vec - OpenGrok history log for /petsc/src/vec

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ea847aab	24-Jun-2018	Satish Balay <balay@mcs.anl.gov>	Merge remote-tracking branch 'origin/dalcinl/logging' /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/include/petsclog.h /petsc/src/dm/impls/forest/p4est/petsc_p4est_package.c /petsc/src/dm/interface/dlregisdmdm.c /petsc/src/dm/interface/dm.c /petsc/src/ksp/ksp/impls/gmres/agmres/agmres.c /petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c /petsc/src/ksp/ksp/interface/dlregisksp.c /petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/ksp/pc/impls/asm/asm.c /petsc/src/ksp/pc/impls/factor/ilu/ilu.c /petsc/src/ksp/pc/impls/telescope/telescope.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/baij/seq/baij.c /petsc/src/mat/impls/blockmat/seq/blockmat.c /petsc/src/mat/impls/mffd/mffd.c /petsc/src/mat/impls/sell/seq/sell.c /petsc/src/mat/interface/dlregismat.c /petsc/src/snes/impls/fas/fas.c /petsc/src/snes/impls/fas/fasfunc.c /petsc/src/snes/interface/dlregissnes.c /petsc/src/sys/classes/draw/interface/draw.c /petsc/src/sys/classes/random/interface/dlregisrand.c /petsc/src/sys/classes/viewer/interface/dlregispetsc.c /petsc/src/sys/classes/viewer/interface/view.c /petsc/src/sys/info/verboseinfo.c /petsc/src/sys/logging/ftn-custom/zplogf.c /petsc/src/sys/logging/plog.c /petsc/src/sys/objects/ftn-custom/zstart.c /petsc/src/sys/objects/pinit.c /petsc/src/sys/utils/mpitr.c /petsc/src/tao/interface/dlregistao.c /petsc/src/ts/characteristic/interface/characteristic.c /petsc/src/ts/characteristic/interface/slregis.c /petsc/src/ts/interface/dlregists.c /petsc/src/ts/trajectory/impls/memory/trajmemory.c is/ao/interface/dlregisdm.c is/sf/interface/dlregissf.c pf/interface/pf.c vec/interface/dlregisvec.c vscat/impls/vpscat.c vscat/impls/vpscat_mpi1.c vscat/interface/dlregisvecscat.c
61876ed4	24-Jun-2018	Satish Balay <balay@mcs.anl.gov>	Merge branch 'maint' /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/hdf5.py /petsc/config/BuildSystem/config/packages/sowing.py /petsc/config/PETSc/Configure.py /petsc/gmakefile.test /petsc/include/petsc/finclude/petscsys.h /petsc/include/petscdmtypes.h /petsc/lib/petsc/bin/maint/buildtest /petsc/lib/petsc/bin/maint/confignightly/cg2 /petsc/lib/petsc/bin/maint/confignightly/si /petsc/lib/petsc/bin/maint/confignightly/si2 /petsc/lib/petsc/bin/maint/confignightly/si3 /petsc/src/dm/examples/tutorials/ex11f90.F90 /petsc/src/docs/tex/manual/ArgonneReportTemplate.doc /petsc/src/docs/tex/manual/ArgonneReportTemplateLastPage.pdf /petsc/src/docs/tex/manual/ArgonneReportTemplatePage2.pdf /petsc/src/docs/tex/manual/developers.tex /petsc/src/docs/tex/manual/part2.tex /petsc/src/docs/tex/petsc.bib /petsc/src/docs/website/download/index.html /petsc/src/docs/website/index.html /petsc/src/ksp/ksp/examples/tutorials/ex44f.F90 /petsc/src/ksp/ksp/examples/tutorials/ex6f.F90 /petsc/src/ksp/pc/impls/mg/mgfunc.c /petsc/src/mat/impls/aij/seq/aijmkl/aijmkl.c /petsc/src/mat/impls/mffd/ftn-custom/zmffdf.c /petsc/src/mat/impls/mffd/mffd.c /petsc/src/sys/objects/options.c /petsc/src/sys/utils/str.c vec/examples/tutorials/ex21.c
d5ae2380	11-Jun-2018	Alp Dener <alp.dener@gmail.com>	removed diagonal Broyden matrix and buried it into SymBrdn as a scaling option /petsc/include/petscksp.h /petsc/include/petscmat.h /petsc/include/petscpc.h /petsc/include/petscpctypes.h /petsc/include/petsctao.h /petsc/src/ksp/ksp/utils/kspmatregi.c /petsc/src/ksp/ksp/utils/lmvm/badbrdn/badbrdn.c /petsc/src/ksp/ksp/utils/lmvm/badbrdn/makefile /petsc/src/ksp/ksp/utils/lmvm/bfgs/bfgs.c /petsc/src/ksp/ksp/utils/lmvm/bfgs/makefile /petsc/src/ksp/ksp/utils/lmvm/brdn/brdn.c /petsc/src/ksp/ksp/utils/lmvm/brdn/makefile /petsc/src/ksp/ksp/utils/lmvm/dfp/dfp.c /petsc/src/ksp/ksp/utils/lmvm/dfp/makefile /petsc/src/ksp/ksp/utils/lmvm/lmvm.h /petsc/src/ksp/ksp/utils/lmvm/lmvmimpl.c /petsc/src/ksp/ksp/utils/lmvm/lmvmutils.c /petsc/src/ksp/ksp/utils/lmvm/makefile /petsc/src/ksp/ksp/utils/lmvm/sr1/makefile /petsc/src/ksp/ksp/utils/lmvm/sr1/sr1.c /petsc/src/ksp/ksp/utils/lmvm/symbrdn/makefile /petsc/src/ksp/ksp/utils/lmvm/symbrdn/symbrdn.c /petsc/src/ksp/ksp/utils/lmvm/symbrdn/symbrdn.h /petsc/src/ksp/pc/impls/lmvm/lmvmpc.c /petsc/src/ksp/pc/impls/lmvm/makefile /petsc/src/ksp/pc/impls/makefile /petsc/src/ksp/pc/interface/pcregis.c /petsc/src/mat/impls/submat/submat.c /petsc/src/mat/interface/matrix.c /petsc/src/tao/bound/examples/tutorials/output/jbearing2_10.out /petsc/src/tao/bound/examples/tutorials/output/jbearing2_11.out /petsc/src/tao/bound/examples/tutorials/output/jbearing2_12.out /petsc/src/tao/bound/examples/tutorials/output/jbearing2_6.out /petsc/src/tao/bound/examples/tutorials/output/jbearing2_7.out /petsc/src/tao/bound/examples/tutorials/output/jbearing2_8.out /petsc/src/tao/bound/examples/tutorials/output/jbearing2_9.out /petsc/src/tao/bound/examples/tutorials/output/plate2_10.out /petsc/src/tao/bound/examples/tutorials/output/plate2_11.out /petsc/src/tao/bound/examples/tutorials/output/plate2_12.out /petsc/src/tao/bound/examples/tutorials/output/plate2_13.out /petsc/src/tao/bound/examples/tutorials/output/plate2_14.out /petsc/src/tao/bound/examples/tutorials/output/plate2_15.out /petsc/src/tao/bound/examples/tutorials/output/plate2_2.out /petsc/src/tao/bound/examples/tutorials/output/plate2_6.out /petsc/src/tao/bound/examples/tutorials/output/plate2f_1.out /petsc/src/tao/bound/examples/tutorials/output/plate2f_2.out /petsc/src/tao/bound/impls/blmvm/blmvm.c /petsc/src/tao/bound/impls/blmvm/blmvm.h /petsc/src/tao/bound/impls/bnk/bnk.c /petsc/src/tao/bound/impls/bnk/bnk.h /petsc/src/tao/bound/impls/bnk/bnls.c /petsc/src/tao/bound/impls/bnk/bntl.c /petsc/src/tao/bound/impls/bnk/bntr.c /petsc/src/tao/bound/impls/bqnk/bqnk.c /petsc/src/tao/bound/impls/bqnk/bqnk.h /petsc/src/tao/bound/impls/bqnk/bqnkls.c /petsc/src/tao/bound/impls/bqnk/bqnktl.c /petsc/src/tao/bound/impls/bqnk/bqnktr.c /petsc/src/tao/bound/impls/bqnk/makefile /petsc/src/tao/bound/impls/bqnls/bqnls.c /petsc/src/tao/bound/impls/bqnls/makefile /petsc/src/tao/bound/impls/makefile /petsc/src/tao/examples/tutorials/ex3.c /petsc/src/tao/examples/tutorials/output/ex3_guess_pod.out /petsc/src/tao/interface/taosolverregi.c /petsc/src/tao/pde_constrained/examples/tutorials/elliptic.c /petsc/src/tao/pde_constrained/examples/tutorials/output/elliptic_1.out /petsc/src/tao/pde_constrained/examples/tutorials/output/elliptic_2.out /petsc/src/tao/pde_constrained/examples/tutorials/output/parabolic_1.out /petsc/src/tao/pde_constrained/impls/lcl/lcl.c /petsc/src/tao/unconstrained/examples/tutorials/eptorsion1.c /petsc/src/tao/unconstrained/examples/tutorials/output/burgers_spectral.out /petsc/src/tao/unconstrained/examples/tutorials/output/burgers_spectral_2.out /petsc/src/tao/unconstrained/examples/tutorials/output/eptorsion1_1.out /petsc/src/tao/unconstrained/examples/tutorials/output/eptorsion1_2.out /petsc/src/tao/unconstrained/examples/tutorials/output/eptorsion1_3.out /petsc/src/tao/unconstrained/examples/tutorials/output/eptorsion2_1.out /petsc/src/tao/unconstrained/examples/tutorials/output/eptorsion2f_1.out /petsc/src/tao/unconstrained/examples/tutorials/output/eptorsion2f_2.out /petsc/src/tao/unconstrained/examples/tutorials/output/minsurf1_1.out /petsc/src/tao/unconstrained/examples/tutorials/output/minsurf1_3.out /petsc/src/tao/unconstrained/examples/tutorials/output/minsurf1_4.out /petsc/src/tao/unconstrained/examples/tutorials/output/minsurf1_5.out /petsc/src/tao/unconstrained/examples/tutorials/output/minsurf1_6.out /petsc/src/tao/unconstrained/examples/tutorials/output/minsurf1_7.out /petsc/src/tao/unconstrained/examples/tutorials/output/minsurf1_8.out /petsc/src/tao/unconstrained/examples/tutorials/output/minsurf1_9.out /petsc/src/tao/unconstrained/examples/tutorials/output/minsurf2_1.out /petsc/src/tao/unconstrained/examples/tutorials/output/minsurf2_2.out /petsc/src/tao/unconstrained/examples/tutorials/output/rosenbrock1_10.out /petsc/src/tao/unconstrained/examples/tutorials/output/rosenbrock1_2.out /petsc/src/tao/unconstrained/examples/tutorials/output/rosenbrock1_3.out /petsc/src/tao/unconstrained/examples/tutorials/output/rosenbrock1_5.out /petsc/src/tao/unconstrained/examples/tutorials/output/rosenbrock1_6.out /petsc/src/tao/unconstrained/examples/tutorials/output/rosenbrock1_7.out /petsc/src/tao/unconstrained/examples/tutorials/output/rosenbrock1f_1.out /petsc/src/tao/unconstrained/examples/tutorials/output/rosenbrock2_1.out /petsc/src/tao/unconstrained/examples/tutorials/output/spectraladjointassimilation_1.out /petsc/src/tao/unconstrained/examples/tutorials/output/spectraladjointassimilation_2.out /petsc/src/tao/unconstrained/examples/tutorials/output/spectraladjointassimilation_cn.out /petsc/src/tao/unconstrained/examples/tutorials/rosenbrock1.c /petsc/src/tao/unconstrained/examples/tutorials/spectraladjointassimilation.c /petsc/src/tao/unconstrained/impls/lmvm/lmvm.c /petsc/src/tao/unconstrained/impls/nls/nls.c /petsc/src/tao/unconstrained/impls/nls/nlsimpl.h /petsc/src/tao/unconstrained/impls/ntl/ntl.c /petsc/src/tao/unconstrained/impls/ntl/ntlimpl.h /petsc/src/tao/unconstrained/impls/ntr/ntr.c /petsc/src/tao/unconstrained/impls/ntr/ntrimpl.h /petsc/src/tao/unconstrained/impls/owlqn/owlqn.c vec/utils/projection.c
cd929ea3	02-May-2018	Alp Dener <alp.dener@gmail.com>	derived LMVM types added and moved into the KSP package /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/hdf5.py /petsc/config/BuildSystem/config/packages/sowing.py /petsc/include/petsc/private/matimpl.h /petsc/include/petsc/private/taoimpl.h /petsc/include/petsc/private/vecimpl.h /petsc/include/petscdmtypes.h /petsc/include/petscksp.h /petsc/include/petscmat.h /petsc/lib/petsc/bin/maint/buildtest /petsc/lib/petsc/bin/maint/confignightly/cg2 /petsc/lib/petsc/bin/maint/confignightly/si /petsc/lib/petsc/bin/maint/confignightly/si2 /petsc/lib/petsc/bin/maint/confignightly/si3 /petsc/src/docs/tex/manual/developers.tex /petsc/src/docs/tex/manual/part2.tex /petsc/src/docs/tex/petsc.bib /petsc/src/docs/website/download/index.html /petsc/src/docs/website/index.html /petsc/src/ksp/ksp/utils/kspmatregi.c /petsc/src/ksp/ksp/utils/lmvm/lbfgs/lbfgs.c /petsc/src/ksp/ksp/utils/lmvm/lbfgs/makefile /petsc/src/ksp/ksp/utils/lmvm/lbrdn/lbrdn.c /petsc/src/ksp/ksp/utils/lmvm/lbrdn/makefile /petsc/src/ksp/ksp/utils/lmvm/ldfp/ldfp.c /petsc/src/ksp/ksp/utils/lmvm/ldfp/makefile /petsc/src/ksp/ksp/utils/lmvm/lmbrdn/lmbrdn.c /petsc/src/ksp/ksp/utils/lmvm/lmbrdn/makefile /petsc/src/ksp/ksp/utils/lmvm/lmvm.c /petsc/src/ksp/ksp/utils/lmvm/lmvm.h /petsc/src/ksp/ksp/utils/lmvm/lsbrdn/lsbrdn.c /petsc/src/ksp/ksp/utils/lmvm/lsbrdn/makefile /petsc/src/ksp/ksp/utils/lmvm/lsr1/lsr1.c /petsc/src/ksp/ksp/utils/lmvm/lsr1/makefile /petsc/src/ksp/ksp/utils/lmvm/makefile /petsc/src/ksp/ksp/utils/makefile /petsc/src/ksp/ksp/utils/schurm/makefile /petsc/src/ksp/ksp/utils/schurm/schurm.c /petsc/src/ksp/ksp/utils/schurm/schurm.h /petsc/src/ksp/pc/impls/mg/mgfunc.c /petsc/src/mat/impls/aij/seq/aijmkl/aijmkl.c /petsc/src/mat/impls/mffd/ftn-custom/zmffdf.c /petsc/src/mat/impls/mffd/mffd.c /petsc/src/mat/impls/submat/submat.c /petsc/src/snes/mf/makefile /petsc/src/sys/utils/str.c /petsc/src/tao/bound/impls/blmvm/blmvm.c /petsc/src/tao/bound/impls/blmvm/blmvm.h /petsc/src/tao/bound/impls/bncg/bncg.c /petsc/src/tao/bound/impls/bnk/bnk.c /petsc/src/tao/bound/impls/bnk/bnk.h /petsc/src/tao/interface/taosolver.c /petsc/src/tao/interface/taosolver_bounds.c /petsc/src/tao/matrix/makefile /petsc/src/tao/pde_constrained/impls/lcl/lcl.c /petsc/src/tao/unconstrained/examples/tutorials/rosenbrock2.c /petsc/src/tao/unconstrained/impls/lmvm/lmvm.c /petsc/src/tao/unconstrained/impls/lmvm/lmvm.h /petsc/src/tao/unconstrained/impls/nls/nls.c /petsc/src/tao/unconstrained/impls/ntl/ntl.c /petsc/src/tao/unconstrained/impls/ntr/ntr.c /petsc/src/tao/unconstrained/impls/owlqn/owlqn.c vec/utils/projection.c
994fe344	22-Jun-2018	Lisandro Dalcin <dalcinl@gmail.com>	PetscInfo: Add missing errorchecking /petsc/src/dm/interface/dm.c /petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/ksp/pc/impls/factor/ilu/ilu.c /petsc/src/ksp/pc/impls/telescope/telescope.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/baij/seq/baij.c /petsc/src/mat/impls/blockmat/seq/blockmat.c /petsc/src/mat/impls/sell/seq/sell.c /petsc/src/sys/utils/mpitr.c /petsc/src/ts/characteristic/interface/characteristic.c vscat/impls/vpscat.c vscat/impls/vpscat_mpi1.c
fa2bb9fe	15-Jun-2018	Lisandro Dalcin <dalcinl@gmail.com>	Log: various fixes and cleanups - Reorganize declarations in petsclog.h - Better -log_exclude, now applies to all registered stages - Minor fixes to implementation of -info_exclude - PCASM: Log appl Log: various fixes and cleanups - Reorganize declarations in petsclog.h - Better -log_exclude, now applies to all registered stages - Minor fixes to implementation of -info_exclude - PCASM: Log apply-on-blocks KSP solves - Rename PetscLogDestroy() -> PetscLogFinalize() and hide it from the API show more ... /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/hdf5.py /petsc/config/BuildSystem/config/packages/sowing.py /petsc/include/petscdmtypes.h /petsc/include/petsclog.h /petsc/lib/petsc/bin/maint/buildtest /petsc/lib/petsc/bin/maint/confignightly/cg2 /petsc/lib/petsc/bin/maint/confignightly/si /petsc/lib/petsc/bin/maint/confignightly/si2 /petsc/lib/petsc/bin/maint/confignightly/si3 /petsc/src/dm/impls/forest/p4est/petsc_p4est_package.c /petsc/src/dm/interface/dlregisdmdm.c /petsc/src/docs/tex/manual/developers.tex /petsc/src/docs/tex/manual/part2.tex /petsc/src/docs/tex/petsc.bib /petsc/src/docs/website/download/index.html /petsc/src/docs/website/index.html /petsc/src/ksp/ksp/impls/gmres/agmres/agmres.c /petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c /petsc/src/ksp/ksp/interface/dlregisksp.c /petsc/src/ksp/pc/impls/asm/asm.c /petsc/src/ksp/pc/impls/mg/mgfunc.c /petsc/src/mat/impls/aij/seq/aijmkl/aijmkl.c /petsc/src/mat/impls/mffd/ftn-custom/zmffdf.c /petsc/src/mat/impls/mffd/mffd.c /petsc/src/mat/interface/dlregismat.c /petsc/src/snes/impls/fas/fas.c /petsc/src/snes/impls/fas/fasfunc.c /petsc/src/snes/interface/dlregissnes.c /petsc/src/sys/classes/draw/interface/draw.c /petsc/src/sys/classes/random/interface/dlregisrand.c /petsc/src/sys/classes/viewer/interface/dlregispetsc.c /petsc/src/sys/classes/viewer/interface/view.c /petsc/src/sys/info/verboseinfo.c /petsc/src/sys/logging/ftn-custom/zplogf.c /petsc/src/sys/logging/plog.c /petsc/src/sys/objects/pinit.c /petsc/src/sys/utils/str.c /petsc/src/tao/interface/dlregistao.c /petsc/src/ts/characteristic/interface/slregis.c /petsc/src/ts/interface/dlregists.c /petsc/src/ts/trajectory/impls/memory/trajmemory.c is/ao/interface/dlregisdm.c is/sf/interface/dlregissf.c pf/interface/pf.c vec/interface/dlregisvec.c vscat/interface/dlregisvecscat.c
96583f1d	19-Jun-2018	Satish Balay <balay@mcs.anl.gov>	fix valgrind errors not ok diff-vec_vscat_examples-ex4_2 # 0a1,56 # > ==12021== Conditional jump or move depends on uninitialised value(s) # > ==12021== at 0x521A35B: VecScatterSetFromOptions (vs fix valgrind errors not ok diff-vec_vscat_examples-ex4_2 # 0a1,56 # > ==12021== Conditional jump or move depends on uninitialised value(s) # > ==12021== at 0x521A35B: VecScatterSetFromOptions (vscreate.c:141) # > ==12021== by 0x521B3CE: VecScatterCreate (vscreate.c:316) # > ==12021== by 0x40C455: main (ex4.c:57) # > ==12021== Uninitialised value was created by a stack allocation # > ==12021== at 0x5219D9D: VecScatterSetFromOptions (vscreate.c:118) show more ... vscat/interface/vscreate.c
304e96a3	18-Jun-2018	Hong Zhang <hzhang@mcs.anl.gov>	bugfix for VecScatterSetFromOptions() Reported-by: Junchao Zhang <jczhang@mcs.anl.gov> /petsc/config/BuildSystem/config/packages/MOAB.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/include/petsc/private/logimpl.h /petsc/include/petsclog.h /petsc/include/petscsys.h /petsc/lib/petsc/bin/maint/startnightly /petsc/src/dm/impls/plex/plexdistribute.c /petsc/src/docs/tex/manual/developers.tex /petsc/src/docs/tex/petsc.bib /petsc/src/docs/tex/petscapp.bib /petsc/src/ksp/ksp/interface/itcl.c /petsc/src/mat/examples/tutorials/ex15.c /petsc/src/mat/examples/tutorials/output/ex15_3.out /petsc/src/mat/examples/tutorials/output/ex15_4.out /petsc/src/mat/examples/tutorials/output/ex15_4_alt.out /petsc/src/mat/examples/tutorials/output/ex15_4_alt_1.out /petsc/src/mat/examples/tutorials/output/ex15_4_alt_2.out /petsc/src/mat/examples/tutorials/output/ex15_4_alt_3.out /petsc/src/mat/impls/aij/seq/aijmkl/aijmkl.c /petsc/src/mat/impls/aij/seq/aijperm/aijperm.c /petsc/src/mat/impls/is/matis.c /petsc/src/mat/partition/impls/party/party.c /petsc/src/sys/classes/viewer/interface/dlregispetsc.c /petsc/src/sys/objects/pinit.c vscat/interface/vscreate.c
217044c2	11-Jun-2018	Lisandro Dalcin <dalcinl@gmail.com>	Event logging synchronization - Remove PetscLogEventBarrierBegin/PetscLogEventBarrierEnd - Option -log_sync enables barrier synchronization for all events - A few non-collective events are disabled Event logging synchronization - Remove PetscLogEventBarrierBegin/PetscLogEventBarrierEnd - Option -log_sync enables barrier synchronization for all events - A few non-collective events are disabled (eg. {Vec\|Mat}SetValues) show more ... /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petsc/private/logimpl.h /petsc/include/petsc/private/matimpl.h /petsc/include/petsc/private/vecimpl.h /petsc/include/petsclog.h /petsc/lib/petsc/bin/petsclogformat.py /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/plex/plexdistribute.c /petsc/src/dm/interface/dlregisdmdm.c /petsc/src/docs/tex/manual/part1.tex /petsc/src/docs/tex/manual/part2.tex /petsc/src/ksp/ksp/impls/bcgs/fbcgsr/fbcgsr.c /petsc/src/ksp/ksp/impls/ibcgs/ibcgs.c /petsc/src/ksp/pc/impls/is/nn/nn.c /petsc/src/mat/impls/aij/mpi/fdmpiaij.c /petsc/src/mat/interface/dlregismat.c /petsc/src/mat/interface/matrix.c /petsc/src/snes/impls/fas/fas.c /petsc/src/sys/logging/plog.c /petsc/src/sys/logging/utils/eventlog.c /petsc/src/sys/logging/utils/stagelog.c /petsc/src/sys/logging/xmllogevent.c /petsc/src/sys/objects/init.c /petsc/src/sys/objects/pinit.c is/sf/interface/sf.c vec/interface/dlregisvec.c vec/interface/rvector.c vec/interface/vector.c vec/utils/comb.c vec/utils/vinv.c vscat/impls/vscat.c
9fc7e16c	13-Jun-2018	Barry Smith <bsmith@mcs.anl.gov>	Broken: Added parallel ADIOS Vec write/read support Errors while reading the output file. It appears the write stage is not exporting the variables to the file when run in parallel. Commit-type: fe Broken: Added parallel ADIOS Vec write/read support Errors while reading the output file. It appears the write stage is not exporting the variables to the file when run in parallel. Commit-type: feature show more ... /petsc/src/sys/objects/pinit.c vec/impls/mpi/pdvec.c vec/utils/vecio.c
22580e64	13-Jun-2018	Barry Smith <bsmith@mcs.anl.gov>	Code can now write and read from sequential vectors for ADIOS Need to add support for vector rstart to run in parallel Commit-type: feature /petsc/include/petsc/private/vieweradiosimpl.h /petsc/src/sys/classes/viewer/impls/adios/adios.c /petsc/src/sys/objects/pinit.c vec/impls/mpi/pdvec.c vec/utils/vecio.c
f97e436b	13-Jun-2018	Satish Balay <balay@mcs.anl.gov>	revert unneeded fix in d48f17134fae3703bee80c4958e1a7d522bf5496 - the primary fix was to add PETSC_EXTERN /petsc/src/ts/impls/explicit/rk/rk.c vec/examples/tutorials/ex43.c
55485dfc	13-Jun-2018	Satish Balay <balay@mcs.anl.gov>	Merge remote-tracking branch 'origin/psanan/namespace-sr-constants' /petsc/include/petsc/private/petscimpl.h /petsc/src/dm/impls/plex/plex.c vec/utils/comb.c
f678e0b8	13-Jun-2018	Satish Balay <balay@mcs.anl.gov>	Merge remote-tracking branch 'origin/barry/add-c-bind-fortran-example' /petsc/include/petscvec.h /petsc/src/docs/tex/manual/developers.tex /petsc/src/docs/tex/manual/makefile /petsc/src/docs/tex/manual/part1.tex /petsc/src/ksp/pc/impls/bddc/bddc.c /petsc/src/ksp/pc/impls/bddc/bddcprivate.c /petsc/src/sys/examples/tests/ex42.c /petsc/src/sys/examples/tests/ex43.c /petsc/src/ts/examples/tutorials/ex21.c vec/examples/tutorials/ex21f90.F90 vec/examples/tutorials/ex43.c vec/examples/tutorials/ex43f.F90 vec/examples/tutorials/makefile vec/examples/tutorials/output/ex43f_1.out
79350f80	13-Jun-2018	Satish Balay <balay@mcs.anl.gov>	tests: fix compiles with IBM XL compilers Thanks-to: Serban Maerean <serban@us.ibm.com> /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/options/sharedLibraries.py /petsc/gmakefile.test /petsc/include/petsc/finclude/petscsys.h /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petscmat.h /petsc/include/petscvec.h /petsc/lib/petsc/bin/maint/builddist /petsc/lib/petsc/bin/maint/buildtest /petsc/lib/petsc/bin/maint/runhtml.py /petsc/makefile /petsc/share/petsc/matlab/makefile /petsc/src/dm/dt/interface/dt.c /petsc/src/dm/examples/tests/makefile /petsc/src/dm/impls/composite/pack.c /petsc/src/dm/impls/plex/plexpartition.c /petsc/src/docs/website/documentation/linearsolvertable.html /petsc/src/ksp/ksp/examples/tutorials/ex6f.F90 /petsc/src/ksp/ksp/impls/cg/gltr/gltr.c /petsc/src/ksp/pc/impls/bddc/bddc.c /petsc/src/ksp/pc/impls/bddc/bddcprivate.c /petsc/src/mat/examples/tests/ex219f.F90 /petsc/src/mat/examples/tests/makefile /petsc/src/mat/examples/tests/output/ex219f_1.out /petsc/src/mat/examples/tests/output/ex219f_2.out /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/interface/ftn-custom/zmatrixf.c /petsc/src/ts/examples/tutorials/ex21.c /petsc/src/ts/examples/tutorials/output/ex21_1.out /petsc/src/ts/examples/tutorials/power_grid/ex3sa.c /petsc/src/ts/examples/tutorials/power_grid/output/ex3sa_3.out /petsc/src/ts/impls/explicit/rk/rk.c /petsc/src/ts/interface/tssen.c vec/examples/tutorials/ex21.c
d48f1713	13-Jun-2018	Satish Balay <balay@mcs.anl.gov>	fix function name mangling to be call-able form fortran Fixes: arch-freebsd-cxx-cmplx-pkgs-dbg/tests/vec/vec/examples/tutorials/ex43f.o: In function `MAIN__': /usr/home/balay/petsc.next/src/vec/vec fix function name mangling to be call-able form fortran Fixes: arch-freebsd-cxx-cmplx-pkgs-dbg/tests/vec/vec/examples/tutorials/ex43f.o: In function `MAIN__': /usr/home/balay/petsc.next/src/vec/vec/examples/tutorials/ex43f.F90:48: undefined reference to `fillupvector' show more ... vec/examples/tutorials/ex43.c
2cf2a403	11-Jun-2018	Matthew G. Knepley <knepley@gmail.com>	Merge branch 'master' into knepley/feature-pc-patch * master: (562 commits) fix clang-analyzer warning Developers manual never use system randomizers in PETSc and example source code. missing Merge branch 'master' into knepley/feature-pc-patch * master: (562 commits) fix clang-analyzer warning Developers manual never use system randomizers in PETSc and example source code. missing CHKERRQ() DT: Reverting the tgamma change broke MPFR - I guess we need a nightly build with it in Add a test for ex21 Fix error in ex21 Add missing fortran interface that handles null objects DMComposite: add missing guards MatPreallocate: fix overpreallocation of local rows style fixes MatView_MPI_DA: do not print twice the class prefix MatSetOperation: stash the original MatView_XXX in the viewnative function pointer DMCreateInterpolation_DA gracefully error instead of catching FPE signals MatIncreaseOverlap: preserve communicator of index sets MatMPIAIJ: fix indentation and missing CHKERRQ ISBuildTwoSided: remove tabs and fix style Fix documentation PetscViewerDraw: fix unininitialized warning from valgrind MatConvert_SeqAIJ_SeqBAIJ: remove error for non square matrices and add MAT_REUSE_MATRIX case Mat: MAT_INPLACE_MATRIX can be used for transposition with rectangular matrices ... Conflicts: src/dm/dt/interface/dtfe.c src/dm/impls/plex/plex.c src/dm/impls/plex/plexfem.c src/snes/examples/tutorials/ex13.c src/snes/examples/tutorials/ex62.c src/snes/examples/tutorials/makefile src/snes/examples/tutorials/output/ex62_18.out src/snes/examples/tutorials/output/ex62_19.out src/snes/examples/tutorials/output/ex62_20.out src/snes/examples/tutorials/output/ex62_20_parmetis.out src/snes/examples/tutorials/output/ex62_21.out src/snes/examples/tutorials/output/ex62_22.out src/snes/examples/tutorials/output/ex62_23.out src/snes/examples/tutorials/output/ex62_24.out src/snes/examples/tutorials/output/ex62_25.out src/snes/examples/tutorials/output/ex62_26.out src/snes/examples/tutorials/output/ex62_27.out src/snes/examples/tutorials/output/ex62_28.out src/snes/examples/tutorials/output/ex62_29.out src/snes/examples/tutorials/output/ex62_2d_p3_1.out src/snes/examples/tutorials/output/ex62_30.out src/snes/examples/tutorials/output/ex62_31.out 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/petsc/src/ts/interface/makefile /petsc/src/ts/interface/sensitivity/makefile /petsc/src/ts/interface/sensitivity/tssen.c /petsc/src/ts/interface/ts.c /petsc/src/ts/interface/tscreate.c /petsc/src/ts/trajectory/interface/traj.c /petsc/src/ts/utils/dmdats.c /petsc/src/ts/utils/dmplexts.c is/ao/examples/tests/ex3d/makefile is/ao/examples/tests/makefile is/ao/impls/basic/aobasic.c is/ao/impls/mapping/aomapping.c is/ao/impls/memscalable/aomemscalable.c is/examples/tests/makefile is/is/examples/tests/makefile is/is/examples/tutorials/makefile is/is/impls/general/general.c is/is/interface/index.c is/is/utils/iscoloring.c is/is/utils/isdiff.c is/sf/examples/tests/makefile is/sf/examples/tutorials/makefile is/sf/interface/sf.c is/utils/isltog.c is/utils/pmap.c is/utils/vsectionis.c vec/examples/tests/ex28.c vec/examples/tests/makefile vec/examples/tests/output/ex28_1.out vec/examples/tutorials/ex1f.F90 vec/examples/tutorials/makefile vec/impls/mpi/pbvec.c vec/interface/f90-custom/zvectorf90.c vec/interface/ftn-custom/zvectorf.c vec/interface/rvector.c vec/interface/vector.c vec/utils/projection.c vec/utils/tagger/examples/tutorials/makefile vec/utils/vecstash.c vec/utils/vinv.c vscat/examples/ex3.c vscat/examples/ex4.c vscat/examples/makefile vscat/examples/output/ex4_1.out vscat/examples/output/ex4_1_alt.out vscat/examples/output/ex4_2.out vscat/impls/vpscat.c vscat/impls/vpscat.h vscat/impls/vpscat_mpi1.c vscat/impls/vpscat_mpi1.h vscat/impls/vscat.c vscat/interface/vscreate.c /petsc/systems/Apple/OSX/bin/makedmg /petsc/systems/Apple/OSX/examples/PETSc cocoa example/PETSc cocoa example.xcodeproj/project.pbxproj /petsc/systems/Apple/OSX/examples/PETSc cocoa example/PETSc cocoa example/PETSc cocoa example-Info.plist /petsc/systems/Apple/iOS/PETSc/PETSc.xcodeproj/project.pbxproj /petsc/systems/Apple/iOS/bin/makedmg
8a976931	11-Jun-2018	Barry Smith <bsmith@mcs.anl.gov>	More work on ADIOS viewer and VecView/Load capability Commit-type: feature /petsc/include/petsc/private/vieweradiosimpl.h /petsc/src/sys/classes/viewer/impls/adios/adios.c vec/impls/mpi/pdvec.c
a56f64ad	10-Jun-2018	Barry Smith <bsmith@mcs.anl.gov>	Begin implementation of ADIOS viewer and basic VecView and VecLoad Commit-type: feature /petsc/include/petscviewer.h /petsc/src/sys/classes/viewer/impls/adios/adios.c /petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c /petsc/src/sys/objects/pinit.c vec/examples/tutorials/ex10.c vec/examples/tutorials/output/ex10_1.out vec/examples/tutorials/output/ex10_2.out vec/examples/tutorials/output/ex10_3.out vec/examples/tutorials/output/ex10_4.out vec/examples/tutorials/output/ex10_5.out vec/examples/tutorials/output/ex10_6.out vec/interface/vector.c vec/utils/vecio.c
fe9b9654	10-Jun-2018	Barry Smith <bsmith@mcs.anl.gov>	Yet another attempt to make portable the Fortran example that uses a bind C function with PETSc object Commit-type: bug-fix, portability-fix, testing-fix, example Reported-by: nightly build vec/examples/tutorials/ex43f.F90
e8f14785	23-May-2018	Lisandro Dalcin <dalcinl@gmail.com>	Update hash table implementation * Upgrade khash.h to version 0.2.8 * Add common API for hash table iterators * Add generic hash map and set APIs * Add hash map and set for integer and pair of integ Update hash table implementation * Upgrade khash.h to version 0.2.8 * Add common API for hash table iterators * Add generic hash map and set APIs * Add hash map and set for integer and pair of integers show more ... /petsc/config/BuildSystem/config/compilers.py /petsc/include/petsc/private/dmforestimpl.h /petsc/include/petsc/private/dmlabelimpl.h /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petsc/private/hashmap.h /petsc/include/petsc/private/hashmapi.h /petsc/include/petsc/private/hashmapij.h /petsc/include/petsc/private/hashset.h /petsc/include/petsc/private/hashseti.h /petsc/include/petsc/private/hashsetij.h /petsc/include/petsc/private/hashtable.h /petsc/include/petsc/private/kernels/khash.h /petsc/include/petsc/private/makefile /petsc/include/petscsys.h /petsc/src/dm/impls/plex/plexcreate.c /petsc/src/dm/impls/plex/plexfem.c /petsc/src/dm/impls/plex/plexinterpolate.c /petsc/src/dm/impls/plex/plexpartition.c /petsc/src/dm/impls/swarm/swarm.c /petsc/src/dm/label/dmlabel.c /petsc/src/mat/impls/preallocator/matpreallocator.c /petsc/src/sys/classes/viewer/interface/viewreg.c /petsc/src/sys/examples/tests/ex40.c /petsc/src/sys/examples/tests/ex41.c /petsc/src/sys/examples/tests/ex42.c /petsc/src/sys/examples/tests/ex43.c /petsc/src/sys/examples/tests/output/ex40_1.out /petsc/src/sys/examples/tests/output/ex41_1.out /petsc/src/sys/examples/tests/output/ex42_1.out /petsc/src/sys/examples/tests/output/ex43_1.out is/utils/isltog.c
2c550ae6	09-Jun-2018	Barry Smith <bsmith@mcs.anl.gov>	give modules in different examples unique names so they don't conflict Commit-type: bug-fix, portability-fix Reported-by: nightly tests vec/examples/tutorials/ex21f90.F90 vec/examples/tutorials/ex43f.F90
1bcc1f42	08-Jun-2018	Barry Smith <bsmith@mcs.anl.gov>	Merge branch 'maint' /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/BuildSystem/config/packages/Matlab.py /petsc/config/BuildSystem/config/packages/PTScotch.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/options/sharedLibraries.py /petsc/config/gmakegentest.py /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petscmat.h /petsc/include/petsctao.h /petsc/include/petsctaolinesearch.h /petsc/lib/petsc/bin/maint/builddist /petsc/lib/petsc/bin/maint/buildtest /petsc/lib/petsc/bin/maint/runhtml.py /petsc/lib/petsc/conf/test /petsc/makefile /petsc/share/petsc/matlab/makefile /petsc/src/dm/dt/interface/dt.c /petsc/src/dm/examples/tests/makefile /petsc/src/dm/impls/composite/pack.c /petsc/src/dm/impls/da/dainterp.c /petsc/src/dm/impls/da/fdda.c /petsc/src/dm/impls/forest/p4est/pforest.c /petsc/src/dm/impls/moab/makefile /petsc/src/dm/impls/network/network.c /petsc/src/dm/impls/plex/plexpartition.c /petsc/src/docs/manualpages-sec/header_DMMOAB /petsc/src/docs/manualpages-sec/header_Sensitivity /petsc/src/docs/website/documentation/index.html /petsc/src/docs/website/documentation/linearsolvertable.html /petsc/src/ksp/ksp/impls/cg/gltr/gltr.c /petsc/src/mat/examples/tests/ex104.c /petsc/src/mat/examples/tests/ex183.c /petsc/src/mat/examples/tests/ex184.c /petsc/src/mat/examples/tests/ex219f.F90 /petsc/src/mat/examples/tests/ex49.c /petsc/src/mat/examples/tests/ex58.c /petsc/src/mat/examples/tests/makefile /petsc/src/mat/examples/tests/output/ex219f_1.out /petsc/src/mat/examples/tests/output/ex219f_2.out /petsc/src/mat/examples/tests/output/ex49_r1.out /petsc/src/mat/examples/tests/output/ex49_r1_par.out /petsc/src/mat/impls/aij/mpi/mmaij.c /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/mpi/mpiov.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/aijmkl/aijmkl.c /petsc/src/mat/impls/baij/mpi/baijov.c /petsc/src/mat/impls/baij/mpi/mmbaij.c /petsc/src/mat/impls/baij/mpi/mpibaij.c /petsc/src/mat/impls/baij/seq/aijbaij.c /petsc/src/mat/impls/baij/seq/baij.c /petsc/src/mat/impls/dense/mpi/mpidense.c /petsc/src/mat/impls/dense/seq/dense.c /petsc/src/mat/impls/elemental/matelem.cxx /petsc/src/mat/impls/nest/matnest.c /petsc/src/mat/impls/sbaij/mpi/mmsbaij.c /petsc/src/mat/impls/sell/mpi/mmsell.c /petsc/src/mat/impls/sell/seq/sell.c /petsc/src/mat/interface/ftn-custom/zmatrixf.c /petsc/src/mat/interface/matrix.c /petsc/src/snes/interface/noise/snesnoise.c /petsc/src/snes/interface/snes.c /petsc/src/sys/classes/viewer/impls/draw/drawv.c /petsc/src/sys/classes/viewer/impls/socket/matlab/sclose.c /petsc/src/sys/classes/viewer/impls/socket/matlab/sopen.c /petsc/src/sys/classes/viewer/impls/socket/matlab/sread.c /petsc/src/sys/classes/viewer/impls/socket/matlab/swrite.c /petsc/src/tao/bound/impls/blmvm/blmvm.c /petsc/src/tao/interface/taosolver.c /petsc/src/tao/leastsquares/examples/matlab/ProblemFinalize.m /petsc/src/tao/leastsquares/examples/matlab/ProblemInitialize.m /petsc/src/tao/leastsquares/examples/matlab/README /petsc/src/tao/leastsquares/examples/matlab/TestingFinalize.m /petsc/src/tao/leastsquares/examples/matlab/TestingInitialize.m /petsc/src/tao/leastsquares/examples/matlab/TestingPlot.m /petsc/src/tao/leastsquares/examples/matlab/makefile /petsc/src/tao/leastsquares/examples/matlab/more_wild_probs/dfo.dat /petsc/src/tao/leastsquares/examples/matlab/more_wild_probs/dfovec.m /petsc/src/tao/leastsquares/examples/matlab/more_wild_probs/dfovec_wrap.m /petsc/src/tao/leastsquares/examples/matlab/more_wild_probs/dfoxs.m /petsc/src/tao/leastsquares/examples/matlab/more_wild_probs/perf_profile.m /petsc/src/tao/leastsquares/examples/matlab/taopounders.c /petsc/src/tao/leastsquares/impls/pounders/pounders.c /petsc/src/tao/linesearch/interface/taolinesearch.c /petsc/src/ts/examples/tutorials/ex21.c /petsc/src/ts/examples/tutorials/output/ex21_1.out /petsc/src/ts/examples/tutorials/power_grid/ex3sa.c /petsc/src/ts/examples/tutorials/power_grid/output/ex3sa_3.out /petsc/src/ts/f90-mod/petsctsmod.F /petsc/src/ts/impls/explicit/rk/rk.c /petsc/src/ts/interface/makefile /petsc/src/ts/interface/sensitivity/makefile /petsc/src/ts/interface/sensitivity/tssen.c is/is/impls/general/general.c is/is/utils/iscoloring.c is/utils/pmap.c
39d35803	08-Jun-2018	Barry Smith <bsmith@mcs.anl.gov>	Fixes for Fortran example: no return in main, 5 must be passed as variable for 64 bit indices, need to link with Fortran compiler Commit-type: bug-fix, portability-fix, testing-fix Reported-by: nigh Fixes for Fortran example: no return in main, 5 must be passed as variable for 64 bit indices, need to link with Fortran compiler Commit-type: bug-fix, portability-fix, testing-fix Reported-by: nightly tests show more ... vec/examples/tutorials/ex43.c vec/examples/tutorials/ex43f.F90 vec/examples/tutorials/output/ex43f_1.out
4c02969d	08-Jun-2018	Barry Smith <bsmith@mcs.anl.gov>	stub code for ADIOS viewer and vector viewing Commit-type: feature /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/packages/ADIOS.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/BuildSystem/config/packages/Matlab.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/options/sharedLibraries.py /petsc/config/gmakegentest.py /petsc/include/petsc/finclude/petscviewer.h /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petsctao.h /petsc/include/petsctaolinesearch.h /petsc/include/petscviewer.h /petsc/lib/petsc/bin/maint/builddist /petsc/lib/petsc/bin/maint/buildtest /petsc/lib/petsc/bin/maint/runhtml.py /petsc/lib/petsc/conf/test /petsc/makefile /petsc/share/petsc/matlab/makefile /petsc/src/dm/dt/interface/dt.c /petsc/src/dm/examples/tests/makefile /petsc/src/dm/impls/moab/makefile /petsc/src/dm/impls/plex/plexpartition.c /petsc/src/docs/manualpages-sec/header_DMMOAB /petsc/src/docs/manualpages-sec/header_Sensitivity /petsc/src/docs/website/documentation/index.html /petsc/src/docs/website/documentation/linearsolvertable.html /petsc/src/ksp/ksp/impls/cg/gltr/gltr.c /petsc/src/mat/examples/tests/ex183.c /petsc/src/mat/examples/tests/ex184.c /petsc/src/mat/examples/tests/ex219f.F90 /petsc/src/mat/examples/tests/makefile /petsc/src/mat/examples/tests/output/ex219f_1.out /petsc/src/mat/examples/tests/output/ex219f_2.out /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/aijmkl/aijmkl.c /petsc/src/snes/interface/snes.c /petsc/src/sys/classes/viewer/impls/adios/adios.c /petsc/src/sys/classes/viewer/impls/adios/makefile /petsc/src/sys/classes/viewer/impls/makefile /petsc/src/sys/classes/viewer/impls/socket/matlab/sclose.c /petsc/src/sys/classes/viewer/impls/socket/matlab/sopen.c /petsc/src/sys/classes/viewer/impls/socket/matlab/sread.c /petsc/src/sys/classes/viewer/impls/socket/matlab/swrite.c /petsc/src/sys/classes/viewer/interface/viewregall.c /petsc/src/tao/bound/impls/blmvm/blmvm.c /petsc/src/tao/interface/taosolver.c /petsc/src/tao/leastsquares/examples/matlab/ProblemFinalize.m /petsc/src/tao/leastsquares/examples/matlab/ProblemInitialize.m /petsc/src/tao/leastsquares/examples/matlab/README /petsc/src/tao/leastsquares/examples/matlab/TestingFinalize.m /petsc/src/tao/leastsquares/examples/matlab/TestingInitialize.m /petsc/src/tao/leastsquares/examples/matlab/TestingPlot.m /petsc/src/tao/leastsquares/examples/matlab/makefile /petsc/src/tao/leastsquares/examples/matlab/more_wild_probs/dfo.dat /petsc/src/tao/leastsquares/examples/matlab/more_wild_probs/dfovec.m /petsc/src/tao/leastsquares/examples/matlab/more_wild_probs/dfovec_wrap.m /petsc/src/tao/leastsquares/examples/matlab/more_wild_probs/dfoxs.m /petsc/src/tao/leastsquares/examples/matlab/more_wild_probs/perf_profile.m /petsc/src/tao/leastsquares/examples/matlab/taopounders.c /petsc/src/tao/leastsquares/impls/pounders/pounders.c /petsc/src/tao/linesearch/interface/taolinesearch.c /petsc/src/ts/examples/tutorials/power_grid/ex3sa.c /petsc/src/ts/examples/tutorials/power_grid/output/ex3sa_3.out /petsc/src/ts/f90-mod/petsctsmod.F /petsc/src/ts/impls/explicit/rk/rk.c /petsc/src/ts/interface/makefile /petsc/src/ts/interface/sensitivity/makefile /petsc/src/ts/interface/sensitivity/tssen.c vec/impls/mpi/pdvec.c vec/impls/mpi/pvecimpl.h vec/impls/seq/bvec2.c
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