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2d50711803-Nov-2012 Satish Balay <balay@mcs.anl.gov>

reemove OBJSC and OBJSF from invididual makefiles and auto-define in conf/variables

Hg-commit: 2f01c17f3c19dc4b89aaf306cfd60a12312c270d


/petsc/bin/maint/generatefortranstubs.py
/petsc/conf/variables
/petsc/include/finclude/makefile
/petsc/include/finclude/petscmat.h
/petsc/include/makefile
/petsc/include/petsc-private/makefile
/petsc/include/sieve/makefile
/petsc/makefile
/petsc/src/contrib/agglom/makefile
/petsc/src/contrib/dvr/makefile
/petsc/src/contrib/fun3d/comp/makefile
/petsc/src/contrib/fun3d/incomp/makefile
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/petsc/src/dm/ao/impls/basic/ftn-custom/makefile
/petsc/src/dm/ao/impls/basic/makefile
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is/utils/ftn-custom/makefile
is/utils/makefile
pf/impls/constant/makefile
pf/impls/makefile
pf/impls/matlab/makefile
pf/impls/string/makefile
pf/interface/makefile
vec/impls/hypre/makefile
vec/impls/makefile
vec/impls/mpi/ftn-custom/makefile
vec/impls/mpi/makefile
vec/impls/mpi/mpicusp/makefile
vec/impls/nest/makefile
vec/impls/seq/f90-custom/makefile
vec/impls/seq/ftn-custom/makefile
vec/impls/seq/ftn-kernels/makefile
vec/impls/seq/makefile
vec/impls/seq/seqcusp/makefile
vec/impls/shared/makefile
vec/interface/f90-custom/makefile
vec/interface/ftn-custom/makefile
vec/interface/makefile
vec/utils/ftn-custom/makefile
vec/utils/makefile
vec/utils/matlab/makefile
vec/utils/veccusp/makefile
3fc9991903-Nov-2012 Satish Balay <balay@mcs.anl.gov>

fix formatting comments in 1586c0649cc3

Hg-commit: aec1d1a2348734ee869e01a9c36a16c46d2f3a4b

5d22b79602-Nov-2012 Jed Brown <jed@59A2.org>

Add missing ISRestoreIndices() to close missing leak in ISSetPermutation()

Hg-commit: 2c5ece3c5556e2abcff9a6c362d4d4a50f5c2a6e

4325cce702-Nov-2012 Matthew G Knepley <knepley@gmail.com>

Mat+Vec: Added VecChop() and MatChop() functions
- These are really useful for reproducible output

Hg-commit: 1586c0649cc33a5aa16480cfb33d35bdad0d5ade


/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/packages/txpetscgpu.py
/petsc/config/builder.py
/petsc/include/finclude/petscmat.h
/petsc/include/petsc-private/matimpl.h
/petsc/include/petsc-private/snesimpl.h
/petsc/include/petsc-private/vecimpl.h
/petsc/include/petscdmcomplex.h
/petsc/include/petscdraw.h
/petsc/include/petscksp.h
/petsc/include/petscmat.h
/petsc/include/petscsnes.h
/petsc/include/petscvec.h
/petsc/include/sieve/Mesh.hh
/petsc/src/dm/ao/impls/mapping/aomapping.c
/petsc/src/dm/impls/complex/complex.c
/petsc/src/dm/impls/complex/complexexodusii.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/index.html
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/ksp/interface/iterativ.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/pc/impls/ainvcusp/ainvcusp.cu
/petsc/src/ksp/pc/impls/sacusp/sacusp.cu
/petsc/src/ksp/pc/impls/sacusp/sacusppoly.cu
/petsc/src/mat/examples/tests/ex101.c
/petsc/src/mat/examples/tests/ex169.c
/petsc/src/mat/examples/tests/ex96.c
/petsc/src/mat/examples/tests/makefile
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/makefile
/petsc/src/mat/impls/aij/seq/matmatmatmult.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/seqcusp/aijcusp.cu
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/elemental/matelem.cxx
/petsc/src/mat/impls/maij/maij.c
/petsc/src/mat/impls/maij/maij.h
/petsc/src/mat/impls/shell/shell.c
/petsc/src/mat/interface/dlregismat.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/order/qmdqt.c
/petsc/src/mat/order/qmdrch.c
/petsc/src/mat/order/rootls.c
/petsc/src/mat/utils/axpy.c
/petsc/src/snes/examples/tutorials/ex31.c
/petsc/src/snes/examples/tutorials/ex5.c
/petsc/src/snes/examples/tutorials/ex62.c
/petsc/src/snes/examples/tutorials/output/ex31_2.out
/petsc/src/snes/examples/tutorials/output/ex31_3.out
/petsc/src/snes/examples/tutorials/output/ex31_4.out
/petsc/src/snes/examples/tutorials/output/ex31_5.out
/petsc/src/snes/impls/test/snestest.c
/petsc/src/snes/interface/makefile
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesob.c
/petsc/src/snes/linesearch/impls/bt/linesearchbt.c
/petsc/src/snes/linesearch/impls/l2/linesearchl2.c
/petsc/src/snes/utils/dmdasnes.c
/petsc/src/snes/utils/dmsnes.c
/petsc/src/sys/draw/impls/x/xops.c
/petsc/src/sys/draw/utils/dscatter.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex1.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex3.c
/petsc/src/ts/examples/tutorials/ex11.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tseig.c
vec/utils/vecio.c
15a372df27-Oct-2012 Matthew G Knepley <knepley@gmail.com>

Small compiler fix

Hg-commit: a33725d72673b2765bbdec543dc2d8288ee1dff5

9ba4b30027-Oct-2012 Jed Brown <jed@59A2.org>

Remove some unused variables from kernels

Hg-commit: 9d2eee67b8197e2122d2e091fc41363d695c813a

ab094d6827-Oct-2012 Jed Brown <jed@59A2.org>

Fix indexing bugs in VecMDot

Hg-commit: c4d7abbd0bb71c29ee19f2a945291912a606f790


/petsc/bin/maint/latexinexamples.py
/petsc/config/PETSc/packages/MUMPS.py
/petsc/config/PETSc/packages/PTScotch.py
/petsc/config/builder.py
/petsc/include/finclude/petscsys.h
/petsc/include/petsc-private/compleximpl.h
/petsc/include/petsc-private/matimpl.h
/petsc/include/petsc-private/vecimpl.h
/petsc/include/petscdm.h
/petsc/include/petscdmcomplex.h
/petsc/include/petscerror.h
/petsc/include/petscts.h
/petsc/include/petscversion.h
/petsc/include/sieve/Mesh.hh
/petsc/src/dm/impls/complex/complex.c
/petsc/src/dm/impls/complex/complexcreate.c
/petsc/src/dm/impls/complex/complexvtk.c
/petsc/src/dm/impls/da/gr2.c
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/website/download/index.html
/petsc/src/ksp/ksp/examples/tutorials/ex10.c
/petsc/src/ksp/ksp/interface/xmon.c
/petsc/src/ksp/ksp/utils/schurm.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpiaij.h
/petsc/src/mat/impls/aij/mpi/mpiptap.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/matptap.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/utils/makefile
/petsc/src/snes/examples/tutorials/ex14.c
/petsc/src/snes/examples/tutorials/ex30.c
/petsc/src/snes/examples/tutorials/ex31.c
/petsc/src/snes/utils/dmsnes.c
/petsc/src/sys/draw/impls/x/xinit.c
/petsc/src/sys/draw/impls/x/xops.c
/petsc/src/sys/draw/interface/draw.c
/petsc/src/sys/draw/interface/drawreg.c
/petsc/src/sys/draw/interface/dviewp.c
/petsc/src/sys/draw/utils/lgc.c
/petsc/src/sys/draw/utils/zoom.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/threadcomm/interface/threadcomm.c
/petsc/src/sys/threadcomm/interface/threadcommred.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex1.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex2.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex3.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex4.c
/petsc/src/ts/examples/tutorials/advection-diffusion-reaction/ex5.c
/petsc/src/ts/interface/makefile
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tseig.c
vec/impls/seq/dvec2.c
40e8a23923-Oct-2012 Matthew G Knepley <knepley@gmail.com>

PetscSection+DMComplex: Added a map back to the original point numbering for a submesh
- Data member is subpointMap, a sorted IS
- Added DMComplexGetSubpointMap()
- Added PetscSectionCreateSubmeshSec

PetscSection+DMComplex: Added a map back to the original point numbering for a submesh
- Data member is subpointMap, a sorted IS
- Added DMComplexGetSubpointMap()
- Added PetscSectionCreateSubmeshSection()
- Fixed bug in PetscSectionGetOffsetRange()
- Added PetscSectionSetOffset() and PetscSectionSetFieldOffset()

Hg-commit: 4ed995dd3c94af005ae2cc7ef174bc641e9023af

show more ...

b3fa72c122-Oct-2012 Barry Smith <bsmith@mcs.anl.gov>

ascii view vectors with float128 fixed

Hg-commit: 22f8ea6471bac0b628e0fd7978abc71b9c43e0f7

63de5a3120-Oct-2012 Jed Brown <jed@59A2.org>

ISStrideSetStride_Stride: initialize is->min, is->max for zero-sized index sets

Hg-commit: 131e5b49c039e7d31d6e1cca314c7104378a9ce1

f314fee820-Oct-2012 Jed Brown <jed@59A2.org>

Make VecPermute work for parallel ISs provided the index values are local

Hg-commit: bc906b1c28b126f9d78787e7927b1d05aa0b1041

63f4a73220-Oct-2012 Jed Brown <jed@59A2.org>

Add PetscSFSetGraphLayout()

Specifies root space by PetscLayout and uses global indices for the edges.

Hg-commit: 6171404c2c0700d756bd8073438391b70472e8ca


/petsc/conf/rules
/petsc/config/PETSc/packages/threadcomm.py
/petsc/config/builder.py
/petsc/include/finclude/petscksp.h
/petsc/include/finclude/petscsnes.h
/petsc/include/petsc-private/matimpl.h
/petsc/include/petsc-private/vecimpl.h
/petsc/include/petscksp.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/include/petscsf.h
/petsc/include/petscsnes.h
/petsc/include/petscts.h
/petsc/makefile
/petsc/src/dm/examples/tests/ex33.c
/petsc/src/dm/impls/complex/complex.c
/petsc/src/dm/impls/da/hypre/mhyp.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/developers/projects.html
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/documentation/installation.html
/petsc/src/ksp/ksp/impls/lsqr/lsqr.c
/petsc/src/ksp/ksp/interface/ftn-custom/zitfuncf.c
/petsc/src/ksp/ksp/interface/ftn-custom/zxonf.c
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/ksp/interface/iterativ.c
/petsc/src/ksp/ksp/interface/itfunc.c
/petsc/src/ksp/ksp/interface/xmon.c
/petsc/src/ksp/pc/impls/asm/asm.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/gasm/gasm.c
/petsc/src/mat/color/color.c
/petsc/src/mat/color/color.h
/petsc/src/mat/color/degr.c
/petsc/src/mat/color/ido.c
/petsc/src/mat/color/seq.c
/petsc/src/mat/color/slo.c
/petsc/src/mat/examples/tests/ex108.c
/petsc/src/mat/examples/tests/ex96.c
/petsc/src/mat/impls/adj/mpi/mpiadj.c
/petsc/src/mat/impls/aij/mpi/fdmpiaij.c
/petsc/src/mat/impls/aij/mpi/ftn-custom/zmpiaijf.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/seq/aij.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/fdaij.c
/petsc/src/mat/impls/aij/seq/inode.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/baij/mpi/ftn-custom/zmpibaijf.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/baij.c
/petsc/src/mat/impls/sbaij/seq/sbaij.c
/petsc/src/mat/interface/f90-custom/zmatrixf90.c
/petsc/src/mat/interface/ftn-custom/zmatrixf.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/order/amd/amd.c
/petsc/src/mat/order/degree.c
/petsc/src/mat/order/fndsep.c
/petsc/src/mat/order/gen1wd.c
/petsc/src/mat/order/gennd.c
/petsc/src/mat/order/genqmd.c
/petsc/src/mat/order/genrcm.c
/petsc/src/mat/order/order.h
/petsc/src/mat/order/qmdmrg.c
/petsc/src/mat/order/qmdqt.c
/petsc/src/mat/order/qmdrch.c
/petsc/src/mat/order/qmdupd.c
/petsc/src/mat/order/rcm.c
/petsc/src/mat/order/rootls.c
/petsc/src/mat/order/sorder.c
/petsc/src/mat/order/sp1wd.c
/petsc/src/mat/order/spnd.c
/petsc/src/mat/order/spqmd.c
/petsc/src/mat/order/sprcm.c
/petsc/src/mat/utils/gcreate.c
/petsc/src/snes/impls/ls/ls.c
/petsc/src/snes/interface/ftn-custom/zsnesf.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/utils/dmdasnes.c
/petsc/src/sys/draw/utils/lg.c
/petsc/src/sys/objects/pinit.c
/petsc/src/ts/interface/ts.c
vec/impls/mpi/pmap.c
/petsc/systems/Apple/OSX/bin/makedmg
6113493d16-Oct-2012 Barry Smith <bsmith@mcs.anl.gov>

PetscOptionsVec() ALWAYS zeros the vector before the user possible fills it? I don't think so!

Hg-commit: d0cf9b61dc3ab2985464ccea625e68cce43ae1df

43f9ffa714-Oct-2012 Jed Brown <jed@59A2.org>

Fix PetscOptionsVec() to work with complex and to handle parallel vectors

Hg-commit: 1e5182dc93579031a00f305f50eaec4f242af847

f5ffc2d711-Oct-2012 Barry Smith <bsmith@mcs.anl.gov>

commit after merge

Hg-commit: b75fbbe8f7256efa18758147a126dd6ea59a7d44

ab35270011-Oct-2012 Barry Smith <bsmith@mcs.anl.gov>

added PetscOptionsVec()

Hg-commit: e3a7deff021839e60b7ec9e05ed883d54076a9fa


/petsc/bin/TOPSInstaller.py
/petsc/conf/test
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/packages/X.py
/petsc/config/PETSc/packages/clique.py
/petsc/config/PETSc/packages/elemental.py
/petsc/config/PETSc/packages/metis.py
/petsc/config/PETSc/packages/parmetis.py
/petsc/config/PETSc/utilities/languages.py
/petsc/config/cmakeboot.py
/petsc/config/cmakegen.py
/petsc/config/examples/arch-bgp-ibm-opt.py
/petsc/config/examples/arch-freebsd-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-freebsd-cxx-pkgs-opt.py
/petsc/config/examples/arch-freebsd-pkgs-opt.py
/petsc/config/examples/arch-linux-gcc-absoft.py
/petsc/config/examples/arch-linux-pkgs-cxx-mlib.py
/petsc/config/examples/arch-linux-pkgs-dbg-ftn-interfaces.py
/petsc/config/examples/arch-linux-pkgs-gcov.py
/petsc/config/examples/arch-linux-pkgs-opt.py
/petsc/config/examples/arch-linux-pkgs-valgrind.py
/petsc/config/examples/arch-opensolaris-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-opensolaris-cxx-pkgs-opt.py
/petsc/config/examples/arch-opensolaris-pkgs-opt.py
/petsc/config/examples/arch-osx-10.6-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-osx-10.6-cxx-pkgs-opt.py
/petsc/include/finclude/petscpcdef.h
/petsc/include/petsc-private/snesimpl.h
/petsc/include/petscdraw.h
/petsc/include/petscerror.h
/petsc/include/petsclog.h
/petsc/include/petscpc.h
/petsc/include/petscts.h
/petsc/include/petscvec.h
/petsc/include/sieve/Mesh.hh
/petsc/src/dm/impls/complex/complex.c
/petsc/src/dm/impls/complex/complexcreate.c
/petsc/src/dm/impls/patch/patch.c
/petsc/src/docs/tex/manual/acknowl.tex
/petsc/src/docs/tex/manual/intro.tex
/petsc/src/docs/tex/manual/part1.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/ams.html
/petsc/src/docs/website/documentation/bugreporting.html
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/codemanagement.html
/petsc/src/docs/website/documentation/copyright.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/documentation/index.html
/petsc/src/docs/website/documentation/installation.html
/petsc/src/docs/website/documentation/linearsolvertable.html
/petsc/src/docs/website/documentation/referencing.html
/petsc/src/docs/website/documentation/tutorials/index.html
/petsc/src/docs/website/download/index.html
/petsc/src/docs/website/index.html
/petsc/src/docs/website/miscellaneous/acknwldg.html
/petsc/src/docs/website/miscellaneous/external.html
/petsc/src/docs/website/publications/index.html
/petsc/src/ksp/ksp/examples/tutorials/ex56.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddc.h
/petsc/src/ksp/pc/impls/makefile
/petsc/src/ksp/pc/interface/pcregis.c
/petsc/src/mat/impls/adj/mpi/mpiadj.c
/petsc/src/mat/impls/aij/mpi/mpicusp/mpiaijcusp.cu
/petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu
/petsc/src/mat/impls/aij/mpi/pastix/pastix.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/seqcusp/aijcusp.cu
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/snes/interface/snesut.c
/petsc/src/snes/utils/dmdasnes.c
/petsc/src/snes/utils/dmsnes.c
/petsc/src/sys/draw/impls/opengl/openglops.c
/petsc/src/sys/draw/impls/x/xops.c
/petsc/src/sys/draw/interface/draw.c
/petsc/src/sys/draw/interface/dsetpause.c
/petsc/src/sys/draw/utils/lg.c
/petsc/src/sys/draw/utils/lgc.c
/petsc/src/sys/objects/ftn-custom/zstart.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/utils/sorti.c
/petsc/src/ts/examples/tests/makefile
/petsc/src/ts/examples/tutorials/ex2.c
/petsc/src/ts/examples/tutorials/ex21.c
/petsc/src/ts/examples/tutorials/ex2f.F
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/interface/ts.c
vec/interface/vector.c
1f58896411-Oct-2012 Matthew G Knepley <knepley@gmail.com>

DM and PetscSection: Some fixes
DM: Now allocate vectors with correct blocksize for PetscSection
PetscSection: Change constrained indices to const PetscInt []
DMComplex: Fixed block size bug in Jacob

DM and PetscSection: Some fixes
DM: Now allocate vectors with correct blocksize for PetscSection
PetscSection: Change constrained indices to const PetscInt []
DMComplex: Fixed block size bug in Jacobian preallocation
- Remove PetscLogFlopsNoError()

Hg-commit: e7cad248ffe212c2b7d4543a540d74d5b91b4efd

show more ...


/petsc/bin/TOPSInstaller.py
/petsc/conf/test
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/packages/X.py
/petsc/config/PETSc/packages/clique.py
/petsc/config/PETSc/packages/elemental.py
/petsc/config/PETSc/packages/metis.py
/petsc/config/PETSc/packages/parmetis.py
/petsc/config/PETSc/utilities/languages.py
/petsc/config/cmakeboot.py
/petsc/config/cmakegen.py
/petsc/config/examples/arch-bgp-ibm-opt.py
/petsc/config/examples/arch-freebsd-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-freebsd-cxx-pkgs-opt.py
/petsc/config/examples/arch-freebsd-pkgs-opt.py
/petsc/config/examples/arch-linux-gcc-absoft.py
/petsc/config/examples/arch-linux-pkgs-cxx-mlib.py
/petsc/config/examples/arch-linux-pkgs-dbg-ftn-interfaces.py
/petsc/config/examples/arch-linux-pkgs-gcov.py
/petsc/config/examples/arch-linux-pkgs-opt.py
/petsc/config/examples/arch-linux-pkgs-valgrind.py
/petsc/config/examples/arch-opensolaris-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-opensolaris-cxx-pkgs-opt.py
/petsc/config/examples/arch-opensolaris-pkgs-opt.py
/petsc/config/examples/arch-osx-10.6-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-osx-10.6-cxx-pkgs-opt.py
/petsc/include/finclude/petscpcdef.h
/petsc/include/petsc-private/snesimpl.h
/petsc/include/petsc-private/vecimpl.h
/petsc/include/petscdraw.h
/petsc/include/petscerror.h
/petsc/include/petsclog.h
/petsc/include/petscpc.h
/petsc/include/petscts.h
/petsc/include/sieve/ISieve.hh
/petsc/include/sieve/Mesh.hh
/petsc/src/dm/impls/complex/complex.c
/petsc/src/dm/impls/complex/complexcreate.c
/petsc/src/dm/impls/mesh/mesh.c
/petsc/src/dm/impls/patch/patch.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/manual/acknowl.tex
/petsc/src/docs/tex/manual/intro.tex
/petsc/src/docs/tex/manual/part1.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/ams.html
/petsc/src/docs/website/documentation/bugreporting.html
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/codemanagement.html
/petsc/src/docs/website/documentation/copyright.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/documentation/index.html
/petsc/src/docs/website/documentation/installation.html
/petsc/src/docs/website/documentation/linearsolvertable.html
/petsc/src/docs/website/documentation/referencing.html
/petsc/src/docs/website/documentation/tutorials/index.html
/petsc/src/docs/website/download/index.html
/petsc/src/docs/website/index.html
/petsc/src/docs/website/miscellaneous/acknwldg.html
/petsc/src/docs/website/miscellaneous/external.html
/petsc/src/docs/website/publications/index.html
/petsc/src/ksp/ksp/examples/tutorials/ex56.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddc.h
/petsc/src/ksp/pc/impls/makefile
/petsc/src/ksp/pc/interface/pcregis.c
/petsc/src/mat/impls/adj/mpi/mpiadj.c
/petsc/src/mat/impls/aij/mpi/mpicusp/mpiaijcusp.cu
/petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu
/petsc/src/mat/impls/aij/mpi/pastix/pastix.c
/petsc/src/mat/impls/aij/seq/matmatmult.c
/petsc/src/mat/impls/aij/seq/seqcusp/aijcusp.cu
/petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/snes/interface/snesut.c
/petsc/src/snes/utils/dmdasnes.c
/petsc/src/snes/utils/dmsnes.c
/petsc/src/sys/draw/utils/lg.c
/petsc/src/sys/draw/utils/lgc.c
/petsc/src/sys/objects/ftn-custom/zstart.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/utils/sorti.c
/petsc/src/ts/examples/tests/makefile
/petsc/src/ts/examples/tutorials/ex2.c
/petsc/src/ts/examples/tutorials/ex21.c
/petsc/src/ts/examples/tutorials/ex2f.F
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/interface/ts.c
vec/impls/seq/vsection.c
49b734d204-Oct-2012 Barry Smith <bsmith@mcs.anl.gov>

changed two ISXXX macro functions to true functions

Hg-commit: 048c0214329050bd77be87038febee80d31e2011

6f8b0bcc03-Oct-2012 Barry Smith <bsmith@mcs.anl.gov>

commit after merge

Hg-commit: de692b24285e65d10711c139758fd9affe8cde4e

2150357e03-Oct-2012 Barry Smith <bsmith@mcs.anl.gov>

fixed formating of variable declarations messed up by putting const int XXXType
fixed DMDAGet/SetCoordinates() that matt did not remove

Hg-commit: de8db80506612f87fb4b9c77dd85f76c605a3942


/petsc/include/petsc-private/daimpl.h
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petscdmda.h
/petsc/src/dm/examples/tests/ex15.c
/petsc/src/dm/examples/tests/ex2.c
/petsc/src/dm/examples/tests/ex21.c
/petsc/src/dm/examples/tests/ex22.c
/petsc/src/dm/examples/tests/ex23.c
/petsc/src/dm/examples/tests/ex27.c
/petsc/src/dm/examples/tests/ex28.c
/petsc/src/dm/examples/tests/ex32.c
/petsc/src/dm/examples/tests/ex33.c
/petsc/src/dm/examples/tests/ex4.c
/petsc/src/dm/examples/tests/ex6.c
/petsc/src/dm/examples/tests/ex7.c
/petsc/src/dm/examples/tests/ex8.c
/petsc/src/dm/examples/tests/ex9.c
/petsc/src/dm/examples/tutorials/ex1.c
/petsc/src/dm/examples/tutorials/ex12.c
/petsc/src/dm/examples/tutorials/ex2.c
/petsc/src/dm/examples/tutorials/ex3.c
/petsc/src/dm/examples/tutorials/ex4.c
/petsc/src/dm/examples/tutorials/ex5.c
/petsc/src/dm/impls/da/da1.c
/petsc/src/dm/impls/da/da2.c
/petsc/src/dm/impls/da/da3.c
/petsc/src/dm/impls/da/dacorn.c
/petsc/src/dm/impls/da/fdda.c
/petsc/src/dm/impls/da/gr1.c
/petsc/src/dm/impls/da/hypre/mhyp.c
/petsc/src/dm/impls/iga/iga.c
/petsc/src/dm/impls/mesh/meshpcice.c
/petsc/src/dm/interface/dm.c
/petsc/src/ksp/ksp/examples/tests/ex10.c
/petsc/src/ksp/ksp/interface/itcl.c
/petsc/src/ksp/pc/examples/tests/ex2.c
/petsc/src/ksp/pc/examples/tests/ex3.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/factor/factimpl.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/mg/mgfunc.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/examples/tests/ex114.c
/petsc/src/mat/examples/tests/ex136.c
/petsc/src/mat/examples/tests/ex140.c
/petsc/src/mat/examples/tests/ex37.c
/petsc/src/mat/examples/tests/ex55.c
/petsc/src/mat/examples/tests/ex57.c
/petsc/src/mat/examples/tests/ex73.c
/petsc/src/mat/examples/tests/ex74.c
/petsc/src/mat/examples/tests/ex75.c
/petsc/src/mat/examples/tutorials/ex1.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/snes/examples/tests/ex7.c
/petsc/src/snes/examples/tutorials/ex10d/ex10.c
/petsc/src/snes/examples/tutorials/ex30.c
/petsc/src/snes/examples/tutorials/ex48.c
/petsc/src/snes/impls/qn/qn.c
/petsc/src/sys/shell/interface/sysshell.c
/petsc/src/sys/viewer/impls/vtk/vtkvimpl.h
/petsc/src/sys/viewer/interface/view.c
/petsc/src/ts/characteristic/impls/da/slda.c
/petsc/src/ts/characteristic/interface/characteristic.c
/petsc/src/ts/examples/tests/ex3.c
/petsc/src/ts/examples/tests/ex4.c
/petsc/src/ts/examples/tests/ex5.c
/petsc/src/ts/examples/tutorials/ex10.c
/petsc/src/ts/examples/tutorials/ex14.c
/petsc/src/ts/examples/tutorials/ex9.c
/petsc/src/ts/impls/implicit/sundials/sundials.c
/petsc/src/ts/impls/pseudo/posindep.c
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/ts/interface/ts.c
is/utils/isdiff.c
vec/impls/nest/vecnest.c
09dba1e603-Oct-2012 Shri Abhyankar <abhyshr@mcs.anl.gov>

Added vector operations using threadcomm. Currently guarded by PETSC_THREADCOMM_ACTIVE flag.

Hg-commit: a7b659863965ef8b0240211642ec180b5e9e3b46

f4aac21503-Oct-2012 Barry Smith <bsmith@mcs.anl.gov>

generate error if PetscRegisterFinalize() called twice with same function

Hg-commit: b3a861afb6cddea0d354e7b2ac29cccad28b75ff

19fd82e903-Oct-2012 Barry Smith <bsmith@mcs.anl.gov>

changed #define char* XXXType to typedef const char* XXXType

Hg-commit: 2f1984a65b4f21a886ea1c854235ca6d51deefad


/petsc/config/PETSc/packages/MUMPS.py
/petsc/config/PETSc/packages/PTScotch.py
/petsc/config/PETSc/packages/SCALAPACK.py
/petsc/config/PETSc/packages/SuperLU.py
/petsc/config/PETSc/packages/X.py
/petsc/config/PETSc/packages/blacs.py
/petsc/config/PETSc/packages/openmp.py
/petsc/config/builder.py
/petsc/include/finclude/ftn-custom/petscdmcomplex.h90
/petsc/include/finclude/petscmat.h
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petsc-private/matimpl.h
/petsc/include/petsc-private/snesimpl.h
/petsc/include/petscao.h
/petsc/include/petsccharacteristic.h
/petsc/include/petscdm.h
/petsc/include/petscdmadda.h
/petsc/include/petscdmda.h
/petsc/include/petscdmmesh.h
/petsc/include/petscdmmesh.hh
/petsc/include/petscdmshell.h
/petsc/include/petscdraw.h
/petsc/include/petscerror.h
/petsc/include/petscis.h
/petsc/include/petscksp.h
/petsc/include/petscmat.h
/petsc/include/petscpc.h
/petsc/include/petscpf.h
/petsc/include/petscsnes.h
/petsc/include/petscsys.h
/petsc/include/petscthreadcomm.h
/petsc/include/petscts.h
/petsc/include/petscvec.h
/petsc/include/petscviewer.h
/petsc/include/sieve/Completion.hh
/petsc/include/sieve/Mesh.hh
/petsc/include/sieve/Partitioner.hh
/petsc/include/sieve/Selection.hh
/petsc/src/dm/ao/interface/aoreg.c
/petsc/src/dm/examples/tests/ex10.c
/petsc/src/dm/examples/tests/ex11.c
/petsc/src/dm/examples/tests/ex21.c
/petsc/src/dm/examples/tests/ex27.c
/petsc/src/dm/examples/tests/ex28.c
/petsc/src/dm/examples/tests/ex32.c
/petsc/src/dm/examples/tests/ex36.c
/petsc/src/dm/examples/tutorials/ex3.c
/petsc/src/dm/impls/adda/adda.c
/petsc/src/dm/impls/akkt/dmakkt.c
/petsc/src/dm/impls/complex/complex.c
/petsc/src/dm/impls/complex/complexcreate.c
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/composite/packimpl.h
/petsc/src/dm/impls/composite/packm.c
/petsc/src/dm/impls/da/da.c
/petsc/src/dm/impls/da/da1.c
/petsc/src/dm/impls/da/da2.c
/petsc/src/dm/impls/da/da3.c
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/da/daview.c
/petsc/src/dm/impls/da/fdda.c
/petsc/src/dm/impls/iga/iga.c
/petsc/src/dm/impls/iga/igacreate.c
/petsc/src/dm/impls/mesh/mesh.c
/petsc/src/dm/impls/mesh/meshcreate.c
/petsc/src/dm/impls/patch/patch.c
/petsc/src/dm/impls/patch/patchcreate.c
/petsc/src/dm/impls/redundant/dmredundant.c
/petsc/src/dm/impls/shell/dmshell.c
/petsc/src/dm/impls/sliced/sliced.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/manual/part1.tex
/petsc/src/docs/tex/petsc.bib
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/ksp/examples/tests/ex10.c
/petsc/src/ksp/ksp/examples/tutorials/ex42.c
/petsc/src/ksp/ksp/examples/tutorials/ex43.c
/petsc/src/ksp/ksp/examples/tutorials/ex49.c
/petsc/src/ksp/ksp/examples/tutorials/ex56.c
/petsc/src/ksp/ksp/examples/tutorials/ex59.c
/petsc/src/ksp/ksp/impls/gmres/gmres.c
/petsc/src/ksp/ksp/interface/itcreate.c
/petsc/src/ksp/pc/examples/tests/ex2.c
/petsc/src/ksp/pc/examples/tests/ex3.c
/petsc/src/ksp/pc/impls/bddc/bddc.c
/petsc/src/ksp/pc/impls/bddc/bddc.h
/petsc/src/ksp/pc/impls/bicgstabcusp/bicgstabcusp.cu
/petsc/src/ksp/pc/impls/composite/composite.c
/petsc/src/ksp/pc/impls/factor/cholesky/cholesky.c
/petsc/src/ksp/pc/impls/factor/factimpl.c
/petsc/src/ksp/pc/impls/factor/factor.c
/petsc/src/ksp/pc/impls/factor/factor.h
/petsc/src/ksp/pc/impls/factor/icc/icc.c
/petsc/src/ksp/pc/impls/factor/ilu/ilu.c
/petsc/src/ksp/pc/impls/factor/lu/lu.c
/petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c
/petsc/src/ksp/pc/impls/gamg/gamg.c
/petsc/src/ksp/pc/impls/is/pcis.c
/petsc/src/ksp/pc/impls/is/pcis.h
/petsc/src/ksp/pc/impls/mg/mg.c
/petsc/src/ksp/pc/impls/mg/mgfunc.c
/petsc/src/ksp/pc/impls/sacusp/sacusp.cu
/petsc/src/ksp/pc/impls/sacusp/sacusppoly.cu
/petsc/src/ksp/pc/impls/sor/sor.c
/petsc/src/ksp/pc/interface/pcset.c
/petsc/src/ksp/pc/interface/precon.c
/petsc/src/mat/coarsen/coarsen.c
/petsc/src/mat/color/color.c
/petsc/src/mat/examples/tests/ex114.c
/petsc/src/mat/examples/tests/ex129.c
/petsc/src/mat/examples/tests/ex134.c
/petsc/src/mat/examples/tests/ex135.c
/petsc/src/mat/examples/tests/ex136.c
/petsc/src/mat/examples/tests/ex140.c
/petsc/src/mat/examples/tests/ex22.c
/petsc/src/mat/examples/tests/ex37.c
/petsc/src/mat/examples/tests/ex55.c
/petsc/src/mat/examples/tests/ex57.c
/petsc/src/mat/examples/tests/ex73.c
/petsc/src/mat/examples/tests/ex74.c
/petsc/src/mat/examples/tests/ex75.c
/petsc/src/mat/examples/tutorials/ex1.c
/petsc/src/mat/impls/adj/mpi/mpiadj.c
/petsc/src/mat/impls/aij/mpi/crl/mcrl.c
/petsc/src/mat/impls/aij/mpi/csrperm/mpicsrperm.c
/petsc/src/mat/impls/aij/mpi/mpiaij.c
/petsc/src/mat/impls/aij/mpi/mpicusp/mpiaijAssemble.cu
/petsc/src/mat/impls/aij/mpi/mumps/makefile
/petsc/src/mat/impls/aij/mpi/mumps/mumps.c
/petsc/src/mat/impls/aij/seq/aij.h
/petsc/src/mat/impls/aij/seq/aijfact.c
/petsc/src/mat/impls/aij/seq/crl/crl.c
/petsc/src/mat/impls/aij/seq/csrperm/csrperm.c
/petsc/src/mat/impls/aij/seq/superlu/makefile
/petsc/src/mat/impls/aij/seq/superlu/superlu.c
/petsc/src/mat/impls/baij/mpi/bstream/mpibstream.c
/petsc/src/mat/impls/baij/mpi/mpibaij.c
/petsc/src/mat/impls/baij/seq/aijbaij.c
/petsc/src/mat/impls/baij/seq/bstream/bstream.c
/petsc/src/mat/impls/dense/mpi/mpidense.c
/petsc/src/mat/impls/elemental/matelem.cxx
/petsc/src/mat/impls/fft/fft.c
/petsc/src/mat/impls/mffd/mffd.c
/petsc/src/mat/impls/nest/matnest.c
/petsc/src/mat/impls/sbaij/mpi/mpisbaij.c
/petsc/src/mat/impls/sbaij/mpi/sbstream/mpisbstream.c
/petsc/src/mat/impls/sbaij/seq/aijsbaij.c
/petsc/src/mat/impls/sbaij/seq/sbaijfact.c
/petsc/src/mat/impls/sbaij/seq/sbstream/sbstream.c
/petsc/src/mat/impls/shell/shell.c
/petsc/src/mat/impls/shell/shellcnv.c
/petsc/src/mat/interface/matreg.c
/petsc/src/mat/interface/matrix.c
/petsc/src/mat/order/amd/amd.c
/petsc/src/mat/order/sorder.c
/petsc/src/mat/order/sp1wd.c
/petsc/src/mat/order/spnd.c
/petsc/src/mat/order/spqmd.c
/petsc/src/mat/order/sprcm.c
/petsc/src/mat/order/sregis.c
/petsc/src/mat/partition/partition.c
/petsc/src/mat/utils/convert.c
/petsc/src/snes/examples/tests/ex7.c
/petsc/src/snes/examples/tutorials/ex10d/ex10.c
/petsc/src/snes/examples/tutorials/ex22.c
/petsc/src/snes/examples/tutorials/ex31.c
/petsc/src/snes/examples/tutorials/ex33.c
/petsc/src/snes/examples/tutorials/ex46.c
/petsc/src/snes/examples/tutorials/ex48.c
/petsc/src/snes/examples/tutorials/ex5.c
/petsc/src/snes/examples/tutorials/ex54.c
/petsc/src/snes/examples/tutorials/ex55.c
/petsc/src/snes/examples/tutorials/ex61.c
/petsc/src/snes/examples/tutorials/ex62.c
/petsc/src/snes/examples/tutorials/ex63.c
/petsc/src/snes/examples/tutorials/ex633D_DB.c
/petsc/src/snes/examples/tutorials/ex64.c
/petsc/src/snes/examples/tutorials/ex65.c
/petsc/src/snes/examples/tutorials/ex653D.c
/petsc/src/snes/examples/tutorials/ex9.c
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/examples/tutorials/output/ex31_0.out
/petsc/src/snes/examples/tutorials/output/ex5_5_aspin.out
/petsc/src/snes/examples/tutorials/output/ex5_5_nasm.out
/petsc/src/snes/impls/makefile
/petsc/src/snes/impls/ms/ms.c
/petsc/src/snes/impls/nasm/makefile
/petsc/src/snes/impls/nasm/nasm.c
/petsc/src/snes/interface/snes.c
/petsc/src/snes/interface/snesregi.c
/petsc/src/snes/linesearch/interface/linesearch.c
/petsc/src/snes/utils/dmdasnes.c
/petsc/src/snes/utils/dmsnes.c
/petsc/src/sys/draw/interface/drawreg.c
/petsc/src/sys/error/pstack.c
/petsc/src/sys/memory/mtr.c
/petsc/src/sys/objects/init.c
/petsc/src/sys/objects/pinit.c
/petsc/src/sys/random/interface/randreg.c
/petsc/src/sys/threadcomm/impls/pthread/tcpthread.c
/petsc/src/sys/threadcomm/interface/threadcomm.c
/petsc/src/sys/utils/sorti.c
/petsc/src/sys/viewer/interface/view.c
/petsc/src/sys/viewer/interface/viewreg.c
/petsc/src/ts/adapt/interface/tsadapt.c
/petsc/src/ts/characteristic/interface/characteristic.c
/petsc/src/ts/examples/tests/ex3.c
/petsc/src/ts/examples/tests/ex4.c
/petsc/src/ts/examples/tests/ex5.c
/petsc/src/ts/examples/tutorials/ex23.c
/petsc/src/ts/impls/arkimex/arkimex.c
/petsc/src/ts/impls/explicit/ssp/ssp.c
/petsc/src/ts/impls/implicit/gl/gl.c
/petsc/src/ts/impls/implicit/gl/gladapt.c
/petsc/src/ts/impls/implicit/sundials/sundials.c
/petsc/src/ts/impls/implicit/theta/theta.c
/petsc/src/ts/impls/pseudo/posindep.c
/petsc/src/ts/impls/rosw/rosw.c
/petsc/src/ts/interface/ts.c
/petsc/src/ts/interface/tsreg.c
is/interface/isreg.c
pf/interface/pf.c
vec/impls/nest/vecnest.c
vec/interface/vecreg.c
vec/interface/vector.c
5d76e66028-Sep-2012 Matthew G Knepley <knepley@gmail.com>

DMComplex: changes for new DM coordinate handling, new setup order
- Now DMComplexSetChart() sets chart for cone and support sections, and DMComplexSymmetrize() does not set the chart
- Now DMSetUp()

DMComplex: changes for new DM coordinate handling, new setup order
- Now DMComplexSetChart() sets chart for cone and support sections, and DMComplexSymmetrize() does not set the chart
- Now DMSetUp() allocates supportSection/supports if sizes have been set
- Added DMCreateCoordinateDM_Complex()
- Added DMComplexCreateSubmesh()
- Added DMComplexSetSupportSize() and DMComplexSetSupport()
- Added DMComplexSetCoordinateSection()
- Added PetscSectionCreateGlobalSectionCensored() so that points can be omitted, like cohesive cells in PyLith
- Fixed conversion of Sieve to DMComplex

Hg-commit: 553898bf8df8d1d80cf90b50d5f4f315d1c3db52

show more ...


/petsc/include/petsc-private/compleximpl.h
/petsc/include/petsc-private/daimpl.h
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petsc-private/threadcommimpl.h
/petsc/include/petsc-private/vecimpl.h
/petsc/include/petscdm.h
/petsc/include/petscdmcomplex.h
/petsc/include/petscdmda.h
/petsc/include/petscsys.h
/petsc/include/petscthreadcomm.h
/petsc/include/sieve/ISieve.hh
/petsc/src/dm/examples/tutorials/ex51.c
/petsc/src/dm/examples/tutorials/ex65dm.c
/petsc/src/dm/examples/tutorials/makefile
/petsc/src/dm/impls/complex/complex.c
/petsc/src/dm/impls/complex/complexcreate.c
/petsc/src/dm/impls/complex/complexexodusii.c
/petsc/src/dm/impls/complex/complexvtk.c
/petsc/src/dm/impls/da/da.c
/petsc/src/dm/impls/da/da2.c
/petsc/src/dm/impls/da/da3.c
/petsc/src/dm/impls/da/dacorn.c
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/da/dadestroy.c
/petsc/src/dm/impls/da/dageometry.c
/petsc/src/dm/impls/da/daview.c
/petsc/src/dm/impls/da/fdda.c
/petsc/src/dm/impls/da/gr1.c
/petsc/src/dm/impls/da/gr2.c
/petsc/src/dm/impls/da/grvtk.c
/petsc/src/dm/impls/mesh/meshcreate.c
/petsc/src/dm/interface/dm.c
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/tex/petscapp.bib
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/ksp/ksp/interface/xmon.c
/petsc/src/snes/examples/tests/ex68.c
/petsc/src/snes/examples/tests/makefile
/petsc/src/snes/examples/tutorials/makefile
/petsc/src/snes/impls/ksponly/ksponly.c
/petsc/src/snes/interface/snesj2.c
/petsc/src/sys/ftn-custom/makefile
/petsc/src/sys/objects/ftn-custom/makefile
/petsc/src/sys/objects/ftn-custom/zstart.c
/petsc/src/sys/objects/ftn-custom/zstartf.c
/petsc/src/sys/objects/tagm.c
/petsc/src/sys/plog/ftn-custom/zplogf.c
/petsc/src/sys/threadcomm/examples/tutorials/ex1.c
/petsc/src/sys/threadcomm/examples/tutorials/ex4.c
/petsc/src/sys/threadcomm/impls/openmp/tcopenmp.c
/petsc/src/sys/threadcomm/impls/pthread/tcpthread.c
/petsc/src/sys/threadcomm/interface/threadcomm.c
/petsc/src/sys/threadcomm/interface/threadcommred.c
/petsc/src/sys/utils/sorti.c
/petsc/src/ts/examples/tutorials/ex1.c
/petsc/src/ts/examples/tutorials/ex10.c
/petsc/src/ts/examples/tutorials/ex2.c
/petsc/src/ts/examples/tutorials/ex3.c
/petsc/src/ts/examples/tutorials/ex8.c
/petsc/src/ts/examples/tutorials/makefile
/petsc/src/ts/examples/tutorials/phasefield/biharmonic.c
/petsc/src/ts/examples/tutorials/phasefield/heat.c
/petsc/src/ts/examples/tutorials/phasefield/makefile
/petsc/src/ts/interface/ts.c
/petsc/src/ts/utils/dmdats.c
/petsc/src/ts/utils/makefile
vec/impls/seq/vsection.c
619ccd9c19-Sep-2012 Barry Smith <bsmith@mcs.anl.gov>

commit after merge

Hg-commit: 8e4a265275ff22baff535c775d8911f084ef2b85

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