History log of /petsc/src/vec/ (Results 2276 – 2300 of 6950)
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856751a512-Mar-2018 Barry Smith <bsmith@mcs.anl.gov>

VecScatterInitializePackage() must be called otherwise VEC_SCATTER_CLASSID is not set in ksp/ksp/examples/tutorials/ex100.c and Python fails with its uninitialized value of 0.

Commit-type: bug-fix
R

VecScatterInitializePackage() must be called otherwise VEC_SCATTER_CLASSID is not set in ksp/ksp/examples/tutorials/ex100.c and Python fails with its uninitialized value of 0.

Commit-type: bug-fix
Reported-by: nightly tests

show more ...


/petsc/src/mat/examples/tests/ex135.c
vec/interface/dlregisvec.c
2dc8f7eb12-Mar-2018 Karl Rupp <me@karlrupp.net>

Merge branch 'haplav/fix-PetscSFView-no-graph-set' [PR #878]

* haplav/fix-PetscSFView-no-graph-set:
PetscSFView: call PetscSFSetUp only if graph is set.


/petsc/.gitignore
/petsc/.travis.yml
/petsc/config/BuildSystem/RDict.py
/petsc/config/BuildSystem/config/framework.py
/petsc/config/BuildSystem/config/packages/cuda.py
/petsc/config/BuildSystem/config/packages/cusp.py
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/options/arch.py
/petsc/config/PETSc/options/installDir.py
/petsc/config/configure.py
/petsc/config/examples/arch-cuda-double.py
/petsc/config/install.py
/petsc/include/petsc/private/dmimpl.h
/petsc/include/petsc/private/kernels/petscaxpy.h
/petsc/include/petsc/private/pcmgimpl.h
/petsc/include/petscdm.h
/petsc/include/petscpc.h
/petsc/lib/petsc/bin/maint/buildconfigtest
/petsc/lib/petsc/bin/maint/builddist
/petsc/lib/petsc/bin/maint/buildtest
/petsc/lib/petsc/bin/maint/findvisibleprivatefunctions
/petsc/lib/petsc/bin/maint/gcov.py
/petsc/lib/petsc/bin/maint/htmltemplate.py
/petsc/lib/petsc/bin/maint/runhtml.py
/petsc/lib/petsc/bin/maint/startnightly
/petsc/lib/petsc/bin/maint/startnightly.tao
/petsc/lib/petsc/conf/rules
/petsc/lib/petsc/conf/test
/petsc/makefile
/petsc/src/benchmarks/benchmarkBatch.py
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/forest/p4est/pforest.c
/petsc/src/dm/impls/plex/examples/tutorials/ex5.c
/petsc/src/dm/impls/plex/examples/tutorials/output/ex5_new_dm_view.out
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/shell/dmshell.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tao_tex/manual/cover.tex
/petsc/src/docs/tex/manual/developers.tex
/petsc/src/ksp/ksp/examples/tutorials/ex27.c
/petsc/src/ksp/ksp/examples/tutorials/output/ex27_2.out
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/mg/mgfunc.c
/petsc/src/snes/examples/tutorials/output/ex12_tri_bddc_parmetis.out
/petsc/src/snes/examples/tutorials/output/ex16_1.out
/petsc/src/snes/examples/tutorials/output/ex16_2.out
/petsc/src/snes/examples/tutorials/output/ex48_3.out
/petsc/src/snes/examples/tutorials/output/ex48_4.out
/petsc/src/snes/impls/fas/fas.c
/petsc/src/snes/impls/vi/rs/virs.c
/petsc/src/sys/classes/viewer/impls/binary/binv.c
/petsc/src/sys/classes/viewer/impls/draw/ftn-custom/zdrawvf.c
/petsc/src/sys/examples/tests/ex19.c
/petsc/src/sys/f90-mod/petscviewer.h
/petsc/src/sys/fileio/sysio.c
/petsc/src/tao/complementarity/examples/tutorials/output/minsurf1_2_alt.out
/petsc/src/tao/matrix/lmvmmat.c
/petsc/src/tao/matrix/lmvmmat.h
/petsc/src/tao/unconstrained/examples/tutorials/makefile
/petsc/src/tao/unconstrained/examples/tutorials/output/minsurf2_1.out
/petsc/src/tao/unconstrained/examples/tutorials/output/rosenbrock2_1.out
/petsc/src/tao/unconstrained/examples/tutorials/rosenbrock2.c
/petsc/src/tao/unconstrained/impls/lmvm/lmvm.c
is/sf/interface/sf.c
8015335406-Mar-2018 Vaclav Hapla <vaclav.hapla@erdw.ethz.ch>

PetscSFView: call PetscSFSetUp only if graph is set


/petsc/include/petsc/private/tsimpl.h
/petsc/include/petscmat.h
/petsc/include/petscts.h
/petsc/src/dm/impls/plex/examples/tutorials/ex5.c
/petsc/src/dm/impls/plex/examples/tutorials/output/ex5_new_dm_view.out
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/ts/examples/tutorials/ex20adj.c
/petsc/src/ts/examples/tutorials/ex20fwd.c
/petsc/src/ts/examples/tutorials/hybrid/ex1fwd.c
/petsc/src/ts/examples/tutorials/output/ex20fwd_1.out
/petsc/src/ts/examples/tutorials/output/ex20fwd_2.out
/petsc/src/ts/examples/tutorials/power_grid/ex3opt.c
/petsc/src/ts/examples/tutorials/power_grid/ex3sa.c
/petsc/src/ts/examples/tutorials/power_grid/makefile
/petsc/src/ts/examples/tutorials/power_grid/output/ex3sa_1.out
/petsc/src/ts/examples/tutorials/power_grid/output/ex3sa_2.out
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tsfwdsen.c
is/sf/interface/sf.c
713d6c5707-Mar-2018 Karl Rupp <me@karlrupp.net>

Merge branch 'pr838/haplav/haplav/feature-petscpartitionermatpartitioning-rb/master'

* pr838/haplav/haplav/feature-petscpartitionermatpartitioning-rb/master:
Implemented wrapper of MatPartitioning i

Merge branch 'pr838/haplav/haplav/feature-petscpartitionermatpartitioning-rb/master'

* pr838/haplav/haplav/feature-petscpartitionermatpartitioning-rb/master:
Implemented wrapper of MatPartitioning into PetscPartitioner.

show more ...


/petsc/include/petscdmplex.h
/petsc/include/petscis.h
/petsc/include/petscmat.h
/petsc/lib/petsc/bin/maint/buildtest
/petsc/src/dm/impls/plex/examples/tests/ex24.c
/petsc/src/dm/impls/plex/examples/tests/makefile
/petsc/src/dm/impls/plex/examples/tests/output/ex24_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex24_1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex24_3.out
/petsc/src/dm/impls/plex/examples/tests/output/ex24_4.out
/petsc/src/dm/impls/plex/makefile
/petsc/src/dm/impls/plex/petscpartmatpart.c
/petsc/src/dm/impls/plex/plexpartition.c
/petsc/src/dm/interface/dmregall.c
/petsc/src/mat/impls/adj/mpi/mpiadj.c
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/partition/impls/chaco/chaco.c
/petsc/src/mat/partition/impls/scotch/scotch.c
/petsc/src/mat/partition/partition.c
/petsc/src/snes/examples/tutorials/ex12.c
/petsc/src/snes/examples/tutorials/ex62.c
/petsc/src/snes/examples/tutorials/ex77.c
/petsc/src/snes/examples/tutorials/output/ex12_p4est_exact_q2_conformal_parallel_parmetis.out
/petsc/src/snes/examples/tutorials/output/ex12_p4est_exact_q2_nonconformal_parallel_parmetis.out
/petsc/src/snes/examples/tutorials/output/ex12_p4est_test_q2_conformal_parallel_parmetis.out
/petsc/src/snes/examples/tutorials/output/ex12_p4est_test_q2_nonconformal_parallel_parmetis.out
/petsc/src/snes/examples/tutorials/output/ex12_tri_bddc_parmetis.out
/petsc/src/snes/examples/tutorials/output/ex62_20_parmetis.out
is/is/utils/iscomp.c
is/utils/vsectionis.c
049452fa06-Mar-2018 Jed Brown <jed@jedbrown.org>

Vec: revert VecMDot and VecMAXPY intrinsics (producing incorrect results)

These had been added in 96e086a24b9cdc04c368e2851f46791dcaa837d7:

"Added case specific intrinsic kernels for VecMdot_Seq,

Vec: revert VecMDot and VecMAXPY intrinsics (producing incorrect results)

These had been added in 96e086a24b9cdc04c368e2851f46791dcaa837d7:

"Added case specific intrinsic kernels for VecMdot_Seq, VecMAXPY_Seq, and BAIJ bocksize 9 by 9"

show more ...


/petsc/config/BuildSystem/config/compilerOptions.py
/petsc/include/petsc/private/tsimpl.h
/petsc/include/petscts.h
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/ksp/ksp/examples/tutorials/ex10.c
/petsc/src/ksp/ksp/examples/tutorials/ex2.c
/petsc/src/ksp/ksp/examples/tutorials/output/ex2_sell_mumps.out
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/ksp/ksp/interface/iterativ.c
/petsc/src/ksp/pc/examples/tests/ex3.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/seq/superlu/superlu.c
/petsc/src/mat/impls/sell/seq/sell.c
/petsc/src/mat/impls/sell/seq/sell.h
/petsc/src/mat/impls/shell/shell.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tutorials/ex19.c
/petsc/src/snes/examples/tutorials/ex5.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/snes/utils/dmsnes.c
/petsc/src/tao/bound/examples/tutorials/output/plate2_1.out
/petsc/src/tao/bound/examples/tutorials/output/plate2_2.out
/petsc/src/tao/bound/examples/tutorials/output/plate2_3.out
/petsc/src/tao/bound/examples/tutorials/output/plate2_4.out
/petsc/src/tao/bound/examples/tutorials/output/plate2_5.out
/petsc/src/tao/bound/examples/tutorials/output/plate2_6.out
/petsc/src/tao/bound/examples/tutorials/output/plate2_7.out
/petsc/src/tao/bound/impls/blmvm/blmvm.c
/petsc/src/tao/bound/impls/bqpip/bqpip.c
/petsc/src/tao/bound/impls/gpcg/gpcg.c
/petsc/src/tao/bound/impls/tron/tron.c
/petsc/src/tao/complementarity/examples/tutorials/output/minsurf1_1.out
/petsc/src/tao/complementarity/examples/tutorials/output/minsurf1_2.out
/petsc/src/tao/complementarity/impls/asls/asfls.c
/petsc/src/tao/complementarity/impls/asls/asils.c
/petsc/src/tao/complementarity/impls/ssls/ssfls.c
/petsc/src/tao/complementarity/impls/ssls/ssils.c
/petsc/src/tao/constrained/impls/ipm/ipm.c
/petsc/src/tao/interface/taosolver.c
/petsc/src/tao/leastsquares/impls/pounders/pounders.c
/petsc/src/tao/linesearch/interface/taolinesearch.c
/petsc/src/tao/matrix/lmvmmat.c
/petsc/src/tao/pde_constrained/impls/lcl/lcl.c
/petsc/src/tao/unconstrained/examples/tutorials/output/minsurf2_1.out
/petsc/src/tao/unconstrained/examples/tutorials/output/minsurf2_2.out
/petsc/src/tao/unconstrained/examples/tutorials/output/minsurf2_3.out
/petsc/src/tao/unconstrained/impls/cg/taocg.c
/petsc/src/tao/unconstrained/impls/lmvm/lmvm.c
/petsc/src/tao/unconstrained/impls/nls/nls.c
/petsc/src/tao/unconstrained/impls/ntl/ntl.c
/petsc/src/tao/unconstrained/impls/ntr/ntr.c
/petsc/src/tao/unconstrained/impls/owlqn/owlqn.c
/petsc/src/ts/examples/tutorials/ex16adj.c
/petsc/src/ts/examples/tutorials/ex16opt_p.c
/petsc/src/ts/examples/tutorials/ex20adj.c
/petsc/src/ts/examples/tutorials/ex20fwd.c
/petsc/src/ts/examples/tutorials/ex20opt_p.c
/petsc/src/ts/examples/tutorials/hybrid/ex1adj.c
/petsc/src/ts/examples/tutorials/hybrid/ex1fwd.c
/petsc/src/ts/examples/tutorials/output/ex16opt_ic_1.out
/petsc/src/ts/examples/tutorials/output/ex16opt_p_1.out
/petsc/src/ts/examples/tutorials/output/ex20opt_ic_1.out
/petsc/src/ts/examples/tutorials/output/ex20opt_p_1.out
/petsc/src/ts/examples/tutorials/power_grid/ex3opt.c
/petsc/src/ts/examples/tutorials/power_grid/ex3sa.c
/petsc/src/ts/examples/tutorials/power_grid/ex9adj.c
/petsc/src/ts/examples/tutorials/power_grid/ex9opt.c
/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c
/petsc/src/ts/interface/makefile
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tssen.c
vec/impls/mpi/pvec2.c
vec/impls/seq/dvec2.c
0aaa36e105-Mar-2018 Barry Smith <bsmith@mcs.anl.gov>

Undo the commits that broke VecView_GLVis()

Commit-type: bug-fix


/petsc/include/petsc/private/tsimpl.h
/petsc/include/petscmat.h
/petsc/include/petscts.h
/petsc/src/dm/impls/da/gr2.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/dense/seq/dense.c
/petsc/src/ts/examples/tutorials/ex20adj.c
/petsc/src/ts/examples/tutorials/ex20fwd.c
/petsc/src/ts/examples/tutorials/hybrid/ex1fwd.c
/petsc/src/ts/examples/tutorials/output/ex20fwd_1.out
/petsc/src/ts/examples/tutorials/output/ex20fwd_2.out
/petsc/src/ts/examples/tutorials/power_grid/ex3opt.c
/petsc/src/ts/examples/tutorials/power_grid/ex3sa.c
/petsc/src/ts/examples/tutorials/power_grid/makefile
/petsc/src/ts/examples/tutorials/power_grid/output/ex3sa_1.out
/petsc/src/ts/examples/tutorials/power_grid/output/ex3sa_2.out
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tsfwdsen.c
vec/utils/vecglvis.c
6783bb9d05-Mar-2018 Karl Rupp <me@karlrupp.net>

Merge branch 'pr871/acroucher/acroucher/dmplex-hdf5-vecview/master'

* pr871/acroucher/acroucher/dmplex-hdf5-vecview/master:
Two fixes to prevent HDF5 DMPlex VecView crashing when one process has no

Merge branch 'pr871/acroucher/acroucher/dmplex-hdf5-vecview/master'

* pr871/acroucher/acroucher/dmplex-hdf5-vecview/master:
Two fixes to prevent HDF5 DMPlex VecView crashing when one process has no cells.

show more ...


/petsc/config/BuildSystem/config/packages/exodusii.py
/petsc/config/BuildSystem/config/packages/pnetcdf.py
/petsc/config/install.py
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexexodusii.c
/petsc/src/dm/interface/dm.c
vec/interface/rvector.c
912b966705-Mar-2018 Jed Brown <jed@jedbrown.org>

dvec2: fix tons of _mm256_store_pd to unaligned addresses


/petsc/config/install.py
/petsc/include/makefile
/petsc/include/petscsys.h
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexexodusii.c
/petsc/src/dm/impls/plex/plexhdf5.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/ksp/examples/tutorials/ex52.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/mat/examples/tests/ex192.c
/petsc/src/mat/examples/tests/ex72.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tutorials/ex10d/ex10.c
/petsc/src/snes/examples/tutorials/ex12.c
/petsc/src/snes/examples/tutorials/ex69.c
/petsc/src/snes/interface/noise/snesmfj2.c
/petsc/src/snes/interface/snes.c
/petsc/src/sys/classes/bag/bag.c
/petsc/src/sys/classes/draw/interface/drawreg.c
/petsc/src/sys/classes/draw/interface/dsave.c
/petsc/src/sys/classes/draw/utils/image.c
/petsc/src/sys/classes/matlabengine/matlab.c
/petsc/src/sys/classes/viewer/impls/ascii/filev.c
/petsc/src/sys/classes/viewer/impls/binary/binv.c
/petsc/src/sys/dll/dl.c
/petsc/src/sys/dll/reg.c
/petsc/src/sys/fileio/fdir.c
/petsc/src/sys/fileio/fpath.c
/petsc/src/sys/fileio/grpath.c
/petsc/src/sys/objects/options.c
/petsc/src/sys/utils/pdisplay.c
/petsc/src/sys/utils/str.c
/petsc/src/sys/webclient/client.c
/petsc/src/tao/constrained/examples/tutorials/maros.c
vec/impls/seq/dvec2.c
2200b9de02-Mar-2018 Barry Smith <bsmith@mcs.anl.gov>

object management for case where the viewer does not keep object in a link list so should destroy it immediately.

Commit-type: bug-fix
Reported-by: nightly tests


/petsc/config/examples/arch-mswin-gnu.py
/petsc/config/install.py
/petsc/lib/petsc/conf/test
/petsc/src/dm/impls/da/gr2.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/docs/website/documentation/changes/38.html
/petsc/src/mat/examples/tests/ex218.c
/petsc/src/ts/examples/tutorials/ex11.c
vec/utils/vecglvis.c
9fe25b6e28-Feb-2018 Karl Rupp <me@karlrupp.net>

Merge branch 'karlrupp/fix-public-access-cublas-handle'

* karlrupp/fix-public-access-cublas-handle:
Provides the ability to access the CUBLAS handle used inside of PETSc.

Thanks to: Jose Roman <j

Merge branch 'karlrupp/fix-public-access-cublas-handle'

* karlrupp/fix-public-access-cublas-handle:
Provides the ability to access the CUBLAS handle used inside of PETSc.

Thanks to: Jose Roman <jroman@dsic.upv.es>
Alejandro Lamas Davina <alejandro.lamas@dsic.upv.es>

show more ...


/petsc/include/petsccuda.h
/petsc/include/petsccusp.h
vec/impls/seq/seqcuda/veccuda.c
vec/impls/seq/seqcusp/veccusp2.cu
7b3c4b8328-Feb-2018 Karl Rupp <me@karlrupp.net>

Merge branch 'jose/cuda-tests'

* jose/cuda-tests: Fix CUDA-related tests in new test harness. See PR #848.


/petsc/src/ksp/ksp/examples/tests/ex43.c
/petsc/src/ksp/ksp/examples/tutorials/ex1.c
/petsc/src/ksp/ksp/examples/tutorials/ex46.c
/petsc/src/ksp/ksp/examples/tutorials/ex7.c
/petsc/src/mat/examples/tests/ex2.c
/petsc/src/mat/examples/tests/ex5.c
/petsc/src/mat/impls/aij/mpi/mpicusp/mpiaijcusp.cu
/petsc/src/ts/examples/tutorials/output/ex18_adv_0.out
vec/impls/mpi/mpicusp/mpicusp.cu
00467d5f27-Feb-2018 Barry Smith <bsmith@mcs.anl.gov>

Merge branch 'pr862/dkokron/IntelIntrinsicsForBAIJ9by9MDotMaxpy/maint'


/petsc/config/PETSc/Configure.py
/petsc/include/petsc/private/pcimpl.h
/petsc/lib/petsc/bin/petsclogformat.py
/petsc/src/docs/website/index.html
/petsc/src/ksp/ksp/interface/dlregisksp.c
/petsc/src/ksp/pc/impls/bjacobi/bjacobi.c
/petsc/src/ksp/pc/impls/composite/composite.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/baij/seq/baij.h
/petsc/src/mat/impls/baij/seq/baij2.c
/petsc/src/mat/impls/baij/seq/baijfact2.c
/petsc/src/mat/impls/baij/seq/baijfact3.c
/petsc/src/mat/impls/baij/seq/baijfact81.c
/petsc/src/mat/impls/baij/seq/dgefa2.c
/petsc/src/mat/impls/baij/seq/makefile
/petsc/src/mat/interface/dlregismat.c
/petsc/src/snes/examples/tutorials/ex77.c
/petsc/src/ts/examples/tutorials/output/ex18_adv_1.out
/petsc/src/ts/examples/tutorials/output/ex18_adv_3_ex.out
/petsc/src/ts/impls/pseudo/posindep.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tsreg.c
vec/impls/mpi/pvec2.c
vec/impls/seq/dvec2.c
532f2c2f26-Feb-2018 Karl Rupp <me@karlrupp.net>

CUSP: Fixed failure of KSP tutorial ex7 and test ex43 in nightly tests.


/petsc/src/dm/label/examples/tutorials/ex1f90.F90
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/ksp/ksp/examples/tests/ex43.c
/petsc/src/ksp/ksp/examples/tutorials/ex1.c
/petsc/src/ksp/ksp/examples/tutorials/ex46.c
/petsc/src/ksp/ksp/examples/tutorials/ex7.c
/petsc/src/mat/color/impls/greedy/greedy.c
/petsc/src/mat/color/impls/minpack/color.c
/petsc/src/mat/color/interface/matcoloring.c
/petsc/src/mat/examples/tests/ex2.c
/petsc/src/mat/examples/tests/ex5.c
/petsc/src/mat/impls/aij/mpi/csrperm/mpicsrperm.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpicusp/mpiaijcusp.cu
/petsc/src/mat/impls/aij/seq/aij.c
vec/impls/mpi/mpicusp/mpicusp.cu
1828ab9126-Feb-2018 Stefano Zampini <stefano.zampini@gmail.com>

Merge remote-tracking branch 'origin/maint' into stefano_zampini/fix-matis-dmda-l2g


/petsc/bitbucket-pipelines.yml
/petsc/config/PETSc/Configure.py
/petsc/src/dm/impls/da/fdda.c
/petsc/src/dm/impls/da/grglvis.c
/petsc/src/ksp/ksp/examples/tutorials/ex42.c
/petsc/src/ksp/ksp/examples/tutorials/ex43.c
/petsc/src/ksp/ksp/examples/tutorials/ex49.c
/petsc/src/ksp/ksp/examples/tutorials/ex70.c
/petsc/src/ksp/ksp/examples/tutorials/ex71.c
/petsc/src/ksp/ksp/examples/tutorials/output/ex42_bddc_stokes.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex42_bddc_stokes_deluxe.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex42_bddc_stokes_subdomainjump_deluxe.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex43_bddc_stokes_deluxe.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex43_bddc_stokes_subdomainjump_deluxe.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_both_approx.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_dir_approx.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_bddc_elast_neu_approx.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_dmda_matis_elast_2d.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_dmda_matis_elast_3d.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_dmda_matis_poiss_2d.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex71_dmda_matis_poiss_3d.out
/petsc/src/ksp/ksp/impls/tsirm/tsirm.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddc.h
/petsc/src/ksp/pc/impls/bddc/bddcgraph.c
/petsc/src/ksp/pc/impls/bddc/bddcnullspace.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.h
/petsc/src/ksp/pc/impls/bddc/bddcschurs.c
/petsc/src/ksp/pc/impls/bddc/bddcstructs.h
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/impls/is/matis.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/examples/tutorials/ex12.c
/petsc/src/snes/examples/tutorials/ex62.c
/petsc/src/snes/examples/tutorials/output/ex12_quad_bddc.out
/petsc/src/snes/examples/tutorials/output/ex62_bddc_quad.out
/petsc/src/snes/impls/tr/tr.c
/petsc/src/sys/classes/viewer/impls/glvis/glvis.c
/petsc/src/ts/examples/tutorials/ex12.c
vec/impls/mpi/pdvec.c
vec/impls/seq/bvec2.c
83e0d78926-Feb-2018 Stefano Zampini <stefano.zampini@gmail.com>

Vec: added test for VecSetValuesBlocked with negative indices


vec/examples/tests/ex15.c
vec/examples/tests/ex16.c
vec/examples/tests/output/ex15_1.out
vec/examples/tests/output/ex16_1.out
355f477926-Feb-2018 Stefano Zampini <stefano.zampini@gmail.com>

Merge remote-tracking branch 'origin/maint'


/petsc/bitbucket-pipelines.yml
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/MPI.py
/petsc/config/BuildSystem/config/packages/petsc4py.py
/petsc/config/BuildSystem/config/packages/sowing.py
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/options/petscclone.py
/petsc/config/PETSc/options/petscdir.py
/petsc/config/configure.py
/petsc/config/examples/arch-mswin-borland.py
/petsc/config/examples/arch-mswin-cxx-cmplx.py
/petsc/config/examples/arch-mswin.py
/petsc/config/gmakegentest.py
/petsc/config/install.py
/petsc/config/testparse.py
/petsc/include/petscsys.h
/petsc/lib/petsc/bin/PetscBinaryIO.py
/petsc/lib/petsc/bin/PetscBinaryIOTrajectory.py
/petsc/lib/petsc/bin/PetscBinaryIO_tests.py
/petsc/lib/petsc/bin/maint/PetscStaticFunctionCandidates.py
/petsc/lib/petsc/bin/maint/bk2darcs.py
/petsc/lib/petsc/bin/maint/bk2hg.py
/petsc/lib/petsc/bin/maint/branches.py
/petsc/lib/petsc/bin/maint/bugReport.py
/petsc/lib/petsc/bin/maint/buildconfigtest
/petsc/lib/petsc/bin/maint/builddist
/petsc/lib/petsc/bin/maint/buildremotes
/petsc/lib/petsc/bin/maint/buildtest
/petsc/lib/petsc/bin/maint/buildtest.py
/petsc/lib/petsc/bin/maint/checkBuilds.py
/petsc/lib/petsc/bin/maint/checkloc.py
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/petsc/lib/petsc/bin/maint/convertExamples.py
/petsc/lib/petsc/bin/maint/convertExamplesUtils.py
/petsc/lib/petsc/bin/maint/copylognightly
/petsc/lib/petsc/bin/maint/copylognightly.tao
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/petsc/lib/petsc/bin/maint/countpetsccits.py
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/petsc/lib/petsc/bin/maint/dos/makecpp.tcl
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/petsc/lib/petsc/bin/maint/dos/req.mak
/petsc/lib/petsc/bin/maint/dos/rules_win32
/petsc/lib/petsc/bin/maint/download-count.sh
/petsc/lib/petsc/bin/maint/examplesMkParse.py
/petsc/lib/petsc/bin/maint/examplesWalker.py
/petsc/lib/petsc/bin/maint/exampleslog.py
/petsc/lib/petsc/bin/maint/findbadfiles
/petsc/lib/petsc/bin/maint/findvisibleprivatefunctions
/petsc/lib/petsc/bin/maint/fixinclude
/petsc/lib/petsc/bin/maint/gcov.py
/petsc/lib/petsc/bin/maint/generateetags.py
/petsc/lib/petsc/bin/maint/generatefortranstubs.py
/petsc/lib/petsc/bin/maint/generators/c++.py
/petsc/lib/petsc/bin/maint/generators/d.py
/petsc/lib/petsc/bin/maint/generators/java.py
/petsc/lib/petsc/bin/maint/generators/matlab.py
/petsc/lib/petsc/bin/maint/generators/prettyprint.py
/petsc/lib/petsc/bin/maint/getexlist
/petsc/lib/petsc/bin/maint/getinterfaces.py
/petsc/lib/petsc/bin/maint/getpdflabels.py
/petsc/lib/petsc/bin/maint/helpindex.py
/petsc/lib/petsc/bin/maint/hosts.local
/petsc/lib/petsc/bin/maint/hosts.solaris
/petsc/lib/petsc/bin/maint/htmltemplate.py
/petsc/lib/petsc/bin/maint/jenkins/jenkins_configure.sh
/petsc/lib/petsc/bin/maint/jenkins/jenkins_make.sh
/petsc/lib/petsc/bin/maint/jenkins/jenkins_test.sh
/petsc/lib/petsc/bin/maint/killnightly
/petsc/lib/petsc/bin/maint/latexinexamples.py
/petsc/lib/petsc/bin/maint/lex.py
/petsc/lib/petsc/bin/maint/mapnameslatex.py
/petsc/lib/petsc/bin/maint/normalizeOutput.py
/petsc/lib/petsc/bin/maint/petsc-val.supp
/petsc/lib/petsc/bin/maint/petscgoto
/petsc/lib/petsc/bin/maint/rebuildtar
/petsc/lib/petsc/bin/maint/runhtml.py
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/petsc/lib/petsc/bin/maint/testharness_util.py
/petsc/lib/petsc/bin/maint/toclapack.sh
/petsc/lib/petsc/bin/maint/update-docs.py
/petsc/lib/petsc/bin/maint/wwwindex.py
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/petsc/lib/petsc/bin/maint/zapall
/petsc/lib/petsc/bin/petsc-mpiexec.uni
/petsc/lib/petsc/bin/petsc_conf.py
/petsc/lib/petsc/bin/petsc_gen_xdmf.py
/petsc/lib/petsc/bin/petscdiff
/petsc/lib/petsc/bin/petsclogformat.py
/petsc/lib/petsc/bin/petscmpiexec
/petsc/lib/petsc/bin/petscnagupgrade.py
/petsc/lib/petsc/bin/saws/SAWs.py
/petsc/lib/petsc/bin/saws/getSAWs.bash
/petsc/lib/petsc/bin/saws/getStack.bash
/petsc/lib/petsc/bin/taucc.py
/petsc/lib/petsc/bin/win32fe/win32fe.exe
/petsc/lib/petsc/bin/win32fe/win32feutils.dll
/petsc/lib/petsc/conf/rules
/petsc/lib/petsc/conf/uncrustify.cfg
/petsc/makefile
/petsc/src/docs/tex/manual/developers.tex
/petsc/src/docs/tex/manual/makefile
/petsc/src/docs/tex/manual/manualpreamble.tex
/petsc/src/docs/tex/manual/part1.tex
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/download/petsc-patches.html
/petsc/src/docs/website/miscellaneous/petscthreads.html
/petsc/src/ksp/ksp/examples/tutorials/ex60.c
/petsc/src/ksp/ksp/impls/tsirm/tsirm.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/impls/shell/shell.c
/petsc/src/snes/impls/tr/tr.c
/petsc/src/sys/examples/tests/makefile
/petsc/src/sys/mpiuni/makefile
/petsc/src/sys/utils/makefile
/petsc/src/ts/interface/ts.c
/petsc/src/ts/trajectory/impls/visualization/trajvisualization.c
vec/impls/mpi/pdvec.c
vec/impls/seq/bvec2.c
60a182d626-Feb-2018 Stefano Zampini <stefano.zampini@gmail.com>

fix bug in VecSetValuesBlocked_{MPI|Seq} for negative indices


/petsc/bitbucket-pipelines.yml
/petsc/config/BuildSystem/script.py
/petsc/config/PETSc/Configure.py
/petsc/include/petsc/finclude/petscksp.h
/petsc/include/petsc/private/matimpl.h
/petsc/src/ksp/ksp/impls/fetidp/fetidp.c
/petsc/src/ksp/ksp/impls/tsirm/tsirm.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcscalingbasic.c
/petsc/src/ksp/pc/impls/bddc/bddcschurs.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/examples/tests/ex23.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c
/petsc/src/mat/impls/is/matis.c
/petsc/src/mat/impls/shell/shell.c
/petsc/src/mat/interface/matrix.c
/petsc/src/snes/impls/tr/tr.c
vec/impls/mpi/pdvec.c
vec/impls/seq/bvec2.c
5ca5d0dd25-Feb-2018 Karl Rupp <me@karlrupp.net>

CUDA: Fix includes for PetscCUBLASGetHandle()

Extern visibility was not ensured with the previous move of
the PetscCUBLASGetHandle() declaration to the public header.


/petsc/include/petsccuda.h
/petsc/include/petsccusp.h
vec/impls/seq/seqcuda/veccuda.c
vec/impls/seq/seqcusp/veccusp2.cu
2a86a7ca25-Feb-2018 Barry Smith <bsmith@mcs.anl.gov>

update #define conditions used to turn on Intel intrinsics

Commit-type: portability-fix, style-fix


/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/baij/seq/baij.h
/petsc/src/mat/impls/baij/seq/baij2.c
/petsc/src/mat/impls/baij/seq/baijfact2.c
/petsc/src/mat/impls/baij/seq/baijfact3.c
/petsc/src/mat/impls/baij/seq/baijfact81.c
vec/impls/seq/dvec2.c
beb4d3b523-Feb-2018 Hong Zhang <hzhang@mcs.anl.gov>

fix remaining build warning


vec/impls/node/vecnode.c
8e60766722-Feb-2018 Hong Zhang <hzhang@mcs.anl.gov>

fix warnings reported from regression tests


/petsc/src/mat/examples/tests/ex134.c
vec/impls/node/vecnode.c
vscat/impls/vpscat.c
vscat/impls/vscat.c
96e086a212-Feb-2018 Daniel Kokron <Daniel.Kokron@nasa.gov>

Added case specific intrinsic kernels for VecMdot_Seq, VecMAXPY_Seq, and BAIJ bocksize 9 by 9


/petsc/config/BuildSystem/script.py
/petsc/include/petsc/finclude/petscksp.h
/petsc/include/petsc/private/matimpl.h
/petsc/src/ksp/ksp/impls/fetidp/fetidp.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddcprivate.c
/petsc/src/ksp/pc/impls/bddc/bddcscalingbasic.c
/petsc/src/ksp/pc/impls/bddc/bddcschurs.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/examples/tests/ex23.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/baij/seq/baij.h
/petsc/src/mat/impls/baij/seq/baij2.c
/petsc/src/mat/impls/baij/seq/baijfact2.c
/petsc/src/mat/impls/baij/seq/baijfact3.c
/petsc/src/mat/impls/baij/seq/baijfact81.c
/petsc/src/mat/impls/baij/seq/dgefa2.c
/petsc/src/mat/impls/baij/seq/makefile
/petsc/src/mat/impls/is/matis.c
/petsc/src/mat/impls/shell/shell.c
/petsc/src/mat/interface/matrix.c
vec/impls/mpi/pvec2.c
vec/impls/seq/dvec2.c
dbda1d2322-Feb-2018 Hong Zhang <hzhang@mcs.anl.gov>

fix build warnings


vec/impls/node/vecnode.c
vscat/examples/ex2.c
vscat/examples/ex3.c
vscat/impls/vpscat.c
6894f68122-Feb-2018 Adrian Croucher <a.croucher@auckland.ac.nz>

Don't compute block size if local size is zero


/petsc/bin/maint/buildtest
/petsc/bin/maint/confignightly/cg
/petsc/bin/maint/confignightly/cg2
/petsc/bin/maint/confignightly/cg3
/petsc/bin/maint/confignightly/cg4
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/petsc/bin/maint/confignightly/crush2
/petsc/bin/maint/confignightly/crush3
/petsc/bin/maint/confignightly/default
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/petsc/bin/maint/killnightly
/petsc/bin/maint/runhtml.py
/petsc/bin/maint/startnightly
/petsc/config/petsc_harness.sh
/petsc/config/report_tests.py
/petsc/gmakefile
/petsc/gmakefile.test
/petsc/include/petsc/private/tsimpl.h
/petsc/include/petscgll.h
/petsc/include/petscmat.h
/petsc/include/petscts.h
/petsc/src/dm/impls/plex/plex.c
/petsc/src/docs/tex/manual/developers.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/mat/examples/tests/ex126f.F
/petsc/src/mat/examples/tests/ex214.c
/petsc/src/mat/examples/tests/ex218.c
/petsc/src/mat/examples/tests/ex23.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/examples/tests/output/ex214_1.out
/petsc/src/mat/examples/tests/output/ex214_2.out
/petsc/src/mat/examples/tests/output/ex218_1.out
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/is/matis.c
/petsc/src/mat/impls/shell/shell.c
/petsc/src/mat/utils/axpy.c
/petsc/src/sys/classes/gll/petscgll.c
/petsc/src/tao/unconstrained/examples/tutorials/output/burgers_spectral_2.out
/petsc/src/ts/examples/tutorials/ex16adj.c
/petsc/src/ts/examples/tutorials/ex16opt_ic.c
/petsc/src/ts/examples/tutorials/ex50.c
/petsc/src/ts/examples/tutorials/output/ex16opt_ic_2.out
/petsc/src/ts/examples/tutorials/output/ex50_1.out
/petsc/src/ts/interface/ts.c
vec/interface/rvector.c
74c49ccc21-Feb-2018 Hong Zhang <hzhang@mcs.anl.gov>

bugfix for '--with-mpi=0'


/petsc/src/tao/leastsquares/examples/tutorials/chwirut2.c
vec/impls/node/vecnode.c
vec/impls/node/vecnodeimpl.h
vec/interface/vecregall.c
vscat/impls/vscat.c
vscat/interface/vscreate.c

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