vec - OpenGrok history log for /petsc/src/vec

Revision	Date	Author	Comments (<<< Hide modified files) (Show modified files >>>)
fc7e9089	28-Jan-2015	Barry Smith <bsmith@mcs.anl.gov>	fix in #define version of function name /petsc/bin/petsc-pythonscripts/PetscBinaryIO.py /petsc/include/petsc-finclude/petscdt.h90 /petsc/include/petscdmredundant.h /petsc/include/petscsnes.h /petsc/src/dm/impls/composite/pack.c /petsc/src/dm/impls/da/dacorn.c /petsc/src/dm/impls/da/dageometry.c /petsc/src/dm/impls/plex/plexgmsh.c /petsc/src/dm/impls/redundant/dmredundant.c /petsc/src/dm/interface/dm.c /petsc/src/docs/tex/petsc.bib /petsc/src/docs/tex/petscapp.bib /petsc/src/ksp/ksp/examples/tests/ex21.c /petsc/src/ksp/ksp/interface/itcl.c /petsc/src/ksp/pc/impls/bjacobi/bjacobi.c /petsc/src/ksp/pc/impls/hypre/hypre.c /petsc/src/ksp/pc/interface/precon.c /petsc/src/snes/examples/tutorials/makefile /petsc/src/snes/linesearch/interface/linesearch.c /petsc/src/sys/classes/viewer/impls/binary/binv.c vec/impls/seq/seqviennacl/vecviennacl.cxx
49cfb1d6	27-Jan-2015	Barry Smith <bsmith@mcs.anl.gov>	fix PetscObjectSetFromOptions_ViennaCL() to PetscObjectViennaCLSetFromOptions() /petsc/include/petsc-private/dmimpl.h /petsc/include/petsc-private/pcgamgimpl.h /petsc/include/petscdm.h /petsc/src/dm/examples/tests/ex21.c /petsc/src/dm/impls/da/da.c /petsc/src/dm/impls/da/dacreate.c /petsc/src/dm/impls/da/dainterp.c /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/plex/plexcreate.c /petsc/src/dm/interface/dm.c /petsc/src/docs/tex/manual/part2.tex /petsc/src/docs/tex/petsc.bib /petsc/src/docs/tex/petscapp.bib /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/pc/impls/gamg/gamg.c /petsc/src/mat/examples/tests/ex99.c /petsc/src/mat/impls/aij/seq/seqviennacl/aijviennacl.cxx /petsc/src/snes/impls/fas/fas.c /petsc/src/snes/impls/vi/rs/virs.c vec/impls/seq/seqviennacl/vecviennacl.cxx vec/impls/seq/seqviennacl/viennaclvecimpl.h
7f9e0b0a	26-Jan-2015	Barry Smith <bsmith@mcs.anl.gov>	Merge branch 'karpeev/fix-ksp-matgetschurcomplement-pmatreuse' into barry/experiment Conflicts: src/ksp/ksp/utils/schurm.c /petsc/bin/maint/generatefortranstubs.py /petsc/bin/maint/wwwindex.py /petsc/config/BuildSystem/config/packages/sowing.py /petsc/config/PETSc/Configure.py /petsc/include/petsc-private/vecimpl.h /petsc/include/petscksp.h /petsc/include/petscsys.h /petsc/include/petscvec.h /petsc/lib/petsc-conf/bfort-base.txt /petsc/lib/petsc-conf/bfort-mpi.txt /petsc/lib/petsc-conf/bfort-petsc.txt /petsc/src/contrib/fun3d/comp/flow.c /petsc/src/dm/impls/composite/pack.c /petsc/src/dm/impls/da/dagtol.c /petsc/src/dm/impls/moab/dmmoab.cxx /petsc/src/dm/impls/redundant/dmredundant.c /petsc/src/dm/interface/dm.c /petsc/src/dm/makefile /petsc/src/ksp/ksp/examples/tests/ex21.c /petsc/src/ksp/ksp/examples/tutorials/ex52.c /petsc/src/ksp/ksp/impls/fcg/fcg.c /petsc/src/ksp/ksp/utils/schurm.c /petsc/src/ksp/pc/impls/bjacobi/bjacobi.c /petsc/src/ksp/pc/impls/gamg/gamg.c /petsc/src/ksp/pc/impls/hypre/hypre.c /petsc/src/ksp/pc/interface/precon.c /petsc/src/mat/impls/aij/mpi/mkl_cpardiso/mkl_cpardiso.c /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c /petsc/src/snes/impls/composite/snescomposite.c /petsc/src/snes/interface/snesob.c /petsc/src/sys/classes/matlabengine/matlab.c /petsc/src/sys/webclient/box.c /petsc/src/sys/webclient/globus.c /petsc/src/sys/webclient/google.c /petsc/src/sys/webclient/textbelt.c /petsc/src/tao/linesearch/impls/gpcglinesearch/gpcglinesearch.c /petsc/src/ts/characteristic/interface/slregis.c vec/impls/seq/seqcusp/cuspvecimpl.h vec/impls/seq/seqcusp/veccusp.cu vec/interface/rvector.c /petsc/tutorials/HandsOnExercise.html
33263987	25-Jan-2015	Barry Smith <bsmith@mcs.anl.gov>	Manual merge since I removed hypre euclid and stefno added ams Merge branch 'stefano_zampini/hypre-ams' into barry/experiment Conflicts: include/petscpc.h src/ksp/pc/impls/hypre/hypre.c /petsc/include/petsc-private/pcgamgimpl.h /petsc/include/petscpc.h /petsc/src/dm/impls/da/hypre/mhyp.c /petsc/src/dm/impls/da/hypre/mhyp.h /petsc/src/ksp/pc/impls/hypre/hypre.c vec/impls/hypre/vhyp.c
584b3052	24-Jan-2015	Barry Smith <bsmith@mcs.anl.gov>	Merge branch 'tisaac/feature-gamg-extensible' into barry/experiment Conflicts: src/ksp/pc/impls/gamg/gamg.h /petsc/bin/maint/buildtest /petsc/bin/maint/generatefortranstubs.py /petsc/bin/petsc-pythonscripts/petsc_gen_xdmf.py /petsc/config/BuildSystem/config/packages/ctetgen.py /petsc/config/BuildSystem/config/packages/f2cblaslapack.py /petsc/config/builder.py /petsc/config/gmakegen.py /petsc/config/install.py /petsc/gmakefile /petsc/include/petsc-private/pcgamgimpl.h /petsc/include/petsc-private/pcmgimpl.h /petsc/include/petsc-private/petscfeimpl.h /petsc/include/petsc-private/petscfvimpl.h /petsc/include/petsc.h /petsc/include/petscdmplex.h /petsc/include/petscds.h /petsc/include/petscdt.h /petsc/include/petscfe.h /petsc/include/petscfv.h /petsc/include/petscpc.h /petsc/include/petscsnes.h /petsc/include/petscts.h /petsc/makefile /petsc/setup.py /petsc/src/dm/dt/interface/dt.c /petsc/src/dm/dt/interface/dtds.c /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/dt/interface/dtfv.c /petsc/src/dm/impls/plex/examples/tests/ex1.c /petsc/src/dm/impls/plex/ftn-custom/makefile /petsc/src/dm/impls/plex/ftn-custom/zplexgmsh.c /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/plex/plexcreate.c /petsc/src/dm/impls/plex/plexdistribute.c /petsc/src/dm/impls/plex/plexexodusii.c /petsc/src/dm/impls/plex/plexfem.c /petsc/src/dm/impls/plex/plexgenerate.c /petsc/src/dm/impls/plex/plexgeometry.c /petsc/src/dm/impls/plex/plexgmsh.c /petsc/src/dm/impls/plex/plexhdf5.c /petsc/src/dm/impls/plex/plexlabel.c /petsc/src/dm/impls/plex/plexpoint.c /petsc/src/dm/impls/plex/plexrefine.c /petsc/src/dm/impls/plex/plexsubmesh.c /petsc/src/dm/interface/dm.c /petsc/src/docs/tex/petsc.bib /petsc/src/docs/tex/petscapp.bib /petsc/src/ksp/ksp/examples/tutorials/makefile /petsc/src/ksp/ksp/examples/tutorials/output/ex54_1.out /petsc/src/ksp/ksp/examples/tutorials/output/ex54_classical.out /petsc/src/ksp/ksp/examples/tutorials/output/ex54f.out /petsc/src/ksp/ksp/examples/tutorials/output/ex55_0.out /petsc/src/ksp/ksp/examples/tutorials/output/ex55_NC.out /petsc/src/ksp/ksp/examples/tutorials/output/ex55_classical.out /petsc/src/ksp/ksp/examples/tutorials/output/ex55_sa.out /petsc/src/ksp/ksp/examples/tutorials/output/ex56_0.out /petsc/src/ksp/ksp/examples/tutorials/output/ex56_nns.out /petsc/src/ksp/pc/impls/gamg/agg.c /petsc/src/ksp/pc/impls/gamg/gamg.c /petsc/src/ksp/pc/impls/gamg/gamg.h /petsc/src/ksp/pc/impls/mg/fmg.c /petsc/src/ksp/pc/impls/mg/ftn-custom/zmgfuncf.c /petsc/src/ksp/pc/impls/mg/mg.c /petsc/src/ksp/pc/impls/mg/mgfunc.c /petsc/src/ksp/pc/impls/mg/smg.c /petsc/src/ksp/pc/impls/ml/ml.c /petsc/src/ksp/pc/impls/wb/wb.c /petsc/src/mat/examples/tests/ex173.c /petsc/src/mat/examples/tests/makefile /petsc/src/mat/examples/tests/output/ex173_1.out /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/baij/mpi/mpibaij.c /petsc/src/mat/impls/baij/seq/baij.c /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c /petsc/src/mat/impls/sbaij/seq/sbaij.c /petsc/src/mat/interface/matrix.c /petsc/src/snes/examples/tutorials/ex12.c /petsc/src/snes/examples/tutorials/ex62.c /petsc/src/snes/examples/tutorials/output/ex62_10.out /petsc/src/snes/examples/tutorials/output/ex62_11.out /petsc/src/snes/examples/tutorials/output/ex62_12.out /petsc/src/snes/examples/tutorials/output/ex62_13.out /petsc/src/snes/examples/tutorials/output/ex62_14.out /petsc/src/snes/examples/tutorials/output/ex62_15.out /petsc/src/snes/examples/tutorials/output/ex62_16.out /petsc/src/snes/examples/tutorials/output/ex62_17.out /petsc/src/snes/examples/tutorials/output/ex62_18.out /petsc/src/snes/examples/tutorials/output/ex62_19.out /petsc/src/snes/examples/tutorials/output/ex62_20.out /petsc/src/snes/examples/tutorials/output/ex62_21.out /petsc/src/snes/examples/tutorials/output/ex62_22.out /petsc/src/snes/examples/tutorials/output/ex62_23.out /petsc/src/snes/examples/tutorials/output/ex62_24.out /petsc/src/snes/examples/tutorials/output/ex62_25.out /petsc/src/snes/examples/tutorials/output/ex62_26.out /petsc/src/snes/examples/tutorials/output/ex62_27.out /petsc/src/snes/examples/tutorials/output/ex62_28.out /petsc/src/snes/examples/tutorials/output/ex62_29.out /petsc/src/snes/examples/tutorials/output/ex62_30.out /petsc/src/snes/examples/tutorials/output/ex62_31.out /petsc/src/snes/examples/tutorials/output/ex62_32.out /petsc/src/snes/examples/tutorials/output/ex62_33.out /petsc/src/snes/examples/tutorials/output/ex62_34.out /petsc/src/snes/examples/tutorials/output/ex62_35.out /petsc/src/snes/examples/tutorials/output/ex62_36.out /petsc/src/snes/examples/tutorials/output/ex62_7.out /petsc/src/snes/examples/tutorials/output/ex62_8.out /petsc/src/snes/examples/tutorials/output/ex62_quad_q2p1_full.out /petsc/src/snes/examples/tutorials/output/ex62_quad_q2q1_full.out /petsc/src/snes/interface/snes.c /petsc/src/snes/utils/dmplexsnes.c /petsc/src/sys/objects/pname.c /petsc/src/ts/examples/tutorials/ex11.c /petsc/src/ts/examples/tutorials/ex18.c /petsc/src/ts/examples/tutorials/output/ex11_10.out /petsc/src/ts/examples/tutorials/output/ex18_adv_0.out /petsc/src/ts/examples/tutorials/output/ex18_adv_1.out /petsc/src/ts/examples/tutorials/output/ex18_adv_2.out /petsc/src/ts/examples/tutorials/output/ex18_p1p1.out /petsc/src/ts/examples/tutorials/output/ex18_p1p1_xper.out /petsc/src/ts/examples/tutorials/output/ex18_p1p1_xper_ref.out /petsc/src/ts/examples/tutorials/output/ex18_p1p1_xyper.out /petsc/src/ts/examples/tutorials/output/ex18_p1p1_xyper_ref.out /petsc/src/ts/examples/tutorials/output/ex18_p2p1.out /petsc/src/ts/examples/tutorials/output/ex18_p2p1_xyper.out /petsc/src/ts/examples/tutorials/output/ex18_p2p1_xyper_ref.out /petsc/src/ts/utils/dmplexts.c is/sf/interface/sf.c
8c34d3f5	20-Jan-2015	Barry Smith <bsmith@mcs.anl.gov>	simplify option object names /petsc/config/BuildSystem/config/packages/openmp.py /petsc/config/BuildSystem/config/packages/openmpclasses.py /petsc/config/PETSc/options/libraryOptions.py /petsc/include/petsc-private/dmimpl.h /petsc/include/petsc-private/kspimpl.h /petsc/include/petsc-private/linesearchimpl.h /petsc/include/petsc-private/matimpl.h /petsc/include/petsc-private/pcimpl.h /petsc/include/petsc-private/petscfeimpl.h /petsc/include/petsc-private/sfimpl.h /petsc/include/petsc-private/snesimpl.h /petsc/include/petsc-private/taoimpl.h /petsc/include/petsc-private/taolinesearchimpl.h /petsc/include/petsc-private/tsimpl.h /petsc/include/petsc-private/vecimpl.h /petsc/include/petsc-private/viewerimpl.h /petsc/include/petscoptions.h /petsc/include/petscts.h /petsc/include/petscviewer.h /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/impls/da/dacreate.c /petsc/src/dm/impls/network/networkcreate.c /petsc/src/dm/impls/patch/patchcreate.c /petsc/src/dm/impls/plex/plexcreate.c /petsc/src/ksp/ksp/examples/tests/makefile /petsc/src/ksp/ksp/examples/tutorials/ex61f.F90 /petsc/src/ksp/ksp/examples/tutorials/makefile /petsc/src/ksp/ksp/impls/bcgs/bcgs.c /petsc/src/ksp/ksp/impls/bcgs/bcgsimpl.h /petsc/src/ksp/ksp/impls/bcgsl/bcgsl.c /petsc/src/ksp/ksp/impls/cg/cg.c /petsc/src/ksp/ksp/impls/cg/cgne/cgne.c /petsc/src/ksp/ksp/impls/cg/gltr/gltr.c /petsc/src/ksp/ksp/impls/cg/nash/nash.c /petsc/src/ksp/ksp/impls/cg/stcg/stcg.c /petsc/src/ksp/ksp/impls/cheby/cheby.c /petsc/src/ksp/ksp/impls/fcg/fcg.c /petsc/src/ksp/ksp/impls/gcr/gcr.c /petsc/src/ksp/ksp/impls/gmres/agmres/agmres.c /petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c /petsc/src/ksp/ksp/impls/gmres/fgmres/fgmres.c /petsc/src/ksp/ksp/impls/gmres/gmres.c /petsc/src/ksp/ksp/impls/gmres/gmresimpl.h /petsc/src/ksp/ksp/impls/gmres/lgmres/lgmres.c /petsc/src/ksp/ksp/impls/gmres/pgmres/pgmres.c /petsc/src/ksp/ksp/impls/lcd/lcd.c /petsc/src/ksp/ksp/impls/lsqr/lsqr.c /petsc/src/ksp/ksp/impls/qcg/qcg.c /petsc/src/ksp/ksp/impls/rich/rich.c /petsc/src/ksp/ksp/impls/specest/specest.c /petsc/src/ksp/ksp/utils/schurm.c /petsc/src/ksp/pc/impls/ainvcusp/ainvcusp.cu /petsc/src/ksp/pc/impls/asm/asm.c /petsc/src/ksp/pc/impls/bddc/bddc.c /petsc/src/ksp/pc/impls/bicgstabcusp/bicgstabcusp.cu /petsc/src/ksp/pc/impls/bjacobi/bjacobi.c /petsc/src/ksp/pc/impls/composite/composite.c /petsc/src/ksp/pc/impls/cp/cp.c /petsc/src/ksp/pc/impls/eisens/eisen.c /petsc/src/ksp/pc/impls/factor/cholesky/cholesky.c /petsc/src/ksp/pc/impls/factor/factimpl.c /petsc/src/ksp/pc/impls/factor/factor.h /petsc/src/ksp/pc/impls/factor/icc/icc.c /petsc/src/ksp/pc/impls/factor/ilu/ilu.c /petsc/src/ksp/pc/impls/factor/lu/lu.c /petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c /petsc/src/ksp/pc/impls/gamg/agg.c /petsc/src/ksp/pc/impls/gamg/classical.c /petsc/src/ksp/pc/impls/gamg/gamg.c /petsc/src/ksp/pc/impls/gamg/gamg.h /petsc/src/ksp/pc/impls/gamg/geo.c /petsc/src/ksp/pc/impls/gasm/gasm.c /petsc/src/ksp/pc/impls/hypre/hypre.c /petsc/src/ksp/pc/impls/jacobi/jacobi.c /petsc/src/ksp/pc/impls/kaczmarz/kaczmarz.c /petsc/src/ksp/pc/impls/lsc/lsc.c /petsc/src/ksp/pc/impls/mg/mg.c /petsc/src/ksp/pc/impls/mg/mgimpl.h /petsc/src/ksp/pc/impls/ml/ml.c /petsc/src/ksp/pc/impls/parms/parms.c /petsc/src/ksp/pc/impls/redistribute/redistribute.c /petsc/src/ksp/pc/impls/redundant/redundant.c /petsc/src/ksp/pc/impls/sacusp/sacusp.cu /petsc/src/ksp/pc/impls/sacusp/sacusppoly.cu /petsc/src/ksp/pc/impls/sor/sor.c /petsc/src/ksp/pc/impls/spai/ispai.c /petsc/src/ksp/pc/impls/svd/svd.c /petsc/src/ksp/pc/impls/tfs/tfs.c /petsc/src/ksp/pc/impls/wb/wb.c /petsc/src/mat/color/impls/jp/jp.c /petsc/src/mat/impls/aij/mpi/mpicusp/mpiaijcusp.cu /petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu /petsc/src/mat/impls/aij/seq/seqcusp/aijcusp.cu /petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu /petsc/src/mat/impls/aij/seq/seqviennacl/aijviennacl.cxx /petsc/src/mat/impls/mffd/mffd.c /petsc/src/mat/impls/mffd/mffddef.c /petsc/src/mat/impls/mffd/mffdimpl.h /petsc/src/mat/impls/mffd/wp.c /petsc/src/mat/partition/impls/chaco/chaco.c /petsc/src/mat/partition/impls/party/party.c /petsc/src/mat/partition/impls/pmetis/pmetis.c /petsc/src/mat/partition/impls/scotch/scotch.c /petsc/src/snes/impls/composite/snescomposite.c /petsc/src/snes/impls/fas/fas.c /petsc/src/snes/impls/gs/snesgs.c /petsc/src/snes/impls/ls/ls.c /petsc/src/snes/impls/ms/ms.c /petsc/src/snes/impls/multiblock/multiblock.c /petsc/src/snes/impls/nasm/nasm.c /petsc/src/snes/impls/ncg/snesncg.c /petsc/src/snes/impls/ngmres/anderson.c /petsc/src/snes/impls/ngmres/snesngmres.c /petsc/src/snes/impls/qn/qn.c /petsc/src/snes/impls/richardson/snesrichardson.c /petsc/src/snes/impls/shell/snesshell.c /petsc/src/snes/impls/test/snestest.c /petsc/src/snes/impls/tr/tr.c /petsc/src/snes/impls/vi/ss/viss.c /petsc/src/snes/impls/vi/vi.c /petsc/src/snes/linesearch/impls/bt/linesearchbt.c /petsc/src/sys/classes/random/interface/randomc.c /petsc/src/sys/classes/random/randomimpl.h /petsc/src/sys/classes/viewer/impls/draw/drawv.c /petsc/src/sys/classes/viewer/impls/socket/send.c /petsc/src/sys/objects/aoptions.c /petsc/src/sys/threadcomm/interface/threadcommregi.c /petsc/src/tao/bound/impls/blmvm/blmvm.c /petsc/src/tao/bound/impls/bqpip/bqpip.c /petsc/src/tao/bound/impls/gpcg/gpcg.c /petsc/src/tao/bound/impls/tron/tron.c /petsc/src/tao/complementarity/impls/ssls/ssls.c /petsc/src/tao/complementarity/impls/ssls/ssls.h /petsc/src/tao/constrained/impls/ipm/ipm.c /petsc/src/tao/interface/fdtest.c /petsc/src/tao/leastsquares/impls/pounders/pounders.c /petsc/src/tao/linesearch/impls/armijo/armijo.c /petsc/src/tao/linesearch/impls/morethuente/morethuente.c /petsc/src/tao/linesearch/impls/owarmijo/owarmijo.c /petsc/src/tao/linesearch/impls/unit/unit.c /petsc/src/tao/pde_constrained/impls/lcl/lcl.c /petsc/src/tao/unconstrained/impls/bmrm/bmrm.c /petsc/src/tao/unconstrained/impls/cg/taocg.c /petsc/src/tao/unconstrained/impls/lmvm/lmvm.c /petsc/src/tao/unconstrained/impls/neldermead/neldermead.c /petsc/src/tao/unconstrained/impls/nls/nls.c /petsc/src/tao/unconstrained/impls/ntl/ntl.c /petsc/src/tao/unconstrained/impls/ntr/ntr.c /petsc/src/tao/unconstrained/impls/owlqn/owlqn.c /petsc/src/ts/adapt/impls/basic/adaptbasic.c /petsc/src/ts/adapt/impls/cfl/adaptcfl.c /petsc/src/ts/adapt/interface/tsadapt.c /petsc/src/ts/examples/tests/ex10.c /petsc/src/ts/impls/arkimex/arkimex.c /petsc/src/ts/impls/eimex/eimex.c /petsc/src/ts/impls/explicit/euler/euler.c /petsc/src/ts/impls/explicit/rk/rk.c /petsc/src/ts/impls/explicit/ssp/ssp.c /petsc/src/ts/impls/implicit/alpha/alpha.c /petsc/src/ts/impls/implicit/gl/gl.c /petsc/src/ts/impls/implicit/gl/gladapt.c /petsc/src/ts/impls/implicit/sundials/sundials.c /petsc/src/ts/impls/implicit/theta/theta.c /petsc/src/ts/impls/pseudo/posindep.c /petsc/src/ts/impls/rosw/rosw.c /petsc/src/ts/interface/ts.c is/sf/impls/basic/sfbasic.c is/sf/impls/window/sfwindow.c pf/impls/constant/const.c pf/impls/matlab/cmatlab.c pf/impls/string/cstring.c pf/pfimpl.h vec/impls/seq/seqviennacl/vecviennacl.cxx vec/impls/seq/seqviennacl/viennaclvecimpl.h vec/interface/vector.c
c659dc0d	19-Jan-2015	Dominic Meiser <dmeiser@txcorp.com>	Enhance documentation for VecGetLocalVector() and related functions. vec/interface/rvector.c
046dc149	19-Jan-2015	Dominic Meiser <dmeiser@txcorp.com>	Fix signature of VecGetLocalVector and related functions. The second argument should be 'Vec w' rather than 'Vec *w' because these functions expect a fully constructed vector. /petsc/config/BuildSystem/config/packages/sowing.py /petsc/include/petscvec.h /petsc/src/dm/impls/composite/pack.c /petsc/src/dm/impls/redundant/dmredundant.c /petsc/src/dm/makefile /petsc/src/ksp/pc/impls/bjacobi/bjacobi.c /petsc/src/ts/characteristic/interface/slregis.c vec/impls/seq/seqcusp/cuspvecimpl.h vec/impls/seq/seqcusp/veccusp.cu vec/interface/rvector.c /petsc/tutorials/HandsOnExercise.html
2b26979f	17-Jan-2015	Barry Smith <bsmith@mcs.anl.gov>	update to use Sowing 1.17 fixed many documentation errors as well /petsc/bin/maint/generatefortranstubs.py /petsc/config/BuildSystem/config/packages/sowing.py /petsc/include/petscksp.h /petsc/include/petscsys.h /petsc/include/petscvec.h /petsc/lib/petsc-conf/bfort-base.txt /petsc/lib/petsc-conf/bfort-mpi.txt /petsc/lib/petsc-conf/bfort-petsc.txt /petsc/src/dm/impls/plex/plexsubmesh.c /petsc/src/ksp/ksp/impls/fcg/fcg.c /petsc/src/ksp/pc/interface/precon.c /petsc/src/mat/impls/aij/mpi/mkl_cpardiso/mkl_cpardiso.c /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c /petsc/src/mat/interface/matrix.c /petsc/src/snes/interface/snesob.c /petsc/src/sys/webclient/box.c /petsc/src/sys/webclient/globus.c /petsc/src/sys/webclient/google.c /petsc/src/sys/webclient/textbelt.c vec/interface/rvector.c /petsc/tutorials/HandsOnExercise.html
22b6d1ca	16-Jan-2015	Barry Smith <bsmith@mcs.anl.gov>	added --with-threadsafety flag other cleanup for threadsafety removed Euclid due to bit rot /petsc/config/PETSc/options/libraryOptions.py /petsc/include/petsc-private/matimpl.h /petsc/include/petsc-private/taoimpl.h /petsc/include/petsc-private/taolinesearchimpl.h /petsc/include/petscoptions.h /petsc/include/petscvec.h /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/examples/tests/makefile /petsc/src/dm/impls/network/networkcreate.c /petsc/src/dm/impls/plex/plexcreate.c /petsc/src/docs/tex/manual/acknowl.tex /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/docs/website/documentation/linearsolvertable.html /petsc/src/docs/website/miscellaneous/external.html /petsc/src/ksp/ksp/examples/tutorials/makefile /petsc/src/ksp/ksp/impls/fcg/fcg.c /petsc/src/ksp/ksp/impls/lsqr/lsqr.h /petsc/src/ksp/ksp/utils/schurm.c /petsc/src/ksp/pc/impls/gamg/classical.c /petsc/src/ksp/pc/impls/hypre/hypre.c /petsc/src/ksp/pc/impls/kaczmarz/kaczmarz.c /petsc/src/ksp/pc/impls/lsc/lsc.c /petsc/src/ksp/pc/impls/ml/ml.c /petsc/src/mat/color/impls/jp/jp.c /petsc/src/mat/color/interface/matcoloring.c /petsc/src/sys/dll/reg.c /petsc/src/sys/objects/aoptions.c /petsc/src/sys/objects/pinit.c /petsc/src/sys/threadcomm/interface/threadcomm.c /petsc/src/tao/bound/impls/blmvm/blmvm.c /petsc/src/tao/bound/impls/bqpip/bqpip.c /petsc/src/tao/bound/impls/gpcg/gpcg.c /petsc/src/tao/bound/impls/tron/tron.c /petsc/src/tao/bound/utils/isutil.c /petsc/src/tao/complementarity/impls/ssls/ssfls.c /petsc/src/tao/complementarity/impls/ssls/ssls.c /petsc/src/tao/complementarity/impls/ssls/ssls.h /petsc/src/tao/constrained/impls/ipm/ipm.c /petsc/src/tao/interface/fdtest.c /petsc/src/tao/interface/taosolver.c /petsc/src/tao/leastsquares/impls/pounders/pounders.c /petsc/src/tao/linesearch/impls/armijo/armijo.c /petsc/src/tao/linesearch/impls/morethuente/morethuente.c /petsc/src/tao/linesearch/impls/owarmijo/owarmijo.c /petsc/src/tao/linesearch/impls/unit/unit.c /petsc/src/tao/linesearch/interface/taolinesearch.c /petsc/src/tao/matrix/lmvmmat.c /petsc/src/tao/pde_constrained/examples/tutorials/elliptic.c /petsc/src/tao/pde_constrained/examples/tutorials/hyperbolic.c /petsc/src/tao/pde_constrained/examples/tutorials/parabolic.c /petsc/src/tao/pde_constrained/impls/lcl/lcl.c /petsc/src/tao/unconstrained/impls/bmrm/bmrm.c /petsc/src/tao/unconstrained/impls/cg/taocg.c /petsc/src/tao/unconstrained/impls/lmvm/lmvm.c /petsc/src/tao/unconstrained/impls/neldermead/neldermead.c /petsc/src/tao/unconstrained/impls/nls/nls.c /petsc/src/tao/unconstrained/impls/ntl/ntl.c /petsc/src/tao/unconstrained/impls/ntr/ntr.c /petsc/src/tao/unconstrained/impls/owlqn/owlqn.c /petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex1.c /petsc/src/ts/examples/tutorials/ex31.c /petsc/src/ts/examples/tutorials/phasefield/biharmonic.c /petsc/src/ts/examples/tutorials/phasefield/biharmonic2.c /petsc/src/ts/examples/tutorials/phasefield/biharmonic3.c vec/interface/vector.c
ff86c2c9	15-Jan-2015	Matthew G. Knepley <knepley@gmail.com>	Merge branch 'mlange/feature-plex-gmsh-fortran' * mlange/feature-plex-gmsh-fortran: SF: Activate Fortran wrapper for PetscSFDestroy() Plex-Gmsh: Loosen the version requirement for .msh files P Merge branch 'mlange/feature-plex-gmsh-fortran' * mlange/feature-plex-gmsh-fortran: SF: Activate Fortran wrapper for PetscSFDestroy() Plex-Gmsh: Loosen the version requirement for .msh files Plex-Gmsh: Add custom Fortran wrapper for DMPlexCreateGmshFromFile show more ... /petsc/bin/maint/generatefortranstubs.py /petsc/config/BuildSystem/config/packages/SuiteSparse.py /petsc/config/BuildSystem/config/packages/ctetgen.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/configure.py /petsc/config/examples/arch-linux-gcc-real-env.py /petsc/config/examples/arch-osx-10.6-cxx-env.py /petsc/lib/petsc-conf/install.py /petsc/setup.py /petsc/src/dm/impls/plex/ftn-custom/makefile /petsc/src/dm/impls/plex/ftn-custom/zplexgmsh.c /petsc/src/dm/impls/plex/plexgmsh.c /petsc/src/dm/impls/plex/plexlabel.c /petsc/src/docs/tex/manual/acknowl.tex /petsc/src/docs/tex/petsc.bib /petsc/src/docs/tex/petscapp.bib /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/docs/website/documentation/linearsolvertable.html /petsc/src/docs/website/index.html /petsc/src/docs/website/miscellaneous/external.html /petsc/src/ksp/ksp/examples/tests/ex32.c /petsc/src/ksp/ksp/examples/tests/makefile /petsc/src/ksp/ksp/examples/tests/output/ex32_cholmod.out /petsc/src/ksp/ksp/examples/tests/output/ex32_cholmod_sbaij.out /petsc/src/ksp/ksp/impls/lsqr/lsqr.c /petsc/src/mat/impls/aij/seq/klu/klu.c /petsc/src/mat/impls/aij/seq/umfpack/umfpack.c /petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c /petsc/src/snes/examples/tutorials/makefile /petsc/src/snes/examples/tutorials/output/ex19_umfpack.out is/sf/interface/sf.c
e55864a3	08-Nov-2013	Barry Smith <bsmith@mcs.anl.gov>	moved PetscOptionsObject from global variable to local variable in functions /petsc/config/BuildSystem/config/packages/SuiteSparse.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/configure.py /petsc/config/examples/arch-linux-gcc-real-env.py /petsc/config/examples/arch-osx-10.6-cxx-env.py /petsc/include/petsc-private/dmimpl.h /petsc/include/petsc-private/kspimpl.h /petsc/include/petsc-private/linesearchimpl.h /petsc/include/petsc-private/matimpl.h /petsc/include/petsc-private/pcimpl.h /petsc/include/petsc-private/petscfeimpl.h /petsc/include/petsc-private/sfimpl.h /petsc/include/petsc-private/snesimpl.h /petsc/include/petsc-private/tsimpl.h /petsc/include/petsc-private/vecimpl.h /petsc/include/petsc-private/viewerimpl.h /petsc/include/petscoptions.h /petsc/include/petscts.h /petsc/include/petscvec.h /petsc/include/petscviewer.h /petsc/lib/petsc-conf/install.py /petsc/setup.py /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/impls/da/dacreate.c /petsc/src/dm/impls/patch/patchcreate.c /petsc/src/dm/interface/dm.c /petsc/src/docs/tex/manual/acknowl.tex /petsc/src/docs/tex/petsc.bib /petsc/src/docs/tex/petscapp.bib /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/docs/website/documentation/linearsolvertable.html /petsc/src/docs/website/index.html /petsc/src/docs/website/miscellaneous/external.html /petsc/src/ksp/ksp/examples/tests/ex32.c /petsc/src/ksp/ksp/examples/tests/makefile /petsc/src/ksp/ksp/examples/tests/output/ex32_cholmod.out /petsc/src/ksp/ksp/examples/tests/output/ex32_cholmod_sbaij.out /petsc/src/ksp/ksp/impls/bcgs/bcgs.c /petsc/src/ksp/ksp/impls/bcgs/bcgsimpl.h /petsc/src/ksp/ksp/impls/bcgsl/bcgsl.c /petsc/src/ksp/ksp/impls/cg/cg.c /petsc/src/ksp/ksp/impls/cg/cgne/cgne.c /petsc/src/ksp/ksp/impls/cg/gltr/gltr.c /petsc/src/ksp/ksp/impls/cg/nash/nash.c /petsc/src/ksp/ksp/impls/cg/stcg/stcg.c /petsc/src/ksp/ksp/impls/cheby/cheby.c /petsc/src/ksp/ksp/impls/gcr/gcr.c /petsc/src/ksp/ksp/impls/gmres/agmres/agmres.c /petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c /petsc/src/ksp/ksp/impls/gmres/fgmres/fgmres.c /petsc/src/ksp/ksp/impls/gmres/gmres.c /petsc/src/ksp/ksp/impls/gmres/gmresimpl.h /petsc/src/ksp/ksp/impls/gmres/lgmres/lgmres.c /petsc/src/ksp/ksp/impls/gmres/pgmres/pgmres.c /petsc/src/ksp/ksp/impls/lcd/lcd.c /petsc/src/ksp/ksp/impls/lsqr/lsqr.c /petsc/src/ksp/ksp/impls/qcg/qcg.c /petsc/src/ksp/ksp/impls/rich/rich.c /petsc/src/ksp/ksp/impls/specest/specest.c /petsc/src/ksp/ksp/interface/itcl.c /petsc/src/ksp/ksp/utils/schurm.c /petsc/src/ksp/pc/impls/ainvcusp/ainvcusp.cu /petsc/src/ksp/pc/impls/asm/asm.c /petsc/src/ksp/pc/impls/bddc/bddc.c /petsc/src/ksp/pc/impls/bicgstabcusp/bicgstabcusp.cu /petsc/src/ksp/pc/impls/bjacobi/bjacobi.c /petsc/src/ksp/pc/impls/composite/composite.c /petsc/src/ksp/pc/impls/cp/cp.c /petsc/src/ksp/pc/impls/eisens/eisen.c /petsc/src/ksp/pc/impls/factor/cholesky/cholesky.c /petsc/src/ksp/pc/impls/factor/factimpl.c /petsc/src/ksp/pc/impls/factor/factor.h /petsc/src/ksp/pc/impls/factor/icc/icc.c /petsc/src/ksp/pc/impls/factor/ilu/ilu.c /petsc/src/ksp/pc/impls/factor/lu/lu.c /petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c /petsc/src/ksp/pc/impls/gamg/agg.c /petsc/src/ksp/pc/impls/gamg/classical.c /petsc/src/ksp/pc/impls/gamg/gamg.c /petsc/src/ksp/pc/impls/gamg/gamg.h /petsc/src/ksp/pc/impls/gamg/geo.c /petsc/src/ksp/pc/impls/gasm/gasm.c /petsc/src/ksp/pc/impls/hypre/hypre.c /petsc/src/ksp/pc/impls/jacobi/jacobi.c /petsc/src/ksp/pc/impls/lsc/lsc.c /petsc/src/ksp/pc/impls/mg/mg.c /petsc/src/ksp/pc/impls/mg/mgimpl.h /petsc/src/ksp/pc/impls/ml/ml.c /petsc/src/ksp/pc/impls/parms/parms.c /petsc/src/ksp/pc/impls/redistribute/redistribute.c /petsc/src/ksp/pc/impls/redundant/redundant.c /petsc/src/ksp/pc/impls/sacusp/sacusp.cu /petsc/src/ksp/pc/impls/sacusp/sacusppoly.cu /petsc/src/ksp/pc/impls/sor/sor.c /petsc/src/ksp/pc/impls/spai/ispai.c /petsc/src/ksp/pc/impls/svd/svd.c /petsc/src/ksp/pc/impls/tfs/tfs.c /petsc/src/ksp/pc/impls/wb/wb.c /petsc/src/ksp/pc/interface/pcset.c /petsc/src/mat/coarsen/coarsen.c /petsc/src/mat/impls/aij/mpi/mpicusp/mpiaijcusp.cu /petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu /petsc/src/mat/impls/aij/seq/klu/klu.c /petsc/src/mat/impls/aij/seq/seqcusp/aijcusp.cu /petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu /petsc/src/mat/impls/aij/seq/seqviennacl/aijviennacl.cxx /petsc/src/mat/impls/aij/seq/umfpack/umfpack.c /petsc/src/mat/impls/mffd/mffd.c /petsc/src/mat/impls/mffd/mffddef.c /petsc/src/mat/impls/mffd/mffdimpl.h /petsc/src/mat/impls/mffd/wp.c /petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c /petsc/src/mat/partition/impls/chaco/chaco.c /petsc/src/mat/partition/impls/party/party.c /petsc/src/mat/partition/impls/pmetis/pmetis.c /petsc/src/mat/partition/impls/scotch/scotch.c /petsc/src/mat/partition/partition.c /petsc/src/mat/utils/gcreate.c /petsc/src/snes/examples/tutorials/makefile /petsc/src/snes/examples/tutorials/output/ex19_umfpack.out /petsc/src/snes/impls/composite/snescomposite.c /petsc/src/snes/impls/fas/fas.c /petsc/src/snes/impls/gs/snesgs.c /petsc/src/snes/impls/ls/ls.c /petsc/src/snes/impls/ms/ms.c /petsc/src/snes/impls/multiblock/multiblock.c /petsc/src/snes/impls/nasm/nasm.c /petsc/src/snes/impls/ncg/snesncg.c /petsc/src/snes/impls/ngmres/anderson.c /petsc/src/snes/impls/ngmres/snesngmres.c /petsc/src/snes/impls/qn/qn.c /petsc/src/snes/impls/richardson/snesrichardson.c /petsc/src/snes/impls/shell/snesshell.c /petsc/src/snes/impls/test/snestest.c /petsc/src/snes/impls/tr/tr.c /petsc/src/snes/impls/vi/ss/viss.c /petsc/src/snes/impls/vi/vi.c /petsc/src/snes/interface/snes.c /petsc/src/snes/interface/snesj.c /petsc/src/snes/interface/snesob.c /petsc/src/snes/linesearch/impls/bt/linesearchbt.c /petsc/src/snes/linesearch/interface/linesearch.c /petsc/src/sys/classes/random/interface/randomc.c /petsc/src/sys/classes/random/randomimpl.h /petsc/src/sys/classes/viewer/impls/draw/drawv.c /petsc/src/sys/classes/viewer/impls/socket/send.c /petsc/src/sys/classes/viewer/interface/viewreg.c /petsc/src/sys/objects/aoptions.c /petsc/src/sys/objects/options.c /petsc/src/sys/objects/subcomm.c /petsc/src/sys/utils/sseenabled.c /petsc/src/ts/adapt/impls/basic/adaptbasic.c /petsc/src/ts/adapt/impls/cfl/adaptcfl.c /petsc/src/ts/adapt/interface/tsadapt.c /petsc/src/ts/examples/tests/ex10.c /petsc/src/ts/examples/tutorials/ex11.c /petsc/src/ts/examples/tutorials/ex20.c /petsc/src/ts/impls/arkimex/arkimex.c /petsc/src/ts/impls/eimex/eimex.c /petsc/src/ts/impls/explicit/euler/euler.c /petsc/src/ts/impls/explicit/rk/rk.c /petsc/src/ts/impls/explicit/ssp/ssp.c /petsc/src/ts/impls/implicit/alpha/alpha.c /petsc/src/ts/impls/implicit/gl/gl.c /petsc/src/ts/impls/implicit/gl/gladapt.c /petsc/src/ts/impls/implicit/sundials/sundials.c /petsc/src/ts/impls/implicit/theta/theta.c /petsc/src/ts/impls/pseudo/posindep.c /petsc/src/ts/impls/rosw/rosw.c 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d36d33e4	13-Jan-2015	Matthew G. Knepley <knepley@gmail.com>	SF: Activate Fortran wrapper for PetscSFDestroy() /petsc/bin/maint/PetscStaticFunctionCandidates.py /petsc/bin/maint/generatefortranstubs.py /petsc/bin/petscpythonscripts/PetscBinaryIO.py /petsc/bin/petscpythonscripts/PetscBinaryIO_tests.py /petsc/bin/petscpythonscripts/petsc_conf.py /petsc/bin/petscpythonscripts/petsc_gen_xdmf.py /petsc/bin/petscpythonscripts/petsclogformat.py /petsc/bin/petscpythonscripts/petscnagupgrade.py /petsc/conf/install.py /petsc/conf/rules /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/BuildSystem/config/packages/hwloc.py /petsc/config/BuildSystem/config/packages/mkl_cpardiso.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/PETSc/Configure.py /petsc/config/builder.py /petsc/config/configure.py /petsc/config/examples/arch-ms-msvc2012-intelmpi-cudano-nomumps-cpardiso-indexes64-mklilp64-debug.py /petsc/include/finclude/ftn-custom/petscmat.h90 /petsc/include/mpiuni/mpi.h /petsc/include/petsc-private/dmdaimpl.h /petsc/include/petsc-private/kspimpl.h /petsc/include/petsc-private/snesimpl.h /petsc/include/petscdmda.h /petsc/include/petscdmmoab.h /petsc/include/petscksp.h /petsc/include/petscmat.h /petsc/include/petscsnes.h /petsc/share/petsc/matlab/PetscBinaryWrite.m /petsc/src/benchmarks/streams/MPIVersion.c /petsc/src/contrib/fun3d/comp/flow.c /petsc/src/contrib/fun3d/comp/ginput.faces /petsc/src/dm/impls/da/dacreate.c /petsc/src/dm/impls/da/dadestroy.c /petsc/src/dm/impls/da/daindex.c /petsc/src/dm/impls/moab/dmmbfield.cxx /petsc/src/dm/impls/moab/dmmbmat.cxx /petsc/src/dm/impls/moab/dmmbvec.cxx /petsc/src/dm/impls/moab/dmmoab.cxx /petsc/src/dm/impls/plex/ftn-custom/makefile /petsc/src/dm/impls/plex/ftn-custom/zplexgmsh.c /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/plex/plexgenerate.c /petsc/src/dm/impls/plex/plexgmsh.c /petsc/src/docs/tex/manual/part2.tex /petsc/src/docs/tex/petsc.bib /petsc/src/docs/tex/petscapp.bib /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/ksp/examples/tests/output/ex11_1.out /petsc/src/ksp/ksp/examples/tests/output/ex11_2.out /petsc/src/ksp/ksp/examples/tutorials/ex35.cxx /petsc/src/ksp/ksp/examples/tutorials/ex49.c /petsc/src/ksp/ksp/examples/tutorials/ex59.c /petsc/src/ksp/ksp/examples/tutorials/output/ex49_4.out /petsc/src/ksp/ksp/examples/tutorials/output/ex49_5.out /petsc/src/ksp/ksp/interface/itcl.c /petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/mat/impls/aij/mpi/makefile /petsc/src/mat/impls/aij/mpi/mkl_cpardiso/makefile /petsc/src/mat/impls/aij/mpi/mkl_cpardiso/mkl_cpardiso.c /petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c /petsc/src/mat/interface/dlregismat.c /petsc/src/snes/examples/tutorials/ex12.c /petsc/src/snes/examples/tutorials/ex62.c /petsc/src/snes/impls/vi/vi.c /petsc/src/snes/interface/snes.c /petsc/src/sys/classes/viewer/impls/vtk/vtkv.c /petsc/src/sys/classes/viewer/interface/viewreg.c /petsc/src/sys/objects/options.c /petsc/src/tao/examples/tutorials/ex1.c /petsc/src/ts/adapt/interface/tsadapt.c /petsc/src/ts/examples/tutorials/ex35.cxx /petsc/src/ts/impls/implicit/theta/theta.c /petsc/src/ts/impls/rosw/rosw.c /petsc/src/ts/interface/ts.c is/sf/interface/sf.c
fe998a80	13-Jan-2015	Barry Smith <bsmith@mcs.anl.gov>	manual merge of conflict /petsc/bin/configVars.py /petsc/bin/maint/builddist /petsc/bin/maint/buildtest /petsc/bin/maint/generateetags.py /petsc/bin/maint/generatefortranstubs.py /petsc/bin/maint/generators/matlab.py /petsc/bin/maint/toclapack.sh /petsc/bin/maint/xclude /petsc/bin/mpiexec.sshsync /petsc/bin/petsc-mpiexec.uni /petsc/bin/petsc-pythonscripts/PetscBinaryIO.py /petsc/bin/petsc-pythonscripts/PetscBinaryIO_tests.py /petsc/bin/petsc-pythonscripts/petsc_conf.py /petsc/bin/petsc-pythonscripts/petsc_gen_xdmf.py /petsc/bin/petsc-pythonscripts/petsclogformat.py /petsc/bin/petsc-pythonscripts/petscnagupgrade.py /petsc/bin/petscmpiexec /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/Triangle.py /petsc/config/BuildSystem/config/packages/fblaslapack.py /petsc/config/BuildSystem/config/packages/mpi4py.py 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8fb42493	31-Dec-2014	Barry Smith <bsmith@mcs.anl.gov>	mv include/finclude to include/petsc-finclude for namespacing in installs /petsc/bin/maint/generatefortranstubs.py /petsc/bin/portabilitycheck.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/builder.py /petsc/include/makefile /petsc/include/petsc-finclude/ftn-custom/makefile /petsc/include/petsc-finclude/ftn-custom/petscdm.h90 /petsc/include/petsc-finclude/ftn-custom/petscdmcomposite.h90 /petsc/include/petsc-finclude/ftn-custom/petscdmda.h90 /petsc/include/petsc-finclude/ftn-custom/petscdmdef.h90 /petsc/include/petsc-finclude/ftn-custom/petscdmhide.h90 /petsc/include/petsc-finclude/ftn-custom/petscdmplex.h90 /petsc/include/petsc-finclude/ftn-custom/petscdmplexdef.h90 /petsc/include/petsc-finclude/ftn-custom/petscdmredundant.h90 /petsc/include/petsc-finclude/ftn-custom/petscdmshell.h90 /petsc/include/petsc-finclude/ftn-custom/petscdt.h90 /petsc/include/petsc-finclude/ftn-custom/petscdtdef.h90 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927ffcc3	08-Jan-2015	Jed Brown <jed@jedbrown.org>	Merge branch 'jed/doc-fixes' * jed/doc-fixes: Vec: fix documentation link in example KSP: update documentation for supported norm types and PC sides Conflicts: src/ksp/ksp/interface/itcreate.c Merge branch 'jed/doc-fixes' * jed/doc-fixes: Vec: fix documentation link in example KSP: update documentation for supported norm types and PC sides Conflicts: src/ksp/ksp/interface/itcreate.c src/ksp/ksp/interface/itfunc.c show more ... /petsc/bin/maint/PetscStaticFunctionCandidates.py /petsc/bin/maint/generatefortranstubs.py /petsc/bin/petscpythonscripts/PetscBinaryIO.py /petsc/bin/petscpythonscripts/PetscBinaryIO_tests.py /petsc/bin/petscpythonscripts/petsc_conf.py /petsc/bin/petscpythonscripts/petsc_gen_xdmf.py /petsc/bin/petscpythonscripts/petsclogformat.py /petsc/bin/petscpythonscripts/petscnagupgrade.py /petsc/conf/install.py /petsc/conf/rules /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/BuildSystem/config/packages/hwloc.py /petsc/config/BuildSystem/config/packages/mkl_cpardiso.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/PETSc/Configure.py /petsc/config/builder.py /petsc/config/configure.py /petsc/config/examples/arch-ms-msvc2012-intelmpi-cudano-nomumps-cpardiso-indexes64-mklilp64-debug.py /petsc/include/finclude/ftn-custom/petscmat.h90 /petsc/include/mpiuni/mpi.h /petsc/include/petsc-private/dmdaimpl.h /petsc/include/petsc-private/kspimpl.h /petsc/include/petsc-private/snesimpl.h /petsc/include/petscdmda.h /petsc/include/petscdmmoab.h /petsc/include/petscksp.h /petsc/include/petscmat.h /petsc/include/petscsnes.h /petsc/share/petsc/matlab/PetscBinaryWrite.m /petsc/src/benchmarks/streams/MPIVersion.c /petsc/src/contrib/fun3d/comp/flow.c /petsc/src/contrib/fun3d/comp/ginput.faces /petsc/src/dm/impls/da/dacreate.c /petsc/src/dm/impls/da/dadestroy.c /petsc/src/dm/impls/da/daindex.c /petsc/src/dm/impls/moab/dmmbfield.cxx /petsc/src/dm/impls/moab/dmmbmat.cxx /petsc/src/dm/impls/moab/dmmbvec.cxx /petsc/src/dm/impls/moab/dmmoab.cxx /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/plex/plexgenerate.c /petsc/src/docs/tex/manual/part2.tex /petsc/src/docs/tex/petsc.bib /petsc/src/docs/tex/petscapp.bib /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/ksp/examples/tests/output/ex11_1.out /petsc/src/ksp/ksp/examples/tests/output/ex11_2.out /petsc/src/ksp/ksp/examples/tutorials/ex35.cxx /petsc/src/ksp/ksp/examples/tutorials/ex49.c /petsc/src/ksp/ksp/examples/tutorials/ex59.c /petsc/src/ksp/ksp/examples/tutorials/output/ex49_4.out /petsc/src/ksp/ksp/examples/tutorials/output/ex49_5.out /petsc/src/ksp/ksp/interface/itcl.c /petsc/src/ksp/ksp/interface/itcreate.c /petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/mat/impls/aij/mpi/makefile /petsc/src/mat/impls/aij/mpi/mkl_cpardiso/makefile /petsc/src/mat/impls/aij/mpi/mkl_cpardiso/mkl_cpardiso.c /petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c /petsc/src/mat/interface/dlregismat.c /petsc/src/snes/examples/tutorials/ex12.c /petsc/src/snes/examples/tutorials/ex62.c /petsc/src/snes/impls/vi/vi.c /petsc/src/snes/interface/snes.c /petsc/src/sys/classes/viewer/impls/vtk/vtkv.c /petsc/src/sys/classes/viewer/interface/viewreg.c /petsc/src/sys/objects/options.c /petsc/src/tao/examples/tutorials/ex1.c /petsc/src/ts/adapt/interface/tsadapt.c /petsc/src/ts/examples/tutorials/ex35.cxx /petsc/src/ts/impls/implicit/theta/theta.c /petsc/src/ts/impls/rosw/rosw.c /petsc/src/ts/interface/ts.c vec/examples/tutorials/ex6.c
3db060c5	08-Jan-2015	Jed Brown <jed@jedbrown.org>	Vec: fix documentation link in example Reported-by: David McWilliams <mcwild@rpi.edu> /petsc/config/PETSc/packages/SuiteSparse.py /petsc/include/finclude/ftn-custom/petscmat.h90 /petsc/src/ksp/ksp/impls/cg/cgeig.c /petsc/src/ksp/ksp/interface/itcreate.c /petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/mat/examples/tests/ex99.c /petsc/src/mat/examples/tests/makefile /petsc/src/ts/adapt/interface/tsadapt.c /petsc/src/ts/impls/implicit/theta/theta.c /petsc/src/ts/impls/rosw/rosw.c /petsc/src/ts/interface/ts.c vec/examples/tutorials/ex6.c
66c8c549	26-Dec-2014	Barry Smith <bsmith@mcs.anl.gov>	Merge branch 'barry/petscobjectviewfromoptions-resetincall' /petsc/include/petscksp.h /petsc/include/petscsnes.h /petsc/src/dm/impls/da/da1.c /petsc/src/dm/impls/da/da2.c /petsc/src/dm/impls/da/gr2.c /petsc/src/ksp/ksp/examples/tests/ex45.c /petsc/src/ksp/ksp/examples/tests/makefile /petsc/src/ksp/ksp/examples/tests/output/ex45_1.out /petsc/src/ksp/ksp/impls/fcg/fcg.c /petsc/src/ksp/ksp/interface/ftn-custom/zitfuncf.c /petsc/src/ksp/ksp/interface/ftn-custom/zxonf.c /petsc/src/ksp/ksp/interface/itcl.c /petsc/src/ksp/ksp/interface/iterativ.c /petsc/src/ksp/ksp/interface/xmon.c /petsc/src/snes/impls/vi/rs/virs.c /petsc/src/snes/interface/ftn-custom/zsnesf.c /petsc/src/snes/interface/snes.c /petsc/src/snes/interface/snesut.c /petsc/src/sys/objects/options.c is/is/utils/iscoloring.c vec/interface/vector.c
457e2cda	26-Dec-2014	Barry Smith <bsmith@mcs.anl.gov>	Merge branch 'barry/fix-hdf5' /petsc/include/petscviewerhdf5.h /petsc/src/dm/impls/da/gr2.c /petsc/src/dm/impls/plex/plexhdf5.c /petsc/src/sys/classes/viewer/impls/hdf5/hdf5v.c is/is/impls/general/general.c is/utils/isio.c vec/impls/mpi/pdvec.c vec/utils/vecio.c
9118fc56	26-Dec-2014	Barry Smith <bsmith@mcs.anl.gov>	Merge branch 'barry/fix-damp-not-one-pcapplyrichardson' /petsc/src/dm/impls/shell/dmshell.c /petsc/src/ksp/ksp/impls/gmres/gmres.c /petsc/src/ksp/ksp/impls/rich/rich.c /petsc/src/ksp/ksp/impls/specest/specest.c /petsc/src/ksp/ksp/interface/iguess.c /petsc/src/ksp/pc/impls/factor/ilu/ilu.c /petsc/src/ksp/pc/impls/ml/ml.c /petsc/src/ksp/pc/impls/tfs/gs.c /petsc/src/ksp/pc/interface/precon.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/aijfact.c /petsc/src/mat/impls/baij/seq/baij.c /petsc/src/mat/impls/baij/seq/baijfact2.c /petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c /petsc/src/mat/impls/sbaij/seq/sbaij.c /petsc/src/mat/interface/matrix.c /petsc/src/sys/classes/viewer/impls/socket/send.c /petsc/src/tao/bound/impls/tron/tron.c /petsc/src/tao/interface/taosolver.c /petsc/src/tao/interface/taosolver_fg.c /petsc/src/tao/leastsquares/impls/pounders/pounders.c /petsc/src/tao/pde_constrained/impls/lcl/lcl.c /petsc/src/ts/impls/eimex/eimex.c is/sf/impls/window/sfwindow.c
382d80ec	26-Dec-2014	Matthew G. Knepley <knepley@gmail.com>	Merge branch 'mlange/refactor-plex-distribute' * mlange/refactor-plex-distribute: (31 commits) Plex: MS compilers do not allow declarations in the middle of a block DMLabel: Add DMLabelMakeAllVa Merge branch 'mlange/refactor-plex-distribute' * mlange/refactor-plex-distribute: (31 commits) Plex: MS compilers do not allow declarations in the middle of a block DMLabel: Add DMLabelMakeAllValid_Private Plex ex12: Add fixed re-partitioning for load balance test DMLabel: Validate/build point arrays per stratum Plex: Remove obsolete partitioning routines Plex: Fix deadlock in DMPlexCreatePointNumbering Plex: Fix dynamic check for one-to-all pattern in DMPlexMigrate Plex: Add missing header entries Plex ex12: Enable L2-overlap test and switch to ascii_info_detail Plex ex1: Fix overlap tests and switch to ascii_info_detail Plex: Fix and clean up DMPlexCreatePointSF Plex: Correctly restore closure in DMPlexPartitionLabelClosure Plex: Let SegBuffer allocate partition graph to avoid memory corruption Plex ex12: Enabling parallel re-partitioning test via scii_latex output Plex: Enabling parallel re-partitioning via DMPlexDistribute Plex ex12: Add new test for parallel re-partitioning Plex: Add DMPlexCreatePointSF utility Plex: Fix overlap point SF generation Plex: Build complete overlap label and stratify resulting SF. Plex: Create parallel partitions that ParMetis accepts ... Conflicts: config/builder.py src/dm/impls/plex/examples/tests/output/ex1_13.out src/dm/impls/plex/examples/tests/output/ex1_14.out src/dm/impls/plex/plexlabel.c src/dm/impls/plex/plexpartition.c show more ... /petsc/config/builder.py /petsc/include/petsc-private/dmpleximpl.h /petsc/include/petsc-private/petscfeimpl.h /petsc/include/petscdmplex.h /petsc/include/petscfv.h /petsc/include/petscfvtypes.h /petsc/include/petscistypes.h /petsc/include/petscsnes.h /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/impls/plex/examples/tests/ex1.c /petsc/src/dm/impls/plex/examples/tests/ex12.c /petsc/src/dm/impls/plex/examples/tests/output/ex12_1.out /petsc/src/dm/impls/plex/examples/tests/output/ex12_2.out /petsc/src/dm/impls/plex/examples/tests/output/ex12_3.out /petsc/src/dm/impls/plex/examples/tests/output/ex12_4.out /petsc/src/dm/impls/plex/examples/tests/output/ex12_5.out /petsc/src/dm/impls/plex/examples/tests/output/ex12_6.out /petsc/src/dm/impls/plex/examples/tests/output/ex12_7.out /petsc/src/dm/impls/plex/examples/tests/output/ex1_13.out /petsc/src/dm/impls/plex/examples/tests/output/ex1_14.out /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/plex/plexdistribute.c /petsc/src/dm/impls/plex/plexlabel.c /petsc/src/dm/impls/plex/plexpartition.c /petsc/src/dm/impls/plex/plexrefine.c /petsc/src/docs/tex/manual/part2.tex /petsc/src/snes/utils/dmplexsnes.c /petsc/src/snes/utils/f90-custom/makefile /petsc/src/snes/utils/f90-custom/zdmplexsnesf90.c is/utils/vsectionis.c
aaf3ff59	23-Dec-2014	Matthew G. Knepley <knepley@gmail.com>	ISColoring: Added PetscCopyMode argument to create /petsc/bin/pythonscripts/petsc_conf.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/PTScotch.py /petsc/config/BuildSystem/config/packages/PaStiX.py /petsc/config/BuildSystem/config/packages/SuiteSparse.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/SuperLU_MT.py /petsc/config/BuildSystem/config/packages/Zoltan.py /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/BuildSystem/config/packages/metis.py /petsc/config/BuildSystem/config/packages/parmetis.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/Regression.py /petsc/config/PETSc/options/indexTypes.py /petsc/config/PETSc/options/libraryOptions.py /petsc/config/builder.py /petsc/config/cmakeboot.py /petsc/include/petsc-private/isimpl.h /petsc/include/petscerror.h /petsc/include/petscis.h /petsc/include/petscistypes.h /petsc/include/petscsys.h /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/impls/composite/pack.c /petsc/src/dm/impls/da/fdda.c /petsc/src/dm/impls/plex/examples/tests/output/ex1_13.out /petsc/src/dm/impls/plex/examples/tests/output/ex1_14.out /petsc/src/dm/impls/plex/examples/tests/output/ex1_17.out /petsc/src/dm/impls/plex/examples/tests/output/ex1_18.out /petsc/src/dm/impls/plex/examples/tests/output/ex1_2.out /petsc/src/dm/impls/plex/examples/tests/output/ex1_5.out /petsc/src/dm/impls/plex/examples/tests/output/ex1_9.out /petsc/src/dm/impls/plex/examples/tests/output/ex5_8.out /petsc/src/dm/impls/plex/examples/tests/output/ex5_9.out /petsc/src/dm/impls/plex/ftn-custom/makefile /petsc/src/dm/impls/plex/ftn-custom/zplexcreate.c /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/redundant/dmredundant.c /petsc/src/docs/tex/manual/part2.tex /petsc/src/docs/website/index.html /petsc/src/ksp/ksp/examples/tests/ex8.c /petsc/src/ksp/ksp/examples/tutorials/ex43.c /petsc/src/ksp/ksp/examples/tutorials/ex54.c /petsc/src/ksp/ksp/examples/tutorials/makefile /petsc/src/ksp/ksp/examples/tutorials/output/ex43_3.out /petsc/src/ksp/ksp/examples/tutorials/output/ex43_bjacobi.out /petsc/src/ksp/ksp/examples/tutorials/output/ex43_nested_gmg.out /petsc/src/ksp/pc/impls/gamg/gamg.c /petsc/src/ksp/pc/impls/gamg/tools.c /petsc/src/mat/color/impls/greedy/greedy.c /petsc/src/mat/color/impls/jp/jp.c /petsc/src/mat/color/impls/minpack/color.c /petsc/src/mat/color/impls/natural/natural.c /petsc/src/mat/examples/tests/ex172.c /petsc/src/mat/examples/tests/ex99.c /petsc/src/mat/examples/tests/makefile /petsc/src/mat/examples/tests/output/ex171_1.out /petsc/src/mat/examples/tests/output/ex180_1.out /petsc/src/mat/impls/aij/mpi/fdmpiaij.c /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/fdaij.c /petsc/src/mat/impls/aij/seq/inode.c /petsc/src/mat/impls/aij/seq/matmatmult.c /petsc/src/mat/impls/baij/mpi/mpibaij.c /petsc/src/mat/interface/matrix.c /petsc/src/mat/matfd/fdmatrix.c /petsc/src/snes/examples/tutorials/makefile /petsc/src/sys/error/err.c /petsc/src/sys/error/errtrace.c /petsc/src/sys/objects/options.c is/is/utils/ftn-custom/ziscoloringf.c is/is/utils/iscoloring.c
dbcf6e17	14-Dec-2014	Dave Nystrom <dave.nystrom@tachyonlogic.com>	Add fortran support for calling VecSetOptionsPrefix. /petsc/config/PETSc/packages/SuiteSparse.py /petsc/src/ksp/ksp/impls/cg/cgeig.c /petsc/src/ksp/ksp/interface/itfunc.c /petsc/src/mat/examples/tests/ex99.c /petsc/src/mat/examples/tests/makefile /petsc/src/ts/impls/rosw/rosw.c vec/interface/ftn-custom/zvectorf.c
955c1f14	22-Dec-2014	Barry Smith <bsmith@mcs.anl.gov>	-ksp_richardson_scale was ignored when PCApplyRichardson() was used Fix: turn off PCApplyRichardson() when scale is not 1 and print PetscInfo warning Reported-by: Mark Adams <mfadams@lbl.gov> Fixed -ksp_richardson_scale was ignored when PCApplyRichardson() was used Fix: turn off PCApplyRichardson() when scale is not 1 and print PetscInfo warning Reported-by: Mark Adams <mfadams@lbl.gov> Fixed missing carriage return in uses of PetscInfo() and missing ierr CHKERRQ() usage show more ... /petsc/config/BuildSystem/config/packages/SuiteSparse.py /petsc/include/petscerror.h /petsc/include/petscsys.h /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/impls/shell/dmshell.c /petsc/src/docs/tex/manual/part2.tex /petsc/src/docs/website/index.html /petsc/src/ksp/ksp/examples/tutorials/ex43.c /petsc/src/ksp/ksp/examples/tutorials/makefile /petsc/src/ksp/ksp/examples/tutorials/output/ex43_3.out /petsc/src/ksp/ksp/examples/tutorials/output/ex43_bjacobi.out /petsc/src/ksp/ksp/examples/tutorials/output/ex43_nested_gmg.out /petsc/src/ksp/ksp/impls/gmres/gmres.c /petsc/src/ksp/ksp/impls/rich/rich.c /petsc/src/ksp/ksp/impls/specest/specest.c /petsc/src/ksp/ksp/interface/iguess.c /petsc/src/ksp/pc/impls/factor/ilu/ilu.c /petsc/src/ksp/pc/impls/ml/ml.c /petsc/src/ksp/pc/impls/tfs/gs.c /petsc/src/ksp/pc/interface/precon.c /petsc/src/mat/examples/tests/ex99.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/aijfact.c /petsc/src/mat/impls/baij/mpi/mpibaij.c /petsc/src/mat/impls/baij/seq/baij.c /petsc/src/mat/impls/baij/seq/baijfact2.c /petsc/src/mat/impls/sbaij/seq/cholmod/sbaijcholmod.c /petsc/src/mat/impls/sbaij/seq/sbaij.c /petsc/src/mat/interface/matrix.c /petsc/src/snes/examples/tutorials/makefile /petsc/src/sys/classes/viewer/impls/socket/send.c /petsc/src/sys/error/err.c /petsc/src/sys/error/errtrace.c /petsc/src/sys/objects/options.c /petsc/src/tao/bound/impls/tron/tron.c /petsc/src/tao/interface/taosolver.c /petsc/src/tao/interface/taosolver_fg.c /petsc/src/tao/leastsquares/impls/pounders/pounders.c /petsc/src/tao/pde_constrained/impls/lcl/lcl.c /petsc/src/ts/impls/eimex/eimex.c is/sf/impls/window/sfwindow.c
76d63ea5	19-Dec-2014	Barry Smith <bsmith@mcs.anl.gov>	Allow PetscObjectViewFromOptions() to be called again even if previously it generated an error for use from Python Removed a couple of unneeded incall static checks from XXXViewFromOptions() routines /petsc/config/BuildSystem/config/packages/SuiteSparse.py /petsc/include/petscerror.h /petsc/src/dm/dt/interface/dtfe.c /petsc/src/mat/interface/matrix.c /petsc/src/sys/error/err.c /petsc/src/sys/error/errtrace.c /petsc/src/sys/objects/options.c is/is/utils/iscoloring.c vec/interface/vector.c
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