#ifndef __DATA_BUCKET_H__ #define __DATA_BUCKET_H__ #include #define DEFAULT -32654789 #define DATAFIELD_POINT_ACCESS_GUARD /* Logging flag */ #define PTAT3D_LOG_DATA_BUCKET typedef enum { DATABUCKET_VIEW_STDOUT=0, DATABUCKET_VIEW_ASCII, DATABUCKET_VIEW_BINARY, DATABUCKET_VIEW_HDF5 } DataBucketViewType; typedef struct _p_DataField* DataField; typedef struct _p_DataBucket* DataBucket; struct _p_DataField { char *registeration_function; int L; PetscBool active; size_t atomic_size; char *name; /* what are they called */ void *data; /* the data - an array of structs */ }; struct _p_DataBucket { int L; /* number in use */ int buffer; /* memory buffer used for re-allocation */ int allocated; /* number allocated, this will equal datafield->L */ PetscBool finalised; /* DEPRECIATED */ int nfields; /* how many fields of this type */ DataField *field; /* the data */ }; #define ERROR() {\ printf("ERROR: %s() from line %d in %s !!\n", __FUNCTION__, __LINE__, __FILE__);\ exit(EXIT_FAILURE);\ } #define __DATATFIELD_point_access(data,index,atomic_size) (void*)((char*)(data) + (index)*(atomic_size)) #define __DATATFIELD_point_access_offset(data,index,atomic_size,offset) (void*)((char*)(data) + (index)*(atomic_size) + (offset)) void StringInList( const char name[], const int N, const DataField gfield[], PetscBool *val ); void StringFindInList( const char name[], const int N, const DataField gfield[], int *index ); void DataFieldCreate( const char registeration_function[], const char name[], const size_t size, const int L, DataField *DF ); void DataFieldDestroy( DataField *DF ); void DataBucketCreate( DataBucket *DB ); void DataBucketDestroy( DataBucket *DB ); void _DataBucketRegisterField( DataBucket db, const char registeration_function[], const char field_name[], size_t atomic_size, DataField *_gfield ); #define DataBucketRegisterField(db,name,size,k) {\ char *location;\ asprintf(&location,"Registered by %s() at line %d within file %s", __FUNCTION__, __LINE__, __FILE__);\ _DataBucketRegisterField( (db), location, (name), (size), (k) );\ free(location);\ } void DataFieldGetNumEntries(DataField df, int *sum); void DataFieldSetSize( DataField df, const int new_L ); void DataFieldZeroBlock( DataField df, const int start, const int end ); void DataFieldGetAccess( const DataField gfield ); void DataFieldAccessPoint( const DataField gfield, const int pid, void **ctx_p ); void DataFieldAccessPointOffset( const DataField gfield, const size_t offset, const int pid, void **ctx_p ); void DataFieldRestoreAccess( DataField gfield ); void DataFieldVerifyAccess( const DataField gfield, const size_t size); void DataFieldGetAtomicSize(const DataField gfield,size_t *size); void DataFieldGetEntries(const DataField gfield,void **data); void DataFieldRestoreEntries(const DataField gfield,void **data); void DataFieldInsertPoint( const DataField field, const int index, const void *ctx ); void DataFieldCopyPoint( const int pid_x, const DataField field_x, const int pid_y, const DataField field_y ); void DataFieldZeroPoint( const DataField field, const int index ); void DataBucketGetDataFieldByName(DataBucket db,const char name[],DataField *gfield); void DataBucketQueryDataFieldByName(DataBucket db,const char name[],PetscBool *found); void DataBucketFinalize(DataBucket db); void DataBucketSetInitialSizes( DataBucket db, const int L, const int buffer ); void DataBucketSetSizes( DataBucket db, const int L, const int buffer ); void DataBucketGetSizes( DataBucket db, int *L, int *buffer, int *allocated ); void DataBucketGetGlobalSizes(MPI_Comm comm, DataBucket db, long int *L, long int *buffer, long int *allocated ); void DataBucketGetDataFields( DataBucket db, int *L, DataField *fields[] ); void DataBucketCopyPoint( const DataBucket xb, const int pid_x, const DataBucket yb, const int pid_y ); void DataBucketCreateFromSubset( DataBucket DBIn, const int N, const int list[], DataBucket *DB ); void DataBucketZeroPoint( const DataBucket db, const int index ); //void DataBucketLoadFromFile(const char filename[], DataBucketViewType type, DataBucket *db); void DataBucketLoadFromFile(MPI_Comm comm,const char filename[], DataBucketViewType type, DataBucket *db); //void DataBucketView(DataBucket db,const char filename[],DataBucketViewType type); void DataBucketView(MPI_Comm comm,DataBucket db,const char filename[],DataBucketViewType type); void DataBucketAddPoint( DataBucket db ); void DataBucketRemovePoint( DataBucket db ); void DataBucketRemovePointAtIndex( const DataBucket db, const int index ); void DataBucketDuplicateFields(DataBucket dbA,DataBucket *dbB); void DataBucketInsertValues(DataBucket db1,DataBucket db2); /* helpers for parallel send/recv */ void DataBucketCreatePackedArray(DataBucket db,size_t *bytes,void **buf); void DataBucketDestroyPackedArray(DataBucket db,void **buf); void DataBucketFillPackedArray(DataBucket db,const int index,void *buf); void DataBucketInsertPackedArray(DataBucket db,const int idx,void *data); #endif