LOCDIR: fix all outdated paths and normalize trailing slash

Update performed by:

git ls-files '*/makefile' | xargs perl -pi -MFile::Basename \
-e 's!(LOCDIR[[:space:]]+=) *(.+)$!$1." ".dirnam

LOCDIR: fix all outdated paths and normalize trailing slash

Update performed by:

git ls-files '*/makefile' | xargs perl -pi -MFile::Basename \
-e 's!(LOCDIR[[:space:]]+=) *(.+)$!$1." ".dirname($ARGV)."/"!e'

Fortran auto must be fixed using 'make allfortranstubs' and the result
can be checked by 'bin/maint/checkloc.py'.

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flag should have been false

removed unnneeded and unused XXXRegisterDestroy() routines

removed PetscFunctionListDestroyAll() and put PetscFunctionListDestroy(&XXXList) into the package finalize

Merge branch 'barry/fix-matlab'

Fix PetscSFunctionList update to PetscSFList

Merge branch 'jed/sftypes'

* jed/sftypes:
PetscSF: split petscsftypes.h out of petscsf.h

Merge branch 'jed/fix-vecview-mpiio'

* jed/fix-vecview-mpiio:
VecView_MPI_Binary: add missing call to MPI_File_set_view()

VecView_MPI_Binary: add missing call to MPI_File_set_view()

Broken since feature was initially added in:

commit 617f0dbcfa0e0807e83c23b2a685058f063b6c6d
Author: Barry Smith <bsmith@mcs.anl.gov>

VecView_MPI_Binary: add missing call to MPI_File_set_view()

Broken since feature was initially added in:

commit 617f0dbcfa0e0807e83c23b2a685058f063b6c6d
Author: Barry Smith <bsmith@mcs.anl.gov>

added MPI IO version of VecView_Seq_Binary and VecView_MPI_Binary
changed Fortran PetscInitialize() so error from pxfgetarg in getting program name
does not cause program stopping error

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vscatcusp : fixed compiler warnings

This class had several variables that were not being used
in the method VecScatterInitializeForGPU. These are now
fixed.

PetscSF: split petscsftypes.h out of petscsf.h

Callers of PetscSF functions must now explicitly include petscsf.h.

fix PetscSFunctionList to PetscSFList wrongly created by bad regexp

Fixes for MATLAB interface. (1) Fixed MPIUni to be reentrant again, (2) fixed PetscSF to be reentrant

Merge branch 'jed/functionlist-nocast'

* jed/functionlist-nocast:
docs: simplify explanation of function lists/composition
PetscObjectQueryFunction: use macro to hide PetscVoidFunction* cast
P

Merge branch 'jed/functionlist-nocast'

* jed/functionlist-nocast:
docs: simplify explanation of function lists/composition
PetscObjectQueryFunction: use macro to hide PetscVoidFunction* cast
PetscFunctionListAdd: use macro to hide (PetscVoidFunction) cast
PetscFunctionListFind: use macro to hide (PetscVoidFunction*) cast

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Merge branch 'barry/rm-xxxregisterdynamic'

* barry/rm-xxxregisterdynamic:
Registration: remove stale 'XXRegisterDynamic)' entries in man pages
TS examples: fix use of PetscFunctionList and add t

Merge branch 'barry/rm-xxxregisterdynamic'

* barry/rm-xxxregisterdynamic:
Registration: remove stale 'XXRegisterDynamic)' entries in man pages
TS examples: fix use of PetscFunctionList and add to nightlies
Changes: Note updates to XRegisterDynamic/PetscObjectComposeFunctionDynamic
PetscObjectComposeFunctionDynamic: remove stale docs and usage
developers.tex: remove complications from function composition with dlls
removed string version of function name for XXXRegister(), PetscFunctionListAdd() and PetscObjectComposeFunction()
changes: document PetscFunctionListAdd() API change
developers.tex: update documentation of PetscObjectComposeFunction
removed path and MPI_Comm arguments from PetscFunctionListFind/Add()
removed path argument to XXXInitializePackage() and XXXRegister()
removed XXXRegisterDynamic() but kept the APIs for everything else underneath the same phase I of the update to handling registering function pointers

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PetscFunctionListAdd: use macro to hide (PetscVoidFunction) cast

Same rationale as the last commit:

Casting using PetscVoidFunction instead of (void(*)(void)) is needed
with C++ compilers that will

PetscFunctionListAdd: use macro to hide (PetscVoidFunction) cast

Same rationale as the last commit:

Casting using PetscVoidFunction instead of (void(*)(void)) is needed
with C++ compilers that will not implicitly convert C++ language linkage
to C language linkage. Since PetscFunctionListAdd() is meant to operate
on generic function pointers, we hide this language linkage detail
(which is inconsistently implemented) in a cast.

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PetscFunctionListFind: use macro to hide (PetscVoidFunction*) cast

Casting using PetscVoidFunction* instead of (void(**)(void)) is needed
with C++ compilers that will not implicitly convert C++ lang

PetscFunctionListFind: use macro to hide (PetscVoidFunction*) cast

Casting using PetscVoidFunction* instead of (void(**)(void)) is needed
with C++ compilers that will not implicitly convert C++ language linkage
to C language linkage. Since PetscFunctionListFind() is meant to operate
on generic function pointers, we hide this language linkage detail
(which is inconsistently implemented) in a cast.

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Merge branch 'jed/petscviewerhdf5-include-needed'

* jed/petscviewerhdf5-include-needed:
PetscViewerHDF5: examples that use HDF5 must include petscviewerhdf5.h

PetscViewerHDF5: examples that use HDF5 must include petscviewerhdf5.h

Merge branch 'cj/fix-petsccusp'

removed string version of function name for XXXRegister(), PetscFunctionListAdd() and PetscObjectComposeFunction()

removed path and MPI_Comm arguments from PetscFunctionListFind/Add()

removed path argument to XXXInitializePackage() and XXXRegister()

CUSP: Replaced MDot() operation with a faster variant.

removed XXXRegisterDynamic() but kept the APIs for everything else underneath the same
phase I of the update to handling registering function pointers