/src/ts/adapt/interface/tsadapt.c
/petsc/src/ts/event/tsevent.c
/petsc/src/ts/examples/tutorials/ex40.c
/petsc/src/ts/examples/tutorials/ex41.c
/petsc/src/ts/examples/tutorials/output/ex40.out
/petsc/src/ts/examples/tutorials/output/ex41_a.out
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/petsc/src/ts/examples/tutorials/output/ex41_c.out
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/petsc/src/ts/examples/tutorials/output/ex41_e.out
/petsc/src/ts/examples/tutorials/output/ex41_f.out
/petsc/src/ts/examples/tutorials/output/ex41_g.out
/petsc/src/ts/impls/arkimex/arkimex.c
/petsc/src/ts/impls/explicit/rk/rk.c
/petsc/src/ts/impls/explicit/ssp/ssp.c
/petsc/src/ts/impls/glee/glee.c
/petsc/src/ts/impls/implicit/glle/glle.c
/petsc/src/ts/impls/implicit/glle/glleadapt.c
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/ts/impls/symplectic/basicsymplectic/basicsymplectic.c
/petsc/src/ts/interface/dlregists.c
/petsc/src/ts/interface/tshistory.c
/petsc/src/ts/trajectory/interface/traj.c
is/ao/interface/dlregisdm.c
pf/interface/pf.c
vec/interface/dlregisvec.c
vscat/interface/dlregisvecscat.c
0e667e8f23-Dec-2018 Karl Rupp <me@karlrupp.net>

Merge branch 'knepley/fix-section-fortran' [PR #1280]

* knepley/fix-section-fortran:
Section: Added binding for PetscSFDistributeSection()


/petsc/config/gmakegentest.py
/petsc/config/testparse.py
/petsc/include/petscversion.h
/petsc/lib/petsc/conf/bfort-petsc.txt
/petsc/src/dm/examples/tests/ex24.c
/petsc/src/dm/examples/tests/ex25.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/manual/part1.tex
/petsc/src/docs/website/documentation/installation.html
/petsc/src/docs/website/download/index.html
/petsc/src/docs/website/features/gpus.html
/petsc/src/ksp/ksp/examples/tutorials/ex6.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/impls/gmres/fgmres/fgmres.c
/petsc/src/ksp/ksp/impls/gmres/gmres.c
/petsc/src/ksp/ksp/impls/gmres/lgmres/lgmres.c
/petsc/src/ksp/ksp/impls/gmres/pgmres/pgmres.c
/petsc/src/mat/color/impls/greedy/greedy.c
/petsc/src/mat/color/impls/jp/jp.c
/petsc/src/mat/color/impls/power/power.c
/petsc/src/mat/examples/tests/ex103.c
/petsc/src/mat/examples/tests/ex18.c
/petsc/src/mat/examples/tests/ex50.c
/petsc/src/mat/examples/tests/output/ex103_1.out
/petsc/src/mat/impls/aij/mpi/mkl_cpardiso/mkl_cpardiso.c
/petsc/src/mat/partition/impls/hierarchical/hierarchical.c
/petsc/src/snes/examples/tests/ex18f90.F90
/petsc/src/snes/examples/tutorials/ex77.c
/petsc/src/sys/examples/tests/ex23.c
/petsc/src/sys/examples/tests/ex23options
/petsc/src/sys/examples/tests/output/ex23_1.out
/petsc/src/ts/examples/tests/ex12.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex3.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex5.c
/petsc/src/ts/examples/tutorials/eimex/ct_vdp_imex.c
/petsc/src/ts/examples/tutorials/ex10.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/ex12.c
/petsc/src/ts/examples/tutorials/ex18.c
/petsc/src/ts/examples/tutorials/ex2.c
/petsc/src/ts/examples/tutorials/ex21.c
/petsc/src/ts/examples/tutorials/ex22.c
/petsc/src/ts/examples/tutorials/ex24.c
/petsc/src/ts/examples/tutorials/ex3.c
/petsc/src/ts/examples/tutorials/ex4.c
/petsc/src/ts/examples/tutorials/ex48.c
/petsc/src/ts/examples/tutorials/ex5.c
/petsc/src/ts/examples/tutorials/ex6.c
/petsc/src/ts/examples/tutorials/ex8.c
/petsc/src/ts/examples/tutorials/ex9.c
/petsc/src/ts/examples/tutorials/extchem.c
/petsc/src/ts/examples/tutorials/extchem.example.1
/petsc/src/ts/examples/tutorials/extchemfield.c
/petsc/src/ts/examples/tutorials/gasoline.inp
/petsc/src/ts/examples/tutorials/h2_10sp.inp
/petsc/src/ts/examples/tutorials/meth_ethanol.inp
/petsc/src/ts/examples/tutorials/phasefield/biharmonic.c
/petsc/src/ts/examples/tutorials/phasefield/biharmonictest.m
/petsc/src/ts/examples/tutorials/phasefield/heat.c
/petsc/src/ts/examples/tutorials/phasefield/heattest.m
/petsc/src/ts/examples/tutorials/power_grid/petscopt_ex7
/petsc/src/ts/examples/tutorials/power_grid/petscopt_ex8
/petsc/src/ts/interface/ts.c
is/utils/ftn-custom/zvsectionisf.c
8a69049121-Dec-2018 Barry Smith <bsmith@mcs.anl.gov>

Fixes for begining of users manual and a variety of webpages including manual pages

Commit-type: bug-fix, documentation


/petsc/config/gmakegentest.py
/petsc/config/testparse.py
/petsc/include/makefile
/petsc/include/petscversion.h
/petsc/lib/petsc/conf/bfort-petsc.txt
/petsc/src/dm/examples/tests/ex24.c
/petsc/src/dm/examples/tests/ex25.c
/petsc/src/dm/interface/dlregisdmdm.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/manual/abstract.tex
/petsc/src/docs/tex/manual/acknowl.tex
/petsc/src/docs/tex/manual/makefile
/petsc/src/docs/tex/manual/manual.tex
/petsc/src/docs/tex/manual/part1.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/documentation/installation.html
/petsc/src/docs/website/download/index.html
/petsc/src/docs/website/features/gpus.html
/petsc/src/docs/website/index.html
/petsc/src/docs/website/miscellaneous/external.html
/petsc/src/docs/website/publications/index.html
/petsc/src/ksp/ksp/examples/tutorials/ex1.c
/petsc/src/ksp/ksp/examples/tutorials/ex2.c
/petsc/src/ksp/ksp/examples/tutorials/ex6.c
/petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c
/petsc/src/ksp/ksp/impls/gmres/fgmres/fgmres.c
/petsc/src/ksp/ksp/impls/gmres/gmres.c
/petsc/src/ksp/ksp/impls/gmres/lgmres/lgmres.c
/petsc/src/ksp/ksp/impls/gmres/pgmres/pgmres.c
/petsc/src/ksp/ksp/interface/dlregisksp.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/mat/examples/tests/ex103.c
/petsc/src/mat/examples/tests/ex18.c
/petsc/src/mat/examples/tests/ex50.c
/petsc/src/mat/examples/tests/output/ex103_1.out
/petsc/src/mat/impls/aij/mpi/mkl_cpardiso/mkl_cpardiso.c
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/interface/dlregismat.c
/petsc/src/snes/examples/tests/ex18f90.F90
/petsc/src/snes/examples/tutorials/ex77.c
/petsc/src/snes/impls/ms/ms.c
/petsc/src/snes/interface/dlregissnes.c
/petsc/src/sys/classes/draw/interface/draw.c
/petsc/src/sys/classes/random/interface/dlregisrand.c
/petsc/src/sys/classes/viewer/impls/mathematica/mathematica.c
/petsc/src/sys/classes/viewer/interface/dlregispetsc.c
/petsc/src/sys/examples/tests/ex23.c
/petsc/src/sys/examples/tests/ex23options
/petsc/src/sys/examples/tests/output/ex23_1.out
/petsc/src/sys/objects/pinit.c
/petsc/src/tao/interface/dlregistao.c
/petsc/src/tao/linesearch/interface/dlregis_taolinesearch.c
/petsc/src/ts/adapt/interface/tsadapt.c
/petsc/src/ts/examples/tests/ex12.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex3.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex5.c
/petsc/src/ts/examples/tutorials/eimex/ct_vdp_imex.c
/petsc/src/ts/examples/tutorials/ex10.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/examples/tutorials/ex12.c
/petsc/src/ts/examples/tutorials/ex18.c
/petsc/src/ts/examples/tutorials/ex2.c
/petsc/src/ts/examples/tutorials/ex21.c
/petsc/src/ts/examples/tutorials/ex22.c
/petsc/src/ts/examples/tutorials/ex24.c
/petsc/src/ts/examples/tutorials/ex3.c
/petsc/src/ts/examples/tutorials/ex4.c
/petsc/src/ts/examples/tutorials/ex48.c
/petsc/src/ts/examples/tutorials/ex5.c
/petsc/src/ts/examples/tutorials/ex6.c
/petsc/src/ts/examples/tutorials/ex8.c
/petsc/src/ts/examples/tutorials/ex9.c
/petsc/src/ts/examples/tutorials/extchem.c
/petsc/src/ts/examples/tutorials/extchem.example.1
/petsc/src/ts/examples/tutorials/extchemfield.c
/petsc/src/ts/examples/tutorials/gasoline.inp
/petsc/src/ts/examples/tutorials/h2_10sp.inp
/petsc/src/ts/examples/tutorials/meth_ethanol.inp
/petsc/src/ts/examples/tutorials/phasefield/biharmonic.c
/petsc/src/ts/examples/tutorials/phasefield/biharmonictest.m
/petsc/src/ts/examples/tutorials/phasefield/heat.c
/petsc/src/ts/examples/tutorials/phasefield/heattest.m
/petsc/src/ts/examples/tutorials/power_grid/petscopt_ex7
/petsc/src/ts/examples/tutorials/power_grid/petscopt_ex8
/petsc/src/ts/impls/arkimex/arkimex.c
/petsc/src/ts/impls/explicit/rk/rk.c
/petsc/src/ts/impls/explicit/ssp/ssp.c
/petsc/src/ts/impls/glee/glee.c
/petsc/src/ts/impls/implicit/glle/glle.c
/petsc/src/ts/impls/implicit/glle/glleadapt.c
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/ts/impls/symplectic/basicsymplectic/basicsymplectic.c
/petsc/src/ts/interface/dlregists.c
/petsc/src/ts/interface/ts.c
is/ao/interface/dlregisdm.c
pf/interface/pf.c
vec/interface/dlregisvec.c
vscat/interface/dlregisvecscat.c
c93efe8218-Dec-2018 Matthew G. Knepley <knepley@gmail.com>

Section: Damn Damn Damn


is/utils/ftn-custom/zvsectionisf.c
353b39dd17-Dec-2018 Matthew G. Knepley <knepley@gmail.com>

Section: Somehow everything about that first commit was wrong


is/utils/ftn-custom/zvsectionisf.c
0d256f5d16-Dec-2018 Matthew G. Knepley <knepley@gmail.com>

Section: Added binding for PetscSFDistributeSection()
- Fortran is not allowed to pass in an array right now


/petsc/config/gmakegentest.py
/petsc/config/testparse.py
/petsc/include/petscsystypes.h
/petsc/lib/petsc/bin/maint/lex.py
/petsc/lib/petsc/conf/bfort-petsc.txt
/petsc/src/dm/examples/tests/ex24.c
/petsc/src/dm/examples/tests/ex25.c
/petsc/src/dm/interface/dm.c
/petsc/src/ksp/ksp/examples/tutorials/ex54f.F90
/petsc/src/ksp/ksp/examples/tutorials/ex6.c
/petsc/src/mat/examples/tests/ex103.c
/petsc/src/mat/examples/tests/ex18.c
/petsc/src/mat/examples/tests/output/ex103_1.out
/petsc/src/snes/examples/tutorials/ex77.c
/petsc/src/sys/f90-mod/petscsys.h
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/objects/ptype.c
is/utils/ftn-custom/zvsectionisf.c
219879fb16-Dec-2018 Barry Smith <bsmith@mcs.anl.gov>

Remove outdated requires: from top of several examples

Commit-type: testing-fix


/petsc/include/petscsystypes.h
/petsc/lib/petsc/bin/maint/lex.py
/petsc/src/ksp/ksp/examples/tests/ex49.c
/petsc/src/ksp/ksp/examples/tutorials/ex54f.F90
/petsc/src/ksp/ksp/examples/tutorials/ex8.c
/petsc/src/ksp/pc/examples/tests/ex1.c
/petsc/src/ksp/pc/examples/tutorials/ex2.c
/petsc/src/mat/examples/tests/ex50.c
/petsc/src/mat/examples/tutorials/ex12.c
/petsc/src/mat/examples/tutorials/ex2.c
/petsc/src/snes/examples/tutorials/ex21.c
/petsc/src/snes/examples/tutorials/ex46.c
/petsc/src/sys/f90-mod/petscsys.h
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/objects/ptype.c
/petsc/src/tao/leastsquares/examples/tutorials/chwirut2.c
vec/examples/tests/ex10.c
vec/examples/tests/ex14.c
vec/examples/tests/ex22.c
vec/examples/tests/ex23.c
vec/examples/tests/ex24.c
vec/examples/tests/ex33.c
vec/examples/tests/ex6.c
vec/examples/tests/ex7.c
vec/examples/tests/ex8.c
cc5f3a9314-Dec-2018 Karl Rupp <me@karlrupp.net>

Merge branch 'haplav/drop-support-hdf5-older-than-1.8.0' [PR #1268]

* haplav/drop-support-hdf5-older-than-1.8.0:
Drop support for HDF5 older than 1.8.0.
No attempts to take advantage of 1.8.0+ API t

Merge branch 'haplav/drop-support-hdf5-older-than-1.8.0' [PR #1268]

* haplav/drop-support-hdf5-older-than-1.8.0:
Drop support for HDF5 older than 1.8.0.
No attempts to take advantage of 1.8.0+ API to simplify codes, will be done progressively later
See also https://lists.mcs.anl.gov/pipermail/petsc-dev/2018-December/023812.html for discussion.

show more ...


/petsc/config/BuildSystem/config/compilers.py
/petsc/config/BuildSystem/config/packages/hdf5.py
/petsc/include/petsc/private/snesimpl.h
/petsc/include/petscmath.h
/petsc/lib/petsc/conf/rules
/petsc/src/dm/impls/da/gr2.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/mat/examples/tests/ex88.c
/petsc/src/mat/examples/tests/output/ex88_1.out
/petsc/src/mat/impls/shell/shell.c
/petsc/src/snes/examples/tutorials/output/ex62_pc_simplec.out
/petsc/src/snes/impls/ksponly/ksponly.c
/petsc/src/snes/impls/ls/ls.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c
is/is/impls/general/general.c
vec/impls/mpi/pdvec.c
8d3518a312-Dec-2018 Karl Rupp <me@karlrupp.net>

Merge branch 'barry/fix-aomemscalable-negative-indices-maint' [PR #1270]

* barry/fix-aomemscalable-negative-indices-maint:
Fix AOMEMORYSCALABLE for negative indices


/petsc/config/BuildSystem/config/libraries.py
/petsc/config/BuildSystem/config/packages/SuperLU_DIST.py
/petsc/config/BuildSystem/config/packages/Trilinos.py
/petsc/config/examples/arch-bgp-ibm-opt.py
/petsc/config/examples/arch-cray-xt6-pkgs-opt.py
/petsc/config/examples/arch-linux-analyzer.py
/petsc/config/examples/arch-linux-gcc-cxx-avx2.py
/petsc/config/examples/arch-linux-knl.py
/petsc/config/examples/arch-linux-pkgs-64idx.py
/petsc/config/examples/arch-linux-pkgs-cxx-mlib.py
/petsc/config/examples/arch-opensolaris-pkgs-opt.py
/petsc/config/examples/arch-osx-10.6-cxx-pkgs-opt.py
/petsc/include/petsc/private/tsimpl.h
/petsc/include/petscts.h
/petsc/src/ksp/ksp/impls/rich/rich.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ts/adapt/impls/basic/adaptbasic.c
/petsc/src/ts/adapt/interface/tsadapt.c
/petsc/src/ts/examples/tutorials/ex8.c
is/ao/examples/tests/ex5.c
1b75bf4f12-Dec-2018 Karl Rupp <me@karlrupp.net>

AO ex5: Fixed missing CHKERRQ();


is/ao/examples/tests/ex5.c
ded06c3f08-Dec-2018 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

strip preprocessor conditionals regarding HDF5 version


/petsc/config/BuildSystem/config/packages/Triangle.py
/petsc/config/BuildSystem/config/packages/hdf5.py
/petsc/config/BuildSystem/help.py
/petsc/config/gmakegen.py
/petsc/config/gmakegentest.py
/petsc/gmakefile
/petsc/gmakefile.test
/petsc/include/petsc/private/tshistoryimpl.h
/petsc/include/petsc/private/tsimpl.h
/petsc/include/petscerror.h
/petsc/src/dm/impls/da/gr2.c
/petsc/src/dm/impls/plex/generators/triangle/trigenerate.c
/petsc/src/ksp/ksp/impls/gmres/agmres/agmresorthog.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c
is/is/impls/general/general.c
vec/impls/mpi/pdvec.c
9032606e11-Dec-2018 Karl Rupp <me@karlrupp.net>

Merge branch 'barry/fix-aomemscalable-negative-indices-maint' [PR #1270]

* barry/fix-aomemscalable-negative-indices-maint:
Fix AOMEMORYSCALABLE for negative indices


/petsc/config/BuildSystem/config/packages/Triangle.py
/petsc/config/BuildSystem/help.py
/petsc/config/gmakegen.py
/petsc/config/gmakegentest.py
/petsc/gmakefile
/petsc/gmakefile.test
/petsc/include/petsc/private/tshistoryimpl.h
/petsc/include/petsc/private/tsimpl.h
/petsc/include/petscerror.h
/petsc/include/petscoptions.h
/petsc/include/petscsys.h
/petsc/src/dm/impls/plex/generators/triangle/trigenerate.c
/petsc/src/ksp/ksp/impls/gmres/agmres/agmresorthog.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c
/petsc/src/sys/objects/init.c
is/ao/examples/tests/ex5.c
is/ao/examples/tests/makefile
is/ao/examples/tests/output/ex5_1.out
is/ao/impls/memscalable/aomemscalable.c
6bd6ae5209-Dec-2018 Barry Smith <bsmith@mcs.anl.gov>

Fix AOMEMORYSCALABLE for negative indices

Commit-type: bug-fix, example
Reported-by: Huy Vo <Huy.Vo@colostate.edu>


/petsc/config/BuildSystem/config/compilerOptions.py
/petsc/config/BuildSystem/config/packages/MUMPS.py
/petsc/config/install.py
/petsc/include/petsc/finclude/petscsnes.h
/petsc/include/petscerror.h
/petsc/include/petscsnes.h
/petsc/include/petscsys.h
/petsc/makefile
/petsc/src/dm/impls/plex/examples/tutorials/ex1f90.F90
/petsc/src/dm/impls/plex/plexrefine.c
/petsc/src/docs/tex/manual/developers.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/mg/makefile
/petsc/src/mat/utils/axpy.c
/petsc/src/snes/examples/tutorials/ex3.c
/petsc/src/snes/examples/tutorials/ex5f.F90
/petsc/src/snes/examples/tutorials/output/ex3_5.out
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesj2.c
/petsc/src/sys/classes/viewer/impls/ascii/ftn-custom/zfilevf.c
/petsc/src/sys/classes/viewer/interface/viewreg.c
/petsc/src/sys/f90-mod/petscsysmod.F
/petsc/src/sys/objects/pname.c
is/ao/examples/tests/ex5.c
is/ao/examples/tests/makefile
is/ao/examples/tests/output/ex5_1.out
is/ao/impls/memscalable/aomemscalable.c
04edb84e06-Dec-2018 Karl Rupp <me@karlrupp.net>

Merge branch 'haplav/feature-mataij-load-from-hdf5' [PR #1232]

* haplav/feature-mataij-load-from-hdf5:
MatLoad() implementation for HDF5.
This PR done with cooperation with @Mari Pecha brings the HD

Merge branch 'haplav/feature-mataij-load-from-hdf5' [PR #1232]

* haplav/feature-mataij-load-from-hdf5:
MatLoad() implementation for HDF5.
This PR done with cooperation with @Mari Pecha brings the HDF5 matrix loader.
Its impact is twofold:
- It introduces a truly parallel reader where each rank reads its chunk of the matrix.
- It can directly read MATLAB's native MAT-file format (version 7.3) which is in fact an HDF5 flavor.

show more ...


/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/ADOLC.py
/petsc/config/BuildSystem/config/packages/ColPack.py
/petsc/include/petsc/private/pcpatchimpl.h
/petsc/include/petscviewerhdf5.h
/petsc/makefile
/petsc/share/petsc/datafiles/matrices/tiny_system_with_x0.mat
/petsc/share/petsc/datafiles/matrices/tiny_system_with_x0_complex.mat
/petsc/src/ksp/ksp/examples/tutorials/ex27.c
/petsc/src/ksp/ksp/examples/tutorials/output/ex27_3b_hdf5_nsize-1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex27_3b_hdf5_nsize-2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex27_4a_lsqr_hdf5.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex27_4b_ksp_lsqr_exact_mat_norm-0.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex27_4b_ksp_lsqr_exact_mat_norm-1.out
/petsc/src/ksp/pc/impls/patch/pcpatch.c
/petsc/src/ksp/pc/impls/pbjacobi/pbjacobi.c
/petsc/src/mat/examples/tutorials/ex10.c
/petsc/src/mat/examples/tutorials/output/ex10_mpiaij.out
/petsc/src/mat/examples/tutorials/output/ex10_mpiaij_hdf5.out
/petsc/src/mat/examples/tutorials/output/ex10_mpiaij_hdf5_tiny.out
/petsc/src/mat/examples/tutorials/output/ex10_mpibaij_hdf5.out
/petsc/src/mat/examples/tutorials/output/ex10_mpidense.out
/petsc/src/mat/examples/tutorials/output/ex10_seqaij.out
/petsc/src/mat/examples/tutorials/output/ex10_seqaij_hdf5.out
/petsc/src/mat/examples/tutorials/output/ex10_seqdense.out
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.h
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/aijhdf5.c
/petsc/src/mat/impls/aij/seq/makefile
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/interface/snesj2.c
/petsc/src/sys/classes/viewer/impls/hdf5/ftn-custom/zhdf5f.c
/petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c
/petsc/src/ts/examples/tutorials/autodiff/adolc-utils/contexts.cxx
/petsc/src/ts/examples/tutorials/autodiff/adolc-utils/drivers.cxx
/petsc/src/ts/examples/tutorials/autodiff/adolc-utils/init.cxx
/petsc/src/ts/examples/tutorials/autodiff/adolc-utils/matfree.cxx
/petsc/src/ts/examples/tutorials/autodiff/adolc-utils/sparse.cxx
/petsc/src/ts/examples/tutorials/autodiff/adr_ex1.cxx
/petsc/src/ts/examples/tutorials/autodiff/adr_ex5adj.cxx
/petsc/src/ts/examples/tutorials/autodiff/adr_ex5adj_mf.cxx
/petsc/src/ts/examples/tutorials/autodiff/ex16adj.cxx
/petsc/src/ts/examples/tutorials/autodiff/ex16adj_tl.cxx
/petsc/src/ts/examples/tutorials/autodiff/ex16opt_ic.cxx
/petsc/src/ts/examples/tutorials/autodiff/makefile
/petsc/src/ts/examples/tutorials/autodiff/output/adr_ex1_1.out
/petsc/src/ts/examples/tutorials/autodiff/output/adr_ex1_2.out
/petsc/src/ts/examples/tutorials/autodiff/output/adr_ex5adj_1.out
/petsc/src/ts/examples/tutorials/autodiff/output/adr_ex5adj_2.out
/petsc/src/ts/examples/tutorials/autodiff/output/adr_ex5adj_3.out
/petsc/src/ts/examples/tutorials/autodiff/output/adr_ex5adj_4.out
/petsc/src/ts/examples/tutorials/autodiff/output/adr_ex5adj_5.out
/petsc/src/ts/examples/tutorials/autodiff/output/adr_ex5adj_6.out
/petsc/src/ts/examples/tutorials/autodiff/output/adr_ex5adj_mf_1.out
/petsc/src/ts/examples/tutorials/autodiff/output/adr_ex5adj_mf_2.out
/petsc/src/ts/examples/tutorials/autodiff/output/ex16adj_1.out
/petsc/src/ts/examples/tutorials/autodiff/output/ex16adj_2.out
/petsc/src/ts/examples/tutorials/autodiff/output/ex16adj_3.out
/petsc/src/ts/examples/tutorials/autodiff/output/ex16adj_4.out
/petsc/src/ts/examples/tutorials/autodiff/output/ex16adj_tl_1.out
/petsc/src/ts/examples/tutorials/autodiff/output/ex16adj_tl_2.out
/petsc/src/ts/examples/tutorials/autodiff/output/ex16adj_tl_3.out
/petsc/src/ts/examples/tutorials/autodiff/output/ex16adj_tl_4.out
/petsc/src/ts/examples/tutorials/autodiff/output/ex16opt_ic_1.out
/petsc/src/ts/examples/tutorials/ex16opt_ic.c
/petsc/src/ts/examples/tutorials/output/ex16opt_ic_2.out
is/utils/pmap.c
cf90aa1903-Dec-2018 Barry Smith <bsmith@mcs.anl.gov>

NULL_XXX in Fortran is actually PETSC_NULL_XXX

Commit-type: feature, documentation


/petsc/config/BuildSystem/config/compilerOptions.py
/petsc/include/petsc/finclude/petscsnes.h
/petsc/include/petsc/finclude/petscts.h
/petsc/include/petsc/private/makefile
/petsc/include/petsc/private/tshistoryimpl.h
/petsc/include/petsc/private/tsimpl.h
/petsc/include/petscmath.h
/petsc/include/petscsnes.h
/petsc/include/petscts.h
/petsc/lib/petsc/bin/petsc-performance-view
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/index.html
/petsc/src/snes/impls/ksponly/ksponly.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesregi.c
/petsc/src/sys/classes/viewer/impls/draw/drawv.c
/petsc/src/sys/examples/tests/ex39.c
/petsc/src/sys/examples/tests/makefile
/petsc/src/sys/examples/tests/output/ex39.out
/petsc/src/sys/logging/plog.c
/petsc/src/sys/utils/makefile
/petsc/src/sys/utils/mathclose.c
/petsc/src/tao/unconstrained/examples/tutorials/burgers_spectral.c
/petsc/src/tao/unconstrained/examples/tutorials/spectraladjointassimilation.c
/petsc/src/ts/adapt/impls/history/adapthist.c
/petsc/src/ts/adapt/impls/history/makefile
/petsc/src/ts/adapt/impls/makefile
/petsc/src/ts/adapt/interface/tsadapt.c
/petsc/src/ts/examples/tests/ex13.c
/petsc/src/ts/examples/tests/makefile
/petsc/src/ts/examples/tests/output/ex13_1.out
/petsc/src/ts/examples/tests/output/ex13_2.out
/petsc/src/ts/examples/tests/output/ex13_3.out
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex5adj.c
/petsc/src/ts/examples/tutorials/ex16opt_ic.c
/petsc/src/ts/examples/tutorials/ex16opt_p.c
/petsc/src/ts/examples/tutorials/ex1f.F
/petsc/src/ts/examples/tutorials/ex20adj.c
/petsc/src/ts/examples/tutorials/ex20opt_ic.c
/petsc/src/ts/examples/tutorials/ex20opt_p.c
/petsc/src/ts/examples/tutorials/output/ex20adj_3.out
/petsc/src/ts/examples/tutorials/output/ex20adj_4.out
/petsc/src/ts/examples/tutorials/power_grid/ex3opt.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/output/ex9busadj_1.out
/petsc/src/ts/impls/explicit/rk/rk.c
/petsc/src/ts/impls/glee/glee.c
/petsc/src/ts/interface/dlregists.c
/petsc/src/ts/interface/makefile
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tshistory.c
/petsc/src/ts/trajectory/impls/basic/trajbasic.c
/petsc/src/ts/trajectory/impls/memory/trajmemory.c
/petsc/src/ts/trajectory/impls/singlefile/singlefile.c
/petsc/src/ts/trajectory/impls/visualization/trajvisualization.c
/petsc/src/ts/trajectory/interface/traj.c
/petsc/src/ts/trajectory/makefile
/petsc/src/ts/trajectory/utils/makefile
/petsc/src/ts/trajectory/utils/reconstruct.c
vec/interface/vector.c
6956642801-Dec-2018 Karl Rupp <me@karlrupp.net>

Vec ex18: Fixed compilation problems for complex.


vec/examples/tutorials/ex18.c
d0788b3530-Nov-2018 Barry Smith <bsmith@mcs.anl.gov>

ex19.c did not run for 2 processes because the blocksize caused different layouts for the 2 vectors in VecCopy()

Added test case to ex19.c and ex18.c

Commit-type: bug-fix, testing-fix
Reported-by:

ex19.c did not run for 2 processes because the blocksize caused different layouts for the 2 vectors in VecCopy()

Added test case to ex19.c and ex18.c

Commit-type: bug-fix, testing-fix
Reported-by: Sajid Ali <sajidsyed2021@u.northwestern.edu>

show more ...


/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/GLVis.py
/petsc/config/BuildSystem/config/packages/MFEM.py
/petsc/config/BuildSystem/config/packages/opengl.py
/petsc/config/BuildSystem/config/packages/p4est.py
/petsc/config/BuildSystem/config/packages/petsc4py.py
/petsc/config/examples/arch-c-exodus-dbg-builder.py
/petsc/config/examples/arch-freebsd-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-linux-cxx-cmplx-pkgs-64idx.py
/petsc/config/examples/arch-linux-pkgs-64idx.py
/petsc/config/examples/arch-linux-pkgs-gcov.py
/petsc/config/examples/arch-linux-pkgs-opt.py
/petsc/config/examples/arch-osx-10.6-cxx-pkgs-opt.py
/petsc/config/examples/arch-pardiso.py
/petsc/include/petsc/finclude/petscsnes.h
/petsc/include/petsc/private/dmforestimpl.h
/petsc/include/petsc/private/dmpleximpl.h
/petsc/include/petscdm.h
/petsc/include/petscdmforest.h
/petsc/include/petscdmplex.h
/petsc/include/petscdmtypes.h
/petsc/include/petscdraw.h
/petsc/include/petscdrawtypes.h
/petsc/include/petscsnes.h
/petsc/makefile
/petsc/share/petsc/datafiles/meshes/mesh-3d-box-innersphere.msh
/petsc/share/petsc/datafiles/meshes/mesh-3d-box-innersphere_bin.msh
/petsc/src/dm/dt/interface/dtds.c
/petsc/src/dm/impls/forest/examples/tests/ex2.c
/petsc/src/dm/impls/forest/examples/tests/output/ex2_2d.out
/petsc/src/dm/impls/forest/examples/tests/output/ex2_3d.out
/petsc/src/dm/impls/forest/examples/tests/output/ex2_p4est_3d_nans.out
/petsc/src/dm/impls/forest/examples/tests/output/ex2_steps2.out
/petsc/src/dm/impls/forest/examples/tests/output/ex2_steps2_notfb.out
/petsc/src/dm/impls/forest/examples/tests/output/ex2_steps3.out
/petsc/src/dm/impls/forest/examples/tutorials/ex1.c
/petsc/src/dm/impls/forest/examples/tutorials/output/ex1_brick_periodic_glvis.out
/petsc/src/dm/impls/forest/examples/tutorials/output/ex1_sphere.out
/petsc/src/dm/impls/forest/forest.c
/petsc/src/dm/impls/forest/p4est/pforest.c
/petsc/src/dm/impls/plex/examples/tests/ex1.c
/petsc/src/dm/impls/plex/examples/tests/ex12.c
/petsc/src/dm/impls/plex/examples/tests/output/ex12_8.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_glvis_2d_hyb.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_glvis_3d_hyb.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_glvis_3d_tet.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_glvis_3d_tet_per.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_gmsh_7.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_gmsh_8.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_bug_overlapsf.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_gmsh_periodic.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_gmsh_periodic_3d.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_gmsh_s2t_3d.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_gmsh_s2t_3d_hash.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_gmsh_surface.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_hyb_2d.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_hyb_3d.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_par_gmsh_periodic.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_par_gmsh_periodic_3d.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_par_gmsh_s2t_3d.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_par_gmsh_s2t_3d_hash.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_par_gmsh_surface.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_par_ovl_gmsh_periodic.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_par_ovl_gmsh_periodic_3d.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_par_ovl_gmsh_s2t_3d.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_par_ovl_gmsh_s2t_3d_hash.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_par_ovl_gmsh_surface.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_par_ovl_hyb_2d.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_par_ovl_hyb_3d.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_par_ovl_periodic.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_par_ovl_periodic_3d.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_par_periodic.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_par_periodic_3d.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_periodic.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_periodic_3d.out
/petsc/src/dm/impls/plex/examples/tests/output/ex1_p4est_s2t_bugfaces_3d.out
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexdistribute.c
/petsc/src/dm/impls/plex/plexglvis.c
/petsc/src/dm/impls/plex/plexinterpolate.c
/petsc/src/dm/impls/plex/plexproject.c
/petsc/src/dm/impls/plex/plexrefine.c
/petsc/src/dm/impls/plex/plextree.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/ksp/examples/tutorials/ex71.c
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_both_approx.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_dir_approx.out
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcschurs.c
/petsc/src/ksp/pc/impls/mg/makefile
/petsc/src/ksp/pc/impls/patch/pcpatch.c
/petsc/src/snes/examples/tutorials/ex12.c
/petsc/src/snes/examples/tutorials/output/ex12_p4est_exact_q2_conformal_parallel.out
/petsc/src/snes/examples/tutorials/output/ex12_p4est_exact_q2_conformal_parallel_alt.out
/petsc/src/snes/examples/tutorials/output/ex12_p4est_exact_q2_conformal_parallel_parmetis.out
/petsc/src/snes/examples/tutorials/output/ex12_p4est_exact_q2_conformal_parallel_parmetis_alt.out
/petsc/src/snes/examples/tutorials/output/ex12_p4est_exact_q2_conformal_serial.out
/petsc/src/snes/examples/tutorials/output/ex12_p4est_exact_q2_conformal_serial_alt.out
/petsc/src/snes/examples/tutorials/output/ex12_p4est_exact_q2_nonconformal_parallel_alt.out
/petsc/src/snes/examples/tutorials/output/ex12_p4est_exact_q2_nonconformal_serial_alt.out
/petsc/src/snes/examples/tutorials/output/ex12_p4est_fas_q2_conformal_serial.out
/petsc/src/snes/examples/tutorials/output/ex12_p4est_full_q2_nonconformal_parallel.out
/petsc/src/snes/examples/tutorials/output/ex12_p4est_full_q2_nonconformal_parallel_bddc_alt.out
/petsc/src/snes/examples/tutorials/output/ex12_p4est_full_q2_nonconformal_parallel_bddcfas.out
/petsc/src/snes/examples/tutorials/output/ex12_p4est_full_q2_nonconformal_parallel_bddcfas_alt.out
/petsc/src/snes/examples/tutorials/output/ex12_p4est_full_q2_nonconformal_serial.out
/petsc/src/snes/examples/tutorials/output/ex12_quad_q1_adapt_0.out
/petsc/src/sys/classes/draw/impls/makefile
/petsc/src/sys/classes/draw/interface/drawreg.c
/petsc/src/sys/classes/draw/interface/drawregall.c
/petsc/src/sys/classes/viewer/interface/viewreg.c
/petsc/src/sys/objects/pname.c
/petsc/src/ts/examples/tutorials/ex11.c
vec/examples/tutorials/ex18.c
vec/examples/tutorials/ex19.c
vec/examples/tutorials/output/ex18_1.out
vec/examples/tutorials/output/ex18_2.out
vec/examples/tutorials/output/ex19_1.out
vec/examples/tutorials/output/ex19_2.out
vec/examples/tutorials/output/ex19_3.out
vec/examples/tutorials/output/ex19_4.out
ec4d677d04-Nov-2018 Stefano Zampini <stefano.zampini@gmail.com>

PetscLayoutSetUp: don't mention "matrix" in the error message


/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexgeometry.c
/petsc/src/dm/impls/plex/plextree.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/label/dmlabel.c
is/utils/pmap.c
367003a628-Oct-2018 Stefano Zampini <stefano.zampini@gmail.com>

minor fixes


/petsc/include/petscviewer.h
/petsc/lib/petsc/bin/maint/runhtml.py
/petsc/share/petsc/datafiles/meshes/barycentricallyrefinedcube.h5
/petsc/src/dm/dt/dualspace/impls/lagrange/dspacelagrange.c
/petsc/src/dm/dt/dualspace/interface/dualspace.c
/petsc/src/dm/dt/examples/tests/output/ex5_0.out
/petsc/src/dm/dt/fe/impls/basic/febasic.c
/petsc/src/dm/dt/fe/interface/fe.c
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/dt/space/impls/poly/spacepoly.c
/petsc/src/dm/dt/space/impls/tensor/spacetensor.c
/petsc/src/dm/dt/space/interface/space.c
/petsc/src/dm/field/examples/tutorials/ex1.c
/petsc/src/dm/field/examples/tutorials/output/ex1_da.out
/petsc/src/dm/field/examples/tutorials/output/ex1_da_1.out
/petsc/src/dm/field/examples/tutorials/output/ex1_da_2.out
/petsc/src/dm/field/examples/tutorials/output/ex1_da_3.out
/petsc/src/dm/field/examples/tutorials/output/ex1_ds.out
/petsc/src/dm/field/examples/tutorials/output/ex1_ds_simplex_0.out
/petsc/src/dm/field/examples/tutorials/output/ex1_ds_simplex_1.out
/petsc/src/dm/field/examples/tutorials/output/ex1_ds_simplex_2.out
/petsc/src/dm/field/examples/tutorials/output/ex1_ds_tensor_2_0.out
/petsc/src/dm/field/examples/tutorials/output/ex1_ds_tensor_2_1.out
/petsc/src/dm/field/examples/tutorials/output/ex1_ds_tensor_2_2.out
/petsc/src/dm/field/examples/tutorials/output/ex1_ds_tensor_3_0.out
/petsc/src/dm/field/examples/tutorials/output/ex1_ds_tensor_3_1.out
/petsc/src/dm/field/examples/tutorials/output/ex1_ds_tensor_3_2.out
/petsc/src/dm/field/examples/tutorials/output/ex1_shell.out
/petsc/src/dm/impls/forest/forest.c
/petsc/src/dm/impls/forest/p4est/pforest.c
/petsc/src/dm/impls/plex/examples/tests/ex30.c
/petsc/src/dm/impls/plex/examples/tests/output/ex30_1.out
/petsc/src/dm/impls/plex/examples/tutorials/ex1f90.F90
/petsc/src/dm/impls/plex/examples/tutorials/ex5.c
/petsc/src/dm/impls/plex/examples/tutorials/output/ex5_new_dm_view.out
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexadapt.c
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/plex/plexdistribute.c
/petsc/src/dm/impls/plex/plexgenerate.c
/petsc/src/dm/impls/plex/plexgeometry.c
/petsc/src/dm/impls/plex/plexinterpolate.c
/petsc/src/dm/impls/plex/plexrefine.c
/petsc/src/dm/impls/plex/plexsubmesh.c
/petsc/src/dm/impls/plex/plextree.c
/petsc/src/dm/impls/stag/stag.c
/petsc/src/dm/impls/stag/stagutils.c
/petsc/src/dm/impls/swarm/examples/tests/ex1.c
/petsc/src/dm/impls/swarm/examples/tests/ex2.c
/petsc/src/dm/impls/swarm/examples/tests/makefile
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_0.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_quad_0.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_quad_2_faces.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_quad_2_faces_quad_order_2.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_quad_2_faces_quad_order_3.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_quad_5P.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_0.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_2_faces.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_2_faces_quad_order_3.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_3d.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_3d_2_faces.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_3d_5P.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_3d_mdx.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_3d_mdx_2_faces.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_3d_mdx_5P.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_3d_mdx_5P_2_faces.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_5P.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_mdx.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_mdx_5P.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_quad_order_3.out
/petsc/src/dm/impls/swarm/swarm.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/label/dmlabel.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/snes/examples/tutorials/ex3.c
/petsc/src/snes/examples/tutorials/output/ex3_5.out
/petsc/src/snes/interface/snes.c
/petsc/src/sys/examples/tests/ex44.cxx
/petsc/src/sys/examples/tests/ex45.cxx
/petsc/src/sys/examples/tests/ex46.cxx
/petsc/src/sys/examples/tests/ex47.c
/petsc/src/sys/examples/tests/ex48f90.F90
/petsc/src/sys/examples/tests/ex49.c
/petsc/src/sys/examples/tests/ex50.c
/petsc/src/sys/examples/tests/ex51.c
/petsc/src/sys/examples/tests/makefile
/petsc/src/sys/examples/tests/output/ex44_1.out
/petsc/src/sys/examples/tests/output/ex45_1.out
/petsc/src/sys/examples/tests/output/ex46_1.out
/petsc/src/sys/examples/tests/output/ex47_1.out
/petsc/src/sys/examples/tests/output/ex47_2.out
/petsc/src/sys/examples/tests/output/ex48f90_1.out
/petsc/src/sys/examples/tests/output/ex48f90_2.out
/petsc/src/sys/examples/tests/output/ex49_1.out
/petsc/src/sys/examples/tests/output/ex50_1.out
/petsc/src/sys/examples/tests/output/ex51_1.out
/petsc/src/sys/examples/tests/petsc.yml
/petsc/src/sys/examples/tutorials/ex3.c
/petsc/src/sys/examples/tutorials/ex4.c
/petsc/src/sys/examples/tutorials/ex5.c
/petsc/src/sys/examples/tutorials/ex8f90.F90
/petsc/src/sys/examples/tutorials/makefile
is/utils/vsectionis.c
vec/examples/tests/ex44.c
vec/examples/tests/ex5.c
vec/utils/projection.c
vec/utils/vinv.c
1ab378fc22-Nov-2018 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

Merge branch 'master' into haplav/feature-mataij-load-from-hdf5

because I need the test loop fix


/petsc/config/BuildSystem/config/packages/MUMPS.py
/petsc/config/BuildSystem/config/packages/adblaslapack.py
/petsc/config/examples/arch-freebsd-cxx-pkgs-opt.py
/petsc/config/gmakegentest.py
/petsc/config/install.py
/petsc/config/testparse.py
/petsc/include/petsc/private/dmpleximpl.h
/petsc/include/petscdmplex.h
/petsc/include/petscerror.h
/petsc/include/petscmath.h
/petsc/include/petscviewer.h
/petsc/include/petscviewerhdf5.h
/petsc/lib/petsc/bin/maint/runhtml.py
/petsc/share/petsc/datafiles/matrices/tiny_system_with_x0.mat
/petsc/share/petsc/datafiles/matrices/tiny_system_with_x0_complex.mat
/petsc/share/petsc/datafiles/meshes/barycentricallyrefinedcube.h5
/petsc/src/dm/impls/plex/examples/tests/ex18.c
/petsc/src/dm/impls/plex/examples/tests/ex28.c
/petsc/src/dm/impls/plex/examples/tests/ex29.c
/petsc/src/dm/impls/plex/examples/tests/ex30.c
/petsc/src/dm/impls/plex/examples/tests/ex4.c
/petsc/src/dm/impls/plex/examples/tests/output/ex18_4_tet_test_orient.out
/petsc/src/dm/impls/plex/examples/tests/output/ex29_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex29_1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex29_quad_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex30_1.out
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexcheckinterface.c
/petsc/src/dm/impls/plex/plexinterpolate.c
/petsc/src/dm/impls/plex/plexrefine.c
/petsc/src/dm/impls/swarm/examples/tests/ex1.c
/petsc/src/dm/impls/swarm/examples/tests/ex2.c
/petsc/src/dm/impls/swarm/examples/tests/makefile
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_0.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_quad_0.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_quad_2_faces.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_quad_2_faces_quad_order_2.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_quad_2_faces_quad_order_3.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_quad_5P.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_0.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_2_faces.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_2_faces_quad_order_3.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_3d.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_3d_2_faces.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_3d_5P.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_3d_mdx.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_3d_mdx_2_faces.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_3d_mdx_5P.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_3d_mdx_5P_2_faces.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_5P.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_mdx.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_mdx_5P.out
/petsc/src/dm/impls/swarm/examples/tests/output/ex2_proj_tri_quad_order_3.out
/petsc/src/dm/impls/swarm/swarm.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/label/dmlabel.c
/petsc/src/ksp/ksp/examples/tutorials/ex27.c
/petsc/src/ksp/ksp/examples/tutorials/output/ex27_3b_hdf5_nsize-1.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex27_3b_hdf5_nsize-2.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex27_4a_lsqr_hdf5.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex27_4b_ksp_lsqr_exact_mat_norm-0.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex27_4b_ksp_lsqr_exact_mat_norm-1.out
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/mat/examples/tests/ex72.c
/petsc/src/mat/examples/tutorials/ex10.c
/petsc/src/mat/examples/tutorials/output/ex10_mpiaij_hdf5_tiny.out
/petsc/src/mat/examples/tutorials/output/ex10_mpibaij_hdf5.out
/petsc/src/mat/impls/aij/seq/aijhdf5.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/utils/axpy.c
/petsc/src/snes/examples/tutorials/ex3.c
/petsc/src/snes/examples/tutorials/ex5f.F90
/petsc/src/snes/examples/tutorials/output/ex3_5.out
/petsc/src/snes/interface/snes.c
/petsc/src/sys/classes/viewer/impls/hdf5/ftn-custom/zhdf5f.c
/petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c
/petsc/src/sys/examples/tests/ex44.cxx
/petsc/src/sys/examples/tests/ex45.cxx
/petsc/src/sys/examples/tests/ex46.cxx
/petsc/src/sys/examples/tests/ex47.c
/petsc/src/sys/examples/tests/ex48f90.F90
/petsc/src/sys/examples/tests/ex49.c
/petsc/src/sys/examples/tests/ex50.c
/petsc/src/sys/examples/tests/ex51.c
/petsc/src/sys/examples/tests/makefile
/petsc/src/sys/examples/tests/output/ex44_1.out
/petsc/src/sys/examples/tests/output/ex45_1.out
/petsc/src/sys/examples/tests/output/ex46_1.out
/petsc/src/sys/examples/tests/output/ex47_1.out
/petsc/src/sys/examples/tests/output/ex47_2.out
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/petsc/src/sys/examples/tests/output/ex49_1.out
/petsc/src/sys/examples/tests/output/ex50_1.out
/petsc/src/sys/examples/tests/output/ex51_1.out
/petsc/src/sys/examples/tests/petsc.yml
/petsc/src/sys/examples/tutorials/ex3.c
/petsc/src/sys/examples/tutorials/ex4.c
/petsc/src/sys/examples/tutorials/ex5.c
/petsc/src/sys/examples/tutorials/ex8f90.F90
/petsc/src/sys/examples/tutorials/makefile
/petsc/src/sys/f90-mod/petscsysmod.F
vec/interface/rvector.c

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